Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036910 | NP_001237321.1 | 79.583 | 240 | 21 | 1 | 1 | 240 | 1 | 212 | 4.27e-131 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036910 | sp|Q941D5|VPS2C_ARATH | 75.630 | 238 | 30 | 1 | 1 | 238 | 1 | 210 | 3.04e-123 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036910 | C6SYZ9 | 79.583 | 240 | 21 | 1 | 1 | 240 | 1 | 212 | 2.04e-131 | 379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa1036910 | 0.810317 | 1.223871e-50 | -8.615850e-47 |
| Msa0017320 | Msa1036910 | 0.812539 | 4.029603e-51 | -8.615850e-47 |
| Msa0043730 | Msa1036910 | 0.824068 | 9.862100e-54 | -8.615850e-47 |
| Msa0055070 | Msa1036910 | 0.801313 | 9.550167e-49 | -8.615850e-47 |
| Msa0072170 | Msa1036910 | 0.814990 | 1.162845e-51 | -8.615850e-47 |
| Msa0085720 | Msa1036910 | 0.831324 | 1.780281e-55 | -8.615850e-47 |
| Msa0090390 | Msa1036910 | 0.821217 | 4.540305e-53 | -8.615850e-47 |
| Msa0092170 | Msa1036910 | 0.802355 | 5.835793e-49 | -8.615850e-47 |
| Msa0101020 | Msa1036910 | 0.809041 | 2.301631e-50 | -8.615850e-47 |
| Msa0120540 | Msa1036910 | 0.806328 | 8.675855e-50 | -8.615850e-47 |
| Msa0620330 | Msa1036910 | 0.808734 | 2.677794e-50 | -8.615850e-47 |
| Msa0626940 | Msa1036910 | 0.801736 | 7.821120e-49 | -8.615850e-47 |
| Msa0627350 | Msa1036910 | 0.801478 | 8.834989e-49 | -8.615850e-47 |
| Msa0630950 | Msa1036910 | 0.808114 | 3.631203e-50 | -8.615850e-47 |
| Msa0643320 | Msa1036910 | 0.804808 | 1.808255e-49 | -8.615850e-47 |
| Msa0654620 | Msa1036910 | 0.832897 | 7.274211e-56 | -8.615850e-47 |
| Msa0679550 | Msa1036910 | 0.842216 | 2.960542e-58 | -8.615850e-47 |
| Msa0679810 | Msa1036910 | 0.828289 | 9.763637e-55 | -8.615850e-47 |
| Msa0683140 | Msa1036910 | 0.802258 | 6.110846e-49 | -8.615850e-47 |
| Msa0689780 | Msa1036910 | 0.806328 | 8.674970e-50 | -8.615850e-47 |
| Msa0696420 | Msa1036910 | 0.801489 | 8.788079e-49 | -8.615850e-47 |
| Msa0698410 | Msa1036910 | 0.809938 | 1.477461e-50 | -8.615850e-47 |
| Msa0698440 | Msa1036910 | 0.810542 | 1.094332e-50 | -8.615850e-47 |
| Msa0707430 | Msa1036910 | 0.806152 | 9.450435e-50 | -8.615850e-47 |
| Msa0715410 | Msa1036910 | 0.801805 | 7.571096e-49 | -8.615850e-47 |
| Msa0720370 | Msa1036910 | 0.816135 | 6.465174e-52 | -8.615850e-47 |
| Msa0721340 | Msa1036910 | 0.810327 | 1.217996e-50 | -8.615850e-47 |
| Msa0742150 | Msa1036910 | 0.802405 | 5.698448e-49 | -8.615850e-47 |
| Msa0748070 | Msa1036910 | 0.802103 | 6.576191e-49 | -8.615850e-47 |
| Msa0764920 | Msa1036910 | 0.818496 | 1.901814e-52 | -8.615850e-47 |
| Msa0775560 | Msa1036910 | 0.821813 | 3.307629e-53 | -8.615850e-47 |
| Msa0786070 | Msa1036910 | 0.800309 | 1.530723e-48 | -8.615850e-47 |
| Msa0805920 | Msa1036910 | 0.828209 | 1.021185e-54 | -8.615850e-47 |
| Msa0809140 | Msa1036910 | 0.816313 | 5.896335e-52 | -8.615850e-47 |
| Msa0812060 | Msa1036910 | 0.813866 | 2.060356e-51 | -8.615850e-47 |
| Msa0812950 | Msa1036910 | 0.830634 | 2.629579e-55 | -8.615850e-47 |
| Msa0124550 | Msa1036910 | 0.802326 | 5.916970e-49 | -8.615850e-47 |
| Msa0130520 | Msa1036910 | 0.844083 | 9.415996e-59 | -8.615850e-47 |
| Msa0137870 | Msa1036910 | 0.812264 | 4.628017e-51 | -8.615850e-47 |
| Msa0140400 | Msa1036910 | 0.801070 | 1.070878e-48 | -8.615850e-47 |
| Msa0142280 | Msa1036910 | 0.804052 | 2.599486e-49 | -8.615850e-47 |
| Msa0145110 | Msa1036910 | 0.811785 | 5.883079e-51 | -8.615850e-47 |
| Msa0145150 | Msa1036910 | 0.800385 | 1.477555e-48 | -8.615850e-47 |
| Msa0171980 | Msa1036910 | 0.839625 | 1.417177e-57 | -8.615850e-47 |
| Msa0175050 | Msa1036910 | 0.834747 | 2.506537e-56 | -8.615850e-47 |
| Msa0189610 | Msa1036910 | 0.809088 | 2.249346e-50 | -8.615850e-47 |
| Msa0193540 | Msa1036910 | 0.807948 | 3.938791e-50 | -8.615850e-47 |
| Msa0194010 | Msa1036910 | 0.800139 | 1.657770e-48 | -8.615850e-47 |
| Msa0194720 | Msa1036910 | 0.804620 | 1.978964e-49 | -8.615850e-47 |
| Msa0202930 | Msa1036910 | 0.854377 | 1.282271e-61 | -8.615850e-47 |
| Msa0223920 | Msa1036910 | 0.806591 | 7.634791e-50 | -8.615850e-47 |
| Msa0229360 | Msa1036910 | 0.815773 | 7.785605e-52 | -8.615850e-47 |
| Msa0236070 | Msa1036910 | 0.820412 | 6.954715e-53 | -8.615850e-47 |
| Msa0384540 | Msa1036910 | 0.806942 | 6.437781e-50 | -8.615850e-47 |
| Msa0403490 | Msa1036910 | 0.816047 | 6.761317e-52 | -8.615850e-47 |
| Msa0436190 | Msa1036910 | 0.823176 | 1.594688e-53 | -8.615850e-47 |
| Msa0439890 | Msa1036910 | 0.825810 | 3.827053e-54 | -8.615850e-47 |
| Msa0482180 | Msa1036910 | 0.803824 | 2.898307e-49 | -8.615850e-47 |
| Msa1036740 | Msa1036910 | 0.813212 | 2.868860e-51 | -8.615850e-47 |
| Msa1036910 | Msa1045450 | 0.810594 | 1.066441e-50 | -8.615850e-47 |
| Msa1036910 | Msa1062030 | 0.814268 | 1.680094e-51 | -8.615850e-47 |
| Msa1036910 | Msa1063420 | 0.803030 | 4.235133e-49 | -8.615850e-47 |
| Msa1036910 | Msa1077340 | 0.822170 | 2.734025e-53 | -8.615850e-47 |
| Msa1036910 | Msa1089270 | 0.807333 | 5.319678e-50 | -8.615850e-47 |
| Msa1036910 | Msa1113880 | 0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa1036910 | Msa1115280 | 0.855826 | 4.861556e-62 | -8.615850e-47 |
| Msa1036910 | Msa1163870 | 0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa1036910 | Msa1164020 | 0.896115 | 5.026983e-76 | -8.615850e-47 |
| Msa1036910 | Msa1172130 | -0.836676 | 8.137951e-57 | -8.615850e-47 |
| Msa1036910 | Msa1174310 | 0.820189 | 7.824200e-53 | -8.615850e-47 |
