Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136790 | XP_013449674.1 | 90.819 | 403 | 34 | 3 | 1 | 402 | 1 | 401 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136790 | sp|A2BIJ3|BSDC1_DANRE | 25.472 | 212 | 134 | 7 | 45 | 239 | 17 | 221 | 2.34e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136790 | A0A072U1Y0 | 90.819 | 403 | 34 | 3 | 1 | 402 | 1 | 401 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa1136790 | 0.800313 | 1.527951e-48 | -8.615850e-47 |
| Msa0072170 | Msa1136790 | 0.808665 | 2.770637e-50 | -8.615850e-47 |
| Msa0100800 | Msa1136790 | 0.803088 | 4.119524e-49 | -8.615850e-47 |
| Msa0120540 | Msa1136790 | 0.801132 | 1.040212e-48 | -8.615850e-47 |
| Msa0609220 | Msa1136790 | 0.811546 | 6.632054e-51 | -8.615850e-47 |
| Msa0615680 | Msa1136790 | 0.815048 | 1.128739e-51 | -8.615850e-47 |
| Msa0618200 | Msa1136790 | -0.820752 | 5.810998e-53 | -8.615850e-47 |
| Msa0630950 | Msa1136790 | 0.826180 | 3.124941e-54 | -8.615850e-47 |
| Msa0669190 | Msa1136790 | 0.818330 | 2.074232e-52 | -8.615850e-47 |
| Msa0712310 | Msa1136790 | 0.810916 | 9.086414e-51 | -8.615850e-47 |
| Msa0752620 | Msa1136790 | 0.806663 | 7.375688e-50 | -8.615850e-47 |
| Msa0795010 | Msa1136790 | 0.814247 | 1.697719e-51 | -8.615850e-47 |
| Msa0795030 | Msa1136790 | 0.823518 | 1.326706e-53 | -8.615850e-47 |
| Msa0830990 | Msa1136790 | 0.812742 | 3.637589e-51 | -8.615850e-47 |
| Msa0127040 | Msa1136790 | 0.817163 | 3.801841e-52 | -8.615850e-47 |
| Msa0145150 | Msa1136790 | 0.813133 | 2.986224e-51 | -8.615850e-47 |
| Msa0193600 | Msa1136790 | 0.849316 | 3.496712e-60 | -8.615850e-47 |
| Msa0197530 | Msa1136790 | 0.812717 | 3.683470e-51 | -8.615850e-47 |
| Msa0223920 | Msa1136790 | 0.810219 | 1.285310e-50 | -8.615850e-47 |
| Msa0224150 | Msa1136790 | 0.802833 | 4.649758e-49 | -8.615850e-47 |
| Msa0229360 | Msa1136790 | 0.808410 | 3.139733e-50 | -8.615850e-47 |
| Msa0387910 | Msa1136790 | 0.823968 | 1.040676e-53 | -8.615850e-47 |
| Msa0421260 | Msa1136790 | 0.809600 | 1.746229e-50 | -8.615850e-47 |
| Msa0436190 | Msa1136790 | 0.836970 | 6.849243e-57 | -8.615850e-47 |
| Msa0436200 | Msa1136790 | 0.814847 | 1.250506e-51 | -8.615850e-47 |
| Msa0436920 | Msa1136790 | -0.819495 | 1.127369e-52 | -8.615850e-47 |
| Msa0442310 | Msa1136790 | 0.806304 | 8.777177e-50 | -8.615850e-47 |
| Msa0465960 | Msa1136790 | 0.810970 | 8.842473e-51 | -8.615850e-47 |
| Msa0467220 | Msa1136790 | 0.806185 | 9.301593e-50 | -8.615850e-47 |
| Msa1030930 | Msa1136790 | 0.808219 | 3.448519e-50 | -8.615850e-47 |
| Msa1036740 | Msa1136790 | 0.835706 | 1.435145e-56 | -8.615850e-47 |
| Msa1070050 | Msa1136790 | 0.807935 | 3.964454e-50 | -8.615850e-47 |
| Msa1070390 | Msa1136790 | 0.818186 | 2.235293e-52 | -8.615850e-47 |
| Msa1088290 | Msa1136790 | 0.807857 | 4.117655e-50 | -8.615850e-47 |
| Msa1089270 | Msa1136790 | 0.808182 | 3.511483e-50 | -8.615850e-47 |
| Msa1098720 | Msa1136790 | -0.818849 | 1.581760e-52 | -8.615850e-47 |
| Msa0239060 | Msa1136790 | 0.833233 | 5.998321e-56 | -8.615850e-47 |
| Msa0262480 | Msa1136790 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa0265160 | Msa1136790 | 0.817230 | 3.672677e-52 | -8.615850e-47 |
| Msa0273650 | Msa1136790 | 0.847528 | 1.092651e-59 | -8.615850e-47 |
| Msa0276950 | Msa1136790 | 0.801867 | 7.353399e-49 | -8.615850e-47 |
| Msa0296920 | Msa1136790 | 0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa0303160 | Msa1136790 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0335320 | Msa1136790 | -0.811148 | 8.091703e-51 | -8.615850e-47 |
| Msa1113880 | Msa1136790 | 0.802625 | 5.132415e-49 | -8.615850e-47 |
| Msa1125790 | Msa1136790 | -0.815056 | 1.123850e-51 | -8.615850e-47 |
| Msa1136790 | Msa1172130 | -0.815190 | 1.049695e-51 | -8.615850e-47 |
| Msa1136790 | Msa1211000 | 0.805107 | 1.566228e-49 | -8.615850e-47 |
| Msa1136790 | Msa1253810 | 0.803295 | 3.732823e-49 | -8.615850e-47 |
| Msa1136790 | Msa1296300 | 0.809762 | 1.611943e-50 | -8.615850e-47 |
| Msa1136790 | Msa1335560 | 0.831125 | 1.993460e-55 | -8.615850e-47 |
| Msa1136790 | Msa1338610 | 0.811152 | 8.076454e-51 | -8.615850e-47 |
