AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1132480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132480 MtrunA17_Chr8g0381831 96.699 818 26 1 1 817 25 842 0.0 1644
Msa1132480 MtrunA17_Chr3g0123801 66.794 783 222 9 1 767 1 761 0.0 1055
Msa1132480 MtrunA17_Chr3g0102711 30.876 217 118 6 166 378 296 484 3.80e-18 89.4
Msa1132480 MtrunA17_Chr5g0446691 33.728 169 86 7 185 351 340 484 9.68e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132480 AT2G22400.1 60.396 808 276 14 8 788 11 801 0.0 971
Msa1132480 AT4G40000.1 57.016 791 294 10 1 773 1 763 0.0 874
Msa1132480 AT4G40000.2 55.035 576 216 9 216 773 1 551 0.0 607
Msa1132480 AT4G26600.1 29.730 296 157 12 166 445 327 587 4.34e-17 86.3
Msa1132480 AT4G26600.3 29.730 296 157 12 166 445 327 587 5.03e-17 86.3
Msa1132480 AT5G55920.1 30.244 205 111 6 161 359 339 517 2.51e-16 84.0
Msa1132480 AT4G26600.8 31.313 198 108 4 166 359 327 500 3.69e-16 82.8
Msa1132480 AT4G26600.7 29.954 217 120 5 166 378 327 515 3.91e-16 82.8
Msa1132480 AT3G13180.1 31.361 169 90 4 185 351 334 478 5.16e-13 72.8

Find 200 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCAGGATGCCGTTTAAA+AGG 0.190650 7_3:+85349869 Msa1132480:CDS
TAAAAGAAAGCTACAATATC+AGG 0.193012 7_3:+85352873 Msa1132480:CDS
TTTACTTTCTGCAGGAATTC+AGG 0.226926 7_3:+85350078 Msa1132480:intron
TTCCGTTCTTGCAGCTATTC+TGG 0.233522 7_3:+85352630 Msa1132480:intron
GCTCTTCACCATGTGCTTTC+CGG 0.245863 7_3:+85353859 Msa1132480:CDS
CTTCATGATTAGTAACAATT+AGG 0.246866 7_3:-85349838 None:intergenic
TGGTTGTTGCGTGGTTATTA+TGG 0.247821 7_3:+85354040 Msa1132480:CDS
TGCAGGGTTCACATAAATTT+AGG 0.248022 7_3:-85354522 None:intergenic
TTAAAGCTAGAAAATGAAAT+TGG 0.254499 7_3:+85348952 Msa1132480:CDS
GGCACAGAAAATGGCTCTTC+TGG 0.261873 7_3:+85354295 Msa1132480:CDS
CTTTCCAGTATGTTTCCTTC+TGG 0.278031 7_3:+85352225 Msa1132480:CDS
TCCTTCTGGCAAATGCTATC+AGG 0.284071 7_3:+85352239 Msa1132480:CDS
CATCATTTAGAATCAATTCT+AGG 0.285604 7_3:+85347469 Msa1132480:CDS
GGTTTATCTTTACTCAAAAT+CGG 0.300019 7_3:+85351037 Msa1132480:intron
AAAGTCTTGCAAGCAATTCT+TGG 0.304314 7_3:-85354261 None:intergenic
ACGGAACTTGGGAACATCTT+TGG 0.305209 7_3:-85352190 None:intergenic
TTCCGTTCTTCACGTGTTAG+AGG 0.306424 7_3:-85352793 None:intergenic
ATAGGTTCCTCCCCTATTCT+TGG 0.312286 7_3:+85349368 Msa1132480:intron
TGCATCCCATACAGATGATT+TGG 0.318756 7_3:+85352762 Msa1132480:CDS
TGGTTATGTATGGAAGAATA+AGG 0.325256 7_3:-85353902 None:intergenic
GATGCAGTTGTGGCGCGTTT+TGG 0.332809 7_3:-85347188 None:intergenic
TCCTCTACCCATGGTTGCTC+TGG 0.337907 7_3:-85347217 None:intergenic
ATACGTCTAGGCACAGAAAA+TGG 0.356138 7_3:+85354286 Msa1132480:CDS
TACCATTTCCGCCACATATC+AGG 0.360042 7_3:-85349995 None:intergenic
GGTTGTTGCGTGGTTATTAT+GGG 0.360528 7_3:+85354041 Msa1132480:CDS
GTCAAAACAGAGAAAACGTT+TGG 0.362743 7_3:+85347268 Msa1132480:CDS
CGGCCTTTGCCCTGGTATCC+CGG 0.363804 7_3:+85347766 Msa1132480:CDS
GTACTTAGAACCAGGGAGTC+AGG 0.375840 7_3:-85354563 None:intergenic
GTTTATCTTTACTCAAAATC+GGG 0.381887 7_3:+85351038 Msa1132480:CDS
CTGAATGCACATCCAAGAAT+AGG 0.383509 7_3:-85349380 None:intergenic
AATCACACTTCTACGGAACT+TGG 0.388539 7_3:-85352202 None:intergenic
TATCTTCCAAATCATCTGTA+TGG 0.390960 7_3:-85352768 None:intergenic
TGAATGCACATCCAAGAATA+GGG 0.393782 7_3:-85349379 None:intergenic
GCTTACTGTCAAGTACAAAA+TGG 0.398024 7_3:-85349404 None:intergenic
AACACAGCAGAGAAGGTTCC+AGG 0.405306 7_3:+85352850 Msa1132480:CDS
AGCAAAGTTCCCGGGATACC+AGG 0.408224 7_3:-85347776 None:intergenic
AGCTACAATATCAGGGCAAA+TGG 0.412664 7_3:+85352881 Msa1132480:CDS
TTACTTTCTGCAGGAATTCA+GGG 0.413804 7_3:+85350079 Msa1132480:intron
GTCGGCCAGGTCTCAAGAAA+TGG 0.414879 7_3:+85351488 Msa1132480:CDS
CACCTGATATGTGGCGGAAA+TGG 0.415761 7_3:+85349993 Msa1132480:CDS
AAGACAGGAAGCTGTTAGTA+TGG 0.418992 7_3:+85348984 Msa1132480:CDS
TATTGTTGCGTTGAACTTCT+CGG 0.421626 7_3:+85353071 Msa1132480:CDS
CAATCGGATGCTGGAGGGGT+AGG 0.425361 7_3:+85354203 Msa1132480:CDS
TTCACCTCCAACATAGTTAG+AGG 0.427601 7_3:-85354332 None:intergenic
ATAATTTGCTTGGTTATGTA+TGG 0.434010 7_3:-85353912 None:intergenic
GCATAGCAATTAAAACTTGT+AGG 0.441578 7_3:-85350122 None:intergenic
GGTTATGTATGGAAGAATAA+GGG 0.441749 7_3:-85353901 None:intergenic
TGAATGCCAAGCAAAGTTCC+CGG 0.442297 7_3:-85347785 None:intergenic
ATTCTCAAACTACTACTCAT+TGG 0.443034 7_3:+85347334 Msa1132480:CDS
GGTGTATAGTCTCGAGCAAT+TGG 0.445281 7_3:-85349564 None:intergenic
TTGTTGACTCGTCAACTTTG+AGG 0.446066 7_3:-85354177 None:intergenic
TCGGAGGATAAGGAAGGGTC+TGG 0.446587 7_3:-85347309 None:intergenic
AATTGTTGATCCACAAGAAT+GGG 0.449501 7_3:+85347410 Msa1132480:CDS
GGCAAATGCTATCAGGATCT+TGG 0.450132 7_3:+85352246 Msa1132480:CDS
GGTATCCCGGGAACTTTGCT+TGG 0.450478 7_3:+85347779 Msa1132480:CDS
TGTTGACTCGTCAACTTTGA+GGG 0.452988 7_3:-85354176 None:intergenic
AAAAGGGAATTATGAAAGAA+TGG 0.453153 7_3:+85349886 Msa1132480:CDS
TGATGATATTCGTTCCCAAT+TGG 0.458564 7_3:+85347593 Msa1132480:CDS
GATAAGGAAGGGTCTGGATC+TGG 0.459026 7_3:-85347303 None:intergenic
GCACAGAAAATGGCTCTTCT+GGG 0.461885 7_3:+85354296 Msa1132480:CDS
TCCTCAAGACTCTGTTTGCT+AGG 0.463373 7_3:-85352658 None:intergenic
GGACTTCAAGCGTCTTCTGC+AGG 0.467959 7_3:+85353950 Msa1132480:CDS
TGCGTGGTTATTATGGGTAA+AGG 0.468510 7_3:+85354047 Msa1132480:CDS
GCAATCCTTCGGATGATATC+CGG 0.470647 7_3:-85353878 None:intergenic
GATGCTGGAGGGGTAGGGCG+AGG 0.471870 7_3:+85354209 Msa1132480:CDS
TTCCTTTGATTCTTATTACA+AGG 0.477035 7_3:+85347380 Msa1132480:CDS
AGGTGAAGCACAGGCTGTAC+AGG 0.479774 7_3:+85354348 Msa1132480:CDS
GGCCTTTGCCCTGGTATCCC+GGG 0.479981 7_3:+85347767 Msa1132480:CDS
TCCCAGGATGCCGTTTAAAA+GGG 0.480126 7_3:+85349870 Msa1132480:CDS
ATGATTAGTAACAATTAGGT+TGG 0.480820 7_3:-85349834 None:intergenic
GAGGTGAGACAGAGGCGATT+CGG 0.481360 7_3:+85347746 Msa1132480:CDS
CATAACCAAGCAAATTATAC+AGG 0.483742 7_3:+85353917 Msa1132480:CDS
TAGGGCGAGGTTGTCCGTGA+TGG 0.485207 7_3:+85354222 Msa1132480:CDS
TAATTGTTGATCCACAAGAA+TGG 0.487617 7_3:+85347409 Msa1132480:CDS
AGATGCCTGTATAATTTGCT+TGG 0.489845 7_3:-85353922 None:intergenic
TTTGCCAGAAGGAAACATAC+TGG 0.491351 7_3:-85352229 None:intergenic
AATCGGATGCTGGAGGGGTA+GGG 0.491437 7_3:+85354204 Msa1132480:CDS
CAGAAGACGCTTGAAGTCCT+CGG 0.494208 7_3:-85353946 None:intergenic
ACCTTCCATTTCTTGAGACC+TGG 0.495511 7_3:-85351493 None:intergenic
ATGATGCAGGCAATGGTGTT+CGG 0.497996 7_3:-85347452 None:intergenic
ACTGTCTCAGTAACTAATGC+AGG 0.498553 7_3:-85354539 None:intergenic
AAGAATAAGGGGCAATCCTT+CGG 0.498704 7_3:-85353889 None:intergenic
TTGCAGCACAGCAATGAAGA+AGG 0.499587 7_3:-85352445 None:intergenic
CAACAATAGCAATCGGATGC+TGG 0.499828 7_3:+85354194 Msa1132480:CDS
GACAATTCCTCTAACTATGT+TGG 0.501847 7_3:+85354325 Msa1132480:CDS
GTAACAAGGTGACCATCAAA+TGG 0.503653 7_3:-85352988 None:intergenic
AGAAAATGGCTCTTCTGGGC+AGG 0.504580 7_3:+85354300 Msa1132480:CDS
AAGGCAGCAAACTTATTGCC+TGG 0.507560 7_3:+85354020 Msa1132480:CDS
AGGAATTCAGGGATGGGACA+AGG 0.507941 7_3:+85350090 Msa1132480:intron
AACAATATCCTTGACTGACT+TGG 0.510238 7_3:-85353055 None:intergenic
AGGCGATTCGGCCTTTGCCC+TGG 0.513851 7_3:+85347758 Msa1132480:CDS
GTCCGTGATGGTCTCTGCAA+TGG 0.514638 7_3:+85354234 Msa1132480:CDS
AGGATCACTGCCTGATGGAA+TGG 0.519136 7_3:+85349600 Msa1132480:CDS
GACGAGTCAACAATAGCAAT+CGG 0.521462 7_3:+85354187 Msa1132480:CDS
TGAGACAGTCCCTGACTCCC+TGG 0.523646 7_3:+85354553 Msa1132480:three_prime_UTR