| Msa1036910 | Msa1178370 | 0.801648 | 8.153752e-49 | -8.615850e-47 |
| Msa1036910 | Msa1183770 | 0.811736 | 6.029667e-51 | -8.615850e-47 |
| Msa1036910 | Msa1200310 | 0.802023 | 6.827924e-49 | -8.615850e-47 |
| Msa1036910 | Msa1200320 | 0.815631 | 8.375422e-52 | -8.615850e-47 |
| Msa1036910 | Msa1209190 | 0.822039 | 2.932030e-53 | -8.615850e-47 |
| Msa1036910 | Msa1209860 | 0.836065 | 1.163833e-56 | -8.615850e-47 |
| Msa1036910 | Msa1229610 | 0.830419 | 2.968035e-55 | -8.615850e-47 |
| Msa1036910 | Msa1229850 | 0.808872 | 2.501234e-50 | -8.615850e-47 |
| Msa1036910 | Msa1233950 | 0.812474 | 4.162939e-51 | -8.615850e-47 |
| Msa1036910 | Msa1258370 | 0.806477 | 8.071966e-50 | -8.615850e-47 |
| Msa1036910 | Msa1272320 | 0.845586 | 3.703977e-59 | -8.615850e-47 |
| Msa1036910 | Msa1276340 | 0.801366 | 9.314166e-49 | -8.615850e-47 |
| Msa1036910 | Msa1298550 | -0.805156 | 1.529591e-49 | -8.615850e-47 |
| Msa1036910 | Msa1314770 | 0.816349 | 5.790966e-52 | -8.615850e-47 |
| Msa1036910 | Msa1330890 | -0.816497 | 5.363985e-52 | -8.615850e-47 |
| Msa1036910 | Msa1332050 | 0.830889 | 2.277816e-55 | -8.615850e-47 |
| Msa1036910 | Msa1350690 | 0.808557 | 2.921844e-50 | -8.615850e-47 |
| Msa1036910 | Msa1360240 | 0.814453 | 1.528878e-51 | -8.615850e-47 |
| Msa1036910 | Msa1363700 | 0.816121 | 6.512012e-52 | -8.615850e-47 |
| Msa1036910 | Msa1364160 | 0.817473 | 3.237928e-52 | -8.615850e-47 |
| Msa1036910 | Msa1400050 | 0.810725 | 9.992189e-51 | -8.615850e-47 |
| Msa1036910 | Msa1420270 | 0.814231 | 1.712110e-51 | -8.615850e-47 |
| Msa1036910 | Msa1422840 | 0.800288 | 1.546462e-48 | -8.615850e-47 |
| Msa1036910 | Msa1430130 | 0.803043 | 4.209151e-49 | -8.615850e-47 |
| Msa1036910 | Msa1433220 | 0.800355 | 1.498646e-48 | -8.615850e-47 |
| Msa1036910 | Msa1443610 | 0.817237 | 3.659156e-52 | -8.615850e-47 |
| Msa1036910 | Msa1460750 | 0.805248 | 1.463308e-49 | -8.615850e-47 |
| Msa0239060 | Msa1036910 | 0.820020 | 8.553464e-53 | -8.615850e-47 |
| Msa0262370 | Msa1036910 | 0.813587 | 2.374145e-51 | -8.615850e-47 |
| Msa0265160 | Msa1036910 | 0.838383 | 2.971692e-57 | -8.615850e-47 |
| Msa0266210 | Msa1036910 | 0.805505 | 1.292544e-49 | -8.615850e-47 |
| Msa0266240 | Msa1036910 | 0.819450 | 1.154376e-52 | -8.615850e-47 |
| Msa0284450 | Msa1036910 | 0.826386 | 2.790692e-54 | -8.615850e-47 |
| Msa0287670 | Msa1036910 | 0.809388 | 1.939595e-50 | -8.615850e-47 |
| Msa0296980 | Msa1036910 | -0.806074 | 9.814927e-50 | -8.615850e-47 |
| Msa0300150 | Msa1036910 | 0.817710 | 2.863457e-52 | -8.615850e-47 |
| Msa0303160 | Msa1036910 | 0.830975 | 2.169790e-55 | -8.615850e-47 |
| Msa0304840 | Msa1036910 | 0.816724 | 4.771869e-52 | -8.615850e-47 |
| Msa0316920 | Msa1036910 | 0.803072 | 4.149849e-49 | -8.615850e-47 |
| Msa0319290 | Msa1036910 | 0.810530 | 1.101209e-50 | -8.615850e-47 |
| Msa0322680 | Msa1036910 | 0.813812 | 2.117752e-51 | -8.615850e-47 |
| Msa0335320 | Msa1036910 | -0.802065 | 6.694899e-49 | -8.615850e-47 |
| Msa0341230 | Msa1036910 | 0.808607 | 2.850723e-50 | -8.615850e-47 |
| Msa0514610 | Msa1036910 | 0.816224 | 6.174976e-52 | -8.615850e-47 |
| Msa0524600 | Msa1036910 | 0.811355 | 7.298427e-51 | -8.615850e-47 |
| Msa0527910 | Msa1036910 | 0.807172 | 5.754969e-50 | -8.615850e-47 |
| Msa0530650 | Msa1036910 | 0.800142 | 1.655806e-48 | -8.615850e-47 |
| Msa0534410 | Msa1036910 | 0.835847 | 1.321961e-56 | -8.615850e-47 |
| Msa0537770 | Msa1036910 | 0.811088 | 8.339341e-51 | -8.615850e-47 |
| Msa0538160 | Msa1036910 | 0.830344 | 3.095736e-55 | -8.615850e-47 |
| Msa0545290 | Msa1036910 | 0.829689 | 4.472670e-55 | -8.615850e-47 |
| Msa0582280 | Msa1036910 | 0.838560 | 2.674142e-57 | -8.615850e-47 |
| Msa0587190 | Msa1036910 | 0.816882 | 4.397485e-52 | -8.615850e-47 |
| Msa0600890 | Msa1036910 | 0.834349 | 3.155517e-56 | -8.615850e-47 |
| Msa0602370 | Msa1036910 | 0.822543 | 2.239958e-53 | -8.615850e-47 |
| Msa0844610 | Msa1036910 | 0.808286 | 3.336518e-50 | -8.615850e-47 |
| Msa0877710 | Msa1036910 | 0.812217 | 4.736571e-51 | -8.615850e-47 |
| Msa0901320 | Msa1036910 | 0.805469 | 1.314848e-49 | -8.615850e-47 |
| Msa0930820 | Msa1036910 | 0.805060 | 1.601786e-49 | -8.615850e-47 |
| Msa0941540 | Msa1036910 | 0.807913 | 4.006609e-50 | -8.615850e-47 |
| Msa0945100 | Msa1036910 | 0.857371 | 1.708200e-62 | -8.615850e-47 |
| Msa0945120 | Msa1036910 | 0.820159 | 7.946561e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036910 | MtrunA17_Chr7g0261511 | 87.083 | 240 | 3 | 1 | 1 | 240 | 1 | 212 | 6.13e-128 | 360 |
| Msa1036910 | MtrunA17_Chr1g0183621 | 72.083 | 240 | 39 | 1 | 1 | 240 | 5 | 216 | 6.00e-122 | 345 |
| Msa1036910 | MtrunA17_Chr2g0303251 | 69.008 | 242 | 43 | 2 | 1 | 238 | 1 | 214 | 2.26e-105 | 303 |
| Msa1036910 | MtrunA17_Chr2g0300321 | 39.431 | 246 | 111 | 4 | 3 | 238 | 4 | 221 | 2.13e-38 | 133 |
| Msa1036910 | MtrunA17_Chr8g0343561 | 41.176 | 204 | 92 | 1 | 3 | 206 | 4 | 179 | 6.41e-35 | 124 |
| Msa1036910 | MtrunA17_Chr4g0028231 | 27.344 | 256 | 136 | 5 | 1 | 239 | 5 | 227 | 3.41e-16 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036910 | AT1G03950.1 | 75.630 | 238 | 30 | 1 | 1 | 238 | 1 | 210 | 3.09e-124 | 351 |
| Msa1036910 | AT5G44560.1 | 65.323 | 248 | 48 | 2 | 1 | 238 | 1 | 220 | 7.30e-105 | 303 |
| Msa1036910 | AT5G44560.2 | 64.474 | 228 | 43 | 2 | 21 | 238 | 1 | 200 | 5.65e-94 | 274 |
