AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0430060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430060 MtrunA17_Chr3g0133981 98.017 807 16 0 1 807 1 807 0.0 1627
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430060 AT5G42920.2 56.595 834 321 11 1 809 1 818 0.0 865
Msa0430060 AT5G42920.1 57.022 712 277 9 116 809 1 701 0.0 740
Msa0430060 AT1G45233.2 58.425 457 172 4 32 488 14 452 0.0 534

Find 190 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAAGCTTGAGCATCTTTC+AGG 0.161581 3_2:+81643488 None:intergenic
GAACAAAACAACAGCGAAAA+TGG 0.203576 3_2:-81645240 Msa0430060:exon
TAACTTACCAGTGTCCTTAT+TGG 0.208665 3_2:+81643453 None:intergenic
GCCTGTTAGTGGTGGGTTCT+TGG 0.218520 3_2:-81639923 Msa0430060:CDS
TCATTATCTTAAAGCTATTA+AGG 0.227514 3_2:-81644775 Msa0430060:CDS
GTGAACATCATCTTCCAATT+TGG 0.244867 3_2:+81642172 None:intergenic
GCACACTCCCTTGTGCAAAT+TGG 0.262600 3_2:-81641081 Msa0430060:CDS
TACGTTGCAGCTTCATAATT+TGG 0.262615 3_2:-81644811 Msa0430060:CDS
ACCGAATCCTTTATATCCTT+TGG 0.278208 3_2:+81644681 None:intergenic
TGATCAAACTTAGTCCTCTT+TGG 0.279549 3_2:+81640882 None:intergenic
TCTCTTTCGTGGATGGATTC+TGG 0.284635 3_2:-81640675 Msa0430060:CDS
ACAGCAAAAGAAAATCCTTT+TGG 0.310436 3_2:-81643740 Msa0430060:CDS
CCAATCCATCATTCTCAATA+TGG 0.315483 3_2:+81640422 None:intergenic
CCGATCCTCCTCAATCAAAA+TGG 0.317683 3_2:+81644878 None:intergenic
GACTTGTCAGGAACTTCTTT+CGG 0.323775 3_2:+81643704 None:intergenic
TTTGGAATCTTCTGAGGAAT+TGG 0.324635 3_2:+81645157 None:intergenic
TGCTCGCAGTCAAGCCAATA+AGG 0.325903 3_2:-81643467 Msa0430060:CDS
CTGCAAACATCATGCAAAAC+TGG 0.335266 3_2:-81643764 Msa0430060:CDS
CCCAAGTAGTGGTAGGTTCC+TGG 0.337637 3_2:-81639829 Msa0430060:exon
TTACTTCAATACGGCTTTCC+TGG 0.337870 3_2:-81639568 Msa0430060:three_prime_UTR
AATTTATTCCCCAATGATAC+AGG 0.341767 3_2:-81641900 Msa0430060:CDS
AGTAAATTTCGTGTCTTTCC+AGG 0.345778 3_2:+81639861 None:intergenic
TCAGGCACAAGTTCAATATC+AGG 0.346755 3_2:+81644726 None:intergenic
TGTGATTTACTCACAGCTAT+TGG 0.352560 3_2:-81643560 Msa0430060:CDS
GGGTGATTCTTCATCCGATT+TGG 0.352781 3_2:+81645139 None:intergenic
CCTGTTAGTGGTGGGTTCTT+GGG 0.353815 3_2:-81639922 Msa0430060:CDS
AGCTCGAGCCCTGTATCATT+GGG 0.354935 3_2:+81641891 None:intergenic
TGTCATGGATAGCTCCAAAT+TGG 0.361242 3_2:-81642186 Msa0430060:CDS
TGATAGTTCTGATTTCTTGC+TGG 0.365281 3_2:-81640778 Msa0430060:CDS
GGCACAGGTAGGGCTCTTAT+AGG 0.366498 3_2:+81641047 None:intergenic
CCCAAGAACCCACCACTAAC+AGG 0.369943 3_2:+81639922 None:intergenic
GAACTTCACGTCCTTTCAAA+TGG 0.381979 3_2:-81641700 Msa0430060:CDS
AAGGGGAAGAAGAAAGAAAA+GGG 0.385837 3_2:-81645279 Msa0430060:five_prime_UTR
CCTACAATCTCCAGATCAAT+AGG 0.388992 3_2:+81643514 None:intergenic
TTCCTTCACTTAATAAAGTT+AGG 0.391363 3_2:-81640824 Msa0430060:CDS
TGAAATTAAGCTAGCTTGCT+TGG 0.391939 3_2:+81640857 None:intergenic
TTGACAGATCAAGATCAGTA+TGG 0.393928 3_2:-81640506 Msa0430060:intron
TTGGAATCTTCTGAGGAATT+GGG 0.394799 3_2:+81645158 None:intergenic
AGATCGCGAAGGAGTTGTTT+AGG 0.399266 3_2:+81645038 None:intergenic
GCTCAATTTCGAGCTATATC+AGG 0.400382 3_2:-81644619 Msa0430060:intron
ACGTAATTATGTTCAGTAAC+AGG 0.402014 3_2:+81640057 None:intergenic
AGATAAAGAGGAGCATGTTC+AGG 0.402679 3_2:-81640997 Msa0430060:CDS
GCTGCAGCGACCCTAGTAAT+AGG 0.410657 3_2:-81639611 Msa0430060:three_prime_UTR
AAGAGTGAAGATGTTGTATC+TGG 0.414049 3_2:-81641602 Msa0430060:CDS
TGTCCTGCAAAAGTGTTCCA+TGG 0.414215 3_2:-81641109 Msa0430060:CDS
TACTGAACATAATTACGTAT+TGG 0.421369 3_2:-81640052 Msa0430060:CDS
TCCTTGACTTCTACCCTCCT+TGG 0.421741 3_2:+81642113 None:intergenic
GTCCTCTTTGGAAGTAAAGT+TGG 0.423484 3_2:+81640894 None:intergenic
AAGCTCGAGCCCTGTATCAT+TGG 0.424127 3_2:+81641890 None:intergenic
CACATTTCTTTCATCTGCGT+TGG 0.425225 3_2:+81640617 None:intergenic
GGCTTATGCAAGCCTGTTAG+TGG 0.427169 3_2:-81639934 Msa0430060:CDS
GCCAGGAACCTACCACTACT+TGG 0.432085 3_2:+81639828 None:intergenic
ATTGTATGTGTTGGAGTAGA+AGG 0.432464 3_2:-81641957 Msa0430060:CDS
GGATGCTCCAAAGGATATAA+AGG 0.433541 3_2:-81644688 Msa0430060:CDS
ATAAGAATGAACCTATTACT+AGG 0.433616 3_2:+81639600 None:intergenic
TCCAAAGGATATAAAGGATT+CGG 0.434186 3_2:-81644682 Msa0430060:CDS
TCAGTATGGAATATCCTCTA+AGG 0.435454 3_2:-81640492 Msa0430060:CDS
CGGTGTCACAAAAGGAGAAC+TGG 0.442782 3_2:-81640943 Msa0430060:CDS
GTTGATGTAATTGAAAATTC+CGG 0.444747 3_2:-81640963 Msa0430060:CDS
ATCGGAGATGATTGATTCAA+TGG 0.448522 3_2:+81645088 None:intergenic
TTTCAAATGGGCTCAGCACC+TGG 0.449308 3_2:-81641687 Msa0430060:CDS
CCTATTGATCTGGAGATTGT+AGG 0.450944 3_2:-81643514 Msa0430060:CDS
GAAAATTCCGGTGTCACAAA+AGG 0.454854 3_2:-81640951 Msa0430060:CDS
TCAATGTCCTCACAGAATAT+CGG 0.454873 3_2:+81639776 None:intergenic
CTTTCCAGGAGATCGTCTTC+CGG 0.455333 3_2:+81639875 None:intergenic
CACAAAAGATTCCATGATTG+TGG 0.455385 3_2:-81639529 Msa0430060:three_prime_UTR
AGTAAAATCCACCGGCGCCT+TGG 0.456353 3_2:+81644833 None:intergenic
AAAGGGGAAGAAGAAAGAAA+AGG 0.457798 3_2:-81645280 Msa0430060:five_prime_UTR
TTGTATGCGTAATTCCTAGC+TGG 0.459235 3_2:+81643632 None:intergenic
GACGGAACGCGCCAAGGCGC+CGG 0.461594 3_2:-81644844 Msa0430060:CDS
ACACGAAATTTACTTCCAAC+TGG 0.462020 3_2:-81639852 Msa0430060:CDS
ATGGTCAGAGACGTAGAAAA+AGG 0.466929 3_2:-81642136 Msa0430060:CDS
AACTTCACGTCCTTTCAAAT+GGG 0.468507 3_2:-81641699 Msa0430060:CDS
CTTTGCAGAACCTATTGATC+TGG 0.474661 3_2:-81643524 Msa0430060:CDS
TAAGAATGAACCTATTACTA+GGG 0.474795 3_2:+81639601 None:intergenic
GTCCTGCAAAAGTGTTCCAT+GGG 0.475044 3_2:-81641108 Msa0430060:CDS
TCACTTCATCACTCTTCGTC+AGG 0.476768 3_2:-81644997 Msa0430060:intron
TTCCTCTGAAAGATCTAGCC+AGG 0.481627 3_2:+81639811 None:intergenic
GTAATGAGTTTCGCAGGCTT+AGG 0.488419 3_2:+81642011 None:intergenic
GCCTAGTGAAGTTTCGTCTC+CGG 0.488424 3_2:-81641027 Msa0430060:CDS
CCTTGTGCAAATTGGATGGC+TGG 0.488621 3_2:-81641073 Msa0430060:CDS
TCGACTATTATTTAGATGAC+GGG 0.492059 3_2:-81639999 Msa0430060:CDS
GCTACATCATTGAATTTAGT+CGG 0.496566 3_2:-81639485 Msa0430060:three_prime_UTR
CTCAAGGAGAAAAGCTCAGT+TGG 0.496776 3_2:-81641525 Msa0430060:CDS
CTGGATAGTATGACGGAAGA+TGG 0.496785 3_2:-81640924 Msa0430060:CDS
CCATATTGAGAATGATGGAT+TGG 0.500477 3_2:-81640422 Msa0430060:CDS
CACAAAGTCTCTTTCGTGGA+TGG 0.500633 3_2:-81640682 Msa0430060:CDS
TGTGTTATAAACCACAATCA+TGG 0.501166 3_2:+81639518 None:intergenic
CATCCACGAAAGAGACTTTG+TGG 0.504004 3_2:+81640683 None:intergenic
TTGCATAAGATGTCATTGTC+AGG 0.506215 3_2:+81641921 None:intergenic