AGAAGACGCTTGAAGTCCTC+GGG 0.525989 7_3:-85353945 None:intergenic
ATGACACAAACCATTCCATC+AGG 0.526171 7_3:-85349610 None:intergenic
AACCTCGTCGTTAGTTTCGA+AGG 0.529695 7_3:+85354736 Msa1132480:three_prime_UTR
GAGTATGAGTACTAATACAA+AGG 0.530080 7_3:-85354587 None:intergenic
TCAGCAGACTCCTCCATCAC+AGG 0.530698 7_3:-85352357 None:intergenic
ACCAGAGCAACCATGGGTAG+AGG 0.533404 7_3:+85347216 Msa1132480:exon
GGTTATTTGTAGGTTGCTGA+AGG 0.535471 7_3:+85347724 Msa1132480:intron
GTTGCGTTGAACTTCTCGGT+TGG 0.536011 7_3:+85353075 Msa1132480:CDS
TGATGCCGAGTTTGGTGAAA+AGG 0.538887 7_3:+85354001 Msa1132480:CDS
CAACTGAAAATGACCTCGGT+TGG 0.539529 7_3:+85353102 Msa1132480:CDS
TTCCTTGTAATAAGAATCAA+AGG 0.539742 7_3:-85347382 None:intergenic
CGTGCATTCACTTCGCGCTG+AGG 0.542110 7_3:+85347626 Msa1132480:CDS
ATCTTCCAAATCATCTGTAT+GGG 0.545899 7_3:-85352767 None:intergenic
CCACAACTTATTCGTCGGCC+AGG 0.547313 7_3:+85351475 Msa1132480:CDS
TTGTAATAAGAATCAAAGGA+AGG 0.549320 7_3:-85347378 None:intergenic
TGGAAAGAATCACACTTCTA+CGG 0.550513 7_3:-85352209 None:intergenic
AGTAACAATTAGGTTGGCTG+TGG 0.551773 7_3:-85349828 None:intergenic
ATCACACTTCTACGGAACTT+GGG 0.552405 7_3:-85352201 None:intergenic
TCCTGATAGCATTTGCCAGA+AGG 0.552899 7_3:-85352240 None:intergenic
TCGTGACCTTCCTCTACCCA+TGG 0.553571 7_3:-85347226 None:intergenic
TTTATCTTTACTCAAAATCG+GGG 0.553832 7_3:+85351039 Msa1132480:CDS
TACTTAGAACCAGGGAGTCA+GGG 0.554184 7_3:-85354562 None:intergenic
TGTAATAAGAATCAAAGGAA+GGG 0.556130 7_3:-85347377 None:intergenic
AAATGGCTCTTCTGGGCAGG+TGG 0.556454 7_3:+85354303 Msa1132480:CDS
ATACACCAATCCACAAAAGC+AGG 0.557146 7_3:+85349580 Msa1132480:CDS
TGCACAAAACACAGCAGAGA+AGG 0.560171 7_3:+85352843 Msa1132480:CDS
AGCTTCCACAACTTATTCGT+CGG 0.560441 7_3:+85351470 Msa1132480:CDS
TCATCAAACCAGAGCAACCA+TGG 0.560896 7_3:+85347209 Msa1132480:exon
CTGTGCGATGTCCCGTGTAG+TGG 0.563031 7_3:+85349950 Msa1132480:CDS
AATTGGAAATATCACAAGAC+AGG 0.565338 7_3:+85348969 Msa1132480:CDS
CTATGTTGGAGGTGAAGCAC+AGG 0.566402 7_3:+85354339 Msa1132480:CDS
ATCCTCATGCAATGCTCTAG+AGG 0.566410 7_3:-85352396 None:intergenic
GAATGCCAAGCAAAGTTCCC+GGG 0.567018 7_3:-85347784 None:intergenic
TTCTGCAGGAATTCAGGGAT+GGG 0.568230 7_3:+85350084 Msa1132480:intron
TTCCCGGGATACCAGGGCAA+AGG 0.568734 7_3:-85347769 None:intergenic
CATGAAGCACAACATTTCCC+AGG 0.569181 7_3:+85349854 Msa1132480:CDS
TTTCTGCAGGAATTCAGGGA+TGG 0.570795 7_3:+85350083 Msa1132480:intron
AAAGCTGCTGTGAGTTAGAG+AGG 0.571057 7_3:+85354400 Msa1132480:exon
ATGAATTGATCCCATTCTTG+TGG 0.571295 7_3:-85347420 None:intergenic
GTTATGTATGGAAGAATAAG+GGG 0.573543 7_3:-85353900 None:intergenic
ACAAAGGAGTACTTAGAACC+AGG 0.576389 7_3:-85354571 None:intergenic
GAATTGATTCTAAATGATGC+AGG 0.577108 7_3:-85347465 None:intergenic
AAGGTCACGAACTCAAAGAA+AGG 0.577671 7_3:+85347239 Msa1132480:CDS
TTCGTAAGGCACCTGATATG+TGG 0.580986 7_3:+85349984 Msa1132480:CDS
AAAAGAAAGCTACAATATCA+GGG 0.582226 7_3:+85352874 Msa1132480:CDS
ATAGCAATCGGATGCTGGAG+GGG 0.584256 7_3:+85354199 Msa1132480:CDS
CTGGTTTGATGATGCAGTTG+TGG 0.584330 7_3:-85347198 None:intergenic
TGCTGAAGGAGGTGAGACAG+AGG 0.584654 7_3:+85347738 Msa1132480:CDS
TATCAATGTTTCGTGTAACA+AGG 0.585607 7_3:-85353002 None:intergenic
AATAGCAATCGGATGCTGGA+GGG 0.585812 7_3:+85354198 Msa1132480:CDS
GGAATTCAGGGATGGGACAA+GGG 0.587424 7_3:+85350091 Msa1132480:intron
AATTCCTCTAACTATGTTGG+AGG 0.587774 7_3:+85354328 Msa1132480:CDS
GTCCTCTAACACGTGAAGAA+CGG 0.593200 7_3:+85352791 Msa1132480:CDS
TGGAGATGGTACACTTCGTA+AGG 0.594241 7_3:+85349970 Msa1132480:CDS
TATTTGTAGGTTGCTGAAGG+AGG 0.594800 7_3:+85347727 Msa1132480:intron
GAACACGATCAAATAACAGT+TGG 0.595675 7_3:-85349928 None:intergenic
GCAAAGTTCCCGGGATACCA+GGG 0.600427 7_3:-85347775 None:intergenic
CTATGTCTCCAAGTCAGTCA+AGG 0.602696 7_3:+85353047 Msa1132480:CDS
GAAAGACAAACAGCACGAGA+AGG 0.602807 7_3:+85353834 Msa1132480:CDS
CTTATTGCCTGGTTGTTGCG+TGG 0.607662 7_3:+85354031 Msa1132480:CDS
AAAGCAGGATCACTGCCTGA+TGG 0.612819 7_3:+85349595 Msa1132480:CDS
CAATAGCAATCGGATGCTGG+AGG 0.613159 7_3:+85354197 Msa1132480:CDS
CCTGGCCGACGAATAAGTTG+TGG 0.613657 7_3:-85351475 None:intergenic
AGACAAACAGCACGAGAAGG+TGG 0.614134 7_3:+85353837 Msa1132480:CDS
GCTCCAGTGTTCTGATCATG+AGG 0.618002 7_3:-85352423 None:intergenic
GCTTAGGAAGAATCAAACAT+TGG 0.618665 7_3:+85347825 Msa1132480:CDS
TCCTATTGAAAATGAAGCTG+TGG 0.620217 7_3:+85351093 Msa1132480:CDS
ATGCCTCATGATCAGAACAC+TGG 0.621782 7_3:+85352420 Msa1132480:CDS
GATGTCCCGTGTAGTGGAGA+TGG 0.622673 7_3:+85349956 Msa1132480:CDS
GGAAGATGACATTACTAGTG+TGG 0.624217 7_3:+85352293 Msa1132480:CDS
AGGTATATGACAAGAGCAGT+TGG 0.624400 7_3:+85352157 Msa1132480:intron
ACTAGAGAATCCTGTGATGG+AGG 0.624811 7_3:+85352347 Msa1132480:CDS
CAAAGGAGTACTTAGAACCA+GGG 0.627661 7_3:-85354570 None:intergenic
GATGATATCCGGAAAGCACA+TGG 0.628461 7_3:-85353867 None:intergenic
GAGCAACCATGGGTAGAGGA+AGG 0.629891 7_3:+85347220 Msa1132480:exon
CAATATCAGGGCAAATGGAG+AGG 0.631567 7_3:+85352886 Msa1132480:CDS
ATAATAACCACGCAACAACC+AGG 0.639292 7_3:-85354038 None:intergenic
ATTCTAAATGATGCAGGCAA+TGG 0.639368 7_3:-85347459 None:intergenic
CATATGAGACTACCTGGCAG+AGG 0.641063 7_3:-85352477 None:intergenic
TTCCTCTAGAGCATTGCATG+AGG 0.643867 7_3:+85352394 Msa1132480:CDS
GAATGCACATCCAAGAATAG+GGG 0.644846 7_3:-85349378 None:intergenic
CTGTCTCAGTAACTAATGCA+GGG 0.645066 7_3:-85354538 None:intergenic
CATCAAACCAGAGCAACCAT+GGG 0.648138 7_3:+85347210 Msa1132480:exon
ACGTGAAGAACGGAATTCTG+AGG 0.648938 7_3:+85352801 Msa1132480:CDS
GCCAGGTCTCAAGAAATGGA+AGG 0.649652 7_3:+85351492 Msa1132480:CDS
TAGTAATTGTAATGTTGACA+TGG 0.651091 7_3:+85352272 Msa1132480:CDS
TGCACATCCAAGAATAGGGG+AGG 0.651957 7_3:-85349375 None:intergenic
AGCACTAGAGAATCCTGTGA+TGG 0.653225 7_3:+85352344 Msa1132480:CDS
AAGCTGCTGTGAGTTAGAGA+GGG 0.654500 7_3:+85354401 Msa1132480:exon
AGTGTACCATCTCCACTACA+CGG 0.655332 7_3:-85349962 None:intergenic
GTGTACCATCTCCACTACAC+GGG 0.658766 7_3:-85349961 None:intergenic
AATTATACAGGCATCTCCCG+AGG 0.660476 7_3:+85353929 Msa1132480:CDS
GGAAGAATCAAACATTGGAG+AGG 0.660823 7_3:+85347830 Msa1132480:CDS
GTAAGGCACCTGATATGTGG+CGG 0.665415 7_3:+85349987 Msa1132480:CDS
GCTTTCCGGATATCATCCGA+AGG 0.673685 7_3:+85353873 Msa1132480:CDS
ACCTAGCAAACAGAGTCTTG+AGG 0.674715 7_3:+85352657 Msa1132480:CDS
TGTGATGGAGGAGTCTGCTG+AGG 0.678814 7_3:+85352359 Msa1132480:CDS
AAATGAAGCTGTGGTTGCAG+AGG 0.679409 7_3:+85351102 Msa1132480:CDS
GTCCATTGCAGAGACCATCA+CGG 0.681705 7_3:-85354236 None:intergenic
TTATCTTTACTCAAAATCGG+GGG 0.696495 7_3:+85351040 Msa1132480:CDS
TCAGCAACTGAAAATGACCT+CGG 0.702374 7_3:+85353098 Msa1132480:CDS
AGTCGTCAAAGCAGTTCCAG+AGG 0.703422 7_3:+85352723 Msa1132480:CDS
AAACATCTTCATGCCAACCG+AGG 0.713060 7_3:-85353115 None:intergenic
TGCCTTCGAAACTAACGACG+AGG 0.720498 7_3:-85354738 None:intergenic
GTTTCAGATGAATTCATGTG+CGG 0.725014 7_3:-85352691 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATAAGTAATATTTTCT+GGG + chr7_3:85348213-85348232 Msa1132480:intron 10.0%
!!! ATAATTTTAATTTCAGTTAA+TGG - chr7_3:85348840-85348859 None:intergenic 10.0%
!!! TAAGTCTTAAAAAATATTTT+AGG - chr7_3:85350057-85350076 None:intergenic 10.0%
!!! GAATATTTTACATATATTTT+AGG + chr7_3:85350157-85350176 Msa1132480:intron 10.0%
!! AATTATTATTTATTCAAATC+AGG - chr7_3:85353232-85353251 None:intergenic 10.0%