| Msa1036910 | AT5G44560.4 | 66.990 | 206 | 40 | 1 | 1 | 206 | 1 | 178 | 1.81e-91 | 267 |
| Msa1036910 | AT5G44560.3 | 65.060 | 166 | 30 | 1 | 1 | 166 | 1 | 138 | 5.79e-68 | 207 |
| Msa1036910 | AT2G06530.1 | 41.935 | 248 | 105 | 6 | 2 | 238 | 4 | 223 | 4.33e-41 | 140 |
| Msa1036910 | AT2G06530.2 | 41.048 | 229 | 96 | 6 | 21 | 238 | 2 | 202 | 1.66e-34 | 123 |
| Msa1036910 | AT5G22950.1 | 29.249 | 253 | 137 | 6 | 1 | 239 | 5 | 229 | 1.12e-14 | 71.2 |
Find 85 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCTGTGCCGATTGTTTC+TGG | 0.092577 | 7_1:+73410008 | None:intergenic |
| GAACTTAAAACCAGGATTTC+TGG | 0.141192 | 7_1:-73408131 | Msa1036910:three_prime_UTR |
| ATAACTACAGCCAAAATTTA+TGG | 0.170867 | 7_1:+73408488 | None:intergenic |
| ATAACTTTGGCTTGCTTTGC+TGG | 0.189100 | 7_1:+73410040 | None:intergenic |
| TCTAAGAAACCCATAAATTT+TGG | 0.196836 | 7_1:-73408498 | Msa1036910:exon |
| AACCAGGATTTCTGGTGTTT+TGG | 0.273580 | 7_1:-73408123 | Msa1036910:three_prime_UTR |
| GCAACAGATTGCTAATCTTC+AGG | 0.286548 | 7_1:-73411093 | Msa1036910:CDS |
| CTTTGCTGCGATTCTCCCTT+TGG | 0.289266 | 7_1:+73408786 | None:intergenic |
| ATAGGTATTGAGAGGGAAAT+TGG | 0.295401 | 7_1:-73411479 | Msa1036910:intron |
| ACCTTTGGCGGTGGGTTTCT+TGG | 0.303398 | 7_1:+73411716 | None:intergenic |
| TGCAATGAATCCAACAAATT+AGG | 0.308601 | 7_1:+73410073 | None:intergenic |
| TGCTCTTACCTATTGATGTT+TGG | 0.330713 | 7_1:-73408253 | Msa1036910:three_prime_UTR |
| TAACTACAGCCAAAATTTAT+GGG | 0.343069 | 7_1:+73408489 | None:intergenic |
| TTTACCGTTTCCTAATTTGT+TGG | 0.361109 | 7_1:-73410083 | Msa1036910:CDS |
| CACTCCTACCAAACATCAAT+AGG | 0.367797 | 7_1:+73408245 | None:intergenic |
| GGCAATGTCAGCTATGAATA+AGG | 0.369472 | 7_1:-73410849 | Msa1036910:intron |
| ATGAACAGTTCACGAGTATA+TGG | 0.375254 | 7_1:+73408032 | None:intergenic |
| TTTGCTGCGATTCTCCCTTT+GGG | 0.375553 | 7_1:+73408787 | None:intergenic |
| TGTTTGGTAGGAGTGAAAAT+AGG | 0.381327 | 7_1:-73408237 | Msa1036910:three_prime_UTR |
| TCAATAGGTAAGAGCAGAAA+TGG | 0.385517 | 7_1:+73408260 | None:intergenic |
| TACTAGCTCGTCAGCTGATA+AGG | 0.390691 | 7_1:-73411121 | Msa1036910:CDS |
| GTTGGATTCATTGCAGCAAA+TGG | 0.394513 | 7_1:-73410065 | Msa1036910:CDS |
| CTGATGATACAAGGTTTAGA+TGG | 0.405293 | 7_1:+73408004 | None:intergenic |
| AAATATATAGTCCACAACTA+TGG | 0.413085 | 7_1:+73408315 | None:intergenic |
| CTGGAATTCCTGCATAACTT+TGG | 0.413362 | 7_1:+73410027 | None:intergenic |
| GGAAATTGGATCATTACAAT+TGG | 0.414552 | 7_1:-73411465 | Msa1036910:CDS |
| TGCTAATCTTCAGGGTAGTC+GGG | 0.416103 | 7_1:-73411084 | Msa1036910:CDS |
| TGATGACCTTGAGAAGCGTT+TGG | 0.421971 | 7_1:-73408525 | Msa1036910:CDS |
| GCACATTCTTCTGTTGCTGT+TGG | 0.431120 | 7_1:-73410890 | Msa1036910:CDS |
| CTTACCTATTGATGTTTGGT+AGG | 0.431148 | 7_1:-73408249 | Msa1036910:three_prime_UTR |
| TCTGTTGCTGTTGGCATGAA+AGG | 0.439539 | 7_1:-73410881 | Msa1036910:CDS |
| CGGAACTTTAAAAGATTCGT+TGG | 0.444146 | 7_1:-73408081 | Msa1036910:three_prime_UTR |
| AACCTTGTATCATCAGTTGT+TGG | 0.454584 | 7_1:-73407997 | None:intergenic |
| CAACAGATTGCTAATCTTCA+GGG | 0.455803 | 7_1:-73411092 | Msa1036910:CDS |
| TTGCTAATCTTCAGGGTAGT+CGG | 0.468100 | 7_1:-73411085 | Msa1036910:CDS |
| TGACAGGTGCTTGATGAAAT+CGG | 0.480841 | 7_1:-73408934 | Msa1036910:intron |
| TACCAAAACACCAGAAATCC+TGG | 0.482126 | 7_1:+73408121 | None:intergenic |
| AAGTTCCGTGTGAGTTCTAG+TGG | 0.485468 | 7_1:+73408096 | None:intergenic |
| TGGCATGAAAGGCGCTACTA+AGG | 0.493496 | 7_1:-73410870 | Msa1036910:CDS |
| ACTTGGCACTCATTTACAAA+TGG | 0.494947 | 7_1:+73408283 | None:intergenic |
| CGGTGTCGATATTGCCTCAC+AGG | 0.505099 | 7_1:-73408914 | Msa1036910:intron |
| ATTAAGAGAACTGCTAAGAC+AGG | 0.519875 | 7_1:-73411321 | Msa1036910:CDS |
| CTCGTCAGCTGATAAGGCTT+AGG | 0.530813 | 7_1:-73411115 | Msa1036910:CDS |
| GAATCCAACAAATTAGGAAA+CGG | 0.533598 | 7_1:+73410079 | None:intergenic |
| AGAAGAAGAACCTTTGGCGG+TGG | 0.535725 | 7_1:+73411707 | None:intergenic |
| AAAGCAAGCCAAAGTTATGC+AGG | 0.535984 | 7_1:-73410035 | Msa1036910:CDS |
| TGACCTTGAGAAGCGTTTGG+CGG | 0.541826 | 7_1:-73408522 | Msa1036910:CDS |
| GAAGAAGAACCTTTGGCGGT+GGG | 0.543040 | 7_1:+73411708 | None:intergenic |
| ACCAAGAAACCCACCGCCAA+AGG | 0.550200 | 7_1:-73411717 | Msa1036910:intron |
| AGTTATCTTCAGCTCCCAAA+GGG | 0.551907 | 7_1:-73408801 | Msa1036910:CDS |
| CCAGAAACAATCGGCACAGA+TGG | 0.552247 | 7_1:-73410008 | Msa1036910:CDS |
| GCAGGAATTCCAGAAACAAT+CGG | 0.554202 | 7_1:-73410017 | Msa1036910:CDS |
| GCAAAGAATACTGAAAATGT+TGG | 0.554829 | 7_1:-73408769 | Msa1036910:CDS |
| TCATGAACTAACATGAGAGC+AGG | 0.557036 | 7_1:+73410585 | None:intergenic |
| AGAATACTGAAAATGTTGGC+AGG | 0.560171 | 7_1:-73408765 | Msa1036910:intron |
| AGATGTCATAGATGATGCCT+TGG | 0.571244 | 7_1:-73409870 | Msa1036910:CDS |
| CAGTTATCTTCAGCTCCCAA+AGG | 0.578514 | 7_1:-73408802 | Msa1036910:CDS |
| CCATGATTGAACTTAAAACC+AGG | 0.581112 | 7_1:-73408139 | Msa1036910:three_prime_UTR |
| GCAACCTTGCGATTGTGCCA+AGG | 0.584043 | 7_1:-73410608 | Msa1036910:CDS |
| TTCAGCTTCATCATCATCCA+AGG | 0.587316 | 7_1:+73409853 | None:intergenic |
| TAGTAGATTGAACATAGTGC+AGG | 0.588553 | 7_1:-73408200 | Msa1036910:three_prime_UTR |
| ACTAACATGAGAGCAGGCCT+TGG | 0.588794 | 7_1:+73410591 | None:intergenic |
| GGTAAGAGCAGAAATGGACT+TGG | 0.588901 | 7_1:+73408266 | None:intergenic |
| AGAAGAAGAAGAACCTTTGG+CGG | 0.591426 | 7_1:+73411704 | None:intergenic |