ACTCTTTGTTCAAGATGCTA+TGG 0.511192 3_2:-81641738 Msa0430060:CDS
GATGTGAAGGGAGACTTGTC+AGG 0.511452 3_2:+81643692 None:intergenic
GTGCCACAAAGTCTCTTTCG+TGG 0.511476 3_2:-81640686 Msa0430060:CDS
TTAAGAGACTTAAGATGTGA+AGG 0.514586 3_2:+81643679 None:intergenic
TTCCTCAGAAGATTCCAAAT+CGG 0.514850 3_2:-81645153 Msa0430060:CDS
GGAGCATGTTCAGGAATCAA+TGG 0.514864 3_2:-81640988 Msa0430060:CDS
TTCGACTATTATTTAGATGA+CGG 0.514880 3_2:-81640000 Msa0430060:CDS
TGCACTACCTTGGTTGATGT+TGG 0.517644 3_2:-81639955 Msa0430060:CDS
CTCATAATTTGATGCTCAAG+AGG 0.519703 3_2:-81644641 Msa0430060:CDS
GGAAGCAGTGGAGACACCTC+AGG 0.528192 3_2:+81641647 None:intergenic
ATCCGATTTGGAATCTTCTG+AGG 0.529566 3_2:+81645151 None:intergenic
AAATGGGCTCAGCACCTGGC+AGG 0.529594 3_2:-81641683 Msa0430060:CDS
AGATACAACATCTTCACTCT+TGG 0.532554 3_2:+81641604 None:intergenic
GACCTAACTTTATTAAGTGA+AGG 0.533202 3_2:+81640822 None:intergenic
ATCTTCTGAGGAATTGGGAA+AGG 0.534448 3_2:+81645163 None:intergenic
ATCACCGGAAGACGATCTCC+TGG 0.534779 3_2:-81639879 Msa0430060:CDS
GGAACGCGCCAAGGCGCCGG+TGG 0.534919 3_2:-81644841 Msa0430060:CDS
CTACCACTACTTGGGCCAGT+TGG 0.535290 3_2:+81639837 None:intergenic
TTCCAACTTTACTTCCAAAG+AGG 0.536943 3_2:-81640896 Msa0430060:CDS
ACAGCTATTGGCTCAGAAAG+AGG 0.537328 3_2:-81643548 Msa0430060:CDS
TGAATTTAGTCGGACAGCTA+TGG 0.539456 3_2:-81639475 Msa0430060:three_prime_UTR
GGTTTGCAATAGTCTCCAAA+AGG 0.539923 3_2:+81643725 None:intergenic
GCTGCTTCACTGTTATCAGC+GGG 0.541519 3_2:+81641626 None:intergenic
GCCAAGGAGGGTAGAAGTCA+AGG 0.542038 3_2:-81642114 Msa0430060:CDS
TCCTCTTTATCTATGATAGC+CGG 0.543176 3_2:+81641008 None:intergenic
CTGTTATCAGCGGGAAGCAG+TGG 0.544666 3_2:+81641635 None:intergenic
AATGCAGACGGAACGCGCCA+AGG 0.546272 3_2:-81644850 Msa0430060:CDS
TATGCAAGCCTGTTAGTGGT+GGG 0.547975 3_2:-81639930 Msa0430060:CDS
TCCGGCTATCATAGATAAAG+AGG 0.548495 3_2:-81641009 Msa0430060:CDS
AGGGCTCGAGCTTCCACACC+AGG 0.548560 3_2:-81641880 Msa0430060:intron
CTCAGGCATTTCCACTGTCA+TGG 0.550033 3_2:-81642201 Msa0430060:intron
CTTAGCGTAATGAGTTTCGC+AGG 0.550291 3_2:+81642005 None:intergenic
TTATATCCTTTGGAGCATCC+CGG 0.550527 3_2:+81644691 None:intergenic
TTATGCAAGCCTGTTAGTGG+TGG 0.554168 3_2:-81639931 Msa0430060:CDS
GAGTACCATATTGAGAATGA+TGG 0.556346 3_2:-81640427 Msa0430060:CDS
CTTCCAACTGGCCCAAGTAG+TGG 0.557816 3_2:-81639840 Msa0430060:exon
TACGCTAAGGTTTGAGTACG+TGG 0.557983 3_2:-81641991 Msa0430060:CDS
CTCACAGAATATCGGTATTG+TGG 0.558742 3_2:+81639784 None:intergenic
AAGGACAAATTGCACTACCT+TGG 0.559183 3_2:-81639965 Msa0430060:CDS
GGCTGCTTCACTGTTATCAG+CGG 0.559248 3_2:+81641625 None:intergenic
GTCAAGGAGAGCCCTGACCA+AGG 0.564171 3_2:-81642098 Msa0430060:CDS
AAATGTGAATCTAGAAGCCA+AGG 0.564314 3_2:-81640601 Msa0430060:intron
CTGCGAAACTCATTACGCTA+AGG 0.568154 3_2:-81642004 Msa0430060:CDS
AGGTGCTGAGCCCATTTGAA+AGG 0.573624 3_2:+81641689 None:intergenic
TAAATCACATAAAGAGCTGG+TGG 0.575843 3_2:+81643574 None:intergenic
GCAAGAAATCAATTCCTGCC+AGG 0.576163 3_2:+81641669 None:intergenic
AAGTTGAATATTGTATGTGT+TGG 0.576638 3_2:-81641966 Msa0430060:CDS
GAAGACGGTGAGATAGAAGA+AGG 0.577436 3_2:-81645218 Msa0430060:CDS
TGCACGGATTTAAGTATGCT+AGG 0.577573 3_2:-81639687 Msa0430060:three_prime_UTR
AGGAATTGATTTCTTGCCTG+AGG 0.580835 3_2:-81641663 Msa0430060:CDS
GAGTAAATCACATAAAGAGC+TGG 0.582503 3_2:+81643571 None:intergenic
TGAAGTCAAGGAATGATGAC+GGG 0.582715 3_2:+81639741 None:intergenic
AAGGGAGTGTGCAAAGCCCA+TGG 0.583753 3_2:+81641092 None:intergenic
TAAGAGACTTAAGATGTGAA+GGG 0.584117 3_2:+81643680 None:intergenic
TCAAGGAGAGCCCTGACCAA+GGG 0.584919 3_2:-81642097 Msa0430060:CDS
GGAGTAGAAGGATCTAATGA+TGG 0.587145 3_2:-81641945 Msa0430060:CDS
TCTGAGAAATTGCAGTTGCA+CGG 0.590669 3_2:-81639703 Msa0430060:three_prime_UTR
ACTCCCTTGTGCAAATTGGA+TGG 0.592687 3_2:-81641077 Msa0430060:CDS
AGAAGAAGGTTCAATCGCCA+TGG 0.593173 3_2:-81645204 Msa0430060:CDS
GTGAAGTCAAGGAATGATGA+CGG 0.594695 3_2:+81639740 None:intergenic
GAAAGCACTCAAACCTGGTG+TGG 0.596775 3_2:+81641867 None:intergenic
GACGAAACTTCACTAGGCAC+AGG 0.597712 3_2:+81641032 None:intergenic
GACGAAGAGTGATGAAGTGA+AGG 0.597855 3_2:+81645000 None:intergenic
AAACTTCACTAGGCACAGGT+AGG 0.600562 3_2:+81641036 None:intergenic
CAACTGGCCCAAGTAGTGGT+AGG 0.604658 3_2:-81639836 Msa0430060:exon
CCAGCCATCCAATTTGCACA+AGG 0.607211 3_2:+81641073 None:intergenic
TCAATATGGTACTCCCCAGA+AGG 0.607678 3_2:+81640436 None:intergenic
AACTTCACTAGGCACAGGTA+GGG 0.609874 3_2:+81641037 None:intergenic
AATCTCTTACAAAACTTGAG+TGG 0.610169 3_2:-81641139 Msa0430060:CDS
ATGACGGGTTATCATCTGAA+AGG 0.619159 3_2:-81639984 Msa0430060:CDS
TTCTGCAGAGAATTCGCTCA+AGG 0.620044 3_2:-81641541 Msa0430060:CDS
ATTTATTCCCCAATGATACA+GGG 0.620305 3_2:-81641899 Msa0430060:CDS
GTGGATGGATTCTGGTGTGA+AGG 0.621402 3_2:-81640667 Msa0430060:CDS
AGGAGAACTGGATAGTATGA+CGG 0.623615 3_2:-81640931 Msa0430060:CDS
TTGCCTGTACAAAACCAGCT+AGG 0.626584 3_2:-81643646 Msa0430060:CDS
CCAGGAACCTACCACTACTT+GGG 0.627888 3_2:+81639829 None:intergenic
AGCTATGGTAGGATGTAATG+TGG 0.629385 3_2:-81639460 Msa0430060:three_prime_UTR
TTCCTGGCTAGATCTTTCAG+AGG 0.630405 3_2:-81639813 Msa0430060:three_prime_UTR
TTTAGTCGGACAGCTATGGT+AGG 0.634955 3_2:-81639471 Msa0430060:three_prime_UTR
AGTCAAGCCAATAAGGACAC+TGG 0.636523 3_2:-81643460 Msa0430060:intron
GGATCGGGTTAAAATGCAGA+CGG 0.649067 3_2:-81644862 Msa0430060:CDS
GTTCACGATGATGAAGAAGA+TGG 0.649163 3_2:-81642155 Msa0430060:CDS
CTGTCTGTACTCGATTCTGT+TGG 0.651052 3_2:+81641564 None:intergenic
TGCAACGTAGTAAAATCCAC+CGG 0.652794 3_2:+81644825 None:intergenic
TGAACTTCGTGCAATAGAAG+CGG 0.654739 3_2:-81640389 Msa0430060:CDS
CAAGGAGAGCCCTGACCAAG+GGG 0.657687 3_2:-81642096 Msa0430060:CDS
CAGATCAATAGGTTCTGCAA+AGG 0.660500 3_2:+81643525 None:intergenic
ACTTCGTGCAATAGAAGCGG+AGG 0.668958 3_2:-81640386 Msa0430060:intron
TTTGAGTAACGAGATCGCGA+AGG 0.671039 3_2:+81645027 None:intergenic
ACAACAGCGAAAATGGAAGA+CGG 0.671179 3_2:-81645233 Msa0430060:exon
CAGCCATCCAATTTGCACAA+GGG 0.676174 3_2:+81641074 None:intergenic
TTTGGAGCTATCCATGACAG+TGG 0.677285 3_2:+81642190 None:intergenic
TTGAGAATGATGGATTGGAA+TGG 0.679880 3_2:-81640417 Msa0430060:CDS
TAAATAATAGTCGAACAACA+TGG 0.681981 3_2:+81640008 None:intergenic
GCCGGAGACGAAACTTCACT+AGG 0.682325 3_2:+81641026 None:intergenic
GCATAAGCCAACATCAACCA+AGG 0.685956 3_2:+81639948 None:intergenic
GCTCGAGCCCTGTATCATTG+GGG 0.698274 3_2:+81641892 None:intergenic