!! TAAATCTATTATTATTTGAA+TGG + chr7_3:85353713-85353732 Msa1132480:intron 10.0%
!! TGATTATAATTTATGTGAAT+TGG + chr7_3:85347703-85347722 Msa1132480:intron 15.0%
!!! GTATAATAAGTAATATTTTC+TGG + chr7_3:85348212-85348231 Msa1132480:intron 15.0%
!! TTAAAAAGATATCAATATCA+GGG + chr7_3:85348321-85348340 Msa1132480:intron 15.0%
!! AAAATAAAGCATGTAATATT+GGG - chr7_3:85348394-85348413 None:intergenic 15.0%
!! AAAAATAAAGCATGTAATAT+TGG - chr7_3:85348395-85348414 None:intergenic 15.0%
!! AGACATAAATAAATTCTTAA+AGG - chr7_3:85349330-85349349 None:intergenic 15.0%
!!! AATAGTTTGCTAAAATTATT+GGG + chr7_3:85349685-85349704 Msa1132480:intron 15.0%
!! AATGTATTAAAATCAAAACT+CGG - chr7_3:85351570-85351589 None:intergenic 15.0%
!! CAATTACATTAAAAAATCAT+TGG - chr7_3:85351745-85351764 None:intergenic 15.0%
!!! CAATGATTTTTTAATGTAAT+TGG + chr7_3:85351743-85351762 Msa1132480:intron 15.0%
!!! AACAGTATAAAGAATTTTTA+TGG + chr7_3:85352949-85352968 Msa1132480:CDS 15.0%
!!! TTCATATCTTTTTTTTTTTG+AGG + chr7_3:85353471-85353490 Msa1132480:intron 15.0%
!!! TCATATCTTTTTTTTTTTGA+GGG + chr7_3:85353472-85353491 Msa1132480:intron 15.0%
!!! TATTTTTGACATAATTTGTA+AGG + chr7_3:85353509-85353528 Msa1132480:intron 15.0%
!!! ATTTATGTTATTGCATTTTA+TGG + chr7_3:85354462-85354481 Msa1132480:three_prime_UTR 15.0%
!!! ATTTTATCATTTAACATTCA+CGG - chr7_3:85354712-85354731 None:intergenic 15.0%
!!! AAATGAATTTTGTGTTTGTT+TGG + chr7_3:85347549-85347568 Msa1132480:intron 20.0%
!!! TGAGGTATTAAAAATGATTA+TGG + chr7_3:85347644-85347663 Msa1132480:intron 20.0%
!! GTCAAATAAACAAGTTAATT+AGG - chr7_3:85348239-85348258 None:intergenic 20.0%
!! GTTAAAAAGATATCAATATC+AGG + chr7_3:85348320-85348339 Msa1132480:intron 20.0%
!! TAAAAAGATATCAATATCAG+GGG + chr7_3:85348322-85348341 Msa1132480:intron 20.0%
!!! ATATTAAACTAATTTAGCTC+TGG + chr7_3:85348657-85348676 Msa1132480:intron 20.0%
!! TTAAAGCTAGAAAATGAAAT+TGG + chr7_3:85348952-85348971 Msa1132480:CDS 20.0%
!! CTAAAACAAAGAAAAATGAA+AGG - chr7_3:85349516-85349535 None:intergenic 20.0%
!! ACAATCAAAGCAATTAAAAA+TGG - chr7_3:85349648-85349667 None:intergenic 20.0%
!!! CAATAGTTTGCTAAAATTAT+TGG + chr7_3:85349684-85349703 Msa1132480:intron 20.0%
!!! CTAGTTTCTTATTTGTAATT+AGG + chr7_3:85349742-85349761 Msa1132480:intron 20.0%
!!! TTTCATAATTCCCTTTTAAA+CGG - chr7_3:85349883-85349902 None:intergenic 20.0%
!!! CAAATGATTACAAAGTTTTT+AGG - chr7_3:85350449-85350468 None:intergenic 20.0%
!! ATTTAGTCACAAAAAGTTAA+TGG + chr7_3:85350603-85350622 Msa1132480:intron 20.0%
!!! ATCCATAAATTTTATGAACA+CGG - chr7_3:85351269-85351288 None:intergenic 20.0%
!!! TTATTAGATTTTCATGTACT+GGG - chr7_3:85351349-85351368 None:intergenic 20.0%
!!! ACTAAAACTTTAGAATGTAT+AGG - chr7_3:85351622-85351641 None:intergenic 20.0%
!!! TATACATTCTAAAGTTTTAG+TGG + chr7_3:85351621-85351640 Msa1132480:intron 20.0%
!! GTATCATTGCATAATATTAA+AGG - chr7_3:85351673-85351692 None:intergenic 20.0%
!!! TTAAAGTTGTTTGATTTTTG+AGG + chr7_3:85352131-85352150 Msa1132480:intron 20.0%
!! AAAATGAATATATACGAACT+TGG - chr7_3:85352577-85352596 None:intergenic 20.0%
!!! TCGTATATATTCATTTTAAC+TGG + chr7_3:85352580-85352599 Msa1132480:intron 20.0%
!!! AGACTTTTTTTATTACATGA+TGG + chr7_3:85353186-85353205 Msa1132480:intron 20.0%
!! TTTATTCAAATCAGGAAAAT+GGG - chr7_3:85353224-85353243 None:intergenic 20.0%
!! ATTTATTCAAATCAGGAAAA+TGG - chr7_3:85353225-85353244 None:intergenic 20.0%
!! TCAAAGATAATTATATCTCT+TGG + chr7_3:85353328-85353347 Msa1132480:intron 20.0%
!!! TTTTATCATTTAACATTCAC+GGG - chr7_3:85354711-85354730 None:intergenic 20.0%
!! AGTAGTAGTTTGAGAATTTT+CGG - chr7_3:85347331-85347350 None:intergenic 25.0%
! TGTAATAAGAATCAAAGGAA+GGG - chr7_3:85347380-85347399 None:intergenic 25.0%
! TTGTAATAAGAATCAAAGGA+AGG - chr7_3:85347381-85347400 None:intergenic 25.0%
! TTCCTTTGATTCTTATTACA+AGG + chr7_3:85347380-85347399 Msa1132480:CDS 25.0%
! TTCCTTGTAATAAGAATCAA+AGG - chr7_3:85347385-85347404 None:intergenic 25.0%
!! CATCATTTAGAATCAATTCT+AGG + chr7_3:85347469-85347488 Msa1132480:CDS 25.0%
! TATGTGAATTGGTTATTTGT+AGG + chr7_3:85347714-85347733 Msa1132480:intron 25.0%
!!! ATAGAACCAACAAAAGTATT+AGG + chr7_3:85347901-85347920 Msa1132480:intron 25.0%
!!! TAGAACCAACAAAAGTATTA+GGG + chr7_3:85347902-85347921 Msa1132480:intron 25.0%
!! AATATCCCTAATACTTTTGT+TGG - chr7_3:85347910-85347929 None:intergenic 25.0%
!! TCCCTAAATCATTTTCTAAA+GGG - chr7_3:85348607-85348626 None:intergenic 25.0%
!! ATCCCTAAATCATTTTCTAA+AGG - chr7_3:85348608-85348627 None:intergenic 25.0%
!!! TTTCTAGCTTTAAAAATTCG+TGG - chr7_3:85348945-85348964 None:intergenic 25.0%
! GATTGAAAGAGAATATAAAG+TGG - chr7_3:85349015-85349034 None:intergenic 25.0%
! AATCTTCATGATCATACAAA+AGG + chr7_3:85349031-85349050 Msa1132480:intron 25.0%
!! TTTTATTCTAGTACTCTGAA+TGG + chr7_3:85349061-85349080 Msa1132480:intron 25.0%
! ATATATTACAGAGTTTACAC+AGG + chr7_3:85349137-85349156 Msa1132480:intron 25.0%
! TGATACTTTAACAGAAATCA+CGG + chr7_3:85349222-85349241 Msa1132480:intron 25.0%
!!! CTAATGTTTGTTTTTGACAT+AGG + chr7_3:85349350-85349369 Msa1132480:intron 25.0%
!! CTTTGATTGTCAATTGTTTT+TGG + chr7_3:85349658-85349677 Msa1132480:intron 25.0%
! ATGATTAGTAACAATTAGGT+TGG - chr7_3:85349837-85349856 None:intergenic 25.0%
! CTTCATGATTAGTAACAATT+AGG - chr7_3:85349841-85349860 None:intergenic 25.0%
! AAAAGGGAATTATGAAAGAA+TGG + chr7_3:85349886-85349905 Msa1132480:CDS 25.0%
!!! GCTTTTTCCAATTAGAAAAT+TGG + chr7_3:85350247-85350266 Msa1132480:intron 25.0%
!! CCTATTACCAATTTTCTAAT+TGG - chr7_3:85350257-85350276 None:intergenic 25.0%
!! CCAATTAGAAAATTGGTAAT+AGG + chr7_3:85350254-85350273 Msa1132480:intron 25.0%
!!! TTACAAAGTTTTTAGGATGA+GGG - chr7_3:85350442-85350461 None:intergenic 25.0%
!!! ATTACAAAGTTTTTAGGATG+AGG - chr7_3:85350443-85350462 None:intergenic 25.0%
! TAACTATGACAAATCTAGTT+TGG - chr7_3:85350557-85350576 None:intergenic 25.0%
! TATTAATCTGGAAGAACAAA+AGG - chr7_3:85350693-85350712 None:intergenic 25.0%
! TATAAGGAGCAATATTAATC+TGG - chr7_3:85350705-85350724 None:intergenic 25.0%
!!! TTGCTCCTTATATGTTTTAA+AGG + chr7_3:85350713-85350732 Msa1132480:intron 25.0%
!!! TGCTCCTTATATGTTTTAAA+GGG + chr7_3:85350714-85350733 Msa1132480:intron 25.0%
! TATTAATCTGGAAGAACAAA+AGG - chr7_3:85350693-85350712 None:intergenic 25.0%
!!! TCTTTAAAACATATAAGGAG+CGG - chr7_3:85350796-85350815 None:intergenic 25.0%
!!! TGTGCTCTTTAAAACATATA+AGG - chr7_3:85350801-85350820 None:intergenic 25.0%
!!! AAAAACATTATTTTGCAGCA+AGG + chr7_3:85350899-85350918 Msa1132480:intron 25.0%
!! ATTATGTTGCTTACATATCT+AGG + chr7_3:85350933-85350952 Msa1132480:intron 25.0%
! GATAATCAATATAGTTGTTG+AGG - chr7_3:85351014-85351033 None:intergenic 25.0%
!! ACAACTATATTGATTATCTC+AGG + chr7_3:85351016-85351035 Msa1132480:intron 25.0%
! GGTTTATCTTTACTCAAAAT+CGG + chr7_3:85351037-85351056 Msa1132480:intron 25.0%
! GTTTATCTTTACTCAAAATC+GGG + chr7_3:85351038-85351057 Msa1132480:CDS 25.0%
! TTTATCTTTACTCAAAATCG+GGG + chr7_3:85351039-85351058 Msa1132480:CDS 25.0%
! TACCGTGTTCATAAAATTTA+TGG + chr7_3:85351264-85351283 Msa1132480:intron 25.0%
!! TTTTTCTAAGTGTGTATGTA+AGG - chr7_3:85351295-85351314 None:intergenic 25.0%
! CACTTAGAAAAAATTCAACA+CGG + chr7_3:85351303-85351322 Msa1132480:intron 25.0%
!! CTTATTAGATTTTCATGTAC+TGG - chr7_3:85351350-85351369 None:intergenic 25.0%