| GAGCCGCCAAACGCTTCTCA+AGG | 0.592287 | 7_1:+73408519 | None:intergenic |
| TACCAACAACTGATGATACA+AGG | 0.595486 | 7_1:+73407995 | None:intergenic |
| TCATATATATAGGTATTGAG+AGG | 0.599716 | 7_1:-73411487 | Msa1036910:intron |
| TAGGAGTGAAAATAGGCAAG+AGG | 0.602779 | 7_1:-73408230 | Msa1036910:three_prime_UTR |
| AGAGAATAGATTACCTCTAG+TGG | 0.604125 | 7_1:+73411571 | None:intergenic |
| GGATGATGATGAAGCTGAAG+AGG | 0.605718 | 7_1:-73409849 | Msa1036910:CDS |
| CAGGCCTTGGCACAATCGCA+AGG | 0.609086 | 7_1:+73410604 | None:intergenic |
| TGGTGAAGATGTTCATCGTG+CGG | 0.621599 | 7_1:+73411736 | None:intergenic |
| GGTAGTCGGGCTCAGATGAG+AGG | 0.622685 | 7_1:-73411071 | Msa1036910:CDS |
| GAAAATAGGCAAGAGGAGAA+CGG | 0.628842 | 7_1:-73408223 | Msa1036910:three_prime_UTR |
| CATATATATAGGTATTGAGA+GGG | 0.628943 | 7_1:-73411486 | Msa1036910:intron |
| AAAGTAGTAGGAAAGTAACA+AGG | 0.639375 | 7_1:-73411810 | Msa1036910:five_prime_UTR |
| CTGTAGTTGAGCCATAGTTG+TGG | 0.641761 | 7_1:-73408326 | Msa1036910:three_prime_UTR |
| TGTGACATCCAGGTCACACA+AGG | 0.645114 | 7_1:-73410633 | Msa1036910:intron |
| TGCGGTATTGTCAACAACGA+AGG | 0.653386 | 7_1:+73411754 | None:intergenic |
| GTATTCCACTAGAACTCACA+CGG | 0.655449 | 7_1:-73408101 | Msa1036910:three_prime_UTR |
| TATATGGTTCACGATCTCAA+AGG | 0.658434 | 7_1:-73408468 | Msa1036910:three_prime_UTR |
| GAAATGACTAACGCCACTAG+AGG | 0.662249 | 7_1:-73411584 | Msa1036910:intron |
| AGGCATAGCAACTCACACGC+AGG | 0.676531 | 7_1:-73411051 | Msa1036910:intron |
| AACTGCTAAGACAGGAAACG+AGG | 0.681032 | 7_1:-73411313 | Msa1036910:intron |
| AAAGCTTATTCCTACCTGTG+AGG | 0.707349 | 7_1:+73408900 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTAATTAATTAAATT+AGG | + | chr7_1:73408382-73408401 | None:intergenic | 0.0% |
| !! | AAAAAAAATATTATAATAAA+AGG | + | chr7_1:73410112-73410131 | None:intergenic | 0.0% |
| !! | ATTAATACTATCATATATAT+AGG | - | chr7_1:73408400-73408419 | Msa1036910:three_prime_UTR | 10.0% |
| !! | TAAAGTTAGTAATAATAATA+TGG | - | chr7_1:73408515-73408534 | Msa1036910:CDS | 10.0% |
| !!! | ATTTATAAATTAGTTTAAGA+GGG | + | chr7_1:73410701-73410720 | None:intergenic | 10.0% |
| !!! | TATTTATAAATTAGTTTAAG+AGG | + | chr7_1:73410702-73410721 | None:intergenic | 10.0% |
| !!! | TATGATATATTAATTTTAAG+AGG | - | chr7_1:73411529-73411548 | Msa1036910:intron | 10.0% |
| !!! | TAGCATTTGATTTTTATTTA+TGG | - | chr7_1:73409479-73409498 | Msa1036910:intron | 15.0% |
| !!! | ATATCATATATCATTTTTCA+AGG | + | chr7_1:73411517-73411536 | None:intergenic | 15.0% |
| !!! | AAATTTGATGTTTTATTCTC+AGG | - | chr7_1:73408741-73408760 | Msa1036910:intron | 20.0% |
| !!! | AATTTGATGTTTTATTCTCA+GGG | - | chr7_1:73408742-73408761 | Msa1036910:intron | 20.0% |
| !!! | TGTCCATTTTCATAATATAA+AGG | - | chr7_1:73409105-73409124 | Msa1036910:intron | 20.0% |
| !!! | GTCCATTTTCATAATATAAA+GGG | - | chr7_1:73409106-73409125 | Msa1036910:intron | 20.0% |
| !!! | TGTCCATTTTCATAATATAA+AGG | - | chr7_1:73409105-73409124 | Msa1036910:intron | 20.0% |
| !!! | GTCCATTTTCATAATATAAA+GGG | - | chr7_1:73409106-73409125 | Msa1036910:intron | 20.0% |
| !!! | TGCAAATGAAAATTCTTTTT+TGG | - | chr7_1:73409402-73409421 | Msa1036910:intron | 20.0% |
| !!! | AAATGAAAATTCTTTTTTGG+AGG | - | chr7_1:73409405-73409424 | Msa1036910:intron | 20.0% |
| !!! | TATCAATGTTTTGTTTAACT+CGG | + | chr7_1:73409755-73409774 | None:intergenic | 20.0% |
| !! | GTTAAACAAAACATTGATAT+TGG | - | chr7_1:73409756-73409775 | Msa1036910:intron | 20.0% |
| !!! | TTTTCTAGAATTTTACAAGT+TGG | - | chr7_1:73409936-73409955 | Msa1036910:intron | 20.0% |
| !!! | AAACAAAAGTATAGTTACAT+GGG | - | chr7_1:73410596-73410615 | Msa1036910:intron | 20.0% |
| !!! | GTATTTTATTTGTACTCTTT+TGG | - | chr7_1:73411072-73411091 | Msa1036910:CDS | 20.0% |
| !!! | AACTTTCTTATTGTTTTTAG+AGG | + | chr7_1:73411184-73411203 | None:intergenic | 20.0% |
| !! | ACAAGTTAAAATTTCTTAAG+CGG | - | chr7_1:73411295-73411314 | Msa1036910:intron | 20.0% |
| !!! | GATATATTAATTTTAAGAGG+TGG | - | chr7_1:73411532-73411551 | Msa1036910:intron | 20.0% |
| ! | AGAAAAAAAGAGAAAGTAGT+AGG | - | chr7_1:73408075-73408094 | Msa1036910:three_prime_UTR | 25.0% |
| !!! | TCATATATATAGGTATTGAG+AGG | - | chr7_1:73408410-73408429 | Msa1036910:three_prime_UTR | 25.0% |
| !!! | CATATATATAGGTATTGAGA+GGG | - | chr7_1:73408411-73408430 | Msa1036910:three_prime_UTR | 25.0% |
| !!! | TATGGATTGTTTGTTTTGTT+AGG | - | chr7_1:73408533-73408552 | Msa1036910:CDS | 25.0% |
| !!! | ATCTGCAAATTTTTAGTCAT+AGG | - | chr7_1:73408620-73408639 | Msa1036910:intron | 25.0% |
| ! | TTATCTACTGACATAAACAA+AGG | + | chr7_1:73408689-73408708 | None:intergenic | 25.0% |
| ! | TCAAATAAGTTAATTCGAAC+AGG | - | chr7_1:73408711-73408730 | Msa1036910:intron | 25.0% |
| ! | AAACACACAACAAAAACAAA+GGG | + | chr7_1:73408889-73408908 | None:intergenic | 25.0% |
| ! | AAAACACACAACAAAAACAA+AGG | + | chr7_1:73408890-73408909 | None:intergenic | 25.0% |
| !! | TATGATATTTGACTTAGCTA+TGG | - | chr7_1:73408955-73408974 | Msa1036910:intron | 25.0% |
| ! | CACCCTTTATATTATGAAAA+TGG | + | chr7_1:73409111-73409130 | None:intergenic | 25.0% |
| !! | CATTTTCATAATATAAAGGG+TGG | - | chr7_1:73409109-73409128 | Msa1036910:intron | 25.0% |
| ! | CACCCTTTATATTATGAAAA+TGG | + | chr7_1:73409111-73409130 | None:intergenic | 25.0% |
| !! | CATTTTCATAATATAAAGGG+TGG | - | chr7_1:73409109-73409128 | Msa1036910:intron | 25.0% |