| Msa1136790 | Msa1364060 | 0.864722 | 9.912118e-65 | -8.615850e-47 |
| Msa1136790 | Msa1364160 | 0.808712 | 2.706158e-50 | -8.615850e-47 |
| Msa1136790 | Msa1398170 | 0.880484 | 5.285760e-70 | -8.615850e-47 |
| Msa1136790 | Msa1421900 | 0.811453 | 6.949251e-51 | -8.615850e-47 |
| Msa1136790 | Msa1438450 | 0.819864 | 9.285081e-53 | -8.615850e-47 |
| Msa0524590 | Msa1136790 | 0.811466 | 6.904969e-51 | -8.615850e-47 |
| Msa0524600 | Msa1136790 | 0.805415 | 1.349677e-49 | -8.615850e-47 |
| Msa0534410 | Msa1136790 | 0.843031 | 1.798574e-58 | -8.615850e-47 |
| Msa0582280 | Msa1136790 | 0.820394 | 7.020743e-53 | -8.615850e-47 |
| Msa0590650 | Msa1136790 | 0.835553 | 1.568886e-56 | -8.615850e-47 |
| Msa0869010 | Msa1136790 | 0.805887 | 1.074598e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136790 | MtrunA17_Chr7g0259331 | 90.819 | 403 | 34 | 3 | 1 | 402 | 1 | 401 | 0.0 | 630 |
| Msa1136790 | MtrunA17_Chr1g0196521 | 49.574 | 470 | 158 | 14 | 1 | 402 | 1 | 459 | 2.67e-109 | 328 |
| Msa1136790 | MtrunA17_Chr2g0287041 | 38.307 | 449 | 185 | 13 | 1 | 396 | 1 | 410 | 1.43e-68 | 222 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1136790 | AT1G03350.1 | 42.641 | 462 | 186 | 12 | 1 | 390 | 1 | 455 | 7.48e-97 | 297 |
| Msa1136790 | AT4G13110.1 | 45.291 | 223 | 95 | 3 | 41 | 244 | 25 | 239 | 1.60e-50 | 172 |
Find 96 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGAAGAGGTGGATGATTT+TGG | 0.211405 | 7_4:+5540982 | Msa1136790:CDS |
| GTGAAAAGAACAATAGTTTA+TGG | 0.221360 | 7_4:+5541022 | Msa1136790:CDS |
| TTCGGAAACACCGTGATTAA+AGG | 0.270210 | 7_4:+5540478 | Msa1136790:CDS |
| ATATTATTATAAGGTTTATA+AGG | 0.296101 | 7_4:+5540828 | Msa1136790:CDS |
| TGGTTCCTAATGTTGTTGAT+AGG | 0.315634 | 7_4:+5540788 | Msa1136790:CDS |
| ATCAAAAGTTGATGAGCATT+TGG | 0.347807 | 7_4:+5541065 | Msa1136790:CDS |
| TAATCACGGTGTTTCCGAAT+TGG | 0.350294 | 7_4:-5540474 | None:intergenic |
| GGAGGAAGCGGTGTTTGTTT+CGG | 0.354236 | 7_4:-5540257 | None:intergenic |
| GTGGGATTGAACGGCACGTT+TGG | 0.387195 | 7_4:-5540289 | None:intergenic |
| TTGGTTGAGATATTATTATA+AGG | 0.389321 | 7_4:+5540819 | Msa1136790:CDS |
| GTTTCCCTATCAACAACATT+AGG | 0.391217 | 7_4:-5540793 | None:intergenic |
| GTTTCGGATCCTGATGGGTC+CGG | 0.392773 | 7_4:-5540241 | None:intergenic |
| GTATATTTCGATGACGGATT+CGG | 0.397326 | 7_4:-5540362 | None:intergenic |
| GAAAAGAAGGCAATGAGATT+GGG | 0.398844 | 7_4:+5541279 | Msa1136790:CDS |
| TCGAATCAGATTCTGATTCA+AGG | 0.403786 | 7_4:-5540537 | None:intergenic |
| AAGAAGAAGAAGATTTGAGT+TGG | 0.406673 | 7_4:+5541355 | Msa1136790:CDS |
| GGAAAAGAAGGCAATGAGAT+TGG | 0.407669 | 7_4:+5541278 | Msa1136790:CDS |
| AGAAGAAGAAGATTTGAGTT+GGG | 0.413686 | 7_4:+5541356 | Msa1136790:CDS |
| GTTAAGAGAGAATGATGAAA+TGG | 0.416221 | 7_4:+5540747 | Msa1136790:CDS |
| AAATGGAGAGTGTATTTAGA+AGG | 0.417338 | 7_4:+5540764 | Msa1136790:CDS |
| GTGTTTGTTTCGGATCCTGA+TGG | 0.427915 | 7_4:-5540247 | None:intergenic |
| GCGGTATAATAAGTGGAAGT+TGG | 0.440753 | 7_4:+5540684 | Msa1136790:CDS |
| GCAAAATTGATTTGCGGAAG+CGG | 0.446892 | 7_4:+5541316 | Msa1136790:CDS |
| GGAGAGTGTATTTAGAAGGT+TGG | 0.446991 | 7_4:+5540768 | Msa1136790:CDS |
| AGAGGATGAGGACTTGAGTT+GGG | 0.453903 | 7_4:+5540903 | Msa1136790:CDS |
| GAAACGAATGTCGAGGGAAG+AGG | 0.455231 | 7_4:+5540885 | Msa1136790:CDS |
| TTTCGGATCCTGATGGGTCC+GGG | 0.456592 | 7_4:-5540240 | None:intergenic |
| CGTCGCGATCTTCATGAATT+CGG | 0.457351 | 7_4:+5540385 | Msa1136790:CDS |
| CGGCACGTTTGGCGAGTCGC+TGG | 0.457531 | 7_4:-5540278 | None:intergenic |
| AAGAGGATGAGGACTTGAGT+TGG | 0.459371 | 7_4:+5540902 | Msa1136790:CDS |
| GAGATTGAGTAATGTGGAAG+AGG | 0.460129 | 7_4:+5540969 | Msa1136790:CDS |
| GCTCAAATTCGTGCAATTCA+AGG | 0.465155 | 7_4:+5540622 | Msa1136790:CDS |
| TTATACCGCTCCAAATCAAA+AGG | 0.467584 | 7_4:-5540670 | None:intergenic |
| GGTTCCTAATGTTGTTGATA+GGG | 0.469145 | 7_4:+5540789 | Msa1136790:CDS |
| AATAAATCTCAAGCCTTGGC+AGG | 0.469300 | 7_4:-5541402 | None:intergenic |
| TGGCGAGTCGCTGGAGGAAG+CGG | 0.470447 | 7_4:-5540269 | None:intergenic |
