Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393430 | XP_003626830.1 | 97.115 | 208 | 6 | 0 | 1 | 208 | 1 | 208 | 4.81e-146 | 415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393430 | sp|O04905|KCY3_ARATH | 80.769 | 208 | 33 | 2 | 1 | 208 | 1 | 201 | 5.91e-122 | 346 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393430 | B7FMF1 | 97.115 | 208 | 6 | 0 | 1 | 208 | 1 | 208 | 2.30e-146 | 415 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa1393430 | 0.812483 | 4.144111e-51 | -8.615850e-47 |
| Msa0028930 | Msa1393430 | 0.806398 | 8.389021e-50 | -8.615850e-47 |
| Msa0033880 | Msa1393430 | 0.836482 | 9.118432e-57 | -8.615850e-47 |
| Msa0047640 | Msa1393430 | 0.811275 | 7.593634e-51 | -8.615850e-47 |
| Msa0056270 | Msa1393430 | 0.813663 | 2.283500e-51 | -8.615850e-47 |
| Msa0081650 | Msa1393430 | 0.833850 | 4.208123e-56 | -8.615850e-47 |
| Msa0105520 | Msa1393430 | 0.818282 | 2.126243e-52 | -8.615850e-47 |
| Msa0106620 | Msa1393430 | 0.817419 | 3.330157e-52 | -8.615850e-47 |
| Msa0106710 | Msa1393430 | 0.801401 | 9.161298e-49 | -8.615850e-47 |
| Msa1349520 | Msa1393430 | 0.807744 | 4.352555e-50 | -8.615850e-47 |
| Msa1356610 | Msa1393430 | 0.805921 | 1.056674e-49 | -8.615850e-47 |
| Msa1369890 | Msa1393430 | 0.879610 | 1.082966e-69 | -8.615850e-47 |
| Msa1374170 | Msa1393430 | 0.800288 | 1.546279e-48 | -8.615850e-47 |
| Msa1376200 | Msa1393430 | 0.800432 | 1.445443e-48 | -8.615850e-47 |
| Msa1383740 | Msa1393430 | 0.808056 | 3.735185e-50 | -8.615850e-47 |
| Msa1393430 | Msa1411950 | 0.824195 | 9.206621e-54 | -8.615850e-47 |
| Msa1393430 | Msa1421560 | 0.810141 | 1.336106e-50 | -8.615850e-47 |
| Msa1393430 | Msa1435440 | 0.914655 | 1.484729e-84 | -8.615850e-47 |
| Msa1393430 | Msa1450720 | 0.809187 | 2.141606e-50 | -8.615850e-47 |
| Msa1393430 | Msa1458810 | 0.820690 | 6.003915e-53 | -8.615850e-47 |
| Msa0618950 | Msa1393430 | 0.847500 | 1.111982e-59 | -8.615850e-47 |
| Msa0618970 | Msa1393430 | 0.836211 | 1.068530e-56 | -8.615850e-47 |
| Msa0628420 | Msa1393430 | 0.827880 | 1.225137e-54 | -8.615850e-47 |
| Msa0633570 | Msa1393430 | 0.804518 | 2.078347e-49 | -8.615850e-47 |
| Msa0652690 | Msa1393430 | 0.803062 | 4.169273e-49 | -8.615850e-47 |
| Msa0656580 | Msa1393430 | 0.802106 | 6.565062e-49 | -8.615850e-47 |
| Msa0658590 | Msa1393430 | 0.809570 | 1.772309e-50 | -8.615850e-47 |
| Msa0673270 | Msa1393430 | 0.812596 | 3.915807e-51 | -8.615850e-47 |
| Msa0697720 | Msa1393430 | 0.807175 | 5.747904e-50 | -8.615850e-47 |
| Msa0700860 | Msa1393430 | 0.804119 | 2.517018e-49 | -8.615850e-47 |
| Msa0700920 | Msa1393430 | 0.809050 | 2.291606e-50 | -8.615850e-47 |
| Msa0705390 | Msa1393430 | 0.829237 | 5.761256e-55 | -8.615850e-47 |
| Msa0712560 | Msa1393430 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
| Msa0744100 | Msa1393430 | 0.803846 | 2.868779e-49 | -8.615850e-47 |
| Msa0788120 | Msa1393430 | 0.831909 | 1.277569e-55 | -8.615850e-47 |
| Msa0825270 | Msa1393430 | 0.810785 | 9.696134e-51 | -8.615850e-47 |
| Msa0828680 | Msa1393430 | 0.805856 | 1.090705e-49 | -8.615850e-47 |
| Msa0127040 | Msa1393430 | 0.812633 | 3.842920e-51 | -8.615850e-47 |
| Msa0127850 | Msa1393430 | 0.847884 | 8.717143e-60 | -8.615850e-47 |
| Msa0146080 | Msa1393430 | 0.802795 | 4.734047e-49 | -8.615850e-47 |
| Msa0174000 | Msa1393430 | 0.822117 | 2.812345e-53 | -8.615850e-47 |
| Msa0194170 | Msa1393430 | 0.806303 | 8.782542e-50 | -8.615850e-47 |
| Msa1226470 | Msa1393430 | 0.811142 | 8.116147e-51 | -8.615850e-47 |
| Msa1229620 | Msa1393430 | 0.928792 | 1.749154e-92 | -8.615850e-47 |
| Msa1258780 | Msa1393430 | 0.841346 | 5.023629e-58 | -8.615850e-47 |
| Msa1271780 | Msa1393430 | 0.847223 | 1.324879e-59 | -8.615850e-47 |
| Msa1310230 | Msa1393430 | 0.928122 | 4.506127e-92 | -8.615850e-47 |
| Msa1315750 | Msa1393430 | 0.828870 | 7.068634e-55 | -8.615850e-47 |
| Msa1330270 | Msa1393430 | 0.849295 | 3.545045e-60 | -8.615850e-47 |
| Msa0378970 | Msa1393430 | 0.818958 | 1.493618e-52 | -8.615850e-47 |
| Msa0421880 | Msa1393430 | 0.809002 | 2.346360e-50 | -8.615850e-47 |
| Msa0430060 | Msa1393430 | 0.808477 | 3.038436e-50 | -8.615850e-47 |
| Msa0430150 | Msa1393430 | 0.807093 | 5.981954e-50 | -8.615850e-47 |
| Msa0474940 | Msa1393430 | 0.802205 | 6.265966e-49 | -8.615850e-47 |
| Msa0480780 | Msa1393430 | 0.814872 | 1.234529e-51 | -8.615850e-47 |
| Msa0981430 | Msa1393430 | 0.801275 | 9.721776e-49 | -8.615850e-47 |
| Msa0997430 | Msa1393430 | 0.813401 | 2.607452e-51 | -8.615850e-47 |
| Msa1072710 | Msa1393430 | 0.812391 | 4.340297e-51 | -8.615850e-47 |
| Msa0244970 | Msa1393430 | 0.825689 | 4.088355e-54 | -8.615850e-47 |
| Msa0244980 | Msa1393430 | 0.815342 | 9.709418e-52 | -8.615850e-47 |
| Msa0314420 | Msa1393430 | 0.803701 | 3.074477e-49 | -8.615850e-47 |
| Msa0321690 | Msa1393430 | 0.827606 | 1.426134e-54 | -8.615850e-47 |
| Msa0322900 | Msa1393430 | 0.807332 | 5.322949e-50 | -8.615850e-47 |
| Msa0324240 | Msa1393430 | 0.802672 | 5.020051e-49 | -8.615850e-47 |
| Msa0363060 | Msa1393430 | 0.814496 | 1.495895e-51 | -8.615850e-47 |
| Msa1123350 | Msa1393430 | 0.820768 | 5.760853e-53 | -8.615850e-47 |
| Msa1132480 | Msa1393430 | 0.807573 | 4.732854e-50 | -8.615850e-47 |
| Msa1133400 | Msa1393430 | 0.815478 | 9.055988e-52 | -8.615850e-47 |
| Msa1162080 | Msa1393430 | 0.801114 | 1.048885e-48 | -8.615850e-47 |
| Msa1201640 | Msa1393430 | 0.813594 | 2.365074e-51 | -8.615850e-47 |
| Msa0523050 | Msa1393430 | 0.817461 | 3.259149e-52 | -8.615850e-47 |
| Msa0531250 | Msa1393430 | 0.831116 | 2.003485e-55 | -8.615850e-47 |
| Msa0531650 | Msa1393430 | 0.801018 | 1.097228e-48 | -8.615850e-47 |
| Msa0538800 | Msa1393430 | 0.812834 | 3.472184e-51 | -8.615850e-47 |
| Msa0544730 | Msa1393430 | 0.807729 | 4.384859e-50 | -8.615850e-47 |
| Msa0554290 | Msa1393430 | 0.829093 | 6.240952e-55 | -8.615850e-47 |
| Msa0560500 | Msa1393430 | 0.844356 | 7.952115e-59 | -8.615850e-47 |
| Msa0588090 | Msa1393430 | 0.834703 | 2.571755e-56 | -8.615850e-47 |
| Msa0593700 | Msa1393430 | 0.810544 | 1.093647e-50 | -8.615850e-47 |
| Msa0859180 | Msa1393430 | 0.818528 | 1.870559e-52 | -8.615850e-47 |
| Msa0864420 | Msa1393430 | 0.815812 | 7.631100e-52 | -8.615850e-47 |
| Msa0880040 | Msa1393430 | 0.804964 | 1.677346e-49 | -8.615850e-47 |
| Msa0944660 | Msa1393430 | 0.801361 | 9.337086e-49 | -8.615850e-47 |
| Msa0945240 | Msa1393430 | 0.816433 | 5.543835e-52 | -8.615850e-47 |
| Msa0968440 | Msa1393430 | 0.840744 | 7.229704e-58 | -8.615850e-47 |