ACGGATTTAAGTATGCTAGG+AGG 0.706111 3_2:-81639684 Msa0430060:three_prime_UTR
CACAATACCGATATTCTGTG+AGG 0.731721 3_2:-81639783 Msa0430060:three_prime_UTR
AAGGAGAGCCCTGACCAAGG+GGG 0.746053 3_2:-81642095 Msa0430060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAAAATTATGTTTATAT+AGG + chr3_2:81642217-81642236 None:intergenic 10.0%
!!! ATAAATTTTGTAGATAAAAA+GGG + chr3_2:81644163-81644182 None:intergenic 10.0%
!!! AATAAATTTTGTAGATAAAA+AGG + chr3_2:81644164-81644183 None:intergenic 10.0%
!!! TATTTAACTTTTTTTATCTT+TGG + chr3_2:81644517-81644536 None:intergenic 10.0%
!!! TTATTAATTTTACTTCAATA+CGG - chr3_2:81645150-81645169 Msa0430060:CDS 10.0%
!! AAAATATTACCTTGAATATT+TGG - chr3_2:81640153-81640172 Msa0430060:intron 15.0%
!!! CTTTGAAATTTAAATACTAT+GGG + chr3_2:81640500-81640519 None:intergenic 15.0%
!!! TCTTTGAAATTTAAATACTA+TGG + chr3_2:81640501-81640520 None:intergenic 15.0%
!! CCATTTATATAAATATAATC+CGG + chr3_2:81641382-81641401 None:intergenic 15.0%
!! GATTATATTTATATAAATGG+TGG - chr3_2:81641382-81641401 Msa0430060:intron 15.0%
!!! ATCTAATTGTATTTTTTAAC+TGG + chr3_2:81641448-81641467 None:intergenic 15.0%
!!! GTTTTAATTTGTAACATATA+TGG + chr3_2:81641483-81641502 None:intergenic 15.0%
!! TGAATCTATTTAAATTTCAA+GGG + chr3_2:81641696-81641715 None:intergenic 15.0%
!! TTGAAATTTAAATAGATTCA+CGG - chr3_2:81641696-81641715 Msa0430060:CDS 15.0%
!! AAAAATCAATTAATGTTTGA+AGG - chr3_2:81641927-81641946 Msa0430060:CDS 15.0%
!!! TTTTAAGAAAGAAAACAAAA+AGG - chr3_2:81641953-81641972 Msa0430060:CDS 15.0%
!!! TTTTAATAAATATAGACCAT+TGG - chr3_2:81642121-81642140 Msa0430060:CDS 15.0%
!! AAAAATTATGTTTATATAGG+TGG + chr3_2:81642214-81642233 None:intergenic 15.0%
!! TTATCTACAAAATTTATTCA+AGG - chr3_2:81644166-81644185 Msa0430060:intron 15.0%
!! TTAGAAATGAAAACATTAAT+AGG + chr3_2:81644616-81644635 None:intergenic 15.0%
!!! TTTTAGTTGAATTGTGAAAT+TGG + chr3_2:81639770-81639789 None:intergenic 20.0%
!! TCAACTAAAAAATTACAGTT+TGG - chr3_2:81639780-81639799 Msa0430060:three_prime_UTR 20.0%
!!! TGTTTTCTTCTCAATTTTAT+AGG - chr3_2:81639817-81639836 Msa0430060:three_prime_UTR 20.0%
!! TCATTATCTTAAAGCTATTA+AGG - chr3_2:81639952-81639971 Msa0430060:CDS 20.0%
!!! AAGAAATGTGCATTTTATAT+AGG - chr3_2:81640195-81640214 Msa0430060:intron 20.0%
!!! TTTCATAAGTTTTCTAAGAT+AGG + chr3_2:81640364-81640383 None:intergenic 20.0%
!! CCGGATTATATTTATATAAA+TGG - chr3_2:81641379-81641398 Msa0430060:intron 20.0%
!! AAAATAGGTTTAGAGATTTA+AGG + chr3_2:81641585-81641604 None:intergenic 20.0%
!! GTGAATCTATTTAAATTTCA+AGG + chr3_2:81641697-81641716 None:intergenic 20.0%
!!! GTTTTTTTTATCAATGTTGA+TGG - chr3_2:81641988-81642007 Msa0430060:CDS 20.0%
!! TCAGTATTAAGATATTCAAA+TGG + chr3_2:81642426-81642445 None:intergenic 20.0%
!!! TGATTTTATTTTTACTACTC+AGG - chr3_2:81642509-81642528 Msa0430060:intron 20.0%
!!! CATTGATAATGATTTTAAGT+GGG + chr3_2:81642673-81642692 None:intergenic 20.0%
!!! ACATTGATAATGATTTTAAG+TGG + chr3_2:81642674-81642693 None:intergenic 20.0%
!! TTAAAATTTGTGGAATTCTT+TGG - chr3_2:81643543-81643562 Msa0430060:CDS 20.0%
!! AAATTTATTCAAGGATCTAT+TGG - chr3_2:81644175-81644194 Msa0430060:intron 20.0%
!! TCTGTCAAAAAATAAAATCT+AGG + chr3_2:81644209-81644228 None:intergenic 20.0%
!!! TGTTTTCATTTCTAAATTGT+AGG - chr3_2:81644621-81644640 Msa0430060:CDS 20.0%
! TACAAAATGCCAAATATTCA+AGG + chr3_2:81640165-81640184 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+AGG + chr3_2:81640222-81640241 None:intergenic 25.0%
!!! TAAATTTTGAGAGACTGTTT+GGG + chr3_2:81640439-81640458 None:intergenic 25.0%
!!! ATAAATTTTGAGAGACTGTT+TGG + chr3_2:81640440-81640459 None:intergenic 25.0%
! TTTCAAAGAGAATGTGATAT+TGG - chr3_2:81640512-81640531 Msa0430060:intron 25.0%
! ATCAACATATCAAGTAACTT+TGG + chr3_2:81640693-81640712 None:intergenic 25.0%
! TCTAAAAGATGAATGAATGA+AGG + chr3_2:81640844-81640863 None:intergenic 25.0%
! TGCATATAAGAAGAATTGTA+AGG + chr3_2:81640920-81640939 None:intergenic 25.0%
!!! ACGTGAATTTTAACATTCTT+TGG - chr3_2:81641305-81641324 Msa0430060:intron 25.0%
! ATACAATTAGATCAAATCTC+TGG - chr3_2:81641456-81641475 Msa0430060:intron 25.0%
!!! AGATTATGTGTGGAATTTTT+TGG + chr3_2:81641514-81641533 None:intergenic 25.0%
!! TAAACCTATTTTCCATATGT+GGG - chr3_2:81641593-81641612 Msa0430060:CDS 25.0%
! TAAGAAAGAAAACAAAAAGG+AGG - chr3_2:81641956-81641975 Msa0430060:CDS 25.0%
! AAGTTGAATATTGTATGTGT+TGG - chr3_2:81642761-81642780 Msa0430060:intron 25.0%
! ATGGAAGATAAATATTGAGT+TGG + chr3_2:81642936-81642955 None:intergenic 25.0%
! TTCCATTTCTTTCATTTGAA+TGG - chr3_2:81642950-81642969 Msa0430060:intron 25.0%
! TTATGTTGAACATCATGAAA+AGG + chr3_2:81643288-81643307 None:intergenic 25.0%
! TGAAAACATAACCAAAACAA+AGG + chr3_2:81643349-81643368 None:intergenic 25.0%
! CATGCTTAAGTTAAAATTTG+TGG - chr3_2:81643533-81643552 Msa0430060:CDS 25.0%
! GTTGATGTAATTGAAAATTC+CGG - chr3_2:81643764-81643783 Msa0430060:CDS 25.0%
! TTCCTTCACTTAATAAAGTT+AGG - chr3_2:81643903-81643922 Msa0430060:intron 25.0%
! GTCAAAAAATAAAATCTAGG+TGG + chr3_2:81644206-81644225 None:intergenic 25.0%
! ATATGATTTCTTCAAGGAAT+GGG - chr3_2:81644421-81644440 Msa0430060:intron 25.0%
!!! ACATGTTTTTTTGTTCTTGA+TGG - chr3_2:81644456-81644475 Msa0430060:intron 25.0%
!!! CATGTTTTTTTGTTCTTGAT+GGG - chr3_2:81644457-81644476 Msa0430060:intron 25.0%
! TCTTTGGACATTATAGTAAA+GGG + chr3_2:81644501-81644520 None:intergenic 25.0%
! ATCTTTGGACATTATAGTAA+AGG + chr3_2:81644502-81644521 None:intergenic 25.0%
! TACTGAACATAATTACGTAT+TGG - chr3_2:81644675-81644694 Msa0430060:CDS 25.0%
! TAAATAATAGTCGAACAACA+TGG + chr3_2:81644722-81644741 None:intergenic 25.0%
! TTCGACTATTATTTAGATGA+CGG - chr3_2:81644727-81644746 Msa0430060:CDS 25.0%
!!! GTTTTTAAAATGTGAAGTCA+AGG + chr3_2:81645001-81645020 None:intergenic 25.0%
!!! TGACTTCACATTTTAAAAAC+TGG - chr3_2:81645001-81645020 Msa0430060:CDS 25.0%
! TAAGAATGAACCTATTACTA+GGG + chr3_2:81645129-81645148 None:intergenic 25.0%
! ATAAGAATGAACCTATTACT+AGG + chr3_2:81645130-81645149 None:intergenic 25.0%
!! TAAGCTGATTTTTGCTTCAA+AGG - chr3_2:81639429-81639448 Msa0430060:three_prime_UTR 30.0%
!! AAGCTGATTTTTGCTTCAAA+GGG - chr3_2:81639430-81639449 Msa0430060:three_prime_UTR 30.0%
! AGAAGAAAGAAAAGGGTTTT+AGG - chr3_2:81639455-81639474 Msa0430060:three_prime_UTR 30.0%
!!! TTTTTTGATGGAGAGGATAT+CGG + chr3_2:81639660-81639679 None:intergenic 30.0%
!!! AGGTTTAGCTTCTTTTTTGA+TGG + chr3_2:81639672-81639691 None:intergenic 30.0%