| CACGTGCCGGTGGGATTGAA+CGG | 0.481249 | 7_4:-5540298 | None:intergenic |
| ATTTGGAGCGGTATAATAAG+TGG | 0.482337 | 7_4:+5540677 | Msa1136790:CDS |
| TGACAATGGAGAAGAATGTC+GGG | 0.483635 | 7_4:+5541163 | Msa1136790:CDS |
| GCCGATGTTCTTCCACGTGC+CGG | 0.493880 | 7_4:-5540311 | None:intergenic |
| GGACACGTCATTGACCAATT+CGG | 0.509999 | 7_4:+5540460 | Msa1136790:CDS |
| TTTATCCACTTGGCTTCCAT+CGG | 0.511757 | 7_4:-5541106 | None:intergenic |
| AATGTCGAGGGAAGAGGATG+AGG | 0.511956 | 7_4:+5540891 | Msa1136790:CDS |
| TGTTTGTTTCGGATCCTGAT+GGG | 0.511966 | 7_4:-5540246 | None:intergenic |
| GCTTGAGTGGGATGAGATTG+AGG | 0.513354 | 7_4:+5541239 | Msa1136790:CDS |
| AAAAGAAGGCAATGAGATTG+GGG | 0.517259 | 7_4:+5541280 | Msa1136790:CDS |
| AATCCTTCGCTTTATCCACT+TGG | 0.517564 | 7_4:-5541116 | None:intergenic |
| TAGTAGCAATGAGGAAAAGA+AGG | 0.522851 | 7_4:+5541266 | Msa1136790:CDS |
| GCCCAAGCAAAATTGATTTG+CGG | 0.523784 | 7_4:+5541310 | Msa1136790:CDS |
| TTTATGGCAAAACAAGATGA+TGG | 0.527238 | 7_4:+5541038 | Msa1136790:CDS |
| GTATAATAAATCTCAAGCCT+TGG | 0.537750 | 7_4:-5541406 | None:intergenic |
| TCCGACGACCCGGACCCATC+AGG | 0.538011 | 7_4:+5540232 | Msa1136790:CDS |
| GATCTTCATGAATTCGGCAC+AGG | 0.539054 | 7_4:+5540391 | Msa1136790:CDS |
| TTTGGATGTTGTTCAAGAGA+AGG | 0.539257 | 7_4:+5541083 | Msa1136790:CDS |
| ATTGAGTAATGTGGAAGAGG+TGG | 0.540140 | 7_4:+5540972 | Msa1136790:CDS |
| CTGATTCGAAGAAGAAGAAG+AGG | 0.540578 | 7_4:+5540551 | Msa1136790:CDS |
| ATTCGGCACAGGTTTGAAGA+AGG | 0.541645 | 7_4:+5540402 | Msa1136790:CDS |
| GGTAAGTCAGAACTCTGAGC+AGG | 0.548440 | 7_4:+5541203 | Msa1136790:CDS |
| ATGGAGAAGAATGTCGGGGA+TGG | 0.549119 | 7_4:+5541168 | Msa1136790:CDS |
| GGCAACCTAATCAAAACCTT+CGG | 0.549557 | 7_4:+5540331 | Msa1136790:CDS |
| GATGTTCTTCCACGTGCCGG+TGG | 0.551346 | 7_4:-5540308 | None:intergenic |
| TTGGTCAATGACGTGTCCAA+CGG | 0.553179 | 7_4:-5540455 | None:intergenic |
| CTGAGCCGTTCCTTTAATCA+CGG | 0.557516 | 7_4:-5540488 | None:intergenic |
| CACGACTCTCTCGAAACCGT+TGG | 0.558594 | 7_4:+5540439 | Msa1136790:CDS |
| ATGTTCTTCCACGTGCCGGT+GGG | 0.564459 | 7_4:-5540307 | None:intergenic |
| GTGACAATGGAGAAGAATGT+CGG | 0.570801 | 7_4:+5541162 | Msa1136790:CDS |
| AAGTCAGAACTCTGAGCAGG+AGG | 0.571371 | 7_4:+5541206 | Msa1136790:CDS |
| AAGAGGATTAAGAAACAGAG+TGG | 0.572235 | 7_4:+5540568 | Msa1136790:CDS |
| CACGTTTGGCGAGTCGCTGG+AGG | 0.588279 | 7_4:-5540275 | None:intergenic |
| AGTCAGAACTCTGAGCAGGA+GGG | 0.591570 | 7_4:+5541207 | Msa1136790:CDS |
| AAGGCAATGAGATTGGGGAG+TGG | 0.594208 | 7_4:+5541285 | Msa1136790:CDS |
| GTCAGAACTCTGAGCAGGAG+GGG | 0.595465 | 7_4:+5541208 | Msa1136790:CDS |
| TTAAGAAAGCTGAGGATGTG+AGG | 0.599039 | 7_4:+5540851 | Msa1136790:CDS |
| GATGAGGAGTATGAAGATGA+TGG | 0.606982 | 7_4:+5540934 | Msa1136790:CDS |
| AACGTGCCGTTCAATCCCAC+CGG | 0.612627 | 7_4:+5540292 | Msa1136790:CDS |
| TTCTGATAAGAAAGTGACAA+TGG | 0.614400 | 7_4:+5541149 | Msa1136790:CDS |
| CGTTCAATCCCACCGGCACG+TGG | 0.618792 | 7_4:+5540299 | Msa1136790:CDS |
| TAAGAAAGCTGAGGATGTGA+GGG | 0.620596 | 7_4:+5540852 | Msa1136790:CDS |
| GTTGTTCAAGAGAAGGCCGA+TGG | 0.623363 | 7_4:+5541090 | Msa1136790:CDS |
| AGCTCGTGAAACGAATGTCG+AGG | 0.623979 | 7_4:+5540878 | Msa1136790:CDS |
| AAACACCGTGATTAAAGGAA+CGG | 0.625585 | 7_4:+5540483 | Msa1136790:CDS |
| GCGACGGTATATTTCGATGA+CGG | 0.630669 | 7_4:-5540368 | None:intergenic |
| TTATAAGGTTAAGAAAGCTG+AGG | 0.632810 | 7_4:+5540843 | Msa1136790:CDS |
| AAGCCAAGTGGATAAAGCGA+AGG | 0.635396 | 7_4:+5541113 | Msa1136790:CDS |
| GAGTTGGGATGTTGAAGATG+AGG | 0.640727 | 7_4:+5540918 | Msa1136790:CDS |
| TGATAAGAGATTGAGTAATG+TGG | 0.641001 | 7_4:+5540963 | Msa1136790:CDS |
| GGATAAAGCGAAGGATTCTG+TGG | 0.643867 | 7_4:+5541122 | Msa1136790:CDS |
| GCTCGTGAAACGAATGTCGA+GGG | 0.648458 | 7_4:+5540879 | Msa1136790:CDS |
| TGATGATGATGAGCCTGCCA+AGG | 0.653151 | 7_4:+5541389 | Msa1136790:CDS |
| CGGGGATGGAAAGTCTTCAG+AGG | 0.655419 | 7_4:+5541182 | Msa1136790:CDS |
| ACCGGCACGTGGAAGAACAT+CGG | 0.661066 | 7_4:+5540310 | Msa1136790:CDS |
| GAAGGCCGATGGAAGCCAAG+TGG | 0.667743 | 7_4:+5541101 | Msa1136790:CDS |