| Msa0970530 | Msa1393430 | 0.813173 | 2.926029e-51 | -8.615850e-47 |
| Msa0970600 | Msa1393430 | 0.815440 | 9.233007e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393430 | MtrunA17_Chr8g0337051 | 97.115 | 208 | 6 | 0 | 1 | 208 | 1 | 208 | 4.42e-150 | 415 |
| Msa1393430 | MtrunA17_Chr5g0428971 | 60.753 | 186 | 73 | 0 | 22 | 207 | 32 | 217 | 2.76e-81 | 241 |
| Msa1393430 | MtrunA17_Chr4g0018221 | 60.753 | 186 | 73 | 0 | 22 | 207 | 55 | 240 | 7.14e-81 | 241 |
| Msa1393430 | MtrunA17_Chr4g0017231 | 34.375 | 128 | 81 | 2 | 19 | 144 | 85 | 211 | 8.46e-24 | 96.3 |
| Msa1393430 | MtrunA17_Chr2g0305051 | 27.803 | 223 | 129 | 5 | 6 | 201 | 59 | 276 | 8.51e-24 | 98.6 |
| Msa1393430 | MtrunA17_Chr4g0057771 | 26.066 | 211 | 123 | 4 | 24 | 201 | 32 | 242 | 7.58e-20 | 84.3 |
| Msa1393430 | MtrunA17_Chr1g0181801 | 25.888 | 197 | 101 | 4 | 27 | 180 | 117 | 311 | 6.53e-16 | 75.1 |
| Msa1393430 | MtrunA17_Chr7g0263541 | 24.424 | 217 | 122 | 4 | 18 | 193 | 34 | 249 | 1.19e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393430 | AT5G26667.3 | 80.769 | 208 | 33 | 2 | 1 | 208 | 1 | 201 | 6.01e-123 | 346 |
| Msa1393430 | AT5G26667.2 | 80.769 | 208 | 33 | 2 | 1 | 208 | 1 | 201 | 6.01e-123 | 346 |
| Msa1393430 | AT5G26667.4 | 80.769 | 208 | 33 | 2 | 1 | 208 | 1 | 201 | 6.01e-123 | 346 |
| Msa1393430 | AT5G26667.1 | 81.553 | 206 | 31 | 2 | 1 | 206 | 1 | 199 | 1.03e-122 | 346 |
| Msa1393430 | AT3G60180.1 | 71.642 | 201 | 57 | 0 | 1 | 201 | 1 | 201 | 1.67e-108 | 310 |
| Msa1393430 | AT3G60180.2 | 71.642 | 201 | 57 | 0 | 1 | 201 | 1 | 201 | 1.67e-108 | 310 |
| Msa1393430 | AT4G25280.1 | 60.109 | 183 | 73 | 0 | 19 | 201 | 51 | 233 | 1.19e-78 | 236 |
| Msa1393430 | AT4G25280.2 | 60.109 | 183 | 73 | 0 | 19 | 201 | 51 | 233 | 1.19e-78 | 236 |
| Msa1393430 | AT3G60961.1 | 68.421 | 133 | 38 | 1 | 73 | 201 | 1 | 133 | 5.75e-66 | 199 |
| Msa1393430 | AT5G35170.2 | 29.665 | 209 | 117 | 4 | 20 | 201 | 78 | 283 | 4.32e-27 | 108 |
| Msa1393430 | AT5G35170.1 | 29.665 | 209 | 117 | 4 | 20 | 201 | 78 | 283 | 5.06e-27 | 108 |
| Msa1393430 | AT5G47840.1 | 30.144 | 209 | 116 | 4 | 20 | 201 | 63 | 268 | 1.81e-26 | 103 |
| Msa1393430 | AT5G47840.2 | 37.008 | 127 | 77 | 2 | 20 | 144 | 63 | 188 | 6.45e-26 | 101 |
| Msa1393430 | AT5G63400.1 | 27.488 | 211 | 120 | 4 | 24 | 201 | 36 | 246 | 1.63e-20 | 86.7 |
| Msa1393430 | AT5G50370.1 | 27.723 | 202 | 112 | 5 | 23 | 191 | 37 | 237 | 4.83e-18 | 80.1 |
| Msa1393430 | AT2G37250.1 | 25.238 | 210 | 112 | 3 | 27 | 193 | 57 | 264 | 3.05e-16 | 75.5 |
| Msa1393430 | AT2G39270.1 | 27.411 | 197 | 98 | 4 | 27 | 180 | 70 | 264 | 2.75e-15 | 73.2 |
| Msa1393430 | AT5G63400.2 | 31.200 | 125 | 82 | 2 | 24 | 144 | 36 | 160 | 6.14e-14 | 67.8 |
| Msa1393430 | AT5G50370.2 | 27.072 | 181 | 98 | 5 | 23 | 170 | 37 | 216 | 7.68e-14 | 68.2 |
Find 83 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGAATCAGTTTGATTTAA+TGG | 0.106693 | tig0021673:+106553 | None:intergenic |
| ATCAAATCTGGCTCCGAAAA+TGG | 0.173136 | tig0021673:-110245 | Msa1393430:CDS |
| TTTAGTCGGTAGGGGTTAAA+TGG | 0.194002 | tig0021673:+113323 | None:intergenic |
| TTCCTTCTTTAATCATATTC+TGG | 0.194476 | tig0021673:+109914 | None:intergenic |
| GCAAATGTTGTCGAACATTT+TGG | 0.209865 | tig0021673:-110308 | Msa1393430:CDS |
| CGTCTCTCCATTTCTTCCTC+TGG | 0.293885 | tig0021673:+109621 | None:intergenic |
| AATGACAAATTTCTTATTGA+TGG | 0.306611 | tig0021673:-109832 | Msa1393430:CDS |
| TTCGACAACATTTGCACATT+GGG | 0.333869 | tig0021673:+110316 | None:intergenic |
| ATCGTTGAAGGTATTTATAT+TGG | 0.359065 | tig0021673:+113280 | None:intergenic |
| ACGACAACATTGAAACAATA+AGG | 0.372468 | tig0021673:-109474 | Msa1393430:CDS |
| CCTACAGTTGTGTTTGTGTT+AGG | 0.377583 | tig0021673:-110977 | Msa1393430:intron |
| CTCCAGAATTTGAAAATGTT+GGG | 0.382498 | tig0021673:+106621 | None:intergenic |
| CCTCTGGGCAATCAAAATAT+AGG | 0.386242 | tig0021673:+109637 | None:intergenic |
| GAGAAATTGTTGTTATGGTT+AGG | 0.392336 | tig0021673:+113257 | None:intergenic |
| GTCTCTCCATTTCTTCCTCT+GGG | 0.403856 | tig0021673:+109622 | None:intergenic |
| CTGCGAGCGGAAATCAAATC+TGG | 0.406089 | tig0021673:-110257 | Msa1393430:CDS |
| AATCTGAGAAATTGTTGTTA+TGG | 0.408867 | tig0021673:+113252 | None:intergenic |
| TGATTGCCCAGAGGAAGAAA+TGG | 0.417731 | tig0021673:-109628 | Msa1393430:CDS |
| GACTCAAATACCTCCTCAAC+AGG | 0.418858 | tig0021673:+109276 | None:intergenic |
| ACTCCAGAATTTGAAAATGT+TGG | 0.420168 | tig0021673:+106620 | None:intergenic |
| TTAGTCGGTAGGGGTTAAAT+GGG | 0.427969 | tig0021673:+113324 | None:intergenic |
| TGATAATGGTACAGGTGGTC+CGG | 0.428269 | tig0021673:-110354 | Msa1393430:intron |
| TTCCTTCCGAGGTAACAATT+AGG | 0.429145 | tig0021673:-109885 | Msa1393430:CDS |
| ATTAATTATTATGATGCAAA+GGG | 0.443787 | tig0021673:-109412 | Msa1393430:CDS |
| AACAATAAGGAAGCGATTCA+AGG | 0.444129 | tig0021673:-109461 | Msa1393430:CDS |
| TCAAATCTGGCTCCGAAAAT+GGG | 0.446253 | tig0021673:-110244 | Msa1393430:intron |
| GGGTTTACTCACCTCAGTGC+TGG | 0.448432 | tig0021673:-110287 | Msa1393430:CDS |
| TTGCGTGCTGGATATTTAAG+AGG | 0.450042 | tig0021673:-108279 | Msa1393430:intron |
| GGTACAGGTGGTCCGGGCAG+TGG | 0.454545 | tig0021673:-110347 | Msa1393430:intron |
| AGTGTGTAAGTGCCCTTTGT+GGG | 0.455214 | tig0021673:-106600 | Msa1393430:three_prime_UTR |
| ATTTATTTGTAGGATACAAA+TGG | 0.459331 | tig0021673:-111019 | Msa1393430:intron |
| AATATAGAGGCAACAACCTC+AGG | 0.460417 | tig0021673:+106721 | None:intergenic |
| ATATTGGTGTTAAGAAAGTT+CGG | 0.460947 | tig0021673:+113296 | None:intergenic |
| TTCTCTCCTCTTTCGCGCAA+AGG | 0.464330 | tig0021673:-113239 | Msa1393430:five_prime_UTR |
| TAAAATTTCGTATGGAGTAA+TGG | 0.466516 | tig0021673:+113351 | None:intergenic |
| TGGAGAGACGACTTCTTAGT+AGG | 0.467613 | tig0021673:-109608 | Msa1393430:CDS |
| GGTGGTCCGGGCAGTGGAAA+AGG | 0.473432 | tig0021673:-110341 | Msa1393430:CDS |
| AAATATCCAGCACGCAATCA+AGG | 0.478107 | tig0021673:+108285 | None:intergenic |
| GCGTTACCTTTGCGCGAAAG+AGG | 0.492811 | tig0021673:+113214 | None:intergenic |
| TCAAAATATAGGACAAATGT+TGG | 0.497184 | tig0021673:+109648 | None:intergenic |
| ATCCAGAATATGATTAAAGA+AGG | 0.504467 | tig0021673:-109916 | Msa1393430:CDS |
| TGGGAAAATAAAATTTCGTA+TGG | 0.508074 | tig0021673:+113343 | None:intergenic |
| ATATCTAGCAACAAAATATG+AGG | 0.509211 | tig0021673:+106762 | None:intergenic |
| TGATTCTTATGTTCATTCGA+TGG | 0.509409 | tig0021673:-106539 | None:intergenic |
| GTTATGGTTAGGATCGTTGA+AGG | 0.512352 | tig0021673:+113268 | None:intergenic |
| GCATCATAATAATTAATCAC+AGG | 0.514630 | tig0021673:+109418 | None:intergenic |