!!! AAATCGTTCCATTTTGATTG+AGG - chr3_2:81639841-81639860 Msa0430060:exon 30.0%
TCCAAAGGATATAAAGGATT+CGG - chr3_2:81640045-81640064 Msa0430060:CDS 30.0%
! CATTTTATATAGGTCCTGTT+TGG - chr3_2:81640205-81640224 Msa0430060:intron 30.0%
! GCTTATCAACACAAATCTTT+TGG + chr3_2:81640577-81640596 None:intergenic 30.0%
AAGGATTGTAGGATAAATAC+AGG - chr3_2:81640614-81640633 Msa0430060:CDS 30.0%
AGGATTGTAGGATAAATACA+GGG - chr3_2:81640615-81640634 Msa0430060:CDS 30.0%
CATATCAAGTAACTTTGGAT+TGG + chr3_2:81640688-81640707 None:intergenic 30.0%
! ACAGCAAAAGAAAATCCTTT+TGG - chr3_2:81640987-81641006 Msa0430060:CDS 30.0%
TAAGAGACTTAAGATGTGAA+GGG + chr3_2:81641050-81641069 None:intergenic 30.0%
TTAAGAGACTTAAGATGTGA+AGG + chr3_2:81641051-81641070 None:intergenic 30.0%
!!! GTATTTTTTAACTGGTTCAC+CGG + chr3_2:81641440-81641459 None:intergenic 30.0%
! CTAAACCTATTTTCCATATG+TGG - chr3_2:81641592-81641611 Msa0430060:CDS 30.0%
ACGATGAAGTAATTTGACAA+GGG + chr3_2:81641644-81641663 None:intergenic 30.0%
TAGTGTGACATCAAACATTT+GGG - chr3_2:81641748-81641767 Msa0430060:CDS 30.0%
AACAAAAAGGAGGAATGAAA+AGG - chr3_2:81641966-81641985 Msa0430060:CDS 30.0%
AGAAAGAAAGTGATGAAGAA+AGG - chr3_2:81642051-81642070 Msa0430060:CDS 30.0%
AAACAAATGTATCACTCCAA+AGG - chr3_2:81642248-81642267 Msa0430060:intron 30.0%
! CAAAACAACAAGTTGAAGAA+AGG - chr3_2:81642331-81642350 Msa0430060:intron 30.0%
TTCTATGCAAGTACATTATG+TGG - chr3_2:81642384-81642403 Msa0430060:intron 30.0%
AATTTATTCCCCAATGATAC+AGG - chr3_2:81642827-81642846 Msa0430060:intron 30.0%
ATTTATTCCCCAATGATACA+GGG - chr3_2:81642828-81642847 Msa0430060:intron 30.0%
CACCATTCAAATGAAAGAAA+TGG + chr3_2:81642955-81642974 None:intergenic 30.0%
! GATCAACCTAAGATTTTCTA+TGG - chr3_2:81643323-81643342 Msa0430060:intron 30.0%
!! ATTTTCTATGGCCTTTGTTT+TGG - chr3_2:81643335-81643354 Msa0430060:intron 30.0%
CACTAAAATGATTCAGAACA+GGG + chr3_2:81643407-81643426 None:intergenic 30.0%
ACACTAAAATGATTCAGAAC+AGG + chr3_2:81643408-81643427 None:intergenic 30.0%
TGGATTTATTGCAAATGAAC+TGG + chr3_2:81643464-81643483 None:intergenic 30.0%
ACGATAAGCAAGATAAACTA+GGG + chr3_2:81643503-81643522 None:intergenic 30.0%
AACGATAAGCAAGATAAACT+AGG + chr3_2:81643504-81643523 None:intergenic 30.0%
AATCTCTTACAAAACTTGAG+TGG - chr3_2:81643588-81643607 Msa0430060:CDS 30.0%
GACCTAACTTTATTAAGTGA+AGG + chr3_2:81643908-81643927 None:intergenic 30.0%
CAAAAACTCAATGCAAAAAG+AGG + chr3_2:81644264-81644283 None:intergenic 30.0%
! CTTTTTGCATTGAGTTTTTG+TGG - chr3_2:81644264-81644283 Msa0430060:intron 30.0%
CTTGTGATATGATTTCTTCA+AGG - chr3_2:81644415-81644434 Msa0430060:intron 30.0%
GATATGATTTCTTCAAGGAA+TGG - chr3_2:81644420-81644439 Msa0430060:intron 30.0%
CATTATAGTAAAGGGGAAAA+TGG + chr3_2:81644493-81644512 None:intergenic 30.0%
CTTTGGACATTATAGTAAAG+GGG + chr3_2:81644500-81644519 None:intergenic 30.0%
ACGTAATTATGTTCAGTAAC+AGG + chr3_2:81644673-81644692 None:intergenic 30.0%
TCGACTATTATTTAGATGAC+GGG - chr3_2:81644728-81644747 Msa0430060:CDS 30.0%
TGAAAAACAATACTAGTACC+AGG + chr3_2:81645180-81645199 None:intergenic 30.0%
TGTGTTATAAACCACAATCA+TGG + chr3_2:81645212-81645231 None:intergenic 30.0%
GCTACATCATTGAATTTAGT+CGG - chr3_2:81645242-81645261 Msa0430060:exon 30.0%
!! AGCTGATTTTTGCTTCAAAG+GGG - chr3_2:81639431-81639450 Msa0430060:three_prime_UTR 35.0%
AAAGGGGAAGAAGAAAGAAA+AGG - chr3_2:81639447-81639466 Msa0430060:three_prime_UTR 35.0%
AAGGGGAAGAAGAAAGAAAA+GGG - chr3_2:81639448-81639467 Msa0430060:three_prime_UTR 35.0%
GAACAAAACAACAGCGAAAA+TGG - chr3_2:81639487-81639506 Msa0430060:three_prime_UTR 35.0%
!! TTGTTCGTTTTGTTCTTCCA+TGG + chr3_2:81639543-81639562 None:intergenic 35.0%
! TTGGAATCTTCTGAGGAATT+GGG + chr3_2:81639572-81639591 None:intergenic 35.0%
! TTTGGAATCTTCTGAGGAAT+TGG + chr3_2:81639573-81639592 None:intergenic 35.0%
TTCCTCAGAAGATTCCAAAT+CGG - chr3_2:81639574-81639593 Msa0430060:three_prime_UTR 35.0%
!!! CTGTTTTGAAGCAATTCGTA+GGG + chr3_2:81639611-81639630 None:intergenic 35.0%
!!! ACTGTTTTGAAGCAATTCGT+AGG + chr3_2:81639612-81639631 None:intergenic 35.0%
! ATCGGAGATGATTGATTCAA+TGG + chr3_2:81639642-81639661 None:intergenic 35.0%
!!! TAGCTTCTTTTTTGATGGAG+AGG + chr3_2:81639667-81639686 None:intergenic 35.0%
TGTGAAATTGGATAAACCCT+AGG + chr3_2:81639758-81639777 None:intergenic 35.0%
TACGTTGCAGCTTCATAATT+TGG - chr3_2:81639916-81639935 Msa0430060:CDS 35.0%
ACCGAATCCTTTATATCCTT+TGG + chr3_2:81640049-81640068 None:intergenic 35.0%
CTCATAATTTGATGCTCAAG+AGG - chr3_2:81640086-81640105 Msa0430060:CDS 35.0%
! TCAACACAAATCTTTTGGTG+AGG + chr3_2:81640572-81640591 None:intergenic 35.0%
TTGTGTTAGGAAAGGATTGT+AGG - chr3_2:81640603-81640622 Msa0430060:CDS 35.0%
TTGTAGGATAAATACAGGGT+TGG - chr3_2:81640619-81640638 Msa0430060:CDS 35.0%
!! ACTGAATGTGGTGTTATATC+AGG - chr3_2:81640760-81640779 Msa0430060:CDS 35.0%
!! AATGTGGTGTTATATCAGGT+TGG - chr3_2:81640764-81640783 Msa0430060:CDS 35.0%
TAAATCACATAAAGAGCTGG+TGG + chr3_2:81641156-81641175 None:intergenic 35.0%
GAGTAAATCACATAAAGAGC+TGG + chr3_2:81641159-81641178 None:intergenic 35.0%
TGTGATTTACTCACAGCTAT+TGG - chr3_2:81641167-81641186 Msa0430060:intron 35.0%
TAACTTACCAGTGTCCTTAT+TGG + chr3_2:81641277-81641296 None:intergenic 35.0%
! AGGTTTAGAGATTTAAGGTC+TGG + chr3_2:81641580-81641599 None:intergenic 35.0%
CTTTCCCACATATGGAAAAT+AGG + chr3_2:81641600-81641619 None:intergenic 35.0%
CGATGAAGTAATTTGACAAG+GGG + chr3_2:81641643-81641662 None:intergenic 35.0%
GACGATGAAGTAATTTGACA+AGG + chr3_2:81641645-81641664 None:intergenic 35.0%
CTAGTGTGACATCAAACATT+TGG - chr3_2:81641747-81641766 Msa0430060:CDS 35.0%
AGTGTGACATCAAACATTTG+GGG - chr3_2:81641749-81641768 Msa0430060:CDS 35.0%
AGAAATATGCTTGTCCATGA+TGG + chr3_2:81641846-81641865 None:intergenic 35.0%
AGCATGAATAGGAAACTTCT+TGG - chr3_2:81641881-81641900 Msa0430060:CDS 35.0%
!! TGATGGATTCAATTGCCATT+TGG - chr3_2:81642005-81642024 Msa0430060:CDS 35.0%
TTGCAATCTTGCTAACCAAA+TGG + chr3_2:81642023-81642042 None:intergenic 35.0%
ATTTGGTTAGCAAGATTGCA+AGG - chr3_2:81642022-81642041 Msa0430060:CDS 35.0%
!!! GTGATTTTTTTCTGCTTCAC+CGG - chr3_2:81642156-81642175 Msa0430060:CDS 35.0%
GTTTATATAGGTGGCTTCTA+GGG + chr3_2:81642205-81642224 None:intergenic 35.0%
TGTTTATATAGGTGGCTTCT+AGG + chr3_2:81642206-81642225 None:intergenic 35.0%
AAAGATTGCATACAGAGTGA+AGG + chr3_2:81642366-81642385 None:intergenic 35.0%
GTGAACATCATCTTCCAATT+TGG + chr3_2:81642558-81642577 None:intergenic 35.0%