| ATGGCAAAACAAGATGATGG+AGG | 0.669587 | 7_4:+5541041 | Msa1136790:CDS |
| TGAGGATCTTAGTAGCAATG+AGG | 0.687708 | 7_4:+5541257 | Msa1136790:CDS |
| CGAATTCATGAAGATCGCGA+CGG | 0.695393 | 7_4:-5540384 | None:intergenic |
| GACAATGGAGAAGAATGTCG+GGG | 0.696218 | 7_4:+5541164 | Msa1136790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATTATAAGGTTTATA+AGG | + | chr7_4:5540828-5540847 | Msa1136790:CDS | 10.0% |
| !! | ATATTATTATAAGGTTTATA+AGG | + | chr7_4:5540828-5540847 | Msa1136790:CDS | 10.0% |
| !! | TTGGTTGAGATATTATTATA+AGG | + | chr7_4:5540819-5540838 | Msa1136790:CDS | 20.0% |
| !! | TTGGTTGAGATATTATTATA+AGG | + | chr7_4:5540819-5540838 | Msa1136790:CDS | 20.0% |
| ! | GTGAAAAGAACAATAGTTTA+TGG | + | chr7_4:5541022-5541041 | Msa1136790:CDS | 25.0% |
| ! | GTGAAAAGAACAATAGTTTA+TGG | + | chr7_4:5541022-5541041 | Msa1136790:CDS | 25.0% |
| !! | TACAGAAGAACCTTTTGATT+TGG | + | chr7_4:5540660-5540679 | Msa1136790:CDS | 30.0% |
| GTTAAGAGAGAATGATGAAA+TGG | + | chr7_4:5540747-5540766 | Msa1136790:CDS | 30.0% | |
| ! | AAATGGAGAGTGTATTTAGA+AGG | + | chr7_4:5540764-5540783 | Msa1136790:CDS | 30.0% |
| !! | TTGTTGATAGGGAAACTTTT+TGG | + | chr7_4:5540800-5540819 | Msa1136790:CDS | 30.0% |
| TTATAAGGTTAAGAAAGCTG+AGG | + | chr7_4:5540843-5540862 | Msa1136790:CDS | 30.0% | |
| TGATAAGAGATTGAGTAATG+TGG | + | chr7_4:5540963-5540982 | Msa1136790:CDS | 30.0% | |
| TTTATGGCAAAACAAGATGA+TGG | + | chr7_4:5541038-5541057 | Msa1136790:CDS | 30.0% | |
| !! | ATCAAAAGTTGATGAGCATT+TGG | + | chr7_4:5541065-5541084 | Msa1136790:CDS | 30.0% |
| TTCTGATAAGAAAGTGACAA+TGG | + | chr7_4:5541149-5541168 | Msa1136790:CDS | 30.0% | |
| AAGAAGAAGAAGATTTGAGT+TGG | + | chr7_4:5541355-5541374 | Msa1136790:CDS | 30.0% | |
| ! | AGAAGAAGAAGATTTGAGTT+GGG | + | chr7_4:5541356-5541375 | Msa1136790:CDS | 30.0% |
| !! | TACAGAAGAACCTTTTGATT+TGG | + | chr7_4:5540660-5540679 | Msa1136790:CDS | 30.0% |
| GTTAAGAGAGAATGATGAAA+TGG | + | chr7_4:5540747-5540766 | Msa1136790:CDS | 30.0% | |
| ! | AAATGGAGAGTGTATTTAGA+AGG | + | chr7_4:5540764-5540783 | Msa1136790:CDS | 30.0% |
| !! | TTGTTGATAGGGAAACTTTT+TGG | + | chr7_4:5540800-5540819 | Msa1136790:CDS | 30.0% |
| TTATAAGGTTAAGAAAGCTG+AGG | + | chr7_4:5540843-5540862 | Msa1136790:CDS | 30.0% | |
| TGATAAGAGATTGAGTAATG+TGG | + | chr7_4:5540963-5540982 | Msa1136790:CDS | 30.0% | |
| TTTATGGCAAAACAAGATGA+TGG | + | chr7_4:5541038-5541057 | Msa1136790:CDS | 30.0% | |
| !! | ATCAAAAGTTGATGAGCATT+TGG | + | chr7_4:5541065-5541084 | Msa1136790:CDS | 30.0% |
| TTCTGATAAGAAAGTGACAA+TGG | + | chr7_4:5541149-5541168 | Msa1136790:CDS | 30.0% | |
| AAGAAGAAGAAGATTTGAGT+TGG | + | chr7_4:5541355-5541374 | Msa1136790:CDS | 30.0% | |
| ! | AGAAGAAGAAGATTTGAGTT+GGG | + | chr7_4:5541356-5541375 | Msa1136790:CDS | 30.0% |
| !! | GTATATTTCGATGACGGATT+CGG | - | chr7_4:5540365-5540384 | None:intergenic | 35.0% |
| AAACACCGTGATTAAAGGAA+CGG | + | chr7_4:5540483-5540502 | Msa1136790:CDS | 35.0% | |
| TCGAATCAGATTCTGATTCA+AGG | - | chr7_4:5540540-5540559 | None:intergenic | 35.0% | |
| AAGAGGATTAAGAAACAGAG+TGG | + | chr7_4:5540568-5540587 | Msa1136790:CDS | 35.0% | |
| !!! | AAGAACCTTTTGATTTGGAG+CGG | + | chr7_4:5540665-5540684 | Msa1136790:CDS | 35.0% |
| TTATACCGCTCCAAATCAAA+AGG | - | chr7_4:5540673-5540692 | None:intergenic | 35.0% | |
| ! | ATTTGGAGCGGTATAATAAG+TGG | + | chr7_4:5540677-5540696 | Msa1136790:CDS | 35.0% |
| TGGTTCCTAATGTTGTTGAT+AGG | + | chr7_4:5540788-5540807 | Msa1136790:CDS | 35.0% | |
| GGTTCCTAATGTTGTTGATA+GGG | + | chr7_4:5540789-5540808 | Msa1136790:CDS | 35.0% | |
| GTTTCCCTATCAACAACATT+AGG | - | chr7_4:5540796-5540815 | None:intergenic | 35.0% | |
| TTTGGATGTTGTTCAAGAGA+AGG | + | chr7_4:5541083-5541102 | Msa1136790:CDS | 35.0% | |
| TAGTAGCAATGAGGAAAAGA+AGG | + | chr7_4:5541266-5541285 | Msa1136790:CDS | 35.0% | |
| GAAAAGAAGGCAATGAGATT+GGG | + | chr7_4:5541279-5541298 | Msa1136790:CDS | 35.0% | |
| AAAAGAAGGCAATGAGATTG+GGG | + | chr7_4:5541280-5541299 | Msa1136790:CDS | 35.0% | |
| ! | TCCGCAAATCAATTTTGCTT+GGG | - | chr7_4:5541314-5541333 | None:intergenic | 35.0% |