| TGCCCTTTGTGGGTTTGTAG+TGG | 0.517614 | tig0021673:-106590 | Msa1393430:three_prime_UTR |
| AGTGTAGTTGATATTACTCA+TGG | 0.518202 | tig0021673:-111704 | Msa1393430:exon |
| GGTGCAACAATAGAATATAG+AGG | 0.520858 | tig0021673:+106708 | None:intergenic |
| GATAATGGTACAGGTGGTCC+GGG | 0.533653 | tig0021673:-110353 | Msa1393430:intron |
| AGCCTAATTGTTACCTCGGA+AGG | 0.535061 | tig0021673:+109883 | None:intergenic |
| GAGTGTGTAAGTGCCCTTTG+TGG | 0.535947 | tig0021673:-106601 | Msa1393430:three_prime_UTR |
| GTCCACTACAAACCCACAAA+GGG | 0.537093 | tig0021673:+106588 | None:intergenic |
| GTAATGGAAGGAAAGGGAGG+TGG | 0.538102 | tig0021673:+113367 | None:intergenic |
| GTTCGACAACATTTGCACAT+TGG | 0.539900 | tig0021673:+110315 | None:intergenic |
| GTATGGAGTAATGGAAGGAA+AGG | 0.543753 | tig0021673:+113360 | None:intergenic |
| GATTAATTATTATGATGCAA+AGG | 0.546499 | tig0021673:-109413 | Msa1393430:CDS |
| TTGTTTGAGTTATTTAAGCA+CGG | 0.546632 | tig0021673:-106654 | Msa1393430:three_prime_UTR |
| ATTTGATTTCCGCTCGCAGA+AGG | 0.550406 | tig0021673:+110261 | None:intergenic |
| CAGAAGCCTAATTGTTACCT+CGG | 0.555573 | tig0021673:+109879 | None:intergenic |
| GGAGTAATGGAAGGAAAGGG+AGG | 0.556953 | tig0021673:+113364 | None:intergenic |
| TGTTTGAGTTATTTAAGCAC+GGG | 0.562756 | tig0021673:-106653 | Msa1393430:three_prime_UTR |
| TGTTATTGAAGCTGCAAACA+AGG | 0.570574 | tig0021673:-111677 | Msa1393430:intron |
| CCGTGCAGCATTTGAGAGAG+TGG | 0.571248 | tig0021673:-109788 | Msa1393430:intron |
| TGCTGGTGACCTTCTGCGAG+CGG | 0.575371 | tig0021673:-110270 | Msa1393430:CDS |
| CATCATAATAATTAATCACA+GGG | 0.576231 | tig0021673:+109419 | None:intergenic |
| CCTAACACAAACACAACTGT+AGG | 0.576692 | tig0021673:+110977 | None:intergenic |
| ATTTCGTATGGAGTAATGGA+AGG | 0.578668 | tig0021673:+113355 | None:intergenic |
| TATGGAGTAATGGAAGGAAA+GGG | 0.582559 | tig0021673:+113361 | None:intergenic |
| TGTTGCCCTTGATTGCGTGC+TGG | 0.583464 | tig0021673:-108291 | Msa1393430:three_prime_UTR |
| AATATCCAGCACGCAATCAA+GGG | 0.591954 | tig0021673:+108286 | None:intergenic |
| TGTTGAGGAGGTATTTGAGT+CGG | 0.603618 | tig0021673:-109274 | Msa1393430:CDS |
| AGGTGGTTGCGTGATAGTAA+CGG | 0.605517 | tig0021673:+113384 | None:intergenic |
| TGCTGCAAGGCCTGTTGAGG+AGG | 0.615003 | tig0021673:-109286 | Msa1393430:CDS |
| GGTCCACTACAAACCCACAA+AGG | 0.618270 | tig0021673:+106587 | None:intergenic |
| CCACTCTCTCAAATGCTGCA+CGG | 0.625742 | tig0021673:+109788 | None:intergenic |
| TGATGCTGCAAGGCCTGTTG+AGG | 0.626580 | tig0021673:-109289 | Msa1393430:CDS |
| TGCAAAGGGAAAAGTTCGCA+AGG | 0.641623 | tig0021673:-109398 | Msa1393430:intron |
| ACGACTTCTTAGTAGGAACC+AGG | 0.649336 | tig0021673:-109601 | Msa1393430:intron |
| GTGTAGTTGATATTACTCAT+GGG | 0.660018 | tig0021673:-111703 | Msa1393430:exon |
| CAACAAGCAATGCAAGACAG+TGG | 0.683184 | tig0021673:-109856 | Msa1393430:CDS |
| TATAAATGAATGAGTCGACA+AGG | 0.689782 | tig0021673:+106687 | None:intergenic |
| GCAGAAGGTCACCAGCACTG+AGG | 0.757069 | tig0021673:+110276 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | tig0021673:112392-112411 | None:intergenic | 0.0% |
| !! | AATTCATTTACATAAAATTA+GGG | + | tig0021673:108065-108084 | None:intergenic | 10.0% |
| !! | TAATTCATTTACATAAAATT+AGG | + | tig0021673:108066-108085 | None:intergenic | 10.0% |
| !! | TTTACATAAATAATTTATCT+TGG | - | tig0021673:108211-108230 | Msa1393430:intron | 10.0% |
| !!! | TATAATTCTTTTTTTTTTTG+CGG | + | tig0021673:108588-108607 | None:intergenic | 10.0% |
| !! | TAAAATATGATAAAGTAAAA+GGG | + | tig0021673:111027-111046 | None:intergenic | 10.0% |
| !! | ATAAAATATGATAAAGTAAA+AGG | + | tig0021673:111028-111047 | None:intergenic | 10.0% |
| !! | TTAAATTTAAATAAAGATAC+TGG | - | tig0021673:111186-111205 | Msa1393430:intron | 10.0% |
| !!! | AAAATTTTGAAAATGATATT+GGG | - | tig0021673:111395-111414 | Msa1393430:intron | 10.0% |
| !! | AATATAGTAAGTTAATATTA+TGG | - | tig0021673:112973-112992 | Msa1393430:intron | 10.0% |
| !!! | TGAATTTTTAACATTGATTA+GGG | - | tig0021673:107335-107354 | Msa1393430:intron | 15.0% |
| !! | ATATGTAGATTTAATATGAT+AGG | - | tig0021673:107887-107906 | Msa1393430:intron | 15.0% |
| !! | ATTCATTTACATAAAATTAG+GGG | + | tig0021673:108064-108083 | None:intergenic | 15.0% |
| !! | TTATGTAAATGAATTATGAT+TGG | - | tig0021673:108070-108089 | Msa1393430:intron | 15.0% |
| !! | AATTATTTATGTAAAGAATC+AGG | + | tig0021673:108206-108225 | None:intergenic | 15.0% |
| !! | TCTATAGAATTATAGAATTT+GGG | - | tig0021673:108445-108464 | Msa1393430:intron | 15.0% |
| !! | AAGAATTAAATAATATGGTT+TGG | - | tig0021673:108678-108697 | Msa1393430:intron | 15.0% |
| !! | TGAATTCTATAATTAAACAA+AGG | + | tig0021673:108822-108841 | None:intergenic | 15.0% |
| !! | TATTGATCTAATAATGATAA+TGG | - | tig0021673:109616-109635 | Msa1393430:CDS | 15.0% |
| !! | ATTAATTATTATGATGCAAA+GGG | - | tig0021673:110572-110591 | Msa1393430:intron | 15.0% |
| !!! | CAAAATTTTGAAAATGATAT+TGG | - | tig0021673:111394-111413 | Msa1393430:intron | 15.0% |
| !! | ATGACAAAATAAAATGTATA+GGG | + | tig0021673:111738-111757 | None:intergenic | 15.0% |
| !! | TATGACAAAATAAAATGTAT+AGG | + | tig0021673:111739-111758 | None:intergenic | 15.0% |
| !!! | TATTTTTTCCATTTTTTTTC+AGG | - | tig0021673:113170-113189 | Msa1393430:intron | 15.0% |
| !! | GATTTAATGGTTAAAAATAT+TGG | + | tig0021673:113421-113440 | None:intergenic | 15.0% |
| !!! | TGAAATTTTCAACATTGATT+AGG | - | tig0021673:106998-107017 | Msa1393430:intron | 20.0% |
| !!! | GTTATTTTTTCACATTGATT+AGG | - | tig0021673:107112-107131 | Msa1393430:intron | 20.0% |
| !!! | CTGAATTTTTAACATTGATT+AGG | - | tig0021673:107334-107353 | Msa1393430:intron | 20.0% |
| !!! | TGAATTTTTTGACACTAATT+AGG | - | tig0021673:107439-107458 | Msa1393430:intron | 20.0% |
| !!! | GAATTTTTTGACACTAATTA+GGG | - | tig0021673:107440-107459 | Msa1393430:intron | 20.0% |
| !! | TATCTGCAAATAAAGAAATA+CGG | + | tig0021673:108255-108274 | None:intergenic | 20.0% |
| !!! | AATCAGATTTTCAAAAGAAA+CGG | + | tig0021673:108393-108412 | None:intergenic | 20.0% |
| !! | CTCTATAGAATTATAGAATT+TGG | - | tig0021673:108444-108463 | Msa1393430:intron | 20.0% |
| !! | TTAATCACTTATTTGATTGT+AGG | - | tig0021673:108885-108904 | Msa1393430:intron | 20.0% |
| !! | TCAATTCTTCATTTATTTGT+AGG | - | tig0021673:108955-108974 | Msa1393430:intron | 20.0% |
| !! | ATTTATTTGTAGGATACAAA+TGG | - | tig0021673:108965-108984 | Msa1393430:intron | 20.0% |
| !!! | ACTGCTTGTTATAAATAAAT+TGG | + | tig0021673:109139-109158 | None:intergenic | 20.0% |