! CAGTACATGAAAATCTAATA+AGG + chr7_3:85351348-85351367 Msa1132480:intron 25.0%
! ATTAAAATCAAAACTCGGTT+TGG - chr7_3:85351565-85351584 None:intergenic 25.0%
!!! AGGATTTTGAAGGAAAATAA+TGG + chr7_3:85351700-85351719 Msa1132480:intron 25.0%
!!! GGATTTTGAAGGAAAATAAT+GGG + chr7_3:85351701-85351720 Msa1132480:intron 25.0%
!! ATGTAATTGGTGTTTCATAT+AGG + chr7_3:85351756-85351775 Msa1132480:intron 25.0%
!! TGTAATTGGTGTTTCATATA+GGG + chr7_3:85351757-85351776 Msa1132480:intron 25.0%
! GTTAATGTAAGCATATTGAT+GGG - chr7_3:85351930-85351949 None:intergenic 25.0%
! TGTTAATGTAAGCATATTGA+TGG - chr7_3:85351931-85351950 None:intergenic 25.0%
! TTATGGCTTCAAATATAGAA+GGG + chr7_3:85352063-85352082 Msa1132480:intron 25.0%
! TAGTAATTGTAATGTTGACA+TGG + chr7_3:85352272-85352291 Msa1132480:CDS 25.0%
! GAAAATGAAAAAACTGAAGA+TGG + chr7_3:85352315-85352334 Msa1132480:CDS 25.0%
!! ACTAAATAGTCAGGAAATTT+TGG + chr7_3:85352533-85352552 Msa1132480:intron 25.0%
!!! TCAGGAAATTTTGGTTAATA+AGG + chr7_3:85352542-85352561 Msa1132480:intron 25.0%
!!! CAGGAAATTTTGGTTAATAA+GGG + chr7_3:85352543-85352562 Msa1132480:intron 25.0%
! TAAAAGAAAGCTACAATATC+AGG + chr7_3:85352873-85352892 Msa1132480:CDS 25.0%
! AAAAGAAAGCTACAATATCA+GGG + chr7_3:85352874-85352893 Msa1132480:CDS 25.0%
!! CATCTTTAAAAAAGACAACA+GGG - chr7_3:85352918-85352937 None:intergenic 25.0%
!! TCATCTTTAAAAAAGACAAC+AGG - chr7_3:85352919-85352938 None:intergenic 25.0%
! CAAGTTCATTAAATGATCTA+TGG - chr7_3:85353381-85353400 None:intergenic 25.0%
!!! ATAATTTGCTTGGTTATGTA+TGG - chr7_3:85353915-85353934 None:intergenic 25.0%
!! GTTATTGCATTTTATGGAAA+TGG + chr7_3:85354468-85354487 Msa1132480:three_prime_UTR 25.0%
ATTCTCAAACTACTACTCAT+TGG + chr7_3:85347334-85347353 Msa1132480:CDS 30.0%
TAATTGTTGATCCACAAGAA+TGG + chr7_3:85347409-85347428 Msa1132480:CDS 30.0%
AATTGTTGATCCACAAGAAT+GGG + chr7_3:85347410-85347429 Msa1132480:CDS 30.0%
! GAATTGATTCTAAATGATGC+AGG - chr7_3:85347468-85347487 None:intergenic 30.0%
! CACGAAATCATTTTCCAATT+GGG - chr7_3:85347610-85347629 None:intergenic 30.0%
!!! ATCCAAAATTCTGTTTTAGC+GGG - chr7_3:85348109-85348128 None:intergenic 30.0%
!! CATCCAAAATTCTGTTTTAG+CGG - chr7_3:85348110-85348129 None:intergenic 30.0%
TAGAATAGTAGCAGACTATT+TGG + chr7_3:85348431-85348450 Msa1132480:intron 30.0%
AGTCATACCATGTAGAAATA+AGG - chr7_3:85348566-85348585 None:intergenic 30.0%
! TCCCCTTTAGAAAATGATTT+AGG + chr7_3:85348602-85348621 Msa1132480:intron 30.0%
!! CCCTAAATCATTTTCTAAAG+GGG - chr7_3:85348606-85348625 None:intergenic 30.0%
! CCCCTTTAGAAAATGATTTA+GGG + chr7_3:85348603-85348622 Msa1132480:intron 30.0%
AATTGGAAATATCACAAGAC+AGG + chr7_3:85348969-85348988 Msa1132480:CDS 30.0%
TAAAAAGTAGCAGTAACCTA+CGG - chr7_3:85349095-85349114 None:intergenic 30.0%
GAATTGAAAGAAAAGTGAAG+AGG + chr7_3:85349159-85349178 Msa1132480:intron 30.0%
CAAATTAAGCAAATCGAATC+AGG - chr7_3:85349469-85349488 None:intergenic 30.0%
!! AATTGGAATGTTTTTGAACC+TGG - chr7_3:85349550-85349569 None:intergenic 30.0%
!! TGGACATTCTTTTTGTTTGA+TGG - chr7_3:85349811-85349830 None:intergenic 30.0%
GGTTGTAAAGAAAGTAGAAT+TGG - chr7_3:85350036-85350055 None:intergenic 30.0%
!!! AGACTTATTTTACTTTCTGC+AGG + chr7_3:85350070-85350089 Msa1132480:intron 30.0%
GCATAGCAATTAAAACTTGT+AGG - chr7_3:85350125-85350144 None:intergenic 30.0%
! AAATTGGTAATAGGCAATGA+AGG + chr7_3:85350263-85350282 Msa1132480:intron 30.0%
!! GTTGACTTTGATTTTAATCC+TGG + chr7_3:85350323-85350342 Msa1132480:intron 30.0%
TTTATTGCAAATCTTTCTCG+AGG + chr7_3:85350374-85350393 Msa1132480:intron 30.0%
!!! TACAAAGTTTTTAGGATGAG+GGG - chr7_3:85350441-85350460 None:intergenic 30.0%
CACAAAATTAACCCATTATC+AGG - chr7_3:85350509-85350528 None:intergenic 30.0%
CTAGATTTGTCATAGTTATC+TGG + chr7_3:85350559-85350578 Msa1132480:intron 30.0%
GGTTACAAATTTCAAACAGA+AGG - chr7_3:85350647-85350666 None:intergenic 30.0%
!! TGTGCCCTTTAAAACATATA+AGG - chr7_3:85350721-85350740 None:intergenic 30.0%
TTATCTTTACTCAAAATCGG+GGG + chr7_3:85351040-85351059 Msa1132480:CDS 30.0%
AAAATTCAACACGGAGAAAT+AGG + chr7_3:85351312-85351331 Msa1132480:intron 30.0%
AAAGAGGGGATAAAGAAAAA+TGG - chr7_3:85351388-85351407 None:intergenic 30.0%
!!! TAAAGTTTTAGTGGATTCCT+GGG + chr7_3:85351630-85351649 Msa1132480:intron 30.0%
TATGCAATGATACAATCTGA+AGG + chr7_3:85351680-85351699 Msa1132480:intron 30.0%
! TACAATCTGAAGGATTTTGA+AGG + chr7_3:85351690-85351709 Msa1132480:intron 30.0%
!! TTTTGAAGGAAAATAATGGG+TGG + chr7_3:85351704-85351723 Msa1132480:intron 30.0%
!! TTTGCTGATTTGCATTTGTT+TGG + chr7_3:85351848-85351867 Msa1132480:intron 30.0%
AATTCTGACATTCAATCAGT+TGG + chr7_3:85351901-85351920 Msa1132480:intron 30.0%
TGCTTACATTAACACATTGA+TGG + chr7_3:85351937-85351956 Msa1132480:intron 30.0%
CTTATGGCTTCAAATATAGA+AGG + chr7_3:85352062-85352081 Msa1132480:intron 30.0%
TTATTACATATGAGACTACC+TGG - chr7_3:85352486-85352505 None:intergenic 30.0%
! TTATCATTCACATTTTCCTC+TGG - chr7_3:85352742-85352761 None:intergenic 30.0%
ATCTTCCAAATCATCTGTAT+GGG - chr7_3:85352770-85352789 None:intergenic 30.0%
TATCTTCCAAATCATCTGTA+TGG - chr7_3:85352771-85352790 None:intergenic 30.0%
! TATTGTAGCTTTCTTTTACC+TGG - chr7_3:85352871-85352890 None:intergenic 30.0%
TATCAATGTTTCGTGTAACA+AGG - chr7_3:85353005-85353024 None:intergenic 30.0%
CTAGTATCTAACTCTAATAG+AGG - chr7_3:85353354-85353373 None:intergenic 30.0%
!!! AACTTGAGTACTTGTTTTGT+TGG + chr7_3:85353395-85353414 Msa1132480:intron 30.0%
!! AACTGCATGTTGAGTTTTAT+TGG + chr7_3:85353428-85353447 Msa1132480:intron 30.0%
GAATGACACATAGAAGAATT+AGG - chr7_3:85353585-85353604 None:intergenic 30.0%
! GTACTAAATTAGTTTCGTCA+AGG + chr7_3:85353679-85353698 Msa1132480:intron 30.0%
ACTTATATCTCACTCATTCA+TGG - chr7_3:85353748-85353767 None:intergenic 30.0%
TATTACTGCTTGTGAATAAC+TGG + chr7_3:85353782-85353801 Msa1132480:intron 30.0%
ATTACTGCTTGTGAATAACT+GGG + chr7_3:85353783-85353802 Msa1132480:intron 30.0%
TTGTCTTTCCTGTAAGATAA+GGG - chr7_3:85353823-85353842 None:intergenic 30.0%
TTTGTCTTTCCTGTAAGATA+AGG - chr7_3:85353824-85353843 None:intergenic 30.0%
GTTATGTATGGAAGAATAAG+GGG - chr7_3:85353903-85353922 None:intergenic 30.0%
GGTTATGTATGGAAGAATAA+GGG - chr7_3:85353904-85353923 None:intergenic 30.0%
TGGTTATGTATGGAAGAATA+AGG - chr7_3:85353905-85353924 None:intergenic 30.0%
CATAACCAAGCAAATTATAC+AGG + chr7_3:85353917-85353936 Msa1132480:CDS 30.0%
! TTATGGGTAAAGGTATGTAT+CGG + chr7_3:85354057-85354076 Msa1132480:intron 30.0%
ACAGATATGTCAATGTCAAT+GGG - chr7_3:85354110-85354129 None:intergenic 30.0%
AACAGATATGTCAATGTCAA+TGG - chr7_3:85354111-85354130 None:intergenic 30.0%
!! ATTTAGGATTGAATTTTCCC+AGG - chr7_3:85354509-85354528 None:intergenic 30.0%
GAGTATGAGTACTAATACAA+AGG - chr7_3:85354590-85354609 None:intergenic 30.0%
GTCAAAACAGAGAAAACGTT+TGG + chr7_3:85347268-85347287 Msa1132480:CDS 35.0%
! AATTTTCGGAGGATAAGGAA+GGG - chr7_3:85347317-85347336 None:intergenic 35.0%
! TTGAGAATTTTCGGAGGATA+AGG - chr7_3:85347322-85347341 None:intergenic 35.0%
! AGTAGTTTGAGAATTTTCGG+AGG - chr7_3:85347328-85347347 None:intergenic 35.0%
ATGAATTGATCCCATTCTTG+TGG - chr7_3:85347423-85347442 None:intergenic 35.0%
ATTCTAAATGATGCAGGCAA+TGG - chr7_3:85347462-85347481 None:intergenic 35.0%
TGATGATATTCGTTCCCAAT+TGG + chr7_3:85347593-85347612 Msa1132480:CDS 35.0%
! GCACGAAATCATTTTCCAAT+TGG - chr7_3:85347611-85347630 None:intergenic 35.0%