| ! | TTCCGCAAATCAATTTTGCT+TGG | - | chr7_4:5541315-5541334 | None:intergenic | 35.0% |
| !! | GTATATTTCGATGACGGATT+CGG | - | chr7_4:5540365-5540384 | None:intergenic | 35.0% |
| AAACACCGTGATTAAAGGAA+CGG | + | chr7_4:5540483-5540502 | Msa1136790:CDS | 35.0% | |
| TCGAATCAGATTCTGATTCA+AGG | - | chr7_4:5540540-5540559 | None:intergenic | 35.0% | |
| AAGAGGATTAAGAAACAGAG+TGG | + | chr7_4:5540568-5540587 | Msa1136790:CDS | 35.0% | |
| !!! | AAGAACCTTTTGATTTGGAG+CGG | + | chr7_4:5540665-5540684 | Msa1136790:CDS | 35.0% |
| TTATACCGCTCCAAATCAAA+AGG | - | chr7_4:5540673-5540692 | None:intergenic | 35.0% | |
| ! | ATTTGGAGCGGTATAATAAG+TGG | + | chr7_4:5540677-5540696 | Msa1136790:CDS | 35.0% |
| TGGTTCCTAATGTTGTTGAT+AGG | + | chr7_4:5540788-5540807 | Msa1136790:CDS | 35.0% | |
| GGTTCCTAATGTTGTTGATA+GGG | + | chr7_4:5540789-5540808 | Msa1136790:CDS | 35.0% | |
| GTTTCCCTATCAACAACATT+AGG | - | chr7_4:5540796-5540815 | None:intergenic | 35.0% | |
| TTTGGATGTTGTTCAAGAGA+AGG | + | chr7_4:5541083-5541102 | Msa1136790:CDS | 35.0% | |
| TAGTAGCAATGAGGAAAAGA+AGG | + | chr7_4:5541266-5541285 | Msa1136790:CDS | 35.0% | |
| GAAAAGAAGGCAATGAGATT+GGG | + | chr7_4:5541279-5541298 | Msa1136790:CDS | 35.0% | |
| AAAAGAAGGCAATGAGATTG+GGG | + | chr7_4:5541280-5541299 | Msa1136790:CDS | 35.0% | |
| ! | TCCGCAAATCAATTTTGCTT+GGG | - | chr7_4:5541314-5541333 | None:intergenic | 35.0% |
| ! | TTCCGCAAATCAATTTTGCT+TGG | - | chr7_4:5541315-5541334 | None:intergenic | 35.0% |
| TGTTTGTTTCGGATCCTGAT+GGG | - | chr7_4:5540249-5540268 | None:intergenic | 40.0% | |
| GGCAACCTAATCAAAACCTT+CGG | + | chr7_4:5540331-5540350 | Msa1136790:CDS | 40.0% | |
| !!! | TTTCGCCGAAGGTTTTGATT+AGG | - | chr7_4:5540339-5540358 | None:intergenic | 40.0% |
| TAATCACGGTGTTTCCGAAT+TGG | - | chr7_4:5540477-5540496 | None:intergenic | 40.0% | |
| TTCGGAAACACCGTGATTAA+AGG | + | chr7_4:5540478-5540497 | Msa1136790:CDS | 40.0% | |
| ! | CTGATTCGAAGAAGAAGAAG+AGG | + | chr7_4:5540551-5540570 | Msa1136790:CDS | 40.0% |
| GCTCAAATTCGTGCAATTCA+AGG | + | chr7_4:5540622-5540641 | Msa1136790:CDS | 40.0% | |
| GCGGTATAATAAGTGGAAGT+TGG | + | chr7_4:5540684-5540703 | Msa1136790:CDS | 40.0% | |
| ! | AAGTTGGAGTTTTCGTTGGA+AGG | + | chr7_4:5540700-5540719 | Msa1136790:CDS | 40.0% |
| ! | AGTTGGAGTTTTCGTTGGAA+GGG | + | chr7_4:5540701-5540720 | Msa1136790:CDS | 40.0% |
| ! | GTTTTCGTTGGAAGGGAAAA+AGG | + | chr7_4:5540708-5540727 | Msa1136790:CDS | 40.0% |
| GGAAGGGAAAAAGGATGAAA+TGG | + | chr7_4:5540717-5540736 | Msa1136790:CDS | 40.0% | |
| ! | GGAGAGTGTATTTAGAAGGT+TGG | + | chr7_4:5540768-5540787 | Msa1136790:CDS | 40.0% |
| TTAAGAAAGCTGAGGATGTG+AGG | + | chr7_4:5540851-5540870 | Msa1136790:CDS | 40.0% | |
| TAAGAAAGCTGAGGATGTGA+GGG | + | chr7_4:5540852-5540871 | Msa1136790:CDS | 40.0% | |
| ! | GATGAGGAGTATGAAGATGA+TGG | + | chr7_4:5540934-5540953 | Msa1136790:CDS | 40.0% |
| GAGATTGAGTAATGTGGAAG+AGG | + | chr7_4:5540969-5540988 | Msa1136790:CDS | 40.0% | |
| ATTGAGTAATGTGGAAGAGG+TGG | + | chr7_4:5540972-5540991 | Msa1136790:CDS | 40.0% | |
| ! | AAGAGGTGGATGATTTTGGA+GGG | + | chr7_4:5540986-5541005 | Msa1136790:CDS | 40.0% |
| ! | ATGGCAAAACAAGATGATGG+AGG | + | chr7_4:5541041-5541060 | Msa1136790:CDS | 40.0% |
| TTTATCCACTTGGCTTCCAT+CGG | - | chr7_4:5541109-5541128 | None:intergenic | 40.0% | |
| AATCCTTCGCTTTATCCACT+TGG | - | chr7_4:5541119-5541138 | None:intergenic | 40.0% | |
| GTGACAATGGAGAAGAATGT+CGG | + | chr7_4:5541162-5541181 | Msa1136790:CDS | 40.0% | |
| TGACAATGGAGAAGAATGTC+GGG | + | chr7_4:5541163-5541182 | Msa1136790:CDS | 40.0% | |
| TGAGGATCTTAGTAGCAATG+AGG | + | chr7_4:5541257-5541276 | Msa1136790:CDS | 40.0% | |
| GGAAAAGAAGGCAATGAGAT+TGG | + | chr7_4:5541278-5541297 | Msa1136790:CDS | 40.0% | |
| !! | GCCCAAGCAAAATTGATTTG+CGG | + | chr7_4:5541310-5541329 | Msa1136790:CDS | 40.0% |
| !! | GCAAAATTGATTTGCGGAAG+CGG | + | chr7_4:5541316-5541335 | Msa1136790:CDS | 40.0% |
| TGTTTGTTTCGGATCCTGAT+GGG | - | chr7_4:5540249-5540268 | None:intergenic | 40.0% | |
| GGCAACCTAATCAAAACCTT+CGG | + | chr7_4:5540331-5540350 | Msa1136790:CDS | 40.0% | |