ATTGTATGTGTTGGAGTAGA+AGG - chr3_2:81642770-81642789 Msa0430060:intron 35.0%
TTGCATAAGATGTCATTGTC+AGG + chr3_2:81642809-81642828 None:intergenic 35.0%
TTTGAGTGCTTTCATGTCAT+GGG - chr3_2:81642870-81642889 Msa0430060:intron 35.0%
ACTCTTTGTTCAAGATGCTA+TGG - chr3_2:81642989-81643008 Msa0430060:intron 35.0%
AACTTCACGTCCTTTCAAAT+GGG - chr3_2:81643028-81643047 Msa0430060:intron 35.0%
AGATACAACATCTTCACTCT+TGG + chr3_2:81643126-81643145 None:intergenic 35.0%
AAGAGTGAAGATGTTGTATC+TGG - chr3_2:81643125-81643144 Msa0430060:intron 35.0%
GAACATCATGAAAAGGTCAT+TGG + chr3_2:81643281-81643300 None:intergenic 35.0%
CAAAGGCCATAGAAAATCTT+AGG + chr3_2:81643332-81643351 None:intergenic 35.0%
TAAAATGATTCAGAACAGGG+AGG + chr3_2:81643404-81643423 None:intergenic 35.0%
ATCTTGCTTATCGTTGTAGT+TGG - chr3_2:81643509-81643528 Msa0430060:CDS 35.0%
TCTTGCTTATCGTTGTAGTT+GGG - chr3_2:81643510-81643529 Msa0430060:CDS 35.0%
AATTTGTGGAATTCTTTGGC+TGG - chr3_2:81643547-81643566 Msa0430060:CDS 35.0%
TCCTCTTTATCTATGATAGC+CGG + chr3_2:81643722-81643741 None:intergenic 35.0%
TTCCAACTTTACTTCCAAAG+AGG - chr3_2:81643831-81643850 Msa0430060:intron 35.0%
TGATCAAACTTAGTCCTCTT+TGG + chr3_2:81643848-81643867 None:intergenic 35.0%
!! TGAAATTAAGCTAGCTTGCT+TGG + chr3_2:81643873-81643892 None:intergenic 35.0%
!!! ATCGCCTTTTTTGAAACTCA+GGG + chr3_2:81643930-81643949 None:intergenic 35.0%
!! TGATAGTTCTGATTTCTTGC+TGG - chr3_2:81643949-81643968 Msa0430060:intron 35.0%
! TGGTTTTTCTGCTAAGAACA+AGG + chr3_2:81644093-81644112 None:intergenic 35.0%
AAATGTGAATCTAGAAGCCA+AGG - chr3_2:81644126-81644145 Msa0430060:intron 35.0%
AAAGGGATGATTCTTTACCT+TGG + chr3_2:81644146-81644165 None:intergenic 35.0%
TTGACAGATCAAGATCAGTA+TGG - chr3_2:81644221-81644240 Msa0430060:intron 35.0%
TCAGTATGGAATATCCTCTA+AGG - chr3_2:81644235-81644254 Msa0430060:intron 35.0%
AAACTCAATGCAAAAAGAGG+AGG + chr3_2:81644261-81644280 None:intergenic 35.0%
GAGTACCATATTGAGAATGA+TGG - chr3_2:81644300-81644319 Msa0430060:intron 35.0%
CCAATCCATCATTCTCAATA+TGG + chr3_2:81644308-81644327 None:intergenic 35.0%
!! CCATATTGAGAATGATGGAT+TGG - chr3_2:81644305-81644324 Msa0430060:intron 35.0%
!! TTGAGAATGATGGATTGGAA+TGG - chr3_2:81644310-81644329 Msa0430060:intron 35.0%
AATGGTTCAAGATGTTACTC+TGG - chr3_2:81644373-81644392 Msa0430060:intron 35.0%
! TGTGATGATGCAGGTATATT+AGG + chr3_2:81644556-81644575 None:intergenic 35.0%
! CATTAATAGGTACTGTGAGT+TGG + chr3_2:81644603-81644622 None:intergenic 35.0%
AGTAAATTTCGTGTCTTTCC+AGG + chr3_2:81644869-81644888 None:intergenic 35.0%
ACACGAAATTTACTTCCAAC+TGG - chr3_2:81644875-81644894 Msa0430060:CDS 35.0%
TCAATGTCCTCACAGAATAT+CGG + chr3_2:81644954-81644973 None:intergenic 35.0%
GCTAGGAGGAATAAAAAAAG+TGG - chr3_2:81645057-81645076 Msa0430060:CDS 35.0%
CACAAAAGATTCCATGATTG+TGG - chr3_2:81645198-81645217 Msa0430060:CDS 35.0%
ACAACAGCGAAAATGGAAGA+CGG - chr3_2:81639494-81639513 Msa0430060:three_prime_UTR 40.0%
! ATCTTCTGAGGAATTGGGAA+AGG + chr3_2:81639567-81639586 None:intergenic 40.0%
!! ATCCGATTTGGAATCTTCTG+AGG + chr3_2:81639579-81639598 None:intergenic 40.0%
!!! TCGTTCCATTTTGATTGAGG+AGG - chr3_2:81639844-81639863 Msa0430060:CDS 40.0%
!!! CCATTTTGATTGAGGAGGAT+CGG - chr3_2:81639849-81639868 Msa0430060:CDS 40.0%
!!! CATTTTGATTGAGGAGGATC+GGG - chr3_2:81639850-81639869 Msa0430060:CDS 40.0%
TGCAACGTAGTAAAATCCAC+CGG + chr3_2:81639905-81639924 None:intergenic 40.0%
TCAGGCACAAGTTCAATATC+AGG + chr3_2:81640004-81640023 None:intergenic 40.0%
! TGCCTGAAGAAGAGTTTTTC+CGG - chr3_2:81640017-81640036 Msa0430060:CDS 40.0%
!! TTATATCCTTTGGAGCATCC+CGG + chr3_2:81640039-81640058 None:intergenic 40.0%
GGATGCTCCAAAGGATATAA+AGG - chr3_2:81640039-81640058 Msa0430060:CDS 40.0%
GCTCAATTTCGAGCTATATC+AGG - chr3_2:81640108-81640127 Msa0430060:intron 40.0%
GAGCTGATGAAAACAGCTTA+TGG + chr3_2:81640415-81640434 None:intergenic 40.0%
GCTTGTTTGAGCTTATATGC+TGG + chr3_2:81640464-81640483 None:intergenic 40.0%
TTAAATACTATGGGCCTGCT+TGG + chr3_2:81640491-81640510 None:intergenic 40.0%
GATAAGCCTGCTATTGTGTT+AGG - chr3_2:81640590-81640609 Msa0430060:intron 40.0%
TCCTTTCCTAACACAATAGC+AGG + chr3_2:81640599-81640618 None:intergenic 40.0%
!! GGTGTTATATCAGGTTGGTT+TGG - chr3_2:81640769-81640788 Msa0430060:CDS 40.0%
!! TGGTTTGGCTTTAAGTATGC+TGG - chr3_2:81640784-81640803 Msa0430060:CDS 40.0%
CTGCAAACATCATGCAAAAC+TGG - chr3_2:81640963-81640982 Msa0430060:CDS 40.0%
GGTTTGCAATAGTCTCCAAA+AGG + chr3_2:81641005-81641024 None:intergenic 40.0%
GACTTGTCAGGAACTTCTTT+CGG + chr3_2:81641026-81641045 None:intergenic 40.0%
!!! ATTCCTAGCTGGTTTTGTAC+AGG + chr3_2:81641087-81641106 None:intergenic 40.0%
TTGTATGCGTAATTCCTAGC+TGG + chr3_2:81641098-81641117 None:intergenic 40.0%
CAGATCAATAGGTTCTGCAA+AGG + chr3_2:81641205-81641224 None:intergenic 40.0%
CTTTGCAGAACCTATTGATC+TGG - chr3_2:81641203-81641222 Msa0430060:intron 40.0%
CCTACAATCTCCAGATCAAT+AGG + chr3_2:81641216-81641235 None:intergenic 40.0%
CCTATTGATCTGGAGATTGT+AGG - chr3_2:81641213-81641232 Msa0430060:intron 40.0%
CAAAAGCTTGAGCATCTTTC+AGG + chr3_2:81641242-81641261 None:intergenic 40.0%
!! AAATGGTGGATTCTAAGCTG+AGG - chr3_2:81641396-81641415 Msa0430060:intron 40.0%
!! AATGGTGGATTCTAAGCTGA+GGG - chr3_2:81641397-81641416 Msa0430060:intron 40.0%
TGTGGGAGTAAGATTATGTG+TGG + chr3_2:81641524-81641543 None:intergenic 40.0%
ATCACGCATATGAGAGATGT+GGG + chr3_2:81641541-81641560 None:intergenic 40.0%
AATCACGCATATGAGAGATG+TGG + chr3_2:81641542-81641561 None:intergenic 40.0%
ATATGCGTGATTGTGTTCGT+AGG - chr3_2:81641550-81641569 Msa0430060:CDS 40.0%
! TTCACGGCATTTTCTTCATG+TGG - chr3_2:81641712-81641731 Msa0430060:CDS 40.0%
! TCACGGCATTTTCTTCATGT+GGG - chr3_2:81641713-81641732 Msa0430060:CDS 40.0%
AAGTCTCTCTCTTTCCATCA+TGG - chr3_2:81641829-81641848 Msa0430060:intron 40.0%
TGGACAAGCATATTTCTTCC+CGG - chr3_2:81641849-81641868 Msa0430060:intron 40.0%
TATTCATGCTTCTCCTCTAC+CGG + chr3_2:81641871-81641890 None:intergenic 40.0%
GAAAGTGATGAAGAAAGGAG+AGG - chr3_2:81642056-81642075 Msa0430060:CDS 40.0%
AAGGAGAGGCAGAATTATTG+TGG - chr3_2:81642070-81642089 Msa0430060:CDS 40.0%
AGGAGAGGCAGAATTATTGT+GGG - chr3_2:81642071-81642090 Msa0430060:CDS 40.0%
!! AGACCATTGGTTCAATCTGA+CGG - chr3_2:81642134-81642153 Msa0430060:CDS 40.0%
TTCAAGAGCTAACAATGTCC+TGG + chr3_2:81642284-81642303 None:intergenic 40.0%
TGTCATGGATAGCTCCAAAT+TGG - chr3_2:81642541-81642560 Msa0430060:intron 40.0%