| !!! | GCTTTTTTATGTTTATCTTA+AGG | + | tig0021673:109394-109413 | None:intergenic | 20.0% |
| !!! | ATATAATTTGTACCCATTTT+CGG | + | tig0021673:109755-109774 | None:intergenic | 20.0% |
| !! | ACTATTTCAAAAGAAGAAAA+GGG | + | tig0021673:109826-109845 | None:intergenic | 20.0% |
| !! | TACTATTTCAAAAGAAGAAA+AGG | + | tig0021673:109827-109846 | None:intergenic | 20.0% |
| !!! | TCTTCTTTTGAAATAGTAAA+TGG | - | tig0021673:109829-109848 | Msa1393430:CDS | 20.0% |
| !! | AATTTCTATGTATTTATGCT+AGG | - | tig0021673:109914-109933 | Msa1393430:CDS | 20.0% |
| !! | AATGACAAATTTCTTATTGA+TGG | - | tig0021673:110152-110171 | Msa1393430:intron | 20.0% |
| !! | CATCATAATAATTAATCACA+GGG | + | tig0021673:110568-110587 | None:intergenic | 20.0% |
| !! | GATTAATTATTATGATGCAA+AGG | - | tig0021673:110571-110590 | Msa1393430:intron | 20.0% |
| !!! | ATTTTCTCTTTGATAGAAAA+TGG | + | tig0021673:110815-110834 | None:intergenic | 20.0% |
| !! | TTTCTATCAAAGAGAAAATT+TGG | - | tig0021673:110816-110835 | Msa1393430:intron | 20.0% |
| !! | TTTATTTAAAAACTCATGCA+AGG | + | tig0021673:110930-110949 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTACAATGCATTA+TGG | - | tig0021673:111046-111065 | Msa1393430:intron | 20.0% |
| !! | ATTAAGAACAATATTAACAG+TGG | - | tig0021673:111100-111119 | Msa1393430:intron | 20.0% |
| !! | AATTATAATTTCAATGTGCT+TGG | + | tig0021673:111554-111573 | None:intergenic | 20.0% |
| !! | ACAAAAAAATATTACTGAGT+GGG | - | tig0021673:111821-111840 | Msa1393430:intron | 20.0% |
| !!! | TAGATTAGATATTTTGTTGA+TGG | - | tig0021673:112078-112097 | Msa1393430:intron | 20.0% |
| !! | TGAAATTGATAAGAAAAGAA+AGG | - | tig0021673:112129-112148 | Msa1393430:intron | 20.0% |
| !!! | AATCCATATAATAAGCTTTT+TGG | + | tig0021673:112362-112381 | None:intergenic | 20.0% |
| !! | AAGTTAATAAATACACCTTA+AGG | + | tig0021673:112714-112733 | None:intergenic | 20.0% |
| !! | ATATACAATTCATATCAAAC+TGG | - | tig0021673:112805-112824 | Msa1393430:intron | 20.0% |
| !!! | AATTATAGATTTTGTATGCT+CGG | - | tig0021673:112904-112923 | Msa1393430:intron | 20.0% |
| !!! | TTAGATTTGTGAAGTATTTT+AGG | - | tig0021673:112946-112965 | Msa1393430:intron | 20.0% |
| !! | TCATTTGTTTATTATTGCAT+TGG | - | tig0021673:113052-113071 | Msa1393430:intron | 20.0% |
| !!! | TATTATTGCATTGGTTTTTA+TGG | - | tig0021673:113061-113080 | Msa1393430:intron | 20.0% |
| !!! | AAAAATGTATTTTATACCTG+AGG | - | tig0021673:113247-113266 | Msa1393430:five_prime_UTR | 20.0% |
| !!! | TAAGAATCAGTTTGATTTAA+TGG | + | tig0021673:113434-113453 | None:intergenic | 20.0% |
| !!! | ATAGTAACGGCTTTAATTTT+CGG | + | tig0021673:106590-106609 | None:intergenic | 25.0% |
| ! | TAAAATTTCGTATGGAGTAA+TGG | + | tig0021673:106636-106655 | None:intergenic | 25.0% |
| ! | TGGGAAAATAAAATTTCGTA+TGG | + | tig0021673:106644-106663 | None:intergenic | 25.0% |
| !!! | ATATTGGTGTTAAGAAAGTT+CGG | + | tig0021673:106691-106710 | None:intergenic | 25.0% |
| !!! | ATCGTTGAAGGTATTTATAT+TGG | + | tig0021673:106707-106726 | None:intergenic | 25.0% |
| !! | AATCTGAGAAATTGTTGTTA+TGG | + | tig0021673:106735-106754 | None:intergenic | 25.0% |
| !!! | AAATTCATGTGTTTGATTTG+AGG | - | tig0021673:107061-107080 | Msa1393430:intron | 25.0% |
| !!! | TTTTAACATTGATTAGCTTG+TGG | - | tig0021673:107226-107245 | Msa1393430:intron | 25.0% |
| ! | TATTGCCTAAGAATAAGAAA+TGG | - | tig0021673:107413-107432 | Msa1393430:intron | 25.0% |
| ! | TGTAGATTTAATATGATAGG+CGG | - | tig0021673:107890-107909 | Msa1393430:intron | 25.0% |
| ! | AAAAGAAGGGAAAATGTATT+TGG | + | tig0021673:107932-107951 | None:intergenic | 25.0% |
| !! | TACATTTTCCCTTCTTTTAT+TGG | - | tig0021673:107934-107953 | Msa1393430:intron | 25.0% |
| !! | TTTTGCTACCAATAAAAGAA+GGG | + | tig0021673:107945-107964 | None:intergenic | 25.0% |
| ! | AAAAGACAGGAATATGTATT+TGG | + | tig0021673:108024-108043 | None:intergenic | 25.0% |
| !! | CTTTTGATACTAAAAAAGAC+AGG | + | tig0021673:108037-108056 | None:intergenic | 25.0% |
| ! | ATCTGCAAATAAAGAAATAC+GGG | + | tig0021673:108254-108273 | None:intergenic | 25.0% |
| !!! | GTTTCTTTTGAAAATCTGAT+TGG | - | tig0021673:108392-108411 | Msa1393430:intron | 25.0% |
| !!! | ATTCAGTATTGATTTCAACT+TGG | - | tig0021673:108858-108877 | Msa1393430:intron | 25.0% |
| ! | ATTTGATTGTAGGATACTAA+CGG | - | tig0021673:108895-108914 | Msa1393430:intron | 25.0% |
| !!! | CAACTGTAGGTTTTTTATTT+AGG | + | tig0021673:108997-109016 | None:intergenic | 25.0% |
| ! | CATAAATAGTCAAATGCATT+AGG | + | tig0021673:109089-109108 | None:intergenic | 25.0% |
| ! | ACAAGATATTCAACTGATAT+AGG | - | tig0021673:109229-109248 | Msa1393430:intron | 25.0% |
| ! | ATTCAACTGATATAGGTATT+CGG | - | tig0021673:109236-109255 | Msa1393430:intron | 25.0% |
| ! | TAAATACATTCGCTTTCAAA+GGG | + | tig0021673:109514-109533 | None:intergenic | 25.0% |
| ! | ATAAATACATTCGCTTTCAA+AGG | + | tig0021673:109515-109534 | None:intergenic | 25.0% |
| ! | TTTATTGTTGAAGTTGTTTG+TGG | - | tig0021673:109561-109580 | Msa1393430:intron | 25.0% |
| !!! | TCTAATAATGATAATGGTAC+AGG | - | tig0021673:109622-109641 | Msa1393430:CDS | 25.0% |
| ! | ATGTATTTATGCTAGGTTAT+TGG | - | tig0021673:109921-109940 | Msa1393430:CDS | 25.0% |
| ! | TGTATTTATGCTAGGTTATT+GGG | - | tig0021673:109922-109941 | Msa1393430:CDS | 25.0% |
| ! | ATCCAGAATATGATTAAAGA+AGG | - | tig0021673:110068-110087 | Msa1393430:intron | 25.0% |
| ! | TTCCTTCTTTAATCATATTC+TGG | + | tig0021673:110073-110092 | None:intergenic | 25.0% |
| ! | TCAAAATATAGGACAAATGT+TGG | + | tig0021673:110339-110358 | None:intergenic | 25.0% |
| ! | ATGTATTGCATAATAGTGTA+GGG | + | tig0021673:110416-110435 | None:intergenic | 25.0% |
| ! | TATGTATTGCATAATAGTGT+AGG | + | tig0021673:110417-110436 | None:intergenic | 25.0% |
| !!! | TATTAAGCACTGAAAACATA+AGG | + | tig0021673:110461-110480 | None:intergenic | 25.0% |
| ! | ATACTGGATATCAATGATAA+AGG | - | tig0021673:110478-110497 | Msa1393430:intron | 25.0% |
| ! | TACTGGATATCAATGATAAA+GGG | - | tig0021673:110479-110498 | Msa1393430:intron | 25.0% |
| ! | GCATCATAATAATTAATCAC+AGG | + | tig0021673:110569-110588 | None:intergenic | 25.0% |
| !!! | TGATTTACCTTCTCATTTTT+TGG | + | tig0021673:110753-110772 | None:intergenic | 25.0% |
| ! | CCAAATATAAAACTAATTGC+CGG | - | tig0021673:111232-111251 | Msa1393430:intron | 25.0% |
| !!! | GTTTACTTTTTTAGCATCAA+TGG | - | tig0021673:111468-111487 | Msa1393430:intron | 25.0% |
| ! | CTAGTTAAGATGATTATCAA+AGG | + | tig0021673:111797-111816 | None:intergenic | 25.0% |
| !! | TTGATAATCATCTTAACTAG+TGG | - | tig0021673:111797-111816 | Msa1393430:intron | 25.0% |