| !!! | TTTCGCCGAAGGTTTTGATT+AGG | - | chr7_4:5540339-5540358 | None:intergenic | 40.0% |
| TAATCACGGTGTTTCCGAAT+TGG | - | chr7_4:5540477-5540496 | None:intergenic | 40.0% | |
| TTCGGAAACACCGTGATTAA+AGG | + | chr7_4:5540478-5540497 | Msa1136790:CDS | 40.0% | |
| ! | CTGATTCGAAGAAGAAGAAG+AGG | + | chr7_4:5540551-5540570 | Msa1136790:CDS | 40.0% |
| GCTCAAATTCGTGCAATTCA+AGG | + | chr7_4:5540622-5540641 | Msa1136790:CDS | 40.0% | |
| GCGGTATAATAAGTGGAAGT+TGG | + | chr7_4:5540684-5540703 | Msa1136790:CDS | 40.0% | |
| ! | AAGTTGGAGTTTTCGTTGGA+AGG | + | chr7_4:5540700-5540719 | Msa1136790:CDS | 40.0% |
| ! | AGTTGGAGTTTTCGTTGGAA+GGG | + | chr7_4:5540701-5540720 | Msa1136790:CDS | 40.0% |
| ! | GTTTTCGTTGGAAGGGAAAA+AGG | + | chr7_4:5540708-5540727 | Msa1136790:CDS | 40.0% |
| GGAAGGGAAAAAGGATGAAA+TGG | + | chr7_4:5540717-5540736 | Msa1136790:CDS | 40.0% | |
| ! | GGAGAGTGTATTTAGAAGGT+TGG | + | chr7_4:5540768-5540787 | Msa1136790:CDS | 40.0% |
| TTAAGAAAGCTGAGGATGTG+AGG | + | chr7_4:5540851-5540870 | Msa1136790:CDS | 40.0% | |
| TAAGAAAGCTGAGGATGTGA+GGG | + | chr7_4:5540852-5540871 | Msa1136790:CDS | 40.0% | |
| ! | GATGAGGAGTATGAAGATGA+TGG | + | chr7_4:5540934-5540953 | Msa1136790:CDS | 40.0% |
| GAGATTGAGTAATGTGGAAG+AGG | + | chr7_4:5540969-5540988 | Msa1136790:CDS | 40.0% | |
| ATTGAGTAATGTGGAAGAGG+TGG | + | chr7_4:5540972-5540991 | Msa1136790:CDS | 40.0% | |
| ! | AAGAGGTGGATGATTTTGGA+GGG | + | chr7_4:5540986-5541005 | Msa1136790:CDS | 40.0% |
| ! | ATGGCAAAACAAGATGATGG+AGG | + | chr7_4:5541041-5541060 | Msa1136790:CDS | 40.0% |
| TTTATCCACTTGGCTTCCAT+CGG | - | chr7_4:5541109-5541128 | None:intergenic | 40.0% | |
| AATCCTTCGCTTTATCCACT+TGG | - | chr7_4:5541119-5541138 | None:intergenic | 40.0% | |
| GTGACAATGGAGAAGAATGT+CGG | + | chr7_4:5541162-5541181 | Msa1136790:CDS | 40.0% | |
| TGACAATGGAGAAGAATGTC+GGG | + | chr7_4:5541163-5541182 | Msa1136790:CDS | 40.0% | |
| TGAGGATCTTAGTAGCAATG+AGG | + | chr7_4:5541257-5541276 | Msa1136790:CDS | 40.0% | |
| GGAAAAGAAGGCAATGAGAT+TGG | + | chr7_4:5541278-5541297 | Msa1136790:CDS | 40.0% | |
| !! | GCCCAAGCAAAATTGATTTG+CGG | + | chr7_4:5541310-5541329 | Msa1136790:CDS | 40.0% |
| !! | GCAAAATTGATTTGCGGAAG+CGG | + | chr7_4:5541316-5541335 | Msa1136790:CDS | 40.0% |
| GTGTTTGTTTCGGATCCTGA+TGG | - | chr7_4:5540250-5540269 | None:intergenic | 45.0% | |
| GCGACGGTATATTTCGATGA+CGG | - | chr7_4:5540371-5540390 | None:intergenic | 45.0% | |
| CGAATTCATGAAGATCGCGA+CGG | - | chr7_4:5540387-5540406 | None:intergenic | 45.0% | |
| CGTCGCGATCTTCATGAATT+CGG | + | chr7_4:5540385-5540404 | Msa1136790:CDS | 45.0% | |
| GATCTTCATGAATTCGGCAC+AGG | + | chr7_4:5540391-5540410 | Msa1136790:CDS | 45.0% | |
| ATTCGGCACAGGTTTGAAGA+AGG | + | chr7_4:5540402-5540421 | Msa1136790:CDS | 45.0% | |
| TTGGTCAATGACGTGTCCAA+CGG | - | chr7_4:5540458-5540477 | None:intergenic | 45.0% | |
| GGACACGTCATTGACCAATT+CGG | + | chr7_4:5540460-5540479 | Msa1136790:CDS | 45.0% | |
| CTGAGCCGTTCCTTTAATCA+CGG | - | chr7_4:5540491-5540510 | None:intergenic | 45.0% | |
| ! | GTGGAAGTTGGAGTTTTCGT+TGG | + | chr7_4:5540696-5540715 | Msa1136790:CDS | 45.0% |
| AAGAGGATGAGGACTTGAGT+TGG | + | chr7_4:5540902-5540921 | Msa1136790:CDS | 45.0% | |
| AGAGGATGAGGACTTGAGTT+GGG | + | chr7_4:5540903-5540922 | Msa1136790:CDS | 45.0% | |
| GAGTTGGGATGTTGAAGATG+AGG | + | chr7_4:5540918-5540937 | Msa1136790:CDS | 45.0% | |
| ! | GTGGAAGAGGTGGATGATTT+TGG | + | chr7_4:5540982-5541001 | Msa1136790:CDS | 45.0% |
| ! | GAAGAGGTGGATGATTTTGG+AGG | + | chr7_4:5540985-5541004 | Msa1136790:CDS | 45.0% |
| !! | AGAGGTGGATGATTTTGGAG+GGG | + | chr7_4:5540987-5541006 | Msa1136790:CDS | 45.0% |
| AAGCCAAGTGGATAAAGCGA+AGG | + | chr7_4:5541113-5541132 | Msa1136790:CDS | 45.0% | |
| GGATAAAGCGAAGGATTCTG+TGG | + | chr7_4:5541122-5541141 | Msa1136790:CDS | 45.0% | |
| GACAATGGAGAAGAATGTCG+GGG | + | chr7_4:5541164-5541183 | Msa1136790:CDS | 45.0% | |
| AGGGGAAAAAAGAGCTTGAG+TGG | + | chr7_4:5541226-5541245 | Msa1136790:CDS | 45.0% | |
| GGGGAAAAAAGAGCTTGAGT+GGG | + | chr7_4:5541227-5541246 | Msa1136790:CDS | 45.0% | |
| GTGTTTGTTTCGGATCCTGA+TGG | - | chr7_4:5540250-5540269 | None:intergenic | 45.0% | |