GTTCACGATGATGAAGAAGA+TGG - chr3_2:81642572-81642591 Msa0430060:intron 40.0%
ATGGTCAGAGACGTAGAAAA+AGG - chr3_2:81642591-81642610 Msa0430060:intron 40.0%
! GACTTTTGAATATACCCCCT+TGG + chr3_2:81642649-81642668 None:intergenic 40.0%
GGAGTAGAAGGATCTAATGA+TGG - chr3_2:81642782-81642801 Msa0430060:intron 40.0%
GTTTGAGTGCTTTCATGTCA+TGG - chr3_2:81642869-81642888 Msa0430060:intron 40.0%
GAACTTCACGTCCTTTCAAA+TGG - chr3_2:81643027-81643046 Msa0430060:intron 40.0%
! AGGAATTGATTTCTTGCCTG+AGG - chr3_2:81643064-81643083 Msa0430060:intron 40.0%
AGGGACTCTTGGAGATATAA+TGG + chr3_2:81643484-81643503 None:intergenic 40.0%
CAAGATAAACTAGGGACTCT+TGG + chr3_2:81643495-81643514 None:intergenic 40.0%
!! AATTCTTTGGCTGGCTTACA+GGG - chr3_2:81643556-81643575 Msa0430060:CDS 40.0%
! ACACTTTTGCAGGACAAAAG+AGG + chr3_2:81643614-81643633 None:intergenic 40.0%
TCCGGCTATCATAGATAAAG+AGG - chr3_2:81643718-81643737 Msa0430060:CDS 40.0%
! AGATAAAGAGGAGCATGTTC+AGG - chr3_2:81643730-81643749 Msa0430060:CDS 40.0%
!! GAAAATTCCGGTGTCACAAA+AGG - chr3_2:81643776-81643795 Msa0430060:CDS 40.0%
AGGAGAACTGGATAGTATGA+CGG - chr3_2:81643796-81643815 Msa0430060:intron 40.0%
! GTCCTCTTTGGAAGTAAAGT+TGG + chr3_2:81643836-81643855 None:intergenic 40.0%
AGGTCCCTGAGTTTCAAAAA+AGG - chr3_2:81643923-81643942 Msa0430060:intron 40.0%
!!! CATCGCCTTTTTTGAAACTC+AGG + chr3_2:81643931-81643950 None:intergenic 40.0%
CACATTTCTTTCATCTGCGT+TGG + chr3_2:81644113-81644132 None:intergenic 40.0%
! AGTTTTTGTGGTAGACCTTC+TGG - chr3_2:81644276-81644295 Msa0430060:intron 40.0%
! GTTTTTGTGGTAGACCTTCT+GGG - chr3_2:81644277-81644296 Msa0430060:intron 40.0%
! TTTTTGTGGTAGACCTTCTG+GGG - chr3_2:81644278-81644297 Msa0430060:intron 40.0%
TGAACTTCGTGCAATAGAAG+CGG - chr3_2:81644338-81644357 Msa0430060:intron 40.0%
! TTTTGTTCTTGATGGGAGTC+TGG - chr3_2:81644464-81644483 Msa0430060:intron 40.0%
! AGCAACATTTGTGATGATGC+AGG + chr3_2:81644565-81644584 None:intergenic 40.0%
! ACTGTGAGTTGGAGAAATCA+AGG + chr3_2:81644592-81644611 None:intergenic 40.0%
!! ATGACGGGTTATCATCTGAA+AGG - chr3_2:81644743-81644762 Msa0430060:CDS 40.0%
AAGGACAAATTGCACTACCT+TGG - chr3_2:81644762-81644781 Msa0430060:CDS 40.0%
! TTCTTGGGCAGATCTTTTAG+AGG - chr3_2:81644820-81644839 Msa0430060:CDS 40.0%
CTCACAGAATATCGGTATTG+TGG + chr3_2:81644946-81644965 None:intergenic 40.0%
CACAATACCGATATTCTGTG+AGG - chr3_2:81644944-81644963 Msa0430060:intron 40.0%
TGAAGTCAAGGAATGATGAC+GGG + chr3_2:81644989-81645008 None:intergenic 40.0%
GTGAAGTCAAGGAATGATGA+CGG + chr3_2:81644990-81645009 None:intergenic 40.0%
TCTGAGAAATTGCAGTTGCA+CGG - chr3_2:81645024-81645043 Msa0430060:CDS 40.0%
TGCACGGATTTAAGTATGCT+AGG - chr3_2:81645040-81645059 Msa0430060:CDS 40.0%
ACGGATTTAAGTATGCTAGG+AGG - chr3_2:81645043-81645062 Msa0430060:CDS 40.0%
! CAACAGTTTTCATCACGGTA+GGG + chr3_2:81645095-81645114 None:intergenic 40.0%
! TCAACAGTTTTCATCACGGT+AGG + chr3_2:81645096-81645115 None:intergenic 40.0%
! CAGCTCAACAGTTTTCATCA+CGG + chr3_2:81645100-81645119 None:intergenic 40.0%
TTACTTCAATACGGCTTTCC+TGG - chr3_2:81645159-81645178 Msa0430060:CDS 40.0%
TGAATTTAGTCGGACAGCTA+TGG - chr3_2:81645252-81645271 Msa0430060:five_prime_UTR 40.0%
AGCTATGGTAGGATGTAATG+TGG - chr3_2:81645267-81645286 Msa0430060:five_prime_UTR 40.0%
GAAGACGGTGAGATAGAAGA+AGG - chr3_2:81639509-81639528 Msa0430060:three_prime_UTR 45.0%
AGAAGAAGGTTCAATCGCCA+TGG - chr3_2:81639523-81639542 Msa0430060:three_prime_UTR 45.0%
GGGTGATTCTTCATCCGATT+TGG + chr3_2:81639591-81639610 None:intergenic 45.0%
AGATCGCGAAGGAGTTGTTT+AGG + chr3_2:81639692-81639711 None:intergenic 45.0%
TTTGAGTAACGAGATCGCGA+AGG + chr3_2:81639703-81639722 None:intergenic 45.0%
GACGAAGAGTGATGAAGTGA+AGG + chr3_2:81639730-81639749 None:intergenic 45.0%
TCACTTCATCACTCTTCGTC+AGG - chr3_2:81639730-81639749 Msa0430060:three_prime_UTR 45.0%
CCGATCCTCCTCAATCAAAA+TGG + chr3_2:81639852-81639871 None:intergenic 45.0%
GGATCGGGTTAAAATGCAGA+CGG - chr3_2:81639865-81639884 Msa0430060:CDS 45.0%
! GCCTGAAGAAGAGTTTTTCC+GGG - chr3_2:81640018-81640037 Msa0430060:CDS 45.0%
TCCCGGAAAAACTCTTCTTC+AGG + chr3_2:81640022-81640041 None:intergenic 45.0%
TCAAACAAGCCAATCCAAGC+AGG - chr3_2:81640474-81640493 Msa0430060:CDS 45.0%
GCCTGCTATTGTGTTAGGAA+AGG - chr3_2:81640595-81640614 Msa0430060:intron 45.0%
CCACATTCAGTTTGATCGAC+AGG + chr3_2:81640751-81640770 None:intergenic 45.0%
CCTGTCGATCAAACTGAATG+TGG - chr3_2:81640748-81640767 Msa0430060:CDS 45.0%
!!! TAGCTGGTTTTGTACAGGCA+AGG + chr3_2:81641082-81641101 None:intergenic 45.0%
TTGCCTGTACAAAACCAGCT+AGG - chr3_2:81641081-81641100 Msa0430060:CDS 45.0%
!! ACAGCTATTGGCTCAGAAAG+AGG - chr3_2:81641179-81641198 Msa0430060:intron 45.0%
AGTCAAGCCAATAAGGACAC+TGG - chr3_2:81641267-81641286 Msa0430060:intron 45.0%
GTCAGAATATACACTGCCAG+CGG + chr3_2:81641358-81641377 None:intergenic 45.0%
GGCAGTGTATATTCTGACAC+CGG - chr3_2:81641360-81641379 Msa0430060:intron 45.0%
GAAGACGACTTTCCCACATA+TGG + chr3_2:81641608-81641627 None:intergenic 45.0%
! CACGGCATTTTCTTCATGTG+GGG - chr3_2:81641714-81641733 Msa0430060:CDS 45.0%
TTCTTCATGTGGGGAACACT+AGG - chr3_2:81641723-81641742 Msa0430060:CDS 45.0%
AGCATATTTCTTCCCGGTAG+AGG - chr3_2:81641855-81641874 Msa0430060:intron 45.0%
ATTCATGCTTCTCCTCTACC+GGG + chr3_2:81641870-81641889 None:intergenic 45.0%
! GGTAGAGGAGAAGCATGAAT+AGG - chr3_2:81641870-81641889 Msa0430060:intron 45.0%
TCACCGTCAGATTGAACCAA+TGG + chr3_2:81642140-81642159 None:intergenic 45.0%
! TTTTTCTGCTTCACCGGTGA+TGG - chr3_2:81642162-81642181 Msa0430060:CDS 45.0%
GGCTCTATTAAGTCCATCAC+CGG + chr3_2:81642178-81642197 None:intergenic 45.0%
!! TCCAAAGGTATTATCCAGCC+AGG - chr3_2:81642263-81642282 Msa0430060:intron 45.0%
TCCTGGCTGGATAATACCTT+TGG + chr3_2:81642267-81642286 None:intergenic 45.0%
! TTTGGAGCTATCCATGACAG+TGG + chr3_2:81642540-81642559 None:intergenic 45.0%
AGAGACGTAGAAAAAGGCCA+AGG - chr3_2:81642597-81642616 Msa0430060:intron 45.0%
ACGTAGAAAAAGGCCAAGGA+GGG - chr3_2:81642601-81642620 Msa0430060:intron 45.0%
TGAATATACCCCCTTGGTCA+GGG + chr3_2:81642643-81642662 None:intergenic 45.0%
TTGAATATACCCCCTTGGTC+AGG + chr3_2:81642644-81642663 None:intergenic 45.0%
GTAATGAGTTTCGCAGGCTT+AGG + chr3_2:81642719-81642738 None:intergenic 45.0%
CTTAGCGTAATGAGTTTCGC+AGG + chr3_2:81642725-81642744 None:intergenic 45.0%
CTGCGAAACTCATTACGCTA+AGG - chr3_2:81642723-81642742 Msa0430060:intron 45.0%
TACGCTAAGGTTTGAGTACG+TGG - chr3_2:81642736-81642755 Msa0430060:intron 45.0%