| ! | ATATTGTTCCAAAACTTGAT+TGG | - | chr7_1:73409336-73409355 | Msa1036910:intron | 25.0% |
| ! | TATTGTTCCAAAACTTGATT+GGG | - | chr7_1:73409337-73409356 | Msa1036910:intron | 25.0% |
| !! | TGTAATAGCAACATTTTGTT+TGG | - | chr7_1:73409361-73409380 | Msa1036910:intron | 25.0% |
| !! | TAGAGTTTTCATGAATTTTG+AGG | - | chr7_1:73409439-73409458 | Msa1036910:intron | 25.0% |
| !! | TGTTCATTTGCTAAATATTG+TGG | - | chr7_1:73409588-73409607 | Msa1036910:intron | 25.0% |
| ! | AATGGTGTAGAAAATATTTG+TGG | + | chr7_1:73409785-73409804 | None:intergenic | 25.0% |
| ! | AATCATTGTTTACACTTCAA+TGG | - | chr7_1:73409971-73409990 | Msa1036910:intron | 25.0% |
| ! | TTAAAATGACCTGTAGTTTA+TGG | - | chr7_1:73410192-73410211 | Msa1036910:intron | 25.0% |
| ! | GTAAATAAACCAATCCAAAT+AGG | + | chr7_1:73410378-73410397 | None:intergenic | 25.0% |
| !! | CATGTAACTATACTTTTGTT+TGG | + | chr7_1:73410597-73410616 | None:intergenic | 25.0% |
| !! | CAAACAAAAGTATAGTTACA+TGG | - | chr7_1:73410595-73410614 | Msa1036910:intron | 25.0% |
| ! | CTAATAATCAGTGAAAACTT+AGG | - | chr7_1:73410664-73410683 | Msa1036910:intron | 25.0% |
| ! | TAGTTACAAGGTTTAAGAAA+TGG | - | chr7_1:73410828-73410847 | Msa1036910:intron | 25.0% |
| ! | TTTATTCACAAAGAGTAAGA+TGG | - | chr7_1:73410854-73410873 | Msa1036910:CDS | 25.0% |
| ! | TTATTCACAAAGAGTAAGAT+GGG | - | chr7_1:73410855-73410874 | Msa1036910:CDS | 25.0% |
| ! | GCTAATATCATCTTAATGTA+AGG | + | chr7_1:73410894-73410913 | None:intergenic | 25.0% |
| !!! | CTTATTGTTTTTAGAGGATA+GGG | + | chr7_1:73411178-73411197 | None:intergenic | 25.0% |
| !!! | TCTTATTGTTTTTAGAGGAT+AGG | + | chr7_1:73411179-73411198 | None:intergenic | 25.0% |
| ! | CAATAAGAAAGTTAAGAGAA+AGG | - | chr7_1:73411191-73411210 | Msa1036910:intron | 25.0% |
| ! | GTAATAACATCAAAATTCCA+AGG | + | chr7_1:73411341-73411360 | None:intergenic | 25.0% |
| !!! | ATTTTGATGTTATTACAGCT+CGG | - | chr7_1:73411345-73411364 | Msa1036910:CDS | 25.0% |
| !! | TCTAAGAAACCCATAAATTT+TGG | - | chr7_1:73411399-73411418 | Msa1036910:intron | 25.0% |
| ! | TAACTACAGCCAAAATTTAT+GGG | + | chr7_1:73411411-73411430 | None:intergenic | 25.0% |
| ! | ATAACTACAGCCAAAATTTA+TGG | + | chr7_1:73411412-73411431 | None:intergenic | 25.0% |
| !!! | AAATTTTGGCTGTAGTTATA+TGG | - | chr7_1:73411413-73411432 | Msa1036910:intron | 25.0% |
| ! | AAATATATAGTCCACAACTA+TGG | + | chr7_1:73411585-73411604 | None:intergenic | 25.0% |
| ! | AAAGTTTTACGAGTAGAACA+CGG | - | chr7_1:73408029-73408048 | Msa1036910:three_prime_UTR | 30.0% |
| !!! | TTCTCTTTTTTTCTTCACGT+TGG | + | chr7_1:73408069-73408088 | None:intergenic | 30.0% |
| AAAGTAGTAGGAAAGTAACA+AGG | - | chr7_1:73408087-73408106 | Msa1036910:three_prime_UTR | 30.0% | |
| !! | TTTAATTGATTTTCCTGCAG+AGG | - | chr7_1:73408270-73408289 | Msa1036910:three_prime_UTR | 30.0% |
| GGAAATTGGATCATTACAAT+TGG | - | chr7_1:73408432-73408451 | Msa1036910:three_prime_UTR | 30.0% | |
| ATTGTTCCAAAACTTGATTG+GGG | - | chr7_1:73409338-73409357 | Msa1036910:intron | 30.0% | |
| TGGAGCAATGAACAATATTA+AGG | - | chr7_1:73409535-73409554 | Msa1036910:intron | 30.0% | |
| GGAGCAATGAACAATATTAA+GGG | - | chr7_1:73409536-73409555 | Msa1036910:intron | 30.0% | |
| AACAATATTAAGGGTTGCTA+TGG | - | chr7_1:73409545-73409564 | Msa1036910:intron | 30.0% | |
| AAGGGACTTCAGAAATTAAA+AGG | - | chr7_1:73409679-73409698 | Msa1036910:intron | 30.0% | |
| TTGAAGAACTGCTATTATCA+AGG | + | chr7_1:73409728-73409747 | None:intergenic | 30.0% | |
| AACGGTAAAAGACTGAAAAA+TGG | + | chr7_1:73409803-73409822 | None:intergenic | 30.0% | |
| ! | TTTACCGTTTCCTAATTTGT+TGG | - | chr7_1:73409814-73409833 | Msa1036910:intron | 30.0% |
| GAATCCAACAAATTAGGAAA+CGG | + | chr7_1:73409821-73409840 | None:intergenic | 30.0% | |
| TGCAATGAATCCAACAAATT+AGG | + | chr7_1:73409827-73409846 | None:intergenic | 30.0% | |
| AATTATGCTTCTCTGTTTAC+AGG | - | chr7_1:73410139-73410158 | Msa1036910:intron | 30.0% | |
| ! | CCTATTTTGTATCCTAACTT+CGG | - | chr7_1:73410275-73410294 | Msa1036910:intron | 30.0% |
| TTTATTCTTGATTTCCCCAA+GGG | + | chr7_1:73410309-73410328 | None:intergenic | 30.0% | |
| ! | TTTTATTCTTGATTTCCCCA+AGG | + | chr7_1:73410310-73410329 | None:intergenic | 30.0% |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr7_1:73410460-73410479 | None:intergenic | 30.0% | |
| AAATTATCTCCACAAGATCA+TGG | + | chr7_1:73410639-73410658 | None:intergenic | 30.0% | |
| TGATCTTGTGGAGATAATTT+AGG | - | chr7_1:73410639-73410658 | Msa1036910:intron | 30.0% | |
| GATCTTGTGGAGATAATTTA+GGG | - | chr7_1:73410640-73410659 | Msa1036910:intron | 30.0% | |
| ATCTTGTGGAGATAATTTAG+GGG | - | chr7_1:73410641-73410660 | Msa1036910:intron | 30.0% | |
| ! | AATTAGTTTAAGAGGGTATG+CGG | + | chr7_1:73410694-73410713 | None:intergenic | 30.0% |
| GCAAAGAATACTGAAAATGT+TGG | - | chr7_1:73411128-73411147 | Msa1036910:CDS | 30.0% | |
| !! | TTTGCAAGTTTTAATGACCT+TGG | - | chr7_1:73411321-73411340 | Msa1036910:CDS | 30.0% |
| ! | TTTTGATGTTATTACAGCTC+GGG | - | chr7_1:73411346-73411365 | Msa1036910:intron | 30.0% |
| !!! | TAAAAGATTCGTTGGTTTTG+TGG | - | chr7_1:73411824-73411843 | Msa1036910:five_prime_UTR | 30.0% |
| AGAAGAAGAAGAAGAACCTT+TGG | + | chr7_1:73408199-73408218 | None:intergenic | 35.0% | |
| AGAGAATAGATTACCTCTAG+TGG | + | chr7_1:73408329-73408348 | None:intergenic | 35.0% | |
| !! | ATAGGTATTGAGAGGGAAAT+TGG | - | chr7_1:73408418-73408437 | Msa1036910:three_prime_UTR | 35.0% |