| ! | TGATAATCATCTTAACTAGT+GGG | - | tig0021673:111798-111817 | Msa1393430:intron | 25.0% |
| ! | GACAAAAAAATATTACTGAG+TGG | - | tig0021673:111820-111839 | Msa1393430:intron | 25.0% |
| !!! | TACTTTTAGAAGTAGAAATC+TGG | + | tig0021673:111976-111995 | None:intergenic | 25.0% |
| !! | AGTAAAGCATAGATTCTTTT+TGG | - | tig0021673:111992-112011 | Msa1393430:intron | 25.0% |
| !! | GTAAAGCATAGATTCTTTTT+GGG | - | tig0021673:111993-112012 | Msa1393430:intron | 25.0% |
| !! | TAAAGCATAGATTCTTTTTG+GGG | - | tig0021673:111994-112013 | Msa1393430:intron | 25.0% |
| !!! | TCCAATTTGTTACATAAGTT+TGG | - | tig0021673:112187-112206 | Msa1393430:intron | 25.0% |
| ! | ACCAAACTTATGTAACAAAT+TGG | + | tig0021673:112191-112210 | None:intergenic | 25.0% |
| !!! | TTATTTTACAAACCTAGTAG+TGG | + | tig0021673:112257-112276 | None:intergenic | 25.0% |
| ! | TTTATTATCTAGTGATGTGA+TGG | - | tig0021673:112300-112319 | Msa1393430:intron | 25.0% |
| ! | GTACCAAAAAGCTTATTATA+TGG | - | tig0021673:112356-112375 | Msa1393430:intron | 25.0% |
| !!! | AACACATTGTTTTTGTTAGA+AGG | - | tig0021673:112669-112688 | Msa1393430:intron | 25.0% |
| ! | AAAGTTAGAAGCAAATGAAT+AGG | - | tig0021673:112851-112870 | Msa1393430:intron | 25.0% |
| ! | TAATGTGACCTGAAAAAAAA+TGG | + | tig0021673:113181-113200 | None:intergenic | 25.0% |
| ! | ATATCTAGCAACAAAATATG+AGG | + | tig0021673:113225-113244 | None:intergenic | 25.0% |
| !! | TTGTTTGAGTTATTTAAGCA+CGG | - | tig0021673:113330-113349 | Msa1393430:five_prime_UTR | 25.0% |
| !! | TAGTAACGGCTTTAATTTTC+GGG | + | tig0021673:106589-106608 | None:intergenic | 30.0% |
| !!! | GAAAGTTCGGTTTTTTTAGT+CGG | + | tig0021673:106678-106697 | None:intergenic | 30.0% |
| ! | GAGAAATTGTTGTTATGGTT+AGG | + | tig0021673:106730-106749 | None:intergenic | 30.0% |
| CATAACAGAGAAAAAAAGCA+TGG | + | tig0021673:106878-106897 | None:intergenic | 30.0% | |
| !! | TTTTCAACATTGATTAGGAG+TGG | - | tig0021673:107003-107022 | Msa1393430:intron | 30.0% |
| !! | TTTTCACATTGATTAGGTAG+TGG | - | tig0021673:107118-107137 | Msa1393430:intron | 30.0% |
| AATTTCTCATTCTTCATACG+CGG | + | tig0021673:107196-107215 | None:intergenic | 30.0% | |
| !! | TTTTAACATTGATTAGGGAG+TGG | - | tig0021673:107340-107359 | Msa1393430:intron | 30.0% |
| !!! | GTGATTTTTTGAAATCCACA+TGG | - | tig0021673:107386-107405 | Msa1393430:intron | 30.0% |
| CAGTTCCATTTCTTATTCTT+AGG | + | tig0021673:107421-107440 | None:intergenic | 30.0% | |
| AACTCAGAAATTAACACACA+TGG | + | tig0021673:107648-107667 | None:intergenic | 30.0% | |
| GTAATACCATTAACCAAATC+AGG | + | tig0021673:107720-107739 | None:intergenic | 30.0% | |
| ! | CTTTTGCTACCAATAAAAGA+AGG | + | tig0021673:107946-107965 | None:intergenic | 30.0% |
| ! | AGTGTAGTTGATATTACTCA+TGG | - | tig0021673:108280-108299 | Msa1393430:three_prime_UTR | 30.0% |
| ! | GTGTAGTTGATATTACTCAT+GGG | - | tig0021673:108281-108300 | Msa1393430:three_prime_UTR | 30.0% |
| ! | TTTTGTTGGACATTCTATCA+TGG | + | tig0021673:108646-108665 | None:intergenic | 30.0% |
| ATTGACACAATCTCACTAAT+AGG | + | tig0021673:108765-108784 | None:intergenic | 30.0% | |
| ATTCAAAGGTAAGATGACTA+TGG | + | tig0021673:109050-109069 | None:intergenic | 30.0% | |
| TTTACTAACAGCTCATTCAA+AGG | + | tig0021673:109064-109083 | None:intergenic | 30.0% | |
| AGTAAGATTAAAACAGCTTG+TGG | - | tig0021673:109310-109329 | Msa1393430:intron | 30.0% | |
| GTAAGATTAAAACAGCTTGT+GGG | - | tig0021673:109311-109330 | Msa1393430:intron | 30.0% | |
| !!! | TGTGTGTGTTTTGTTTTGAA+AGG | + | tig0021673:109361-109380 | None:intergenic | 30.0% |
| ATTTCAACTATGGATGCATT+TGG | + | tig0021673:109421-109440 | None:intergenic | 30.0% | |
| TAAGTTAAGTTTGCAATAGC+TGG | + | tig0021673:109449-109468 | None:intergenic | 30.0% | |
| GCTATTGCAAACTTAACTTA+AGG | - | tig0021673:109449-109468 | Msa1393430:CDS | 30.0% | |
| !! | AATAATGATAATGGTACAGG+TGG | - | tig0021673:109625-109644 | Msa1393430:CDS | 30.0% |
| ! | CAAATGTTGTCGAACATTTT+GGG | - | tig0021673:109677-109696 | Msa1393430:intron | 30.0% |
| CTATAAACAATCAGTGAAAC+AGG | + | tig0021673:109802-109821 | None:intergenic | 30.0% | |
| !! | TAGTAAATGGCTAGCTTTAT+AGG | - | tig0021673:109842-109861 | Msa1393430:CDS | 30.0% |
| ! | TCATTGTGCTGTTAAAAATC+AGG | + | tig0021673:110049-110068 | None:intergenic | 30.0% |
| GATGCATTTAGGAAATTAGA+AGG | + | tig0021673:110292-110311 | None:intergenic | 30.0% | |
| CTAATTTCCTAAATGCATCA+TGG | - | tig0021673:110293-110312 | Msa1393430:CDS | 30.0% | |
| ! | ATGTTTTCAGTGCTTAATAC+TGG | - | tig0021673:110462-110481 | Msa1393430:intron | 30.0% |
| ACGACAACATTGAAACAATA+AGG | - | tig0021673:110510-110529 | Msa1393430:intron | 30.0% | |
| ! | GACATTACATTACCTGTTTT+AGG | - | tig0021673:110671-110690 | Msa1393430:intron | 30.0% |
| TTTCAGTCCAAAAAATGAGA+AGG | - | tig0021673:110743-110762 | Msa1393430:intron | 30.0% | |
| ! | GTTTTACAATGCATTATGGA+CGG | - | tig0021673:111050-111069 | Msa1393430:intron | 30.0% |
| ACTGGCATAAACAAATTCAT+TGG | - | tig0021673:111204-111223 | Msa1393430:intron | 30.0% | |
| !!! | CCGGCAATTAGTTTTATATT+TGG | + | tig0021673:111235-111254 | None:intergenic | 30.0% |
| CCAACTGGTATAATTGTATT+CGG | - | tig0021673:111330-111349 | Msa1393430:intron | 30.0% | |
| ACTGTAAGAATTTACAGAAG+CGG | + | tig0021673:111443-111462 | None:intergenic | 30.0% | |
| ! | TTATGACTTGTCTGACAAAT+TGG | - | tig0021673:111509-111528 | Msa1393430:intron | 30.0% |
| CATAGATAAACATCAATTCC+TGG | + | tig0021673:111651-111670 | None:intergenic | 30.0% | |
| CAGGAATTGATGTTTATCTA+TGG | - | tig0021673:111649-111668 | Msa1393430:intron | 30.0% | |
| TGTTTATCTATGGTATTTGC+AGG | - | tig0021673:111659-111678 | Msa1393430:intron | 30.0% | |
| CAACAAAATACAGCAAAATG+CGG | + | tig0021673:111768-111787 | None:intergenic | 30.0% | |
| !! | TTTGCTGTATTTTGTTGTAG+AGG | - | tig0021673:111771-111790 | Msa1393430:intron | 30.0% |
| TGTTAAGTACGAGAGAATTA+TGG | - | tig0021673:111866-111885 | Msa1393430:intron | 30.0% | |
| AGATGATATAAACTTCTACG+CGG | + | tig0021673:111931-111950 | None:intergenic | 30.0% | |
| TATCCAGGCATAAATAAGAA+AGG | + | tig0021673:112024-112043 | None:intergenic | 30.0% | |
| ! | TTTTAGCAAAGCTACATCTT+AGG | - | tig0021673:112556-112575 | Msa1393430:intron | 30.0% |
| TTTAGCAAAGCTACATCTTA+GGG | - | tig0021673:112557-112576 | Msa1393430:intron | 30.0% | |
| ! | TACTCCTTCTAAAAAGTAAG+TGG | - | tig0021673:112616-112635 | Msa1393430:intron | 30.0% |
| ! | ACTCCTTCTAAAAAGTAAGT+GGG | - | tig0021673:112617-112636 | Msa1393430:intron | 30.0% |
| TAGCAAATCCTATATTTGCT+AGG | + | tig0021673:112648-112667 | None:intergenic | 30.0% | |