!! GACATGAAAGCACTCAAACC+TGG + chr3_2:81642868-81642887 None:intergenic 45.0%
GCAAGAAATCAATTCCTGCC+AGG + chr3_2:81643061-81643080 None:intergenic 45.0%
CTGTCTGTACTCGATTCTGT+TGG + chr3_2:81643166-81643185 None:intergenic 45.0%
TTCTGCAGAGAATTCGCTCA+AGG - chr3_2:81643186-81643205 Msa0430060:intron 45.0%
CTCAAGGAGAAAAGCTCAGT+TGG - chr3_2:81643202-81643221 Msa0430060:intron 45.0%
!! GAATTCTTTGGCTGGCTTAC+AGG - chr3_2:81643555-81643574 Msa0430060:CDS 45.0%
!! TGTCCTGCAAAAGTGTTCCA+TGG - chr3_2:81643618-81643637 Msa0430060:CDS 45.0%
!! GTCCTGCAAAAGTGTTCCAT+GGG - chr3_2:81643619-81643638 Msa0430060:CDS 45.0%
ACTCCCTTGTGCAAATTGGA+TGG - chr3_2:81643650-81643669 Msa0430060:CDS 45.0%
CAGCCATCCAATTTGCACAA+GGG + chr3_2:81643656-81643675 None:intergenic 45.0%
AACTTCACTAGGCACAGGTA+GGG + chr3_2:81643693-81643712 None:intergenic 45.0%
AAACTTCACTAGGCACAGGT+AGG + chr3_2:81643694-81643713 None:intergenic 45.0%
GGAGCATGTTCAGGAATCAA+TGG - chr3_2:81643739-81643758 Msa0430060:CDS 45.0%
! CAGTTCTCCTTTTGTGACAC+CGG + chr3_2:81643786-81643805 None:intergenic 45.0%
! CTGGATAGTATGACGGAAGA+TGG - chr3_2:81643803-81643822 Msa0430060:intron 45.0%
CATCCACGAAAGAGACTTTG+TGG + chr3_2:81644047-81644066 None:intergenic 45.0%
CACAAAGTCTCTTTCGTGGA+TGG - chr3_2:81644045-81644064 Msa0430060:intron 45.0%
! TCTCTTTCGTGGATGGATTC+TGG - chr3_2:81644052-81644071 Msa0430060:intron 45.0%
TCAATATGGTACTCCCCAGA+AGG + chr3_2:81644294-81644313 None:intergenic 45.0%
AAGCGGAGGTAAGTACACAA+TGG - chr3_2:81644355-81644374 Msa0430060:intron 45.0%
! TGCACTACCTTGGTTGATGT+TGG - chr3_2:81644772-81644791 Msa0430060:CDS 45.0%
GCATAAGCCAACATCAACCA+AGG + chr3_2:81644782-81644801 None:intergenic 45.0%
TTATGCAAGCCTGTTAGTGG+TGG - chr3_2:81644796-81644815 Msa0430060:CDS 45.0%
TATGCAAGCCTGTTAGTGGT+GGG - chr3_2:81644797-81644816 Msa0430060:CDS 45.0%
!! TGGGCAGATCTTTTAGAGGA+AGG - chr3_2:81644824-81644843 Msa0430060:CDS 45.0%
!! GGGCAGATCTTTTAGAGGAA+GGG - chr3_2:81644825-81644844 Msa0430060:CDS 45.0%
!! CTTTTAGAGGAAGGGATCAC+CGG - chr3_2:81644833-81644852 Msa0430060:CDS 45.0%
TTCCTGGCTAGATCTTTCAG+AGG - chr3_2:81644914-81644933 Msa0430060:intron 45.0%
! TTCCTCTGAAAGATCTAGCC+AGG + chr3_2:81644919-81644938 None:intergenic 45.0%
TTTAGTCGGACAGCTATGGT+AGG - chr3_2:81645256-81645275 Msa0430060:five_prime_UTR 45.0%
TCACTCTTCGTCAGGTACCT+AGG - chr3_2:81639738-81639757 Msa0430060:three_prime_UTR 50.0%
CACTCTTCGTCAGGTACCTA+GGG - chr3_2:81639739-81639758 Msa0430060:three_prime_UTR 50.0%
! GTTTTTCCGGGATGCTCCAA+AGG - chr3_2:81640030-81640049 Msa0430060:CDS 50.0%
TACTATGGGCCTGCTTGGAT+TGG + chr3_2:81640486-81640505 None:intergenic 50.0%
GATGTGAAGGGAGACTTGTC+AGG + chr3_2:81641038-81641057 None:intergenic 50.0%
TGCTCGCAGTCAAGCCAATA+AGG - chr3_2:81641260-81641279 Msa0430060:intron 50.0%
GTTACCAGTTCTATTGCCGC+TGG - chr3_2:81641339-81641358 Msa0430060:intron 50.0%
GGCTCTATTAAATCCCTCGC+CGG - chr3_2:81641418-81641437 Msa0430060:intron 50.0%
! TTTAACTGGTTCACCGGCGA+GGG + chr3_2:81641434-81641453 None:intergenic 50.0%
!! TTTTAACTGGTTCACCGGCG+AGG + chr3_2:81641435-81641454 None:intergenic 50.0%
!! ATAGGTGGCTTCTAGGGTGA+GGG + chr3_2:81642199-81642218 None:intergenic 50.0%
!! TATAGGTGGCTTCTAGGGTG+AGG + chr3_2:81642200-81642219 None:intergenic 50.0%
AGAGCTAACAATGTCCTGGC+TGG + chr3_2:81642280-81642299 None:intergenic 50.0%
CTCAGGCATTTCCACTGTCA+TGG - chr3_2:81642526-81642545 Msa0430060:intron 50.0%
GACGTAGAAAAAGGCCAAGG+AGG - chr3_2:81642600-81642619 Msa0430060:intron 50.0%
TCCTTGACTTCTACCCTCCT+TGG + chr3_2:81642617-81642636 None:intergenic 50.0%
AGCTCGAGCCCTGTATCATT+GGG + chr3_2:81642839-81642858 None:intergenic 50.0%
AAGCTCGAGCCCTGTATCAT+TGG + chr3_2:81642840-81642859 None:intergenic 50.0%
!! GAAAGCACTCAAACCTGGTG+TGG + chr3_2:81642863-81642882 None:intergenic 50.0%
!! AGGTGCTGAGCCCATTTGAA+AGG + chr3_2:81643041-81643060 None:intergenic 50.0%
! TTTCAAATGGGCTCAGCACC+TGG - chr3_2:81643040-81643059 Msa0430060:intron 50.0%
GCTGCTTCACTGTTATCAGC+GGG + chr3_2:81643104-81643123 None:intergenic 50.0%
GGCTGCTTCACTGTTATCAG+CGG + chr3_2:81643105-81643124 None:intergenic 50.0%
! GTTGGCTCTTCTGTGAGTCA+CGG - chr3_2:81643220-81643239 Msa0430060:intron 50.0%
! AGCCCATGGAACACTTTTGC+AGG + chr3_2:81643624-81643643 None:intergenic 50.0%
GCACACTCCCTTGTGCAAAT+TGG - chr3_2:81643646-81643665 Msa0430060:CDS 50.0%
CCAGCCATCCAATTTGCACA+AGG + chr3_2:81643657-81643676 None:intergenic 50.0%
CCTTGTGCAAATTGGATGGC+TGG - chr3_2:81643654-81643673 Msa0430060:CDS 50.0%
GACGAAACTTCACTAGGCAC+AGG + chr3_2:81643698-81643717 None:intergenic 50.0%
GCCTAGTGAAGTTTCGTCTC+CGG - chr3_2:81643700-81643719 Msa0430060:CDS 50.0%
!! CGGTGTCACAAAAGGAGAAC+TGG - chr3_2:81643784-81643803 Msa0430060:intron 50.0%
GTGCCACAAAGTCTCTTTCG+TGG - chr3_2:81644041-81644060 Msa0430060:intron 50.0%
! GTGGATGGATTCTGGTGTGA+AGG - chr3_2:81644060-81644079 Msa0430060:intron 50.0%
GCAAAAAGAGGAGGCCTTAG+AGG + chr3_2:81644252-81644271 None:intergenic 50.0%
ACTTCGTGCAATAGAAGCGG+AGG - chr3_2:81644341-81644360 Msa0430060:intron 50.0%
GGCTTATGCAAGCCTGTTAG+TGG - chr3_2:81644793-81644812 Msa0430060:CDS 50.0%
!! CCTGTTAGTGGTGGGTTCTT+GGG - chr3_2:81644805-81644824 Msa0430060:CDS 50.0%
CTTTCCAGGAGATCGTCTTC+CGG + chr3_2:81644855-81644874 None:intergenic 50.0%
CCAGGAACCTACCACTACTT+GGG + chr3_2:81644901-81644920 None:intergenic 50.0%
AGTAAAATCCACCGGCGCCT+TGG + chr3_2:81639897-81639916 None:intergenic 55.0%
ACTGCCAGCGGCAATAGAAC+TGG + chr3_2:81641346-81641365 None:intergenic 55.0%
GCCAAGGAGGGTAGAAGTCA+AGG - chr3_2:81642613-81642632 Msa0430060:intron 55.0%
TCAAGGAGAGCCCTGACCAA+GGG - chr3_2:81642630-81642649 Msa0430060:intron 55.0%
GCTCGAGCCCTGTATCATTG+GGG + chr3_2:81642838-81642857 None:intergenic 55.0%
CTGTTATCAGCGGGAAGCAG+TGG + chr3_2:81643095-81643114 None:intergenic 55.0%
! AAGGGAGTGTGCAAAGCCCA+TGG + chr3_2:81643638-81643657 None:intergenic 55.0%
GGCACAGGTAGGGCTCTTAT+AGG + chr3_2:81643683-81643702 None:intergenic 55.0%
GCCGGAGACGAAACTTCACT+AGG + chr3_2:81643704-81643723 None:intergenic 55.0%
!! GCCTGTTAGTGGTGGGTTCT+TGG - chr3_2:81644804-81644823 Msa0430060:CDS 55.0%
CCCAAGAACCCACCACTAAC+AGG + chr3_2:81644808-81644827 None:intergenic 55.0%
ATCACCGGAAGACGATCTCC+TGG - chr3_2:81644848-81644867 Msa0430060:CDS 55.0%
CTTCCAACTGGCCCAAGTAG+TGG - chr3_2:81644887-81644906 Msa0430060:CDS 55.0%
CTACCACTACTTGGGCCAGT+TGG + chr3_2:81644893-81644912 None:intergenic 55.0%