| GCGACGGTATATTTCGATGA+CGG | - | chr7_4:5540371-5540390 | None:intergenic | 45.0% | |
| CGAATTCATGAAGATCGCGA+CGG | - | chr7_4:5540387-5540406 | None:intergenic | 45.0% | |
| CGTCGCGATCTTCATGAATT+CGG | + | chr7_4:5540385-5540404 | Msa1136790:CDS | 45.0% | |
| GATCTTCATGAATTCGGCAC+AGG | + | chr7_4:5540391-5540410 | Msa1136790:CDS | 45.0% | |
| ATTCGGCACAGGTTTGAAGA+AGG | + | chr7_4:5540402-5540421 | Msa1136790:CDS | 45.0% | |
| TTGGTCAATGACGTGTCCAA+CGG | - | chr7_4:5540458-5540477 | None:intergenic | 45.0% | |
| GGACACGTCATTGACCAATT+CGG | + | chr7_4:5540460-5540479 | Msa1136790:CDS | 45.0% | |
| CTGAGCCGTTCCTTTAATCA+CGG | - | chr7_4:5540491-5540510 | None:intergenic | 45.0% | |
| ! | GTGGAAGTTGGAGTTTTCGT+TGG | + | chr7_4:5540696-5540715 | Msa1136790:CDS | 45.0% |
| AAGAGGATGAGGACTTGAGT+TGG | + | chr7_4:5540902-5540921 | Msa1136790:CDS | 45.0% | |
| AGAGGATGAGGACTTGAGTT+GGG | + | chr7_4:5540903-5540922 | Msa1136790:CDS | 45.0% | |
| GAGTTGGGATGTTGAAGATG+AGG | + | chr7_4:5540918-5540937 | Msa1136790:CDS | 45.0% | |
| ! | GTGGAAGAGGTGGATGATTT+TGG | + | chr7_4:5540982-5541001 | Msa1136790:CDS | 45.0% |
| ! | GAAGAGGTGGATGATTTTGG+AGG | + | chr7_4:5540985-5541004 | Msa1136790:CDS | 45.0% |
| !! | AGAGGTGGATGATTTTGGAG+GGG | + | chr7_4:5540987-5541006 | Msa1136790:CDS | 45.0% |
| AAGCCAAGTGGATAAAGCGA+AGG | + | chr7_4:5541113-5541132 | Msa1136790:CDS | 45.0% | |
| GGATAAAGCGAAGGATTCTG+TGG | + | chr7_4:5541122-5541141 | Msa1136790:CDS | 45.0% | |
| GACAATGGAGAAGAATGTCG+GGG | + | chr7_4:5541164-5541183 | Msa1136790:CDS | 45.0% | |
| AGGGGAAAAAAGAGCTTGAG+TGG | + | chr7_4:5541226-5541245 | Msa1136790:CDS | 45.0% | |
| GGGGAAAAAAGAGCTTGAGT+GGG | + | chr7_4:5541227-5541246 | Msa1136790:CDS | 45.0% | |
| ! | AACAGTTTTCTCCGACGACC+CGG | + | chr7_4:5540222-5540241 | Msa1136790:CDS | 50.0% |
| GGAGGAAGCGGTGTTTGTTT+CGG | - | chr7_4:5540260-5540279 | None:intergenic | 50.0% | |
| ! | GGATTCGGATTTTTCGCCGA+AGG | - | chr7_4:5540350-5540369 | None:intergenic | 50.0% |
| AGCTCGTGAAACGAATGTCG+AGG | + | chr7_4:5540878-5540897 | Msa1136790:CDS | 50.0% | |
| GCTCGTGAAACGAATGTCGA+GGG | + | chr7_4:5540879-5540898 | Msa1136790:CDS | 50.0% | |
| GAAACGAATGTCGAGGGAAG+AGG | + | chr7_4:5540885-5540904 | Msa1136790:CDS | 50.0% | |
| AATGTCGAGGGAAGAGGATG+AGG | + | chr7_4:5540891-5540910 | Msa1136790:CDS | 50.0% | |
| GTTGTTCAAGAGAAGGCCGA+TGG | + | chr7_4:5541090-5541109 | Msa1136790:CDS | 50.0% | |
| ATGGAGAAGAATGTCGGGGA+TGG | + | chr7_4:5541168-5541187 | Msa1136790:CDS | 50.0% | |
| GGTAAGTCAGAACTCTGAGC+AGG | + | chr7_4:5541203-5541222 | Msa1136790:CDS | 50.0% | |
| AAGTCAGAACTCTGAGCAGG+AGG | + | chr7_4:5541206-5541225 | Msa1136790:CDS | 50.0% | |
| AGTCAGAACTCTGAGCAGGA+GGG | + | chr7_4:5541207-5541226 | Msa1136790:CDS | 50.0% | |
| GCTTGAGTGGGATGAGATTG+AGG | + | chr7_4:5541239-5541258 | Msa1136790:CDS | 50.0% | |
| AAGGCAATGAGATTGGGGAG+TGG | + | chr7_4:5541285-5541304 | Msa1136790:CDS | 50.0% | |
| ! | TGATGATGATGAGCCTGCCA+AGG | + | chr7_4:5541389-5541408 | Msa1136790:CDS | 50.0% |
| ! | AACAGTTTTCTCCGACGACC+CGG | + | chr7_4:5540222-5540241 | Msa1136790:CDS | 50.0% |
| GGAGGAAGCGGTGTTTGTTT+CGG | - | chr7_4:5540260-5540279 | None:intergenic | 50.0% | |
| ! | GGATTCGGATTTTTCGCCGA+AGG | - | chr7_4:5540350-5540369 | None:intergenic | 50.0% |
| AGCTCGTGAAACGAATGTCG+AGG | + | chr7_4:5540878-5540897 | Msa1136790:CDS | 50.0% | |
| GCTCGTGAAACGAATGTCGA+GGG | + | chr7_4:5540879-5540898 | Msa1136790:CDS | 50.0% | |
| GAAACGAATGTCGAGGGAAG+AGG | + | chr7_4:5540885-5540904 | Msa1136790:CDS | 50.0% | |
| AATGTCGAGGGAAGAGGATG+AGG | + | chr7_4:5540891-5540910 | Msa1136790:CDS | 50.0% | |
| GTTGTTCAAGAGAAGGCCGA+TGG | + | chr7_4:5541090-5541109 | Msa1136790:CDS | 50.0% | |
| ATGGAGAAGAATGTCGGGGA+TGG | + | chr7_4:5541168-5541187 | Msa1136790:CDS | 50.0% | |
| GGTAAGTCAGAACTCTGAGC+AGG | + | chr7_4:5541203-5541222 | Msa1136790:CDS | 50.0% | |
| AAGTCAGAACTCTGAGCAGG+AGG | + | chr7_4:5541206-5541225 | Msa1136790:CDS | 50.0% | |
| AGTCAGAACTCTGAGCAGGA+GGG | + | chr7_4:5541207-5541226 | Msa1136790:CDS | 50.0% | |