! CTTGGCATTCAAATTTTTCG+CGG + chr7_3:85347797-85347816 Msa1132480:CDS 35.0%
GCTTAGGAAGAATCAAACAT+TGG + chr7_3:85347825-85347844 Msa1132480:CDS 35.0%
TTAAGGAAGGGAAGAACATT+TGG - chr7_3:85348076-85348095 None:intergenic 35.0%
GTTCTTCCCTTCCTTAATAT+AGG + chr7_3:85348079-85348098 Msa1132480:intron 35.0%
!!! AAAATTCTGTTTTAGCGGGA+AGG - chr7_3:85348105-85348124 None:intergenic 35.0%
! TTCCCGCTAAAACAGAATTT+TGG + chr7_3:85348104-85348123 Msa1132480:intron 35.0%
!! CTTAGTGTTTTGCTATCCAT+TGG + chr7_3:85348268-85348287 Msa1132480:intron 35.0%
!! TGCTATCCATTGGTTTGAAA+TGG + chr7_3:85348278-85348297 Msa1132480:intron 35.0%
!! GCTATCCATTGGTTTGAAAT+GGG + chr7_3:85348279-85348298 Msa1132480:intron 35.0%
!! GATCTGTCCTTATTTCTACA+TGG + chr7_3:85348556-85348575 Msa1132480:intron 35.0%
TTACATATAGCCCTTGAAGT+TGG + chr7_3:85348709-85348728 Msa1132480:intron 35.0%
TGAGAATTTAGCAGAATCAG+AGG - chr7_3:85348918-85348937 None:intergenic 35.0%
TCTGATTCTGCTAAATTCTC+AGG + chr7_3:85348917-85348936 Msa1132480:intron 35.0%
AAAAAGTAGCAGTAACCTAC+GGG - chr7_3:85349094-85349113 None:intergenic 35.0%
TTGAAAGAAAAGTGAAGAGG+CGG + chr7_3:85349162-85349181 Msa1132480:intron 35.0%
TGTTGCGTAGTGATAATCTA+CGG + chr7_3:85349246-85349265 Msa1132480:intron 35.0%
TGAATGCACATCCAAGAATA+GGG - chr7_3:85349382-85349401 None:intergenic 35.0%
GCTTACTGTCAAGTACAAAA+TGG - chr7_3:85349407-85349426 None:intergenic 35.0%
GAACACGATCAAATAACAGT+TGG - chr7_3:85349931-85349950 None:intergenic 35.0%
TTTACTTTCTGCAGGAATTC+AGG + chr7_3:85350078-85350097 Msa1132480:intron 35.0%
TTACTTTCTGCAGGAATTCA+GGG + chr7_3:85350079-85350098 Msa1132480:intron 35.0%
!!! CAAGTTTTAATTGCTATGCG+AGG + chr7_3:85350126-85350145 Msa1132480:CDS 35.0%
CACAGTGAAAACACTAGATA+AGG - chr7_3:85350214-85350233 None:intergenic 35.0%
TTCACTGTGCTCAAATTTGT+TGG + chr7_3:85350225-85350244 Msa1132480:intron 35.0%
AACGAAATTTCTTGAGCAAG+AGG - chr7_3:85350306-85350325 None:intergenic 35.0%
ACGTAAGTCTAACCTGATAA+TGG + chr7_3:85350494-85350513 Msa1132480:intron 35.0%
CGTAAGTCTAACCTGATAAT+GGG + chr7_3:85350495-85350514 Msa1132480:intron 35.0%
TTTGTCATAGTTATCTGGCA+TGG + chr7_3:85350564-85350583 Msa1132480:intron 35.0%
! TTCAGTTTTCACTCAATGGT+AGG - chr7_3:85350668-85350687 None:intergenic 35.0%
! GGTTTTCAGTTTTCACTCAA+TGG - chr7_3:85350672-85350691 None:intergenic 35.0%
TATAAGGAGCGGTATTAATC+TGG - chr7_3:85350785-85350804 None:intergenic 35.0%
TTGTATAATGTTGAGCCTCA+AGG + chr7_3:85350824-85350843 Msa1132480:intron 35.0%
TCCTATTGAAAATGAAGCTG+TGG + chr7_3:85351093-85351112 Msa1132480:CDS 35.0%
! ACCACAGCTTCATTTTCAAT+AGG - chr7_3:85351097-85351116 None:intergenic 35.0%
GCACGGTATACTAATTTCTT+AGG + chr7_3:85351233-85351252 Msa1132480:intron 35.0%
! TAGATTTTCATGTACTGGGT+CGG - chr7_3:85351345-85351364 None:intergenic 35.0%
ACCTGCAAAACAGTAAAAGA+GGG - chr7_3:85351403-85351422 None:intergenic 35.0%
AACCTGCAAAACAGTAAAAG+AGG - chr7_3:85351404-85351423 None:intergenic 35.0%
! TTACTGTTTTGCAGGTTTTG+CGG + chr7_3:85351407-85351426 Msa1132480:intron 35.0%
!!! CTAAAGTTTTAGTGGATTCC+TGG + chr7_3:85351629-85351648 Msa1132480:intron 35.0%
TTTGCACTTGATTCAGCTTA+TGG + chr7_3:85352046-85352065 Msa1132480:intron 35.0%
!!! TTGTTTGATTTTTGAGGTGC+AGG + chr7_3:85352137-85352156 Msa1132480:intron 35.0%
TGGAAAGAATCACACTTCTA+CGG - chr7_3:85352212-85352231 None:intergenic 35.0%
! ACTGGACTTTTGCTCATAAT+AGG + chr7_3:85352598-85352617 Msa1132480:intron 35.0%
GTTTCAGATGAATTCATGTG+CGG - chr7_3:85352694-85352713 None:intergenic 35.0%
AACAATATCCTTGACTGACT+TGG - chr7_3:85353058-85353077 None:intergenic 35.0%
TATTGTTGCGTTGAACTTCT+CGG + chr7_3:85353071-85353090 Msa1132480:CDS 35.0%
!! AGATGCCTGTATAATTTGCT+TGG - chr7_3:85353925-85353944 None:intergenic 35.0%
TATCGGTGATGAAGAAGAAA+AGG + chr7_3:85354074-85354093 Msa1132480:intron 35.0%
ACATTGACATATCTGTTGAG+CGG + chr7_3:85354114-85354133 Msa1132480:intron 35.0%
AAAGTCTTGCAAGCAATTCT+TGG - chr7_3:85354264-85354283 None:intergenic 35.0%
! GCAAGACTTTTAATACGTCT+AGG + chr7_3:85354274-85354293 Msa1132480:CDS 35.0%
GACAATTCCTCTAACTATGT+TGG + chr7_3:85354325-85354344 Msa1132480:CDS 35.0%
AATTCCTCTAACTATGTTGG+AGG + chr7_3:85354328-85354347 Msa1132480:CDS 35.0%
TGCAGGGTTCACATAAATTT+AGG - chr7_3:85354525-85354544 None:intergenic 35.0%
AAGGTCACGAACTCAAAGAA+AGG + chr7_3:85347239-85347258 Msa1132480:CDS 40.0%
! GAATTTTCGGAGGATAAGGA+AGG - chr7_3:85347318-85347337 None:intergenic 40.0%
!!! GAAGGGTTTTGAGTCAAGAA+AGG - chr7_3:85347363-85347382 None:intergenic 40.0%
GGTTATTTGTAGGTTGCTGA+AGG + chr7_3:85347724-85347743 Msa1132480:intron 40.0%
TATTTGTAGGTTGCTGAAGG+AGG + chr7_3:85347727-85347746 Msa1132480:intron 40.0%
GGAAGAATCAAACATTGGAG+AGG + chr7_3:85347830-85347849 Msa1132480:CDS 40.0%
!!! TTCCTGCTTTTTTCGCTTCT+CGG + chr7_3:85347928-85347947 Msa1132480:intron 40.0%
! AGTACTGAGTAGTGACAAAC+TGG - chr7_3:85348051-85348070 None:intergenic 40.0%
GGAAGGCCTATATTAAGGAA+GGG - chr7_3:85348088-85348107 None:intergenic 40.0%
!! CCATTGGTTTGAAATGGGAA+CGG + chr7_3:85348284-85348303 Msa1132480:intron 40.0%
TTAAACAATGCACGTGCATG+AGG - chr7_3:85348500-85348519 None:intergenic 40.0%
TACATGGTATGACTTAGCTC+TGG + chr7_3:85348572-85348591 Msa1132480:intron 40.0%
AATGACTCCTCCAACTTCAA+GGG - chr7_3:85348722-85348741 None:intergenic 40.0%
TTGAAGTTGGAGGAGTCATT+GGG + chr7_3:85348722-85348741 Msa1132480:intron 40.0%
AAGACAGGAAGCTGTTAGTA+TGG + chr7_3:85348984-85349003 Msa1132480:CDS 40.0%
TGAAAGAAAAGTGAAGAGGC+GGG + chr7_3:85349163-85349182 Msa1132480:intron 40.0%
GAATGCACATCCAAGAATAG+GGG - chr7_3:85349381-85349400 None:intergenic 40.0%
CTGAATGCACATCCAAGAAT+AGG - chr7_3:85349383-85349402 None:intergenic 40.0%
ACTTGACAGTAAGCTACTTC+TGG + chr7_3:85349413-85349432 Msa1132480:intron 40.0%
! TCAGGACTGGTAAAAAACAG+AGG - chr7_3:85349451-85349470 None:intergenic 40.0%
TAAGCAAATCGAATCAGGAC+TGG - chr7_3:85349464-85349483 None:intergenic 40.0%
ATACACCAATCCACAAAAGC+AGG + chr7_3:85349580-85349599 Msa1132480:CDS 40.0%
ATGACACAAACCATTCCATC+AGG - chr7_3:85349613-85349632 None:intergenic 40.0%
!! AGTAACAATTAGGTTGGCTG+TGG - chr7_3:85349831-85349850 None:intergenic 40.0%
!!! TTTTAGGGCTTGTCGTTGTT+AGG + chr7_3:85350173-85350192 Msa1132480:intron 40.0%
TGGTAATAGGCAATGAAGGT+TGG + chr7_3:85350267-85350286 Msa1132480:intron 40.0%
TCTTGAGCAAGAGGTCAAAT+TGG - chr7_3:85350297-85350316 None:intergenic 40.0%
TTGCAAATCTTTCTCGAGGT+TGG + chr7_3:85350378-85350397 Msa1132480:intron 40.0%
TGCAAATCTTTCTCGAGGTT+GGG + chr7_3:85350379-85350398 Msa1132480:intron 40.0%
ATTCTGAGTTGTCTTTCCCT+TGG + chr7_3:85350404-85350423 Msa1132480:intron 40.0%
!!! AAAGTTTTTAGGATGAGGGG+AGG - chr7_3:85350438-85350457 None:intergenic 40.0%
!! CTTGACTCAGAAAAGTGCTT+TGG + chr7_3:85351175-85351194 Msa1132480:intron 40.0%
ATTAGTATACCGTGCTTCGA+AGG - chr7_3:85351228-85351247 None:intergenic 40.0%
CCTGCAAAACAGTAAAAGAG+GGG - chr7_3:85351402-85351421 None:intergenic 40.0%
AGCTTCCACAACTTATTCGT+CGG + chr7_3:85351470-85351489 Msa1132480:CDS 40.0%
ACATGATATCCAGAAAACCC+AGG - chr7_3:85351650-85351669 None:intergenic 40.0%
TTCATATAGGGCAGTAGTTG+TGG + chr7_3:85351769-85351788 Msa1132480:intron 40.0%
TCATATAGGGCAGTAGTTGT+GGG + chr7_3:85351770-85351789 Msa1132480:intron 40.0%
TAGTTGTGGGTAAAATACCC+TGG + chr7_3:85351783-85351802 Msa1132480:intron 40.0%