CAACTGGCCCAAGTAGTGGT+AGG - chr3_2:81644891-81644910 Msa0430060:CDS 55.0%
CCCAAGTAGTGGTAGGTTCC+TGG - chr3_2:81644898-81644917 Msa0430060:intron 55.0%
GCCAGGAACCTACCACTACT+TGG + chr3_2:81644902-81644921 None:intergenic 55.0%
GCTGCAGCGACCCTAGTAAT+AGG - chr3_2:81645116-81645135 Msa0430060:CDS 55.0%
AATGCAGACGGAACGCGCCA+AGG - chr3_2:81639877-81639896 Msa0430060:CDS 60.0%
GTCAAGGAGAGCCCTGACCA+AGG - chr3_2:81642629-81642648 Msa0430060:intron 60.0%
CAAGGAGAGCCCTGACCAAG+GGG - chr3_2:81642631-81642650 Msa0430060:intron 60.0%
AAGGAGAGCCCTGACCAAGG+GGG - chr3_2:81642632-81642651 Msa0430060:intron 60.0%
! AAATGGGCTCAGCACCTGGC+AGG - chr3_2:81643044-81643063 Msa0430060:intron 60.0%
GGAAGCAGTGGAGACACCTC+AGG + chr3_2:81643083-81643102 None:intergenic 60.0%
AGGGCTCGAGCTTCCACACC+AGG - chr3_2:81642847-81642866 Msa0430060:intron 65.0%
GACGGAACGCGCCAAGGCGC+CGG - chr3_2:81639883-81639902 Msa0430060:CDS 75.0%
!!! GGAACGCGCCAAGGCGCCGG+TGG - chr3_2:81639886-81639905 Msa0430060:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 81639408 81645341 81639408 ID=Msa0430060;Name=Msa0430060
chr3_2 mRNA 81639408 81645341 81639408 ID=Msa0430060-mRNA-1;Parent=Msa0430060;Name=Msa0430060-mRNA-1;_AED=0.09;_eAED=0.09;_QI=98|1|1|1|1|1|8|435|810
chr3_2 exon 81639408 81640106 81639408 ID=Msa0430060-mRNA-1:exon:22584;Parent=Msa0430060-mRNA-1
chr3_2 exon 81640387 81640521 81640387 ID=Msa0430060-mRNA-1:exon:22583;Parent=Msa0430060-mRNA-1
chr3_2 exon 81640602 81641172 81640602 ID=Msa0430060-mRNA-1:exon:22582;Parent=Msa0430060-mRNA-1
chr3_2 exon 81641518 81641768 81641518 ID=Msa0430060-mRNA-1:exon:22581;Parent=Msa0430060-mRNA-1
chr3_2 exon 81641881 81642218 81641881 ID=Msa0430060-mRNA-1:exon:22580;Parent=Msa0430060-mRNA-1
chr3_2 exon 81643461 81643797 81643461 ID=Msa0430060-mRNA-1:exon:22579;Parent=Msa0430060-mRNA-1
chr3_2 exon 81644620 81644910 81644620 ID=Msa0430060-mRNA-1:exon:22578;Parent=Msa0430060-mRNA-1
chr3_2 exon 81644998 81645341 81644998 ID=Msa0430060-mRNA-1:exon:22577;Parent=Msa0430060-mRNA-1
chr3_2 five_prime_UTR 81645244 81645341 81645244 ID=Msa0430060-mRNA-1:five_prime_utr;Parent=Msa0430060-mRNA-1
chr3_2 CDS 81644998 81645243 81644998 ID=Msa0430060-mRNA-1:cds;Parent=Msa0430060-mRNA-1
chr3_2 CDS 81644620 81644910 81644620 ID=Msa0430060-mRNA-1:cds;Parent=Msa0430060-mRNA-1
chr3_2 CDS 81643461 81643797 81643461 ID=Msa0430060-mRNA-1:cds;Parent=Msa0430060-mRNA-1
chr3_2 CDS 81641881 81642218 81641881 ID=Msa0430060-mRNA-1:cds;Parent=Msa0430060-mRNA-1
chr3_2 CDS 81641518 81641768 81641518 ID=Msa0430060-mRNA-1:cds;Parent=Msa0430060-mRNA-1
chr3_2 CDS 81640602 81641172 81640602 ID=Msa0430060-mRNA-1:cds;Parent=Msa0430060-mRNA-1
chr3_2 CDS 81640387 81640521 81640387 ID=Msa0430060-mRNA-1:cds;Parent=Msa0430060-mRNA-1
chr3_2 CDS 81639843 81640106 81639843 ID=Msa0430060-mRNA-1:cds;Parent=Msa0430060-mRNA-1
chr3_2 three_prime_UTR 81639408 81639842 81639408 ID=Msa0430060-mRNA-1:three_prime_utr;Parent=Msa0430060-mRNA-1
Gene Sequence

>Msa0430060

ATGGAAGACGGTGAGATAGAAGAAGGTTCAATCGCCATGGAAGAACAAAACGAACAAGCCTTTCCCAATTCCTCAGAAGATTCCAAATCGGATGAAGAATCACCCTACGAATTGCTTCAAAACAGTAAATCTTCCATTGAATCAATCATCTCCGATATCCTCTCCATCAAAAAAGAAGCTAAACCTAAACAACTCCTTCGCGATCTCGTTACTCAAATGTTCCTTCACTTCATCACTCTTCGTCAGGCAAATCGTTCCATTTTGATTGAGGAGGATCGGGTTAAAATGCAGACGGAACGCGCCAAGGCGCCGGTGGATTTTACTACGTTGCAGCTTCATAATTTGGTGTATGAGAAGAGTCATTATCTTAAAGCTATTAAGGCTTGTAAAGATTTTAAATCGAAGTATCCTGATATTGAACTTGTGCCTGAAGAAGAGTTTTTCCGGGATGCTCCAAAGGATATAAAGGATTCGGTTTTGTCTAAAGATAGTGCTCATAATTTGATGCTCAAGAGGCTCAATTTCGAGCTATATCAGCGTAAAGAGCTCTGCAAACATCATGCAAAACTGGAACAGCAAAAGAAAATCCTTTTGGAGACTATTGCAAACCGAAAGAAGTTCCTGACAAGTCTCCCTTCACATCTTAAGTCTCTTAAGAAAGCATCCTTGCCTGTACAAAACCAGCTAGGAATTACGCATACAAAGAAACTAAAGCAGCATCATTCAGCAGAGTTGCTTCCACCAGCTCTTTATGTGATTTACTCACAGCTATTGGCTCAGAAAGAGGCCTTTGCAGAACCTATTGATCTGGAGATTGTAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGCAGTCAAGCCAATAAGGACACTGGCATTTCCACTGTCATGGATAGCTCCAAATTGGAAGATGATGTTCACGATGATGAAGAAGATGGTCAGAGACGTAGAAAAAGGCCAAGGAGGGTAGAAGTCAAGGAGAGCCCTGACCAAGGGGGTATATTCAAAAGTCACCCACTTAAAATCATTATCAATGTGTATGAAGATGAGTCTTCTGATCCTAAGCCTGCGAAACTCATTACGCTAAGGTTTGAGTACGTGGTGAAGTTGAATATTGTATGTGTTGGAGTAGAAGGATCTAATGATGGTCCTGACAATGACATCTTATGCAATTTATTCCCCAATGATACAGGGCTCGAGCTTCCACACCAGTCAGCTAAACTCTTTGTTCAAGATGCTATGGCGTTCAATACTCAGAGAACTTCACGTCCTTTCAAATGGGCTCAGCACCTGGCAGGAATTGATTTCTTGCCTGAGGTGTCTCCACTGCTTCCCGCTGATAACAGTGAAGCAGCCAAGAGTGAAGATGTTGTATCTGGTCTCACATTATATCGCCAACAGAATCGAGTACAGACAGTTCTGCAGAGAATTCGCTCAAGGAGAAAAGCTCAGTTGGCTCTTCTGGAACAGCTAGAATCTCTTACAAAACTTGAGTGGCCTCTTTTGTCCTGCAAAAGTGTTCCATGGGCTTTGCACACTCCCTTGTGCAAATTGGATGGCTGGTCACCTATAAGAGCCCTACCTGTGCCTAGTGAAGTTTCGTCTCCGGCTATCATAGATAAAGAGGAGCATGTTCAGGAATCAATGGATGTTGATGTAATTGAAAATTCCGGTGTCACAAAAGGAGAACTGGATAGTATGACGGAAGATGGCGAGCTTCCAACTTTACTTCCAAAGAGGACTAAGTTTGATCATTCCAAGCAAGCTAGCTTAATTTCAAAAAGCATCATTCCTTCACTTAATAAAGTTAGGTCCCTGAGTTTCAAAAAAGGCGATGATAGTTCTGATTTCTTGCTGGATACTGATAGTGATTTTGATGATACTGCACAAATAGAAAGTGAACATGAACATAGCGTATCTGATTACTGTGCCACAAAGTCTCTTTCGTGGATGGATTCTGGTGTGAAGGAATTTTTCCTTGTTCTTAGCAGAAAAACCAACGCAGATGAAAGAAATGTGAATCTAGAAGCCAAGATCAAGATCAGTATGGAATATCCTCTAAGGCCTCCTCTTTTTGCATTGAGTTTTTGTGGTAGACCTTCTGGGGAGTACCATATTGAGAATGATGGATTGGAATGGTACAATGAACTTCGTGCAATAGAAGCGGAGGTCAATTTACACATGCTAAAGACACTACCTGTTACTGAACATAATTACGTATTGGCTCATCAAGTGAGTTGTCTTGCCATGTTGTTCGACTATTATTTAGATGACGGGTTATCATCTGAAAGGACAAATTGCACTACCTTGGTTGATGTTGGCTTATGCAAGCCTGTTAGTGGTGGGTTCTTGGGCAGATCTTTTAGAGGAAGGGATCACCGGAAGACGATCTCCTGGAAAGACACGAAATTTACTTCCAACTGGCCCAAGTAG
Protein sequence

>Msa0430060

MEDGEIEEGSIAMEEQNEQAFPNSSEDSKSDEESPYELLQNSKSSIESIISDILSIKKEAKPKQLLRDLVTQMFLHFITLRQANRSILIEEDRVKMQTERAKAPVDFTTLQLHNLVYEKSHYLKAIKACKDFKSKYPDIELVPEEEFFRDAPKDIKDSVLSKDSAHNLMLKRLNFELYQRKELCKHHAKLEQQKKILLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGITHTKKLKQHHSAELLPPALYVIYSQLLAQKEAFAEPIDLEIVGSLKDAQAFARSQANKDTGISTVMDSSKLEDDVHDDEEDGQRRRKRPRRVEVKESPDQGGIFKSHPLKIIINVYEDESSDPKPAKLITLRFEYVVKLNIVCVGVEGSNDGPDNDILCNLFPNDTGLELPHQSAKLFVQDAMAFNTQRTSRPFKWAQHLAGIDFLPEVSPLLPADNSEAAKSEDVVSGLTLYRQQNRVQTVLQRIRSRRKAQLALLEQLESLTKLEWPLLSCKSVPWALHTPLCKLDGWSPIRALPVPSEVSSPAIIDKEEHVQESMDVDVIENSGVTKGELDSMTEDGELPTLLPKRTKFDHSKQASLISKSIIPSLNKVRSLSFKKGDDSSDFLLDTDSDFDDTAQIESEHEHSVSDYCATKSLSWMDSGVKEFFLVLSRKTNADERNVNLEAKIKISMEYPLRPPLFALSFCGRPSGEYHIENDGLEWYNELRAIEAEVNLHMLKTLPVTEHNYVLAHQVSCLAMLFDYYLDDGLSSERTNCTTLVDVGLCKPVSGGFLGRSFRGRDHRKTISWKDTKFTSNWPK*