| ATTAAGAGAACTGCTAAGAC+AGG | - | chr7_1:73408576-73408595 | Msa1036910:intron | 35.0% | |
| CAACAGATTGCTAATCTTCA+GGG | - | chr7_1:73408805-73408824 | Msa1036910:intron | 35.0% | |
| !! | TTGTTGACTTGTGTTTGAGA+TGG | - | chr7_1:73408923-73408942 | Msa1036910:CDS | 35.0% |
| ! | ATTACACCCCAATCAAGTTT+TGG | + | chr7_1:73409347-73409366 | None:intergenic | 35.0% |
| !!! | CTTTTTTGGAGGTGATATAG+AGG | - | chr7_1:73409416-73409435 | Msa1036910:intron | 35.0% |
| CATGTTAGTCCATAAACTAC+AGG | + | chr7_1:73410204-73410223 | None:intergenic | 35.0% | |
| CCGAAGTTAGGATACAAAAT+AGG | + | chr7_1:73410278-73410297 | None:intergenic | 35.0% | |
| CTTAACTAACTTCACCTAGT+AGG | + | chr7_1:73410354-73410373 | None:intergenic | 35.0% | |
| CTACTAGGTGAAGTTAGTTA+AGG | - | chr7_1:73410352-73410371 | Msa1036910:intron | 35.0% | |
| GAAGTTAGTTAAGGCCTATT+TGG | - | chr7_1:73410361-73410380 | Msa1036910:intron | 35.0% | |
| TAGTTAAGGCCTATTTGGAT+TGG | - | chr7_1:73410366-73410385 | Msa1036910:intron | 35.0% | |
| TAAGAGCTTGTGAGATTGTT+TGG | - | chr7_1:73410403-73410422 | Msa1036910:intron | 35.0% | |
| AAGAGCTTGTGAGATTGTTT+GGG | - | chr7_1:73410404-73410423 | Msa1036910:intron | 35.0% | |
| ! | CTTATTTCTTAAAGCTCTCC+AGG | - | chr7_1:73410474-73410493 | Msa1036910:intron | 35.0% |
| TCTGATTTCTTAAGCTATCC+TGG | + | chr7_1:73410495-73410514 | None:intergenic | 35.0% | |
| !! | TGCATAAGCTATTTCTGTGA+CGG | + | chr7_1:73410527-73410546 | None:intergenic | 35.0% |
| ! | ATTAGTTTAAGAGGGTATGC+GGG | + | chr7_1:73410693-73410712 | None:intergenic | 35.0% |
| ACATTATCAAGAGAAACGTG+TGG | - | chr7_1:73410721-73410740 | Msa1036910:intron | 35.0% | |
| GTCTTCAGAAGGAAACATAA+TGG | + | chr7_1:73410755-73410774 | None:intergenic | 35.0% | |
| TGAAGTTCAGAAGTAGTTTC+AGG | + | chr7_1:73410777-73410796 | None:intergenic | 35.0% | |
| CAGACTGTCATGATTTCTTA+TGG | - | chr7_1:73410795-73410814 | Msa1036910:intron | 35.0% | |
| GTAAGATGGGAATGAATTCA+AGG | - | chr7_1:73410868-73410887 | Msa1036910:CDS | 35.0% | |
| ! | ATATCATCTGACAGTGCTTT+TGG | - | chr7_1:73411037-73411056 | Msa1036910:intron | 35.0% |
| AGAATACTGAAAATGTTGGC+AGG | - | chr7_1:73411132-73411151 | Msa1036910:CDS | 35.0% | |
| CTTGTAATTCGCGAAGAATT+TGG | - | chr7_1:73411253-73411272 | Msa1036910:intron | 35.0% | |
| TATATGGTTCACGATCTCAA+AGG | - | chr7_1:73411429-73411448 | Msa1036910:intron | 35.0% | |
| ACTTGGCACTCATTTACAAA+TGG | + | chr7_1:73411617-73411636 | None:intergenic | 35.0% | |
| TCAATAGGTAAGAGCAGAAA+TGG | + | chr7_1:73411640-73411659 | None:intergenic | 35.0% | |
| TGCTCTTACCTATTGATGTT+TGG | - | chr7_1:73411644-73411663 | Msa1036910:intron | 35.0% | |
| CTTACCTATTGATGTTTGGT+AGG | - | chr7_1:73411648-73411667 | Msa1036910:intron | 35.0% | |
| TGTTTGGTAGGAGTGAAAAT+AGG | - | chr7_1:73411660-73411679 | Msa1036910:intron | 35.0% | |
| TAGTAGATTGAACATAGTGC+AGG | - | chr7_1:73411697-73411716 | Msa1036910:intron | 35.0% | |
| !!! | CCTGGTTTTAAGTTCAATCA+TGG | + | chr7_1:73411761-73411780 | None:intergenic | 35.0% |
| CCATGATTGAACTTAAAACC+AGG | - | chr7_1:73411758-73411777 | Msa1036910:five_prime_UTR | 35.0% | |
| GAACTTAAAACCAGGATTTC+TGG | - | chr7_1:73411766-73411785 | Msa1036910:five_prime_UTR | 35.0% | |
| ! | CGGAACTTTAAAAGATTCGT+TGG | - | chr7_1:73411816-73411835 | Msa1036910:five_prime_UTR | 35.0% |
| ATGAACAGTTCACGAGTATA+TGG | + | chr7_1:73411868-73411887 | None:intergenic | 35.0% | |
| CTGATGATACAAGGTTTAGA+TGG | + | chr7_1:73411896-73411915 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAACCTTTGG+CGG | + | chr7_1:73408196-73408215 | None:intergenic | 40.0% | |
| GCAACAGATTGCTAATCTTC+AGG | - | chr7_1:73408804-73408823 | Msa1036910:intron | 40.0% | |
| TTGCTAATCTTCAGGGTAGT+CGG | - | chr7_1:73408812-73408831 | Msa1036910:intron | 40.0% | |
| CAAAGGGTTCAAGTGAACAA+TGG | + | chr7_1:73408873-73408892 | None:intergenic | 40.0% | |
| GGCAATGTCAGCTATGAATA+AGG | - | chr7_1:73409048-73409067 | Msa1036910:intron | 40.0% | |
| TACACCAGGTTTCCAAGAAA+GGG | - | chr7_1:73409172-73409191 | Msa1036910:intron | 40.0% | |
| !! | CAAGCTGAGAAGTTGTTTCT+AGG | - | chr7_1:73409232-73409251 | Msa1036910:intron | 40.0% |
| GATTTGAATCTGTGACATCC+AGG | - | chr7_1:73409254-73409273 | Msa1036910:intron | 40.0% | |
| TCATGAACTAACATGAGAGC+AGG | + | chr7_1:73409315-73409334 | None:intergenic | 40.0% | |
| TTTGTGCGAGTTTGATGGAA+TGG | - | chr7_1:73409515-73409534 | Msa1036910:intron | 40.0% | |
| AGAACTGCTATTATCAAGGC+TGG | + | chr7_1:73409724-73409743 | None:intergenic | 40.0% | |
| GTTGGATTCATTGCAGCAAA+TGG | - | chr7_1:73409832-73409851 | Msa1036910:CDS | 40.0% | |
| !! | ATAACTTTGGCTTGCTTTGC+TGG | + | chr7_1:73409860-73409879 | None:intergenic | 40.0% |
| AAAGCAAGCCAAAGTTATGC+AGG | - | chr7_1:73409862-73409881 | Msa1036910:CDS | 40.0% | |
| CTGGAATTCCTGCATAACTT+TGG | + | chr7_1:73409873-73409892 | None:intergenic | 40.0% | |
| GCAGGAATTCCAGAAACAAT+CGG | - | chr7_1:73409880-73409899 | Msa1036910:CDS | 40.0% | |
| AGATGTCATAGATGATGCCT+TGG | - | chr7_1:73410027-73410046 | Msa1036910:CDS | 40.0% | |
| TTCAGCTTCATCATCATCCA+AGG | + | chr7_1:73410047-73410066 | None:intergenic | 40.0% | |
| ACCTTGTGTTACAATCCTTG+AGG | - | chr7_1:73410227-73410246 | Msa1036910:intron | 40.0% | |
| CCTTGTGTTACAATCCTTGA+GGG | - | chr7_1:73410228-73410247 | Msa1036910:intron | 40.0% | |
| CTACCAAATCGTATCCTACT+AGG | - | chr7_1:73410337-73410356 | Msa1036910:intron | 40.0% | |