| TTATAGCAACATACACCTTA+AGG | - | tig0021673:112696-112715 | Msa1393430:intron | 30.0% | |
| TACAATTCATATCAAACTGG+AGG | - | tig0021673:112808-112827 | Msa1393430:intron | 30.0% | |
| TATAAATGAATGAGTCGACA+AGG | + | tig0021673:113300-113319 | None:intergenic | 30.0% | |
| ! | TGTTTGAGTTATTTAAGCAC+GGG | - | tig0021673:113331-113350 | Msa1393430:five_prime_UTR | 30.0% |
| ! | ATCCCAACATTTTCAAATTC+TGG | - | tig0021673:113361-113380 | Msa1393430:five_prime_UTR | 30.0% |
| CTCCAGAATTTGAAAATGTT+GGG | + | tig0021673:113366-113385 | None:intergenic | 30.0% | |
| ACTCCAGAATTTGAAAATGT+TGG | + | tig0021673:113367-113386 | None:intergenic | 30.0% | |
| !! | AGTAACGGCTTTAATTTTCG+GGG | + | tig0021673:106588-106607 | None:intergenic | 35.0% |
| ! | TATGGAGTAATGGAAGGAAA+GGG | + | tig0021673:106626-106645 | None:intergenic | 35.0% |
| ! | ATTTCGTATGGAGTAATGGA+AGG | + | tig0021673:106632-106651 | None:intergenic | 35.0% |
| !!! | TTCGGTTTTTTTAGTCGGTA+GGG | + | tig0021673:106673-106692 | None:intergenic | 35.0% |
| AGATCTAACTGCAAACGAAA+CGG | + | tig0021673:106836-106855 | None:intergenic | 35.0% | |
| !! | ATGTGTTTGATTTGAGGTTG+CGG | - | tig0021673:107067-107086 | Msa1393430:intron | 35.0% |
| CATCGAAGAATGAGAGATTT+AGG | - | tig0021673:107090-107109 | Msa1393430:intron | 35.0% | |
| TAGTGTCTGTGATATTGTTC+TGG | - | tig0021673:107672-107691 | Msa1393430:intron | 35.0% | |
| !!! | TGAAGTTTTGACTCCTGATT+TGG | - | tig0021673:107704-107723 | Msa1393430:intron | 35.0% |
| !! | TTGACTCCTGATTTGGTTAA+TGG | - | tig0021673:107711-107730 | Msa1393430:intron | 35.0% |
| TGTCTGCTTGATCTGTTAAT+TGG | - | tig0021673:107792-107811 | Msa1393430:intron | 35.0% | |
| GATTTAATATGATAGGCGGA+TGG | - | tig0021673:107894-107913 | Msa1393430:intron | 35.0% | |
| ! | TTTATTGGTAGCAAAAGTGC+AGG | - | tig0021673:107949-107968 | Msa1393430:intron | 35.0% |
| ! | TTTGTTCCCTCATTAAGTTG+CGG | - | tig0021673:108108-108127 | Msa1393430:intron | 35.0% |
| TCGCGTAAAATGCTACTATA+CGG | + | tig0021673:108160-108179 | None:intergenic | 35.0% | |
| TGTTATTGAAGCTGCAAACA+AGG | - | tig0021673:108307-108326 | Msa1393430:intron | 35.0% | |
| GAATTATAGAATTTGGGTCC+CGG | - | tig0021673:108451-108470 | Msa1393430:intron | 35.0% | |
| AGTTGAATATCTTGTCGAGA+GGG | + | tig0021673:109224-109243 | None:intergenic | 35.0% | |
| !! | CTAGTTCTATAAGCTCTCAT+GGG | - | tig0021673:109276-109295 | Msa1393430:CDS | 35.0% |
| GCTGGTATACATTTCAACTA+TGG | + | tig0021673:109431-109450 | None:intergenic | 35.0% | |
| ACACAATAGAGACAGACAAA+TGG | + | tig0021673:109542-109561 | None:intergenic | 35.0% | |
| TTCGACAACATTTGCACATT+GGG | + | tig0021673:109671-109690 | None:intergenic | 35.0% | |
| ! | GCAAATGTTGTCGAACATTT+TGG | - | tig0021673:109676-109695 | Msa1393430:intron | 35.0% |
| !! | TTGTCTTTTCTCAAAAGCAC+AGG | + | tig0021673:111265-111284 | None:intergenic | 35.0% |
| !! | CTACTTTTCTTTGTACCAAC+TGG | - | tig0021673:111315-111334 | Msa1393430:intron | 35.0% |
| CCGAATACAATTATACCAGT+TGG | + | tig0021673:111333-111352 | None:intergenic | 35.0% | |
| ATGTTGATACACACAAGTCT+AGG | + | tig0021673:111356-111375 | None:intergenic | 35.0% | |
| ! | ATTTTGTACCTTCCTAGTGT+TGG | + | tig0021673:111380-111399 | None:intergenic | 35.0% |
| TTGGAACTTCCTTAGAATAC+AGG | - | tig0021673:111528-111547 | Msa1393430:intron | 35.0% | |
| TCAATTCCTGGAAAACATTG+CGG | + | tig0021673:111639-111658 | None:intergenic | 35.0% | |
| AGTACGAGAGAATTATGGTT+AGG | - | tig0021673:111871-111890 | Msa1393430:intron | 35.0% | |
| ATAAACTTCTACGCGGAATT+GGG | + | tig0021673:111924-111943 | None:intergenic | 35.0% | |
| TATAAACTTCTACGCGGAAT+TGG | + | tig0021673:111925-111944 | None:intergenic | 35.0% | |
| ! | GAACCTTTCTTATTTATGCC+TGG | - | tig0021673:112018-112037 | Msa1393430:intron | 35.0% |
| TTTCTTTACAAGCCACTACT+AGG | - | tig0021673:112242-112261 | Msa1393430:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | tig0021673:112529-112548 | Msa1393430:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | tig0021673:112535-112554 | None:intergenic | 35.0% | |
| !! | ATAACTTGCTACTCATCTAG+TGG | - | tig0021673:112741-112760 | Msa1393430:intron | 35.0% |
| !! | TAACTTGCTACTCATCTAGT+GGG | - | tig0021673:112742-112761 | Msa1393430:intron | 35.0% |
| !!! | TTTTCAGGTCACATTAGTGT+TGG | - | tig0021673:113185-113204 | Msa1393430:intron | 35.0% |
| GGTGCAACAATAGAATATAG+AGG | + | tig0021673:113279-113298 | None:intergenic | 35.0% | |
| !! | GTAACGGCTTTAATTTTCGG+GGG | + | tig0021673:106587-106606 | None:intergenic | 40.0% |
| ! | GTATGGAGTAATGGAAGGAA+AGG | + | tig0021673:106627-106646 | None:intergenic | 40.0% |
| TTAGTCGGTAGGGGTTAAAT+GGG | + | tig0021673:106663-106682 | None:intergenic | 40.0% | |
| TTTAGTCGGTAGGGGTTAAA+TGG | + | tig0021673:106664-106683 | None:intergenic | 40.0% | |
| !!! | TCGGTTTTTTTAGTCGGTAG+GGG | + | tig0021673:106672-106691 | None:intergenic | 40.0% |
| !!! | GTTCGGTTTTTTTAGTCGGT+AGG | + | tig0021673:106674-106693 | None:intergenic | 40.0% |
| GTTATGGTTAGGATCGTTGA+AGG | + | tig0021673:106719-106738 | None:intergenic | 40.0% | |
| TGTTGCTGTGTTCGATGAAT+TGG | - | tig0021673:106966-106985 | Msa1393430:intron | 40.0% | |
| GTGTTTGATGTTGCTGAGTA+CGG | - | tig0021673:107295-107314 | Msa1393430:intron | 40.0% | |
| CTTAGGCAATATCAACCATG+TGG | + | tig0021673:107404-107423 | None:intergenic | 40.0% | |
| GTTAATGGTATTACCTTGCG+TGG | - | tig0021673:107726-107745 | Msa1393430:intron | 40.0% | |
| CTGCTTGATCTGTTAATTGG+TGG | - | tig0021673:107795-107814 | Msa1393430:intron | 40.0% | |
| CATTTCGTGCTAGCTGAATT+TGG | - | tig0021673:107822-107841 | Msa1393430:intron | 40.0% | |
| ! | AGCTGCAAACAAGGTATTCA+TGG | - | tig0021673:108316-108335 | Msa1393430:intron | 40.0% |
| TGAGCATAGCTCATTTGGAA+GGG | - | tig0021673:108474-108493 | Msa1393430:intron | 40.0% | |
| AAGCATTATCCCACTAATCG+CGG | + | tig0021673:108726-108745 | None:intergenic | 40.0% | |
| GATAATGCTTGGTTGTGTTG+TGG | - | tig0021673:108736-108755 | Msa1393430:intron | 40.0% | |
| CCTAACACAAACACAACTGT+AGG | + | tig0021673:109010-109029 | None:intergenic | 40.0% | |
| CCTACAGTTGTGTTTGTGTT+AGG | - | tig0021673:109007-109026 | Msa1393430:intron | 40.0% | |
| CAGTTGAATATCTTGTCGAG+AGG | + | tig0021673:109225-109244 | None:intergenic | 40.0% | |
| !! | GCTAGTTCTATAAGCTCTCA+TGG | - | tig0021673:109275-109294 | Msa1393430:CDS | 40.0% |
| GTTCGACAACATTTGCACAT+TGG | + | tig0021673:109672-109691 | None:intergenic | 40.0% | |
| ! | ATCAAATCTGGCTCCGAAAA+TGG | - | tig0021673:109739-109758 | Msa1393430:intron | 40.0% |