TCAAAAGCTCGAATCAGAAG+AGG - chr7_3:85351824-85351843 None:intergenic 40.0%
GAATCAAGTGCAAAACCAAC+AGG - chr7_3:85352040-85352059 None:intergenic 40.0%
AGGTATATGACAAGAGCAGT+TGG + chr7_3:85352157-85352176 Msa1132480:intron 40.0%
ATCACACTTCTACGGAACTT+GGG - chr7_3:85352204-85352223 None:intergenic 40.0%
AATCACACTTCTACGGAACT+TGG - chr7_3:85352205-85352224 None:intergenic 40.0%
CTTTCCAGTATGTTTCCTTC+TGG + chr7_3:85352225-85352244 Msa1132480:CDS 40.0%
TTTGCCAGAAGGAAACATAC+TGG - chr7_3:85352232-85352251 None:intergenic 40.0%
GGAAGATGACATTACTAGTG+TGG + chr7_3:85352293-85352312 Msa1132480:CDS 40.0%
CTCACACACACTAAATAGTC+AGG + chr7_3:85352524-85352543 Msa1132480:intron 40.0%
TTCCAGAATAGCTGCAAGAA+CGG - chr7_3:85352635-85352654 None:intergenic 40.0%
TGCATCCCATACAGATGATT+TGG + chr7_3:85352762-85352781 Msa1132480:CDS 40.0%
! GCTGTGTTTTGTGCATTATG+CGG - chr7_3:85352838-85352857 None:intergenic 40.0%
AGCTACAATATCAGGGCAAA+TGG + chr7_3:85352881-85352900 Msa1132480:CDS 40.0%
! GATGAGCGTTTTCCATTTGA+TGG + chr7_3:85352976-85352995 Msa1132480:CDS 40.0%
GTAACAAGGTGACCATCAAA+TGG - chr7_3:85352991-85353010 None:intergenic 40.0%
TCAGCAACTGAAAATGACCT+CGG + chr7_3:85353098-85353117 Msa1132480:CDS 40.0%
CAAATAGCATGCACGTTACA+AGG + chr7_3:85353626-85353645 Msa1132480:intron 40.0%
GTACTTTGCCCTTATCTTAC+AGG + chr7_3:85353812-85353831 Msa1132480:intron 40.0%
AAGAATAAGGGGCAATCCTT+CGG - chr7_3:85353892-85353911 None:intergenic 40.0%
ATAATAACCACGCAACAACC+AGG - chr7_3:85354041-85354060 None:intergenic 40.0%
TGGTTGTTGCGTGGTTATTA+TGG + chr7_3:85354040-85354059 Msa1132480:CDS 40.0%
GGTTGTTGCGTGGTTATTAT+GGG + chr7_3:85354041-85354060 Msa1132480:CDS 40.0%
TGCGTGGTTATTATGGGTAA+AGG + chr7_3:85354047-85354066 Msa1132480:CDS 40.0%
AACTGTATTCCCTGCAGAAA+AGG - chr7_3:85354146-85354165 None:intergenic 40.0%
!! TGTTGACTCGTCAACTTTGA+GGG - chr7_3:85354179-85354198 None:intergenic 40.0%
!! TTGTTGACTCGTCAACTTTG+AGG - chr7_3:85354180-85354199 None:intergenic 40.0%
GACGAGTCAACAATAGCAAT+CGG + chr7_3:85354187-85354206 Msa1132480:CDS 40.0%
ATACGTCTAGGCACAGAAAA+TGG + chr7_3:85354286-85354305 Msa1132480:CDS 40.0%
TTCACCTCCAACATAGTTAG+AGG - chr7_3:85354335-85354354 None:intergenic 40.0%
!!! TGGTGATTTTTTCCTTCACC+TGG + chr7_3:85354488-85354507 Msa1132480:three_prime_UTR 40.0%
!!! GGTGATTTTTTCCTTCACCT+GGG + chr7_3:85354489-85354508 Msa1132480:three_prime_UTR 40.0%
! GATTGAATTTTCCCAGGTGA+AGG - chr7_3:85354503-85354522 None:intergenic 40.0%
CTGTCTCAGTAACTAATGCA+GGG - chr7_3:85354541-85354560 None:intergenic 40.0%
ACTGTCTCAGTAACTAATGC+AGG - chr7_3:85354542-85354561 None:intergenic 40.0%
!! CAAAGGAGTACTTAGAACCA+GGG - chr7_3:85354573-85354592 None:intergenic 40.0%
!! ACAAAGGAGTACTTAGAACC+AGG - chr7_3:85354574-85354593 None:intergenic 40.0%
!! CTGGTTTGATGATGCAGTTG+TGG - chr7_3:85347201-85347220 None:intergenic 45.0%
TCATCAAACCAGAGCAACCA+TGG + chr7_3:85347209-85347228 Msa1132480:exon 45.0%
CATCAAACCAGAGCAACCAT+GGG + chr7_3:85347210-85347229 Msa1132480:exon 45.0%
ATGATGCAGGCAATGGTGTT+CGG - chr7_3:85347455-85347474 None:intergenic 45.0%
TGAATGCCAAGCAAAGTTCC+CGG - chr7_3:85347788-85347807 None:intergenic 45.0%
! ATTTTTCGCGGATGCAGCTT+AGG + chr7_3:85347809-85347828 Msa1132480:CDS 45.0%
GGGAAGGCCTATATTAAGGA+AGG - chr7_3:85348089-85348108 None:intergenic 45.0%
TAGCGGGAAGGCCTATATTA+AGG - chr7_3:85348093-85348112 None:intergenic 45.0%
CCGTTCCCATTTCAAACCAA+TGG - chr7_3:85348287-85348306 None:intergenic 45.0%
AATATCAGGGGATCTCAGTC+AGG + chr7_3:85348334-85348353 Msa1132480:intron 45.0%
CATATAGCCCTTGAAGTTGG+AGG + chr7_3:85348712-85348731 Msa1132480:intron 45.0%
CAATGACTCCTCCAACTTCA+AGG - chr7_3:85348723-85348742 None:intergenic 45.0%
CTTGAAGTTGGAGGAGTCAT+TGG + chr7_3:85348721-85348740 Msa1132480:intron 45.0%
ATAGGTTCCTCCCCTATTCT+TGG + chr7_3:85349368-85349387 Msa1132480:intron 45.0%
GGTGTATAGTCTCGAGCAAT+TGG - chr7_3:85349567-85349586 None:intergenic 45.0%
!! GTGATCCTGCTTTTGTGGAT+TGG - chr7_3:85349588-85349607 None:intergenic 45.0%
CATGAAGCACAACATTTCCC+AGG + chr7_3:85349854-85349873 Msa1132480:CDS 45.0%
! TTCCCAGGATGCCGTTTAAA+AGG + chr7_3:85349869-85349888 Msa1132480:CDS 45.0%
! TCCCAGGATGCCGTTTAAAA+GGG + chr7_3:85349870-85349889 Msa1132480:CDS 45.0%
! TCCCTTTTAAACGGCATCCT+GGG - chr7_3:85349874-85349893 None:intergenic 45.0%
! TTCCCTTTTAAACGGCATCC+TGG - chr7_3:85349875-85349894 None:intergenic 45.0%
AGTGTACCATCTCCACTACA+CGG - chr7_3:85349965-85349984 None:intergenic 45.0%
TGGAGATGGTACACTTCGTA+AGG + chr7_3:85349970-85349989 Msa1132480:CDS 45.0%
! TTCGTAAGGCACCTGATATG+TGG + chr7_3:85349984-85350003 Msa1132480:CDS 45.0%
TACCATTTCCGCCACATATC+AGG - chr7_3:85349998-85350017 None:intergenic 45.0%
TTTCTGCAGGAATTCAGGGA+TGG + chr7_3:85350083-85350102 Msa1132480:intron 45.0%
TTCTGCAGGAATTCAGGGAT+GGG + chr7_3:85350084-85350103 Msa1132480:intron 45.0%
GCAAATCTTTCTCGAGGTTG+GGG + chr7_3:85350380-85350399 Msa1132480:intron 45.0%
CAAATCTTTCTCGAGGTTGG+GGG + chr7_3:85350381-85350400 Msa1132480:intron 45.0%
AGTTATCTGGCATGGCGAAT+TGG + chr7_3:85350572-85350591 Msa1132480:intron 45.0%
ACTCAAAATCGGGGGAAGAA+TGG + chr7_3:85351048-85351067 Msa1132480:CDS 45.0%
AAATGAAGCTGTGGTTGCAG+AGG + chr7_3:85351102-85351121 Msa1132480:CDS 45.0%
CGTGCTTCGAAGGTAATTAG+CGG - chr7_3:85351218-85351237 None:intergenic 45.0%
CGCTAATTACCTTCGAAGCA+CGG + chr7_3:85351216-85351235 Msa1132480:intron 45.0%
! CCCCTCTTTTACTGTTTTGC+AGG + chr7_3:85351399-85351418 Msa1132480:intron 45.0%
ACCTTCCATTTCTTGAGACC+TGG - chr7_3:85351496-85351515 None:intergenic 45.0%
!!! TAGTGGATTCCTGGGTTTTC+TGG + chr7_3:85351638-85351657 Msa1132480:intron 45.0%
! TCAGAAGAGGCATAACTACC+AGG - chr7_3:85351811-85351830 None:intergenic 45.0%
GCGAGGTTACATGCTAAAGT+TGG - chr7_3:85352016-85352035 None:intergenic 45.0%
ACGGAACTTGGGAACATCTT+TGG - chr7_3:85352193-85352212 None:intergenic 45.0%
TCCTTCTGGCAAATGCTATC+AGG + chr7_3:85352239-85352258 Msa1132480:CDS 45.0%
TCCTGATAGCATTTGCCAGA+AGG - chr7_3:85352243-85352262 None:intergenic 45.0%
GGCAAATGCTATCAGGATCT+TGG + chr7_3:85352246-85352265 Msa1132480:CDS 45.0%
AGCACTAGAGAATCCTGTGA+TGG + chr7_3:85352344-85352363 Msa1132480:CDS 45.0%
ACTAGAGAATCCTGTGATGG+AGG + chr7_3:85352347-85352366 Msa1132480:CDS 45.0%
!! TTCCTCTAGAGCATTGCATG+AGG + chr7_3:85352394-85352413 Msa1132480:CDS 45.0%
ATCCTCATGCAATGCTCTAG+AGG - chr7_3:85352399-85352418 None:intergenic 45.0%
ATGCCTCATGATCAGAACAC+TGG + chr7_3:85352420-85352439 Msa1132480:CDS 45.0%
TTGCAGCACAGCAATGAAGA+AGG - chr7_3:85352448-85352467 None:intergenic 45.0%
CAAAAAGTTTCTCCTCTGCC+AGG + chr7_3:85352465-85352484 Msa1132480:CDS 45.0%
TTCCGTTCTTGCAGCTATTC+TGG + chr7_3:85352630-85352649 Msa1132480:intron 45.0%
ACCTAGCAAACAGAGTCTTG+AGG + chr7_3:85352657-85352676 Msa1132480:CDS 45.0%
TCCTCAAGACTCTGTTTGCT+AGG - chr7_3:85352661-85352680 None:intergenic 45.0%
GTCCTCTAACACGTGAAGAA+CGG + chr7_3:85352791-85352810 Msa1132480:CDS 45.0%
TTCCGTTCTTCACGTGTTAG+AGG - chr7_3:85352796-85352815 None:intergenic 45.0%
ACGTGAAGAACGGAATTCTG+AGG + chr7_3:85352801-85352820 Msa1132480:CDS 45.0%
TGCACAAAACACAGCAGAGA+AGG + chr7_3:85352843-85352862 Msa1132480:CDS 45.0%
CAATATCAGGGCAAATGGAG+AGG + chr7_3:85352886-85352905 Msa1132480:CDS 45.0%
CTATGTCTCCAAGTCAGTCA+AGG + chr7_3:85353047-85353066 Msa1132480:CDS 45.0%
CAACTGAAAATGACCTCGGT+TGG + chr7_3:85353102-85353121 Msa1132480:CDS 45.0%