| TCACCTAGTAGGATACGATT+TGG | + | chr7_1:73410343-73410362 | None:intergenic | 40.0% | |
| ! | AGTAGTTTCAGGTCTTCAGA+AGG | + | chr7_1:73410766-73410785 | None:intergenic | 40.0% |
| ! | GGCTTTGTCACTTAGTTACA+AGG | - | chr7_1:73410816-73410835 | Msa1036910:intron | 40.0% |
| ! | TCACTTACCCTTTTCTTGAC+AGG | - | chr7_1:73410947-73410966 | Msa1036910:intron | 40.0% |
| TCAAGCACCTGTCAAGAAAA+GGG | + | chr7_1:73410957-73410976 | None:intergenic | 40.0% | |
| ATCAAGCACCTGTCAAGAAA+AGG | + | chr7_1:73410958-73410977 | None:intergenic | 40.0% | |
| TGACAGGTGCTTGATGAAAT+CGG | - | chr7_1:73410963-73410982 | Msa1036910:intron | 40.0% | |
| AAAGCTTATTCCTACCTGTG+AGG | + | chr7_1:73411000-73411019 | None:intergenic | 40.0% | |
| AGTTATCTTCAGCTCCCAAA+GGG | - | chr7_1:73411096-73411115 | Msa1036910:CDS | 40.0% | |
| AGGATAGGGAAAGAGTTACA+CGG | + | chr7_1:73411164-73411183 | None:intergenic | 40.0% | |
| CACTCCTACCAAACATCAAT+AGG | + | chr7_1:73411655-73411674 | None:intergenic | 40.0% | |
| TAGGAGTGAAAATAGGCAAG+AGG | - | chr7_1:73411667-73411686 | Msa1036910:intron | 40.0% | |
| GAAAATAGGCAAGAGGAGAA+CGG | - | chr7_1:73411674-73411693 | Msa1036910:intron | 40.0% | |
| !!! | AACCAGGATTTCTGGTGTTT+TGG | - | chr7_1:73411774-73411793 | Msa1036910:five_prime_UTR | 40.0% |
| TACCAAAACACCAGAAATCC+TGG | + | chr7_1:73411779-73411798 | None:intergenic | 40.0% | |
| GTATTCCACTAGAACTCACA+CGG | - | chr7_1:73411796-73411815 | Msa1036910:five_prime_UTR | 40.0% | |
| !!! | AGATTCGTTGGTTTTGTGGA+AGG | - | chr7_1:73411828-73411847 | Msa1036910:five_prime_UTR | 40.0% |
| !!! | TTGGTTTTGTGGAAGGTGAA+TGG | - | chr7_1:73411835-73411854 | Msa1036910:five_prime_UTR | 40.0% |
| TGCGGTATTGTCAACAACGA+AGG | + | chr7_1:73408146-73408165 | None:intergenic | 45.0% | |
| TGGTGAAGATGTTCATCGTG+CGG | + | chr7_1:73408164-73408183 | None:intergenic | 45.0% | |
| GAAATGACTAACGCCACTAG+AGG | - | chr7_1:73408313-73408332 | Msa1036910:three_prime_UTR | 45.0% | |
| AACTGCTAAGACAGGAAACG+AGG | - | chr7_1:73408584-73408603 | Msa1036910:intron | 45.0% | |
| TACTAGCTCGTCAGCTGATA+AGG | - | chr7_1:73408776-73408795 | Msa1036910:CDS | 45.0% | |
| TGCTAATCTTCAGGGTAGTC+GGG | - | chr7_1:73408813-73408832 | Msa1036910:intron | 45.0% | |
| GCACATTCTTCTGTTGCTGT+TGG | - | chr7_1:73409007-73409026 | Msa1036910:intron | 45.0% | |
| ! | TCTGTTGCTGTTGGCATGAA+AGG | - | chr7_1:73409016-73409035 | Msa1036910:intron | 45.0% |
| GTACACCAGGTTTCCAAGAA+AGG | - | chr7_1:73409171-73409190 | Msa1036910:intron | 45.0% | |
| ACACCAGGTTTCCAAGAAAG+GGG | - | chr7_1:73409173-73409192 | Msa1036910:intron | 45.0% | |
| CTGGGGAGGGTAAATCTATA+TGG | - | chr7_1:73409198-73409217 | Msa1036910:intron | 45.0% | |
| GCAAGTTTGTGCGAGTTTGA+TGG | - | chr7_1:73409510-73409529 | Msa1036910:intron | 45.0% | |
| ! | GGATGATGATGAAGCTGAAG+AGG | - | chr7_1:73410048-73410067 | Msa1036910:CDS | 45.0% |
| CCCTCAAGGATTGTAACACA+AGG | + | chr7_1:73410231-73410250 | None:intergenic | 45.0% | |
| ! | CTAAGCATTGCTAACCCTCA+AGG | + | chr7_1:73410245-73410264 | None:intergenic | 45.0% |
| !! | AGGGTGTTACTACCGAAGTT+AGG | + | chr7_1:73410290-73410309 | None:intergenic | 45.0% |
| AACTTCGGTAGTAACACCCT+TGG | - | chr7_1:73410290-73410309 | Msa1036910:intron | 45.0% | |
| ACTTCGGTAGTAACACCCTT+GGG | - | chr7_1:73410291-73410310 | Msa1036910:intron | 45.0% | |
| AGTTACATGGGTCATGCCAT+TGG | - | chr7_1:73410608-73410627 | Msa1036910:CDS | 45.0% | |
| GTTACATGGGTCATGCCATT+GGG | - | chr7_1:73410609-73410628 | Msa1036910:CDS | 45.0% | |
| CAAGATCATGGATAGCCCAA+TGG | + | chr7_1:73410627-73410646 | None:intergenic | 45.0% | |
| TTGGGCTATCCATGATCTTG+TGG | - | chr7_1:73410627-73410646 | Msa1036910:intron | 45.0% | |
| CAGTTATCTTCAGCTCCCAA+AGG | - | chr7_1:73411095-73411114 | Msa1036910:CDS | 45.0% | |
| TTTGCTGCGATTCTCCCTTT+GGG | + | chr7_1:73411113-73411132 | None:intergenic | 45.0% | |
| !! | TGATGACCTTGAGAAGCGTT+TGG | - | chr7_1:73411372-73411391 | Msa1036910:intron | 45.0% |
| CTGTAGTTGAGCCATAGTTG+TGG | - | chr7_1:73411571-73411590 | Msa1036910:intron | 45.0% | |
| ! | GGTAAGAGCAGAAATGGACT+TGG | + | chr7_1:73411634-73411653 | None:intergenic | 45.0% |
| ! | AAGTTCCGTGTGAGTTCTAG+TGG | + | chr7_1:73411804-73411823 | None:intergenic | 45.0% |
| !! | GTTAAATTAAATATATTAAA+AGG | + | chr7_1:73408481-73408500 | None:intergenic | 5.0% |
| GAAGAAGAACCTTTGGCGGT+GGG | + | chr7_1:73408192-73408211 | None:intergenic | 50.0% | |
| AGAAGAAGAACCTTTGGCGG+TGG | + | chr7_1:73408193-73408212 | None:intergenic | 50.0% | |
| CTCGTCAGCTGATAAGGCTT+AGG | - | chr7_1:73408782-73408801 | Msa1036910:CDS | 50.0% | |
| ! | GGTTGCTTGTCATTTCGTGC+AGG | - | chr7_1:73408976-73408995 | Msa1036910:intron | 50.0% |
| !! | TGGCATGAAAGGCGCTACTA+AGG | - | chr7_1:73409027-73409046 | Msa1036910:intron | 50.0% |
| AAAGGGTGGTCTAGTACACC+AGG | - | chr7_1:73409158-73409177 | Msa1036910:intron | 50.0% | |
| CACCAGGTTTCCAAGAAAGG+GGG | - | chr7_1:73409174-73409193 | Msa1036910:intron | 50.0% | |
| GTTTCCAAGAAAGGGGGTCT+GGG | - | chr7_1:73409180-73409199 | Msa1036910:intron | 50.0% | |
| TTTCCAAGAAAGGGGGTCTG+GGG | - | chr7_1:73409181-73409200 | Msa1036910:intron | 50.0% | |
| TGTGACATCCAGGTCACACA+AGG | - | chr7_1:73409264-73409283 | Msa1036910:intron | 50.0% | |
| ACTAACATGAGAGCAGGCCT+TGG | + | chr7_1:73409309-73409328 | None:intergenic | 50.0% | |
| TGTGTGTGCATGTGACAGGA+GGG | + | chr7_1:73409637-73409656 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGCATGTGAC+AGG | + | chr7_1:73409641-73409660 | None:intergenic | 50.0% | |