| GCTTGAGTGGGATGAGATTG+AGG | + | chr7_4:5541239-5541258 | Msa1136790:CDS | 50.0% | |
| AAGGCAATGAGATTGGGGAG+TGG | + | chr7_4:5541285-5541304 | Msa1136790:CDS | 50.0% | |
| ! | TGATGATGATGAGCCTGCCA+AGG | + | chr7_4:5541389-5541408 | Msa1136790:CDS | 50.0% |
| ! | TTTCGGATCCTGATGGGTCC+GGG | - | chr7_4:5540243-5540262 | None:intergenic | 55.0% |
| ! | GTTTCGGATCCTGATGGGTC+CGG | - | chr7_4:5540244-5540263 | None:intergenic | 55.0% |
| GTGGGATTGAACGGCACGTT+TGG | - | chr7_4:5540292-5540311 | None:intergenic | 55.0% | |
| ! | AACGTGCCGTTCAATCCCAC+CGG | + | chr7_4:5540292-5540311 | Msa1136790:CDS | 55.0% |
| ! | ATGTTCTTCCACGTGCCGGT+GGG | - | chr7_4:5540310-5540329 | None:intergenic | 55.0% |
| ACCGGCACGTGGAAGAACAT+CGG | + | chr7_4:5540310-5540329 | Msa1136790:CDS | 55.0% | |
| CACGACTCTCTCGAAACCGT+TGG | + | chr7_4:5540439-5540458 | Msa1136790:CDS | 55.0% | |
| CGGGGATGGAAAGTCTTCAG+AGG | + | chr7_4:5541182-5541201 | Msa1136790:CDS | 55.0% | |
| GTCAGAACTCTGAGCAGGAG+GGG | + | chr7_4:5541208-5541227 | Msa1136790:CDS | 55.0% | |
| ! | TTTCGGATCCTGATGGGTCC+GGG | - | chr7_4:5540243-5540262 | None:intergenic | 55.0% |
| ! | GTTTCGGATCCTGATGGGTC+CGG | - | chr7_4:5540244-5540263 | None:intergenic | 55.0% |
| GTGGGATTGAACGGCACGTT+TGG | - | chr7_4:5540292-5540311 | None:intergenic | 55.0% | |
| ! | AACGTGCCGTTCAATCCCAC+CGG | + | chr7_4:5540292-5540311 | Msa1136790:CDS | 55.0% |
| ! | ATGTTCTTCCACGTGCCGGT+GGG | - | chr7_4:5540310-5540329 | None:intergenic | 55.0% |
| ACCGGCACGTGGAAGAACAT+CGG | + | chr7_4:5540310-5540329 | Msa1136790:CDS | 55.0% | |
| CACGACTCTCTCGAAACCGT+TGG | + | chr7_4:5540439-5540458 | Msa1136790:CDS | 55.0% | |
| CGGGGATGGAAAGTCTTCAG+AGG | + | chr7_4:5541182-5541201 | Msa1136790:CDS | 55.0% | |
| GTCAGAACTCTGAGCAGGAG+GGG | + | chr7_4:5541208-5541227 | Msa1136790:CDS | 55.0% | |
| ! | CACGTGCCGGTGGGATTGAA+CGG | - | chr7_4:5540301-5540320 | None:intergenic | 60.0% |
| GATGTTCTTCCACGTGCCGG+TGG | - | chr7_4:5540311-5540330 | None:intergenic | 60.0% | |
| GCCGATGTTCTTCCACGTGC+CGG | - | chr7_4:5540314-5540333 | None:intergenic | 60.0% | |
| GAAGGCCGATGGAAGCCAAG+TGG | + | chr7_4:5541101-5541120 | Msa1136790:CDS | 60.0% | |
| ! | CACGTGCCGGTGGGATTGAA+CGG | - | chr7_4:5540301-5540320 | None:intergenic | 60.0% |
| GATGTTCTTCCACGTGCCGG+TGG | - | chr7_4:5540311-5540330 | None:intergenic | 60.0% | |
| GCCGATGTTCTTCCACGTGC+CGG | - | chr7_4:5540314-5540333 | None:intergenic | 60.0% | |
| GAAGGCCGATGGAAGCCAAG+TGG | + | chr7_4:5541101-5541120 | Msa1136790:CDS | 60.0% | |
| ! | TCCTGATGGGTCCGGGTCGT+CGG | - | chr7_4:5540236-5540255 | None:intergenic | 65.0% |
| TGGCGAGTCGCTGGAGGAAG+CGG | - | chr7_4:5540272-5540291 | None:intergenic | 65.0% | |
| CACGTTTGGCGAGTCGCTGG+AGG | - | chr7_4:5540278-5540297 | None:intergenic | 65.0% | |
| CGTTCAATCCCACCGGCACG+TGG | + | chr7_4:5540299-5540318 | Msa1136790:CDS | 65.0% | |
| ! | TCCTGATGGGTCCGGGTCGT+CGG | - | chr7_4:5540236-5540255 | None:intergenic | 65.0% |
| TGGCGAGTCGCTGGAGGAAG+CGG | - | chr7_4:5540272-5540291 | None:intergenic | 65.0% | |
| CACGTTTGGCGAGTCGCTGG+AGG | - | chr7_4:5540278-5540297 | None:intergenic | 65.0% | |
| CGTTCAATCCCACCGGCACG+TGG | + | chr7_4:5540299-5540318 | Msa1136790:CDS | 65.0% | |
| TCCGACGACCCGGACCCATC+AGG | + | chr7_4:5540232-5540251 | Msa1136790:CDS | 70.0% | |
| CGGCACGTTTGGCGAGTCGC+TGG | - | chr7_4:5540281-5540300 | None:intergenic | 70.0% | |
| TCCGACGACCCGGACCCATC+AGG | + | chr7_4:5540232-5540251 | Msa1136790:CDS | 70.0% | |
| CGGCACGTTTGGCGAGTCGC+TGG | - | chr7_4:5540281-5540300 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 5540208 | 5541416 | 5540208 | ID=Msa1136790;Name=Msa1136790 |
| chr7_4 | mRNA | 5540208 | 5541416 | 5540208 | ID=Msa1136790-mRNA-1;Parent=Msa1136790;Name=Msa1136790-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|402 |
| chr7_4 | exon | 5540208 | 5541416 | 5540208 | ID=Msa1136790-mRNA-1:exon:1429;Parent=Msa1136790-mRNA-1 |
| chr7_4 | CDS | 5540208 | 5541416 | 5540208 | ID=Msa1136790-mRNA-1:cds;Parent=Msa1136790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