AAACATCTTCATGCCAACCG+AGG - chr7_3:85353118-85353137 None:intergenic 45.0%
GAAAGACAAACAGCACGAGA+AGG + chr7_3:85353834-85353853 Msa1132480:CDS 45.0%
! GATGATATCCGGAAAGCACA+TGG - chr7_3:85353870-85353889 None:intergenic 45.0%
GCAATCCTTCGGATGATATC+CGG - chr7_3:85353881-85353900 None:intergenic 45.0%
AATTATACAGGCATCTCCCG+AGG + chr7_3:85353929-85353948 Msa1132480:CDS 45.0%
! GATTTTGCTGATGCCGAGTT+TGG + chr7_3:85353993-85354012 Msa1132480:CDS 45.0%
! TGATGCCGAGTTTGGTGAAA+AGG + chr7_3:85354001-85354020 Msa1132480:CDS 45.0%
! TGCTGCCTTTTCACCAAACT+CGG - chr7_3:85354009-85354028 None:intergenic 45.0%
AAGGCAGCAAACTTATTGCC+TGG + chr7_3:85354020-85354039 Msa1132480:CDS 45.0%
! CGGCATTTTCCTTTTCTGCA+GGG + chr7_3:85354134-85354153 Msa1132480:intron 45.0%
CAACAATAGCAATCGGATGC+TGG + chr7_3:85354194-85354213 Msa1132480:CDS 45.0%
AATAGCAATCGGATGCTGGA+GGG + chr7_3:85354198-85354217 Msa1132480:CDS 45.0%
GCACAGAAAATGGCTCTTCT+GGG + chr7_3:85354296-85354315 Msa1132480:CDS 45.0%
AAAGCTGCTGTGAGTTAGAG+AGG + chr7_3:85354400-85354419 Msa1132480:exon 45.0%
AAGCTGCTGTGAGTTAGAGA+GGG + chr7_3:85354401-85354420 Msa1132480:exon 45.0%
TACTTAGAACCAGGGAGTCA+GGG - chr7_3:85354565-85354584 None:intergenic 45.0%
! AACCTCGTCGTTAGTTTCGA+AGG + chr7_3:85354736-85354755 Msa1132480:three_prime_UTR 45.0%
!!! AATATTTTACATATATTTTA+GGG + chr7_3:85350158-85350177 Msa1132480:intron 5.0%
GATAAGGAAGGGTCTGGATC+TGG - chr7_3:85347306-85347325 None:intergenic 50.0%
GAATGCCAAGCAAAGTTCCC+GGG - chr7_3:85347787-85347806 None:intergenic 50.0%
CTCCGAGAAGCGAAAAAAGC+AGG - chr7_3:85347933-85347952 None:intergenic 50.0%
TGGGAACGGAGTTGACAAGT+TGG + chr7_3:85348298-85348317 Msa1132480:intron 50.0%
ACAATGCACGTGCATGAGGA+TGG - chr7_3:85348496-85348515 None:intergenic 50.0%
CTGAATGGTTCAGTACCCGT+AGG + chr7_3:85349076-85349095 Msa1132480:intron 50.0%
TGCACATCCAAGAATAGGGG+AGG - chr7_3:85349378-85349397 None:intergenic 50.0%
!! GTTTTAGTGTGTGCTGCACC+AGG + chr7_3:85349529-85349548 Msa1132480:intron 50.0%
!! AGGCAGTGATCCTGCTTTTG+TGG - chr7_3:85349593-85349612 None:intergenic 50.0%
AAAGCAGGATCACTGCCTGA+TGG + chr7_3:85349595-85349614 Msa1132480:CDS 50.0%
AGGATCACTGCCTGATGGAA+TGG + chr7_3:85349600-85349619 Msa1132480:CDS 50.0%
GTGTACCATCTCCACTACAC+GGG - chr7_3:85349964-85349983 None:intergenic 50.0%
! GTAAGGCACCTGATATGTGG+CGG + chr7_3:85349987-85350006 Msa1132480:CDS 50.0%
! CACCTGATATGTGGCGGAAA+TGG + chr7_3:85349993-85350012 Msa1132480:CDS 50.0%
AGGAATTCAGGGATGGGACA+AGG + chr7_3:85350090-85350109 Msa1132480:intron 50.0%
GGAATTCAGGGATGGGACAA+GGG + chr7_3:85350091-85350110 Msa1132480:intron 50.0%
AGGGGAGGCTATCATTCCAA+GGG - chr7_3:85350423-85350442 None:intergenic 50.0%
TTGAGCCTCAAGGAGTAGAG+TGG + chr7_3:85350834-85350853 Msa1132480:intron 50.0%
AGTCAAGCCTGCAACTAGCA+GGG - chr7_3:85351162-85351181 None:intergenic 50.0%
! CTGTTTTGCAGGTTTTGCGG+AGG + chr7_3:85351410-85351429 Msa1132480:intron 50.0%
GCCAGGTCTCAAGAAATGGA+AGG + chr7_3:85351492-85351511 Msa1132480:CDS 50.0%
GCTCCAGTGTTCTGATCATG+AGG - chr7_3:85352426-85352445 None:intergenic 50.0%
CATATGAGACTACCTGGCAG+AGG - chr7_3:85352480-85352499 None:intergenic 50.0%
TGTGTGAGAGAGAGAGAGAG+AGG - chr7_3:85352512-85352531 None:intergenic 50.0%
AGTCGTCAAAGCAGTTCCAG+AGG + chr7_3:85352723-85352742 Msa1132480:CDS 50.0%
AACACAGCAGAGAAGGTTCC+AGG + chr7_3:85352850-85352869 Msa1132480:CDS 50.0%
GTTGCGTTGAACTTCTCGGT+TGG + chr7_3:85353075-85353094 Msa1132480:CDS 50.0%
AGACAAACAGCACGAGAAGG+TGG + chr7_3:85353837-85353856 Msa1132480:CDS 50.0%
GCTCTTCACCATGTGCTTTC+CGG + chr7_3:85353859-85353878 Msa1132480:CDS 50.0%
GCTTTCCGGATATCATCCGA+AGG + chr7_3:85353873-85353892 Msa1132480:CDS 50.0%
AGAAGACGCTTGAAGTCCTC+GGG - chr7_3:85353948-85353967 None:intergenic 50.0%
CAGAAGACGCTTGAAGTCCT+CGG - chr7_3:85353949-85353968 None:intergenic 50.0%
CTTATTGCCTGGTTGTTGCG+TGG + chr7_3:85354031-85354050 Msa1132480:CDS 50.0%
! GCGGCATTTTCCTTTTCTGC+AGG + chr7_3:85354133-85354152 Msa1132480:intron 50.0%
CAATAGCAATCGGATGCTGG+AGG + chr7_3:85354197-85354216 Msa1132480:CDS 50.0%
ATAGCAATCGGATGCTGGAG+GGG + chr7_3:85354199-85354218 Msa1132480:CDS 50.0%
GTCCATTGCAGAGACCATCA+CGG - chr7_3:85354239-85354258 None:intergenic 50.0%
GGCACAGAAAATGGCTCTTC+TGG + chr7_3:85354295-85354314 Msa1132480:CDS 50.0%
AGAAAATGGCTCTTCTGGGC+AGG + chr7_3:85354300-85354319 Msa1132480:CDS 50.0%
CTATGTTGGAGGTGAAGCAC+AGG + chr7_3:85354339-85354358 Msa1132480:CDS 50.0%
GTACTTAGAACCAGGGAGTC+AGG - chr7_3:85354566-85354585 None:intergenic 50.0%
TGCCTTCGAAACTAACGACG+AGG - chr7_3:85354741-85354760 None:intergenic 50.0%
! GATGCAGTTGTGGCGCGTTT+TGG - chr7_3:85347191-85347210 None:intergenic 55.0%
ACCAGAGCAACCATGGGTAG+AGG + chr7_3:85347216-85347235 Msa1132480:exon 55.0%
TCCTCTACCCATGGTTGCTC+TGG - chr7_3:85347220-85347239 None:intergenic 55.0%
GAGCAACCATGGGTAGAGGA+AGG + chr7_3:85347220-85347239 Msa1132480:exon 55.0%
TCGTGACCTTCCTCTACCCA+TGG - chr7_3:85347229-85347248 None:intergenic 55.0%
TCGGAGGATAAGGAAGGGTC+TGG - chr7_3:85347312-85347331 None:intergenic 55.0%
TGCTGAAGGAGGTGAGACAG+AGG + chr7_3:85347738-85347757 Msa1132480:CDS 55.0%
GAGGTGAGACAGAGGCGATT+CGG + chr7_3:85347746-85347765 Msa1132480:CDS 55.0%
GCAAAGTTCCCGGGATACCA+GGG - chr7_3:85347778-85347797 None:intergenic 55.0%
AGCAAAGTTCCCGGGATACC+AGG - chr7_3:85347779-85347798 None:intergenic 55.0%
GGTATCCCGGGAACTTTGCT+TGG + chr7_3:85347779-85347798 Msa1132480:CDS 55.0%
! GATGTCCCGTGTAGTGGAGA+TGG + chr7_3:85349956-85349975 Msa1132480:CDS 55.0%
TTTGTATCCCCTGCGAGCAG+AGG - chr7_3:85350352-85350371 None:intergenic 55.0%
GAGGGGAGGCTATCATTCCA+AGG - chr7_3:85350424-85350443 None:intergenic 55.0%
AGCTGCCACTCTACTCCTTG+AGG - chr7_3:85350842-85350861 None:intergenic 55.0%
TGTGAAGCCCTGCTAGTTGC+AGG + chr7_3:85351152-85351171 Msa1132480:intron 55.0%
GAGTCAAGCCTGCAACTAGC+AGG - chr7_3:85351163-85351182 None:intergenic 55.0%
! TTGCAGGTTTTGCGGAGGTG+TGG + chr7_3:85351415-85351434 Msa1132480:intron 55.0%
CCTGGCCGACGAATAAGTTG+TGG - chr7_3:85351478-85351497 None:intergenic 55.0%
CCACAACTTATTCGTCGGCC+AGG + chr7_3:85351475-85351494 Msa1132480:CDS 55.0%
GTCGGCCAGGTCTCAAGAAA+TGG + chr7_3:85351488-85351507 Msa1132480:CDS 55.0%
GGGTAAAATACCCTGGAGCC+TGG + chr7_3:85351790-85351809 Msa1132480:intron 55.0%
GGCATAACTACCAGGCTCCA+GGG - chr7_3:85351803-85351822 None:intergenic 55.0%
AGGCATAACTACCAGGCTCC+AGG - chr7_3:85351804-85351823 None:intergenic 55.0%
GCATGTAACCTCGCACCTGT+TGG + chr7_3:85352022-85352041 Msa1132480:intron 55.0%
GTGCAAAACCAACAGGTGCG+AGG - chr7_3:85352033-85352052 None:intergenic 55.0%
TCAGCAGACTCCTCCATCAC+AGG - chr7_3:85352360-85352379 None:intergenic 55.0%
! TGTGATGGAGGAGTCTGCTG+AGG + chr7_3:85352359-85352378 Msa1132480:CDS 55.0%
GGACTTCAAGCGTCTTCTGC+AGG + chr7_3:85353950-85353969 Msa1132480:CDS 55.0%
AATCGGATGCTGGAGGGGTA+GGG + chr7_3:85354204-85354223 Msa1132480:CDS 55.0%
GTCCGTGATGGTCTCTGCAA+TGG + chr7_3:85354234-85354253 Msa1132480:CDS 55.0%
AAATGGCTCTTCTGGGCAGG+TGG + chr7_3:85354303-85354322 Msa1132480:CDS 55.0%
AGGTGAAGCACAGGCTGTAC+AGG + chr7_3:85354348-85354367 Msa1132480:CDS 55.0%
CGTGCATTCACTTCGCGCTG+AGG + chr7_3:85347626-85347645 Msa1132480:CDS 60.0%
TTCCCGGGATACCAGGGCAA+AGG - chr7_3:85347772-85347791 None:intergenic 60.0%
CTGTGCGATGTCCCGTGTAG+TGG + chr7_3:85349950-85349969 Msa1132480:CDS 60.0%