| CACACACACACACACACACA+CGG | - | chr7_1:73409649-73409668 | Msa1036910:intron | 50.0% | |
| ACACACACACACACACGGAA+AGG | - | chr7_1:73409660-73409679 | Msa1036910:intron | 50.0% | |
| CACACACACACACACGGAAA+GGG | - | chr7_1:73409661-73409680 | Msa1036910:intron | 50.0% | |
| !! | CCATCTGTGCCGATTGTTTC+TGG | + | chr7_1:73409892-73409911 | None:intergenic | 50.0% |
| CCAGAAACAATCGGCACAGA+TGG | - | chr7_1:73409889-73409908 | Msa1036910:intron | 50.0% | |
| CTTCGGTAGTAACACCCTTG+GGG | - | chr7_1:73410292-73410311 | Msa1036910:intron | 50.0% | |
| GTCGATATTGCCTCACAGGT+AGG | - | chr7_1:73410987-73411006 | Msa1036910:intron | 50.0% | |
| CTTTGCTGCGATTCTCCCTT+TGG | + | chr7_1:73411114-73411133 | None:intergenic | 50.0% | |
| !! | TGACCTTGAGAAGCGTTTGG+CGG | - | chr7_1:73411375-73411394 | Msa1036910:intron | 50.0% |
| ACCAAGAAACCCACCGCCAA+AGG | - | chr7_1:73408180-73408199 | Msa1036910:three_prime_UTR | 55.0% | |
| ! | ACCTTTGGCGGTGGGTTTCT+TGG | + | chr7_1:73408184-73408203 | None:intergenic | 55.0% |
| AGGCATAGCAACTCACACGC+AGG | - | chr7_1:73408846-73408865 | Msa1036910:intron | 55.0% | |
| GACCCCCTTTCTTGGAAACC+TGG | + | chr7_1:73409179-73409198 | None:intergenic | 55.0% | |
| GGTTTCCAAGAAAGGGGGTC+TGG | - | chr7_1:73409179-73409198 | Msa1036910:intron | 55.0% | |
| GCAACCTTGCGATTGTGCCA+AGG | - | chr7_1:73409289-73409308 | Msa1036910:intron | 55.0% | |
| GTGTGTGTGCATGTGACAGG+AGG | + | chr7_1:73409638-73409657 | None:intergenic | 55.0% | |
| !! | CGGTGTCGATATTGCCTCAC+AGG | - | chr7_1:73410983-73411002 | Msa1036910:intron | 55.0% |
| CTCTCACGAAGAGCCTCTGC+AGG | + | chr7_1:73408286-73408305 | None:intergenic | 60.0% | |
| GGTAGTCGGGCTCAGATGAG+AGG | - | chr7_1:73408826-73408845 | Msa1036910:intron | 60.0% | |
| CAAGAAAGGGGGTCTGGGGA+GGG | - | chr7_1:73409185-73409204 | Msa1036910:intron | 60.0% | |
| GGTTGCTGCCTTGTGTGACC+TGG | + | chr7_1:73409275-73409294 | None:intergenic | 60.0% | |
| CAGGCCTTGGCACAATCGCA+AGG | + | chr7_1:73409296-73409315 | None:intergenic | 60.0% | |
| GAGCCGCCAAACGCTTCTCA+AGG | + | chr7_1:73411381-73411400 | None:intergenic | 60.0% | |
| CCTCCCCAGACCCCCTTTCT+TGG | + | chr7_1:73409187-73409206 | None:intergenic | 65.0% | |
| CCAAGAAAGGGGGTCTGGGG+AGG | - | chr7_1:73409184-73409203 | Msa1036910:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 73407998 | 73411921 | 73407998 | ID=Msa1036910;Name=Msa1036910 |
| chr7_1 | mRNA | 73407998 | 73411921 | 73407998 | ID=Msa1036910-mRNA-1;Parent=Msa1036910;Name=Msa1036910-mRNA-1;_AED=0.13;_eAED=0.13;_QI=170|0.81|0.83|0.91|1|1|12|507|240 |
| chr7_1 | exon | 73407998 | 73408556 | 73407998 | ID=Msa1036910-mRNA-1:exon:18100;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73408766 | 73408821 | 73408766 | ID=Msa1036910-mRNA-1:exon:18099;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73408915 | 73408950 | 73408915 | ID=Msa1036910-mRNA-1:exon:18098;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73409826 | 73409906 | 73409826 | ID=Msa1036910-mRNA-1:exon:18097;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73410000 | 73410108 | 73410000 | ID=Msa1036910-mRNA-1:exon:18096;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73410597 | 73410643 | 73410597 | ID=Msa1036910-mRNA-1:exon:18095;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73410850 | 73410921 | 73410850 | ID=Msa1036910-mRNA-1:exon:18094;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73411052 | 73411156 | 73411052 | ID=Msa1036910-mRNA-1:exon:18093;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73411314 | 73411364 | 73411314 | ID=Msa1036910-mRNA-1:exon:18092;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73411463 | 73411497 | 73411463 | ID=Msa1036910-mRNA-1:exon:18091;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73411585 | 73411629 | 73411585 | ID=Msa1036910-mRNA-1:exon:18090;Parent=Msa1036910-mRNA-1 |
| chr7_1 | exon | 73411718 | 73411921 | 73411718 | ID=Msa1036910-mRNA-1:exon:18089;Parent=Msa1036910-mRNA-1 |
| chr7_1 | five_prime_UTR | 73411752 | 73411921 | 73411752 | ID=Msa1036910-mRNA-1:five_prime_utr;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73411718 | 73411751 | 73411718 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73411585 | 73411629 | 73411585 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73411463 | 73411497 | 73411463 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73411314 | 73411364 | 73411314 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73411052 | 73411156 | 73411052 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73410850 | 73410921 | 73410850 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73410597 | 73410643 | 73410597 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73410000 | 73410108 | 73410000 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73409826 | 73409906 | 73409826 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73408915 | 73408950 | 73408915 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73408766 | 73408821 | 73408766 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | CDS | 73408505 | 73408556 | 73408505 | ID=Msa1036910-mRNA-1:cds;Parent=Msa1036910-mRNA-1 |
| chr7_1 | three_prime_UTR | 73407998 | 73408504 | 73407998 | ID=Msa1036910-mRNA-1:three_prime_utr;Parent=Msa1036910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