| ! | TCAAATCTGGCTCCGAAAAT+GGG | - | tig0021673:109740-109759 | Msa1393430:intron | 40.0% |
| CAATCAGTGAAACAGGACTA+CGG | + | tig0021673:109795-109814 | None:intergenic | 40.0% | |
| AGGAAAAATTGTTCCTTCCG+AGG | - | tig0021673:110088-110107 | Msa1393430:intron | 40.0% | |
| TTCCTTCCGAGGTAACAATT+AGG | - | tig0021673:110099-110118 | Msa1393430:intron | 40.0% | |
| CAGAAGCCTAATTGTTACCT+CGG | + | tig0021673:110108-110127 | None:intergenic | 40.0% | |
| GGTAGTACATTTATCTGCTC+AGG | + | tig0021673:110271-110290 | None:intergenic | 40.0% | |
| TGCAAAGCCATGATGCATTT+AGG | + | tig0021673:110303-110322 | None:intergenic | 40.0% | |
| CCTCTGGGCAATCAAAATAT+AGG | + | tig0021673:110350-110369 | None:intergenic | 40.0% | |
| !!! | CCTATATTTTGATTGCCCAG+AGG | - | tig0021673:110347-110366 | Msa1393430:intron | 40.0% |
| ATAGTGTAGGGTCTATTACC+TGG | + | tig0021673:110404-110423 | None:intergenic | 40.0% | |
| ! | GTTGTGTTTCTACCATGTCT+TGG | - | tig0021673:110618-110637 | Msa1393430:intron | 40.0% |
| ACAAGAAACTCACCAAGACA+TGG | + | tig0021673:110633-110652 | None:intergenic | 40.0% | |
| TTGTTTGCCTCATGTGCTAA+AGG | - | tig0021673:110649-110668 | Msa1393430:intron | 40.0% | |
| GTAATGTCCTTTAGCACATG+AGG | + | tig0021673:110659-110678 | None:intergenic | 40.0% | |
| TTGCAGCATCAACCTAAAAC+AGG | + | tig0021673:110686-110705 | None:intergenic | 40.0% | |
| !!! | TGTTTTAGGTTGATGCTGCA+AGG | - | tig0021673:110685-110704 | Msa1393430:intron | 40.0% |
| !! | TGTTGAGGAGGTATTTGAGT+CGG | - | tig0021673:110710-110729 | Msa1393430:intron | 40.0% |
| TGTATCAACATGCCAACACT+AGG | - | tig0021673:111365-111384 | Msa1393430:intron | 40.0% | |
| ! | TTCAAACCGCAATGTTTTCC+AGG | - | tig0021673:111630-111649 | Msa1393430:intron | 40.0% |
| AATATCCAGCACGCAATCAA+GGG | + | tig0021673:111701-111720 | None:intergenic | 40.0% | |
| AAATATCCAGCACGCAATCA+AGG | + | tig0021673:111702-111721 | None:intergenic | 40.0% | |
| TTGCGTGCTGGATATTTAAG+AGG | - | tig0021673:111705-111724 | Msa1393430:exon | 40.0% | |
| ACGAGAGAATTATGGTTAGG+AGG | - | tig0021673:111874-111893 | Msa1393430:intron | 40.0% | |
| AGAGAATTATGGTTAGGAGG+TGG | - | tig0021673:111877-111896 | Msa1393430:intron | 40.0% | |
| TTGAACGTGTCATCTTATCC+AGG | + | tig0021673:112039-112058 | None:intergenic | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | tig0021673:112528-112547 | Msa1393430:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | tig0021673:112536-112555 | None:intergenic | 40.0% | |
| !!! | CCACCCACTTACTTTTTAGA+AGG | + | tig0021673:112623-112642 | None:intergenic | 40.0% |
| ! | CCTTCTAAAAAGTAAGTGGG+TGG | - | tig0021673:112620-112639 | Msa1393430:intron | 40.0% |
| ! | GGAGGTGATGTTGAAACTTT+TGG | - | tig0021673:112826-112845 | Msa1393430:intron | 40.0% |
| AATATAGAGGCAACAACCTC+AGG | + | tig0021673:113266-113285 | None:intergenic | 40.0% | |
| AGGTGGTTGCGTGATAGTAA+CGG | + | tig0021673:106603-106622 | None:intergenic | 45.0% | |
| ! | GAAAGCGCGAAAACGTGAAT+TGG | + | tig0021673:106814-106833 | None:intergenic | 45.0% |
| TTTGATGTTGCTGAGTACGG+AGG | - | tig0021673:107298-107317 | Msa1393430:intron | 45.0% | |
| GTATTACCTTGCGTGGCATT+TGG | - | tig0021673:107733-107752 | Msa1393430:intron | 45.0% | |
| ! | TCCCTCATTAAGTTGCGGTT+TGG | - | tig0021673:108113-108132 | Msa1393430:intron | 45.0% |
| GCCAAACCGCAACTTAATGA+GGG | + | tig0021673:108117-108136 | None:intergenic | 45.0% | |
| TGCCAAACCGCAACTTAATG+AGG | + | tig0021673:108118-108137 | None:intergenic | 45.0% | |
| ! | TGCGGTTTGGCATTAGTGAA+AGG | - | tig0021673:108126-108145 | Msa1393430:intron | 45.0% |
| TCCAAATGAGCTATGCTCAC+CGG | + | tig0021673:108473-108492 | None:intergenic | 45.0% | |
| GTGAGCATAGCTCATTTGGA+AGG | - | tig0021673:108473-108492 | Msa1393430:intron | 45.0% | |
| TTTGCGGTCAAATAGCCTAG+TGG | + | tig0021673:108572-108591 | None:intergenic | 45.0% | |
| GCGATTAGTGGGATAATGCT+TGG | - | tig0021673:108725-108744 | Msa1393430:intron | 45.0% | |
| ! | AGCTCTCATGGGAAGCTTTT+TGG | - | tig0021673:109287-109306 | Msa1393430:CDS | 45.0% |
| !! | TGATAATGGTACAGGTGGTC+CGG | - | tig0021673:109630-109649 | Msa1393430:CDS | 45.0% |
| ! | ATTTGATTTCCGCTCGCAGA+AGG | + | tig0021673:109726-109745 | None:intergenic | 45.0% |
| GGACTACGGATCTATCACTA+AGG | + | tig0021673:109781-109800 | None:intergenic | 45.0% | |
| CAATGCTCAGAAGTTGACGT+TGG | + | tig0021673:109962-109981 | None:intergenic | 45.0% | |
| CAGCTTAAACTCGATGCAGA+TGG | + | tig0021673:109996-110015 | None:intergenic | 45.0% | |
| AGCCTAATTGTTACCTCGGA+AGG | + | tig0021673:110104-110123 | None:intergenic | 45.0% | |
| CAACAAGCAATGCAAGACAG+TGG | - | tig0021673:110128-110147 | Msa1393430:intron | 45.0% | |
| ! | TGATGGTTTTCCTCGCAATG+AGG | - | tig0021673:110169-110188 | Msa1393430:intron | 45.0% |
| TGATTGCCCAGAGGAAGAAA+TGG | - | tig0021673:110356-110375 | Msa1393430:intron | 45.0% | |
| GTCTCTCCATTTCTTCCTCT+GGG | + | tig0021673:110365-110384 | None:intergenic | 45.0% | |
| TGGAGAGACGACTTCTTAGT+AGG | - | tig0021673:110376-110395 | Msa1393430:intron | 45.0% | |
| ACGACTTCTTAGTAGGAACC+AGG | - | tig0021673:110383-110402 | Msa1393430:intron | 45.0% | |
| TGCAAAGGGAAAAGTTCGCA+AGG | - | tig0021673:110586-110605 | Msa1393430:intron | 45.0% | |
| GACTCAAATACCTCCTCAAC+AGG | + | tig0021673:110711-110730 | None:intergenic | 45.0% | |
| TCAACATGCCAACACTAGGA+AGG | - | tig0021673:111369-111388 | Msa1393430:intron | 45.0% | |
| TGTGCTTGGCCTGTATTCTA+AGG | + | tig0021673:111540-111559 | None:intergenic | 45.0% | |
| ! | AAAGAAAGGCACGTGACTGA+TGG | - | tig0021673:112143-112162 | Msa1393430:intron | 45.0% |
| GGGTGGATCCTAGCAAATAT+AGG | - | tig0021673:112637-112656 | Msa1393430:intron | 45.0% | |
| AGTGTGTAAGTGCCCTTTGT+GGG | - | tig0021673:113384-113403 | Msa1393430:five_prime_UTR | 45.0% | |
| GTCCACTACAAACCCACAAA+GGG | + | tig0021673:113399-113418 | None:intergenic | 45.0% | |
| !! | AAAAAAAGAATTATATAATT+TGG | - | tig0021673:108593-108612 | Msa1393430:intron | 5.0% |
| !!! | TTTAAAAAAATATTTTTTGT+TGG | + | tig0021673:108660-108679 | None:intergenic | 5.0% |
| !!! | TTTTAAAGAATTAAATAATA+TGG | - | tig0021673:108673-108692 | Msa1393430:intron | 5.0% |
| !! | ATATATATATATATATATAC+AGG | - | tig0021673:112493-112512 | Msa1393430:intron | 5.0% |
| !! | TATATATATATATATATACA+GGG | - | tig0021673:112494-112513 | Msa1393430:intron | 5.0% |
| ! | GTAATGGAAGGAAAGGGAGG+TGG | + | tig0021673:106620-106639 | None:intergenic | 50.0% |
| ! | GGAGTAATGGAAGGAAAGGG+AGG | + | tig0021673:106623-106642 | None:intergenic | 50.0% |
| TTCTCTCCTCTTTCGCGCAA+AGG | - | tig0021673:106764-106783 | Msa1393430:three_prime_UTR | 50.0% | |