CAATCGGATGCTGGAGGGGT+AGG + chr7_3:85354203-85354222 Msa1132480:CDS 60.0%
TAGGGCGAGGTTGTCCGTGA+TGG + chr7_3:85354222-85354241 Msa1132480:CDS 60.0%
TGAGACAGTCCCTGACTCCC+TGG + chr7_3:85354553-85354572 Msa1132480:three_prime_UTR 60.0%
! AGGCGATTCGGCCTTTGCCC+TGG + chr7_3:85347758-85347777 Msa1132480:CDS 65.0%
CGGCCTTTGCCCTGGTATCC+CGG + chr7_3:85347766-85347785 Msa1132480:CDS 65.0%
GGCCTTTGCCCTGGTATCCC+GGG + chr7_3:85347767-85347786 Msa1132480:CDS 65.0%
TCCTGGCGTCCTCTGCTCGC+AGG + chr7_3:85350340-85350359 Msa1132480:intron 70.0%
CCTGGCGTCCTCTGCTCGCA+GGG + chr7_3:85350341-85350360 Msa1132480:intron 70.0%
CTGGCGTCCTCTGCTCGCAG+GGG + chr7_3:85350342-85350361 Msa1132480:intron 70.0%
GATGCTGGAGGGGTAGGGCG+AGG + chr7_3:85354209-85354228 Msa1132480:CDS 70.0%
CCCTGCGAGCAGAGGACGCC+AGG - chr7_3:85350344-85350363 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 85347182 85354790 85347182 ID=Msa1132480;Name=Msa1132480
chr7_3 mRNA 85347182 85354790 85347182 ID=Msa1132480-mRNA-1;Parent=Msa1132480;Name=Msa1132480-mRNA-1;_AED=0.05;_eAED=0.05;_QI=46|1|1|1|1|1|14|373|817
chr7_3 exon 85347182 85347490 85347182 ID=Msa1132480-mRNA-1:exon:25480;Parent=Msa1132480-mRNA-1
chr7_3 exon 85347581 85347647 85347581 ID=Msa1132480-mRNA-1:exon:25481;Parent=Msa1132480-mRNA-1
chr7_3 exon 85347736 85347851 85347736 ID=Msa1132480-mRNA-1:exon:25482;Parent=Msa1132480-mRNA-1
chr7_3 exon 85348939 85349005 85348939 ID=Msa1132480-mRNA-1:exon:25483;Parent=Msa1132480-mRNA-1
chr7_3 exon 85349372 85349420 85349372 ID=Msa1132480-mRNA-1:exon:25484;Parent=Msa1132480-mRNA-1
chr7_3 exon 85349536 85349621 85349536 ID=Msa1132480-mRNA-1:exon:25485;Parent=Msa1132480-mRNA-1
chr7_3 exon 85349764 85350014 85349764 ID=Msa1132480-mRNA-1:exon:25486;Parent=Msa1132480-mRNA-1
chr7_3 exon 85350092 85350147 85350092 ID=Msa1132480-mRNA-1:exon:25487;Parent=Msa1132480-mRNA-1
chr7_3 exon 85351038 85351123 85351038 ID=Msa1132480-mRNA-1:exon:25488;Parent=Msa1132480-mRNA-1
chr7_3 exon 85351421 85351513 85351421 ID=Msa1132480-mRNA-1:exon:25489;Parent=Msa1132480-mRNA-1
chr7_3 exon 85352159 85352486 85352159 ID=Msa1132480-mRNA-1:exon:25490;Parent=Msa1132480-mRNA-1
chr7_3 exon 85352644 85353137 85352644 ID=Msa1132480-mRNA-1:exon:25491;Parent=Msa1132480-mRNA-1
chr7_3 exon 85353834 85354068 85353834 ID=Msa1132480-mRNA-1:exon:25492;Parent=Msa1132480-mRNA-1
chr7_3 exon 85354155 85354790 85354155 ID=Msa1132480-mRNA-1:exon:25493;Parent=Msa1132480-mRNA-1
chr7_3 five_prime_UTR 85347182 85347227 85347182 ID=Msa1132480-mRNA-1:five_prime_utr;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85347228 85347490 85347228 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85347581 85347647 85347581 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85347736 85347851 85347736 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85348939 85349005 85348939 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85349372 85349420 85349372 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85349536 85349621 85349536 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85349764 85350014 85349764 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85350092 85350147 85350092 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85351038 85351123 85351038 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85351421 85351513 85351421 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85352159 85352486 85352159 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85352644 85353137 85352644 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85353834 85354068 85353834 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 CDS 85354155 85354417 85354155 ID=Msa1132480-mRNA-1:cds;Parent=Msa1132480-mRNA-1
chr7_3 three_prime_UTR 85354418 85354790 85354418 ID=Msa1132480-mRNA-1:three_prime_utr;Parent=Msa1132480-mRNA-1
Gene Sequence

>Msa1132480

ATGGGTAGAGGAAGGTCACGAACTCAAAGAAAGGACTTTCGTCAAAACAGAGAAAACGTTTGGAAGCGTTCGAAACCAGATCCAGACCCTTCCTTATCCTCCGAAAATTCTCAAACTACTACTCATTGGACTCCTTTCTTGACTCAAAACCCTTCCTTTGATTCTTATTACAAGGAACAGTTAATTGTTGATCCACAAGAATGGGATCAATTCATCGCAGTTCTCCGAACACCATTGCCTGCATCATTTAGAATCAATTCTAGTAGTCAATTTGCTGATGATATTCGTTCCCAATTGGAAAATGATTTCGTGCATTCACTTCGCGCTGAGGTTGCTGAAGGAGGTGAGACAGAGGCGATTCGGCCTTTGCCCTGGTATCCCGGGAACTTTGCTTGGCATTCAAATTTTTCGCGGATGCAGCTTAGGAAGAATCAAACATTGGAGAGGTTCCACGAATTTTTAAAGCTAGAAAATGAAATTGGAAATATCACAAGACAGGAAGCTGTTAGTATGGTTCCTCCCCTATTCTTGGATGTGCATTCAGACCATTTTGTACTTGACATGTGTGCTGCACCAGGTTCAAAAACATTCCAATTGCTCGAGACTATACACCAATCCACAAAAGCAGGATCACTGCCTGATGGAATGGTTGTAGCAAATGATCTTGATGTTAAAAGATGTAATCTTCTCATCCATCAAACAAAAAGAATGTCCACAGCCAACCTAATTGTTACTAATCATGAAGCACAACATTTCCCAGGATGCCGTTTAAAAGGGAATTATGAAAGAATGGAGTTAGATCACAATATTCACCAACTGTTATTTGATCGTGTTCTGTGCGATGTCCCGTGTAGTGGAGATGGTACACTTCGTAAGGCACCTGATATGTGGCGGAAATGGAATTCAGGGATGGGACAAGGGCTTCACAGCCTACAAGTTTTAATTGCTATGCGAGGTTTATCTTTACTCAAAATCGGGGGAAGAATGGTTTATTCAACGTGCTCAATGAATCCTATTGAAAATGAAGCTGTGGTTGCAGAGGTTTTGCGGAGGTGTGGTGAGTCTGTCAAACTTGTTGACGTGTCTAGTGAGCTTCCACAACTTATTCGTCGGCCAGGTCTCAAGAAATGGAAGGTATATGACAAGAGCAGTTGGTTTGTCTCTTCCAAAGATGTTCCCAAGTTCCGTAGAAGTGTGATTCTTTCCAGTATGTTTCCTTCTGGCAAATGCTATCAGGATCTTGGCGATAGTAATTGTAATGTTGACATGGAAGATGACATTACTAGTGTGGAAAATGAAAAAACTGAAGATGGTATTGAAGCACTAGAGAATCCTGTGATGGAGGAGTCTGCTGAGGAAGTTTCAGATTTTCCTCTAGAGCATTGCATGAGGATAATGCCTCATGATCAGAACACTGGAGCCTTCTTCATTGCTGTGCTGCAAAAAGTTTCTCCTCTGCCAGCTATTCTGGAAAAACCTAGCAAACAGAGTCTTGAGGATGCACAAGCACCGCACATGAATTCATCTGAAACTACACTTGAAGTCGTCAAAGCAGTTCCAGAGGAAAATGTGAATGATAATGCATCCCATACAGATGATTTGGAAGATAGTCCTCTAACACGTGAAGAACGGAATTCTGAGGAAACTGAAGAACCGCATAATGCACAAAACACAGCAGAGAAGGTTCCAGGTAAAAGAAAGCTACAATATCAGGGCAAATGGAGAGGTGTTGACCCTGTTGTCTTTTTTAAAGATGAAGCAATTGTTAACAGTATAAAGAATTTTTATGGAATCGATGAGCGTTTTCCATTTGATGGTCACCTTGTTACACGAAACATTGATAACAGTAATGCAAAAAGAATTTACTATGTCTCCAAGTCAGTCAAGGATATTGTTGCGTTGAACTTCTCGGTTGGTCAGCAACTGAAAATGACCTCGGTTGGCATGAAGATGTTTGAAAGACAAACAGCACGAGAAGGTGGCTCTTCACCATGTGCTTTCCGGATATCATCCGAAGGATTGCCCCTTATTCTTCCATACATAACCAAGCAAATTATACAGGCATCTCCCGAGGACTTCAAGCGTCTTCTGCAGGACAAAGATGTAAAATATTCAGATTTTGCTGATGCCGAGTTTGGTGAAAAGGCAGCAAACTTATTGCCTGGTTGTTGCGTGGTTATTATGGGTAAAGGGAATACAGTTGCAACAGAATCCCTCAAAGTTGACGAGTCAACAATAGCAATCGGATGCTGGAGGGGTAGGGCGAGGTTGTCCGTGATGGTCTCTGCAATGGACTGCCAAGAATTGCTTGCAAGACTTTTAATACGTCTAGGCACAGAAAATGGCTCTTCTGGGCAGGTGGACAATTCCTCTAACTATGTTGGAGGTGAAGCACAGGCTGTACAGGAGTTGAACGATAAAAGTGATAATGATTTGAAAGCTGCTGTGAGTTAG
Protein sequence

>Msa1132480

MGRGRSRTQRKDFRQNRENVWKRSKPDPDPSLSSENSQTTTHWTPFLTQNPSFDSYYKEQLIVDPQEWDQFIAVLRTPLPASFRINSSSQFADDIRSQLENDFVHSLRAEVAEGGETEAIRPLPWYPGNFAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSDHFVLDMCAAPGSKTFQLLETIHQSTKAGSLPDGMVVANDLDVKRCNLLIHQTKRMSTANLIVTNHEAQHFPGCRLKGNYERMELDHNIHQLLFDRVLCDVPCSGDGTLRKAPDMWRKWNSGMGQGLHSLQVLIAMRGLSLLKIGGRMVYSTCSMNPIENEAVVAEVLRRCGESVKLVDVSSELPQLIRRPGLKKWKVYDKSSWFVSSKDVPKFRRSVILSSMFPSGKCYQDLGDSNCNVDMEDDITSVENEKTEDGIEALENPVMEESAEEVSDFPLEHCMRIMPHDQNTGAFFIAVLQKVSPLPAILEKPSKQSLEDAQAPHMNSSETTLEVVKAVPEENVNDNASHTDDLEDSPLTREERNSEETEEPHNAQNTAEKVPGKRKLQYQGKWRGVDPVVFFKDEAIVNSIKNFYGIDERFPFDGHLVTRNIDNSNAKRIYYVSKSVKDIVALNFSVGQQLKMTSVGMKMFERQTAREGGSSPCAFRISSEGLPLILPYITKQIIQASPEDFKRLLQDKDVKYSDFADAEFGEKAANLLPGCCVVIMGKGNTVATESLKVDESTIAIGCWRGRARLSVMVSAMDCQELLARLLIRLGTENGSSGQVDNSSNYVGGEAQAVQELNDKSDNDLKAAVS*