| CTTTCACCAAATGCCACGCA+AGG | + | tig0021673:107742-107761 | None:intergenic | 50.0% | |
| CCAAATGAGCTATGCTCACC+GGG | + | tig0021673:108472-108491 | None:intergenic | 50.0% | |
| GCATTGCAGTATGCAGGTGT+CGG | - | tig0021673:108496-108515 | Msa1393430:intron | 50.0% | |
| CATTGCAGTATGCAGGTGTC+GGG | - | tig0021673:108497-108516 | Msa1393430:intron | 50.0% | |
| ! | ATTGCAGTATGCAGGTGTCG+GGG | - | tig0021673:108498-108517 | Msa1393430:intron | 50.0% |
| AGCTGAATGAGCGAGGAATC+CGG | + | tig0021673:108531-108550 | None:intergenic | 50.0% | |
| CCTCGCTCATTCAGCTTAAG+CGG | - | tig0021673:108535-108554 | Msa1393430:intron | 50.0% | |
| !! | GCGGTGAATTTCTAGCCACT+AGG | - | tig0021673:108554-108573 | Msa1393430:intron | 50.0% |
| GCGGTCAGGTCAGTACTAAT+AGG | + | tig0021673:108707-108726 | None:intergenic | 50.0% | |
| TTATCCCACTAATCGCGGTC+AGG | + | tig0021673:108721-108740 | None:intergenic | 50.0% | |
| ! | GATAATGGTACAGGTGGTCC+GGG | - | tig0021673:109631-109650 | Msa1393430:CDS | 50.0% |
| CTGCGAGCGGAAATCAAATC+TGG | - | tig0021673:109727-109746 | Msa1393430:intron | 50.0% | |
| CTCAGAAGTTGACGTTGGTC+AGG | + | tig0021673:109957-109976 | None:intergenic | 50.0% | |
| CCACTCTCTCAAATGCTGCA+CGG | + | tig0021673:110199-110218 | None:intergenic | 50.0% | |
| ! | TGCATCATGGCTTTGCAGAC+TGG | - | tig0021673:110306-110325 | Msa1393430:CDS | 50.0% |
| CGTCTCTCCATTTCTTCCTC+TGG | + | tig0021673:110366-110385 | None:intergenic | 50.0% | |
| ! | CAAAAGCACAGGTTGTGAGC+CGG | + | tig0021673:111254-111273 | None:intergenic | 50.0% |
| ATGGTTAGGAGGTGGAGCAA+TGG | - | tig0021673:111885-111904 | Msa1393430:intron | 50.0% | |
| TGGTTAGGAGGTGGAGCAAT+GGG | - | tig0021673:111886-111905 | Msa1393430:intron | 50.0% | |
| GAGTGTGTAAGTGCCCTTTG+TGG | - | tig0021673:113383-113402 | Msa1393430:five_prime_UTR | 50.0% | |
| TGCCCTTTGTGGGTTTGTAG+TGG | - | tig0021673:113394-113413 | Msa1393430:five_prime_UTR | 50.0% | |
| GGTCCACTACAAACCCACAA+AGG | + | tig0021673:113400-113419 | None:intergenic | 50.0% | |
| GCGTTACCTTTGCGCGAAAG+AGG | + | tig0021673:106773-106792 | None:intergenic | 55.0% | |
| CCCGGTGAGCATAGCTCATT+TGG | - | tig0021673:108469-108488 | Msa1393430:intron | 55.0% | |
| !! | GGAAGGGCATTGCAGTATGC+AGG | - | tig0021673:108490-108509 | Msa1393430:intron | 55.0% |
| GCTGAATGAGCGAGGAATCC+GGG | + | tig0021673:108530-108549 | None:intergenic | 55.0% | |
| CCGCTTAAGCTGAATGAGCG+AGG | + | tig0021673:108538-108557 | None:intergenic | 55.0% | |
| ACTGACCTGACCGCGATTAG+TGG | - | tig0021673:108713-108732 | Msa1393430:intron | 55.0% | |
| CTGACCTGACCGCGATTAGT+GGG | - | tig0021673:108714-108733 | Msa1393430:intron | 55.0% | |
| ! | TGGGTACCTTTTCCACTGCC+CGG | + | tig0021673:109652-109671 | None:intergenic | 55.0% |
| GGGTTTACTCACCTCAGTGC+TGG | - | tig0021673:109697-109716 | Msa1393430:intron | 55.0% | |
| ! | GCACGGTTTTCCTCATTGCG+AGG | + | tig0021673:110182-110201 | None:intergenic | 55.0% |
| CCGTGCAGCATTTGAGAGAG+TGG | - | tig0021673:110196-110215 | Msa1393430:intron | 55.0% | |
| TGATGCTGCAAGGCCTGTTG+AGG | - | tig0021673:110695-110714 | Msa1393430:intron | 55.0% | |
| TGTTGCCCTTGATTGCGTGC+TGG | - | tig0021673:111693-111712 | Msa1393430:exon | 55.0% | |
| GCAGAAGGTCACCAGCACTG+AGG | + | tig0021673:109711-109730 | None:intergenic | 60.0% | |
| TGCTGGTGACCTTCTGCGAG+CGG | - | tig0021673:109714-109733 | Msa1393430:intron | 60.0% | |
| TGCTGCAAGGCCTGTTGAGG+AGG | - | tig0021673:110698-110717 | Msa1393430:intron | 60.0% | |
| !! | CAGGTGTCGGGGTTCGAACC+CGG | - | tig0021673:108509-108528 | Msa1393430:intron | 65.0% |
| GGTGGTCCGGGCAGTGGAAA+AGG | - | tig0021673:109643-109662 | Msa1393430:CDS | 65.0% | |
| GGTACAGGTGGTCCGGGCAG+TGG | - | tig0021673:109637-109656 | Msa1393430:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021673 | gene | 106540 | 113466 | 106540 | ID=Msa1393430;Name=Msa1393430 |
| tig0021673 | mRNA | 106540 | 113466 | 106540 | ID=Msa1393430-mRNA-1;Parent=Msa1393430;Name=Msa1393430-mRNA-1;_AED=0.03;_eAED=0.03;_QI=273|1|1|1|0.77|0.7|10|312|208 |
| tig0021673 | exon | 106540 | 106814 | 106540 | ID=Msa1393430-mRNA-1:exon:13755;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 108280 | 108325 | 108280 | ID=Msa1393430-mRNA-1:exon:13754;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 109242 | 109313 | 109242 | ID=Msa1393430-mRNA-1:exon:13753;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 109399 | 109506 | 109399 | ID=Msa1393430-mRNA-1:exon:13752;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 109602 | 109682 | 109602 | ID=Msa1393430-mRNA-1:exon:13751;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 109789 | 109945 | 109789 | ID=Msa1393430-mRNA-1:exon:13750;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 110245 | 110362 | 110245 | ID=Msa1393430-mRNA-1:exon:13749;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 110978 | 111029 | 110978 | ID=Msa1393430-mRNA-1:exon:13748;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 111678 | 111734 | 111678 | ID=Msa1393430-mRNA-1:exon:13747;Parent=Msa1393430-mRNA-1 |
| tig0021673 | exon | 113221 | 113466 | 113221 | ID=Msa1393430-mRNA-1:exon:13746;Parent=Msa1393430-mRNA-1 |
| tig0021673 | five_prime_UTR | 113221 | 113466 | 113221 | ID=Msa1393430-mRNA-1:five_prime_utr;Parent=Msa1393430-mRNA-1 |
| tig0021673 | five_prime_UTR | 111708 | 111734 | 111708 | ID=Msa1393430-mRNA-1:five_prime_utr;Parent=Msa1393430-mRNA-1 |
| tig0021673 | CDS | 111678 | 111707 | 111678 | ID=Msa1393430-mRNA-1:cds;Parent=Msa1393430-mRNA-1 |
| tig0021673 | CDS | 110978 | 111029 | 110978 | ID=Msa1393430-mRNA-1:cds;Parent=Msa1393430-mRNA-1 |
| tig0021673 | CDS | 110245 | 110362 | 110245 | ID=Msa1393430-mRNA-1:cds;Parent=Msa1393430-mRNA-1 |
| tig0021673 | CDS | 109789 | 109945 | 109789 | ID=Msa1393430-mRNA-1:cds;Parent=Msa1393430-mRNA-1 |
| tig0021673 | CDS | 109602 | 109682 | 109602 | ID=Msa1393430-mRNA-1:cds;Parent=Msa1393430-mRNA-1 |
| tig0021673 | CDS | 109399 | 109506 | 109399 | ID=Msa1393430-mRNA-1:cds;Parent=Msa1393430-mRNA-1 |
| tig0021673 | CDS | 109242 | 109313 | 109242 | ID=Msa1393430-mRNA-1:cds;Parent=Msa1393430-mRNA-1 |
| tig0021673 | CDS | 108317 | 108325 | 108317 | ID=Msa1393430-mRNA-1:cds;Parent=Msa1393430-mRNA-1 |
| tig0021673 | three_prime_UTR | 108280 | 108316 | 108280 | ID=Msa1393430-mRNA-1:three_prime_utr;Parent=Msa1393430-mRNA-1 |
| tig0021673 | three_prime_UTR | 106540 | 106814 | 106540 | ID=Msa1393430-mRNA-1:three_prime_utr;Parent=Msa1393430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
