Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321110 | XP_013463249.1 | 96.013 | 301 | 5 | 1 | 1 | 301 | 1 | 294 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321110 | sp|Q6A070|TGRM1_MOUSE | 27.861 | 201 | 136 | 3 | 62 | 258 | 1252 | 1447 | 4.48e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0062340 | Msa0321110 | 0.802426 | 5.640813e-49 | -8.615850e-47 |
| Msa0219560 | Msa0321110 | 0.992461 | 1.977556e-193 | -8.615850e-47 |
| Msa0239390 | Msa0321110 | 0.944826 | 9.542271e-104 | -8.615850e-47 |
| Msa0279180 | Msa0321110 | 0.975983 | 5.787730e-141 | -8.615850e-47 |
| Msa0321110 | Msa0383000 | 0.806460 | 8.138249e-50 | -8.615850e-47 |
| Msa0321110 | Msa0481890 | 0.802334 | 5.894609e-49 | -8.615850e-47 |
| Msa0321110 | Msa0581840 | 0.800718 | 1.263821e-48 | -8.615850e-47 |
| Msa0321110 | Msa0606100 | 0.823591 | 1.275440e-53 | -8.615850e-47 |
| Msa0321110 | Msa0621710 | 0.800224 | 1.593237e-48 | -8.615850e-47 |
| Msa0321110 | Msa0714520 | 0.807039 | 6.141915e-50 | -8.615850e-47 |
| Msa0321110 | Msa0754450 | 0.800282 | 1.550392e-48 | -8.615850e-47 |
| Msa0321110 | Msa0805680 | 0.835301 | 1.817500e-56 | -8.615850e-47 |
| Msa0321110 | Msa0811020 | 0.806412 | 8.328736e-50 | -8.615850e-47 |
| Msa0321110 | Msa1084530 | 0.800516 | 1.389567e-48 | -8.615850e-47 |
| Msa0321110 | Msa1125990 | 0.800010 | 1.761543e-48 | -8.615850e-47 |
| Msa0321110 | Msa1201540 | 0.804774 | 1.838151e-49 | -8.615850e-47 |
| Msa0321110 | Msa1254540 | 0.811887 | 5.592396e-51 | -8.615850e-47 |
| Msa0321110 | Msa1263900 | 0.804559 | 2.038012e-49 | -8.615850e-47 |
| Msa0321110 | Msa1339170 | 0.813023 | 3.156403e-51 | -8.615850e-47 |
| Msa0321110 | Msa1367180 | 0.802284 | 6.034436e-49 | -8.615850e-47 |
| Msa0321110 | Msa1368750 | 0.802645 | 5.085893e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321110 | MtrunA17_Chr2g0295931 | 96.013 | 301 | 5 | 1 | 1 | 301 | 1 | 294 | 0.0 | 572 |
| Msa0321110 | MtrunA17_Chr6g0451021 | 35.227 | 352 | 163 | 6 | 5 | 301 | 31 | 372 | 4.74e-58 | 191 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0321110 | AT4G15830.1 | 56.066 | 305 | 116 | 5 | 1 | 299 | 1 | 293 | 3.76e-110 | 321 |
| Msa0321110 | AT3G01450.1 | 40.711 | 253 | 140 | 2 | 54 | 301 | 67 | 314 | 3.11e-62 | 200 |
| Msa0321110 | AT3G01450.2 | 40.711 | 253 | 140 | 2 | 54 | 301 | 67 | 314 | 3.11e-62 | 200 |
| Msa0321110 | AT5G14790.1 | 39.695 | 262 | 139 | 4 | 54 | 301 | 70 | 326 | 3.83e-62 | 201 |
| Msa0321110 | AT3G18530.3 | 48.227 | 141 | 68 | 1 | 94 | 234 | 9 | 144 | 5.93e-35 | 127 |
| Msa0321110 | AT3G18530.2 | 49.231 | 130 | 61 | 1 | 105 | 234 | 1 | 125 | 3.89e-32 | 119 |
| Msa0321110 | AT3G18530.1 | 50.000 | 124 | 57 | 1 | 111 | 234 | 124 | 242 | 1.89e-29 | 115 |
Find 86 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGATCTGACATGGGTTTC+AGG | 0.101075 | 2_4:+22190512 | None:intergenic |
| TGCTGTTGCTGCTGTGGTTT+TGG | 0.159324 | 2_4:+22190610 | None:intergenic |
| AGTGCCAAACTTTACCATTT+TGG | 0.211534 | 2_4:+22189459 | None:intergenic |
| TTTGGGTCTTTCTTGGGTTA+TGG | 0.250336 | 2_4:+22190660 | None:intergenic |
| GCAGAGTTTGATTGAAGATT+TGG | 0.260333 | 2_4:-22190386 | Msa0321110:intron |
| ATTGAGGAAATGGAGGAGTT+TGG | 0.270099 | 2_4:-22189278 | Msa0321110:CDS |
| AAAATTGAAAGAGCATTAAT+TGG | 0.272815 | 2_4:+22189086 | None:intergenic |
| TCCATTTCTGAGGCATTTGA+TGG | 0.287057 | 2_4:-22190045 | Msa0321110:CDS |
| TTTATGCAAAACCTCTATTA+TGG | 0.287797 | 2_4:-22190115 | Msa0321110:CDS |
| CTTGCTGCATCTCTTGCCTC+TGG | 0.306269 | 2_4:+22189206 | None:intergenic |
| TTCTGAGGCATTTGATGGCT+TGG | 0.330088 | 2_4:-22190040 | Msa0321110:intron |
| ATCCAAATGTGTCTCCAAAA+TGG | 0.333713 | 2_4:-22189473 | Msa0321110:intron |
| TTGAGGAAATGGAGGAGTTT+GGG | 0.339563 | 2_4:-22189277 | Msa0321110:CDS |
| CTTACTTGAATCTGAGCTTC+AGG | 0.347459 | 2_4:+22190493 | None:intergenic |
| ATCGATCAATGTAATAGAAA+TGG | 0.369859 | 2_4:+22190742 | None:intergenic |
| TGAATAAGATGTTATAGAAA+TGG | 0.374697 | 2_4:+22190828 | None:intergenic |
| TTCCATTGCTTCAGAAACTA+AGG | 0.397711 | 2_4:-22189549 | Msa0321110:CDS |
| GCCATCAAATGCCTCAGAAA+TGG | 0.405071 | 2_4:+22190044 | None:intergenic |
| AGATAGTTAAACTTTAGAAT+TGG | 0.410763 | 2_4:-22189061 | Msa0321110:exon |
| TGTGGAAGAGGAACAGAAGA+TGG | 0.425574 | 2_4:-22189144 | Msa0321110:CDS |
| TTTATTTGTGGCAGTGCTCA+TGG | 0.431114 | 2_4:-22188994 | Msa0321110:three_prime_UTR |
| TTGCTGCATCTCTTGCCTCT+GGG | 0.433357 | 2_4:+22189207 | None:intergenic |
| GGTCTTTCTTGGGTTATGGT+TGG | 0.436130 | 2_4:+22190664 | None:intergenic |
| GTGAGTCCTTGAACGATGTT+AGG | 0.437164 | 2_4:-22190339 | Msa0321110:CDS |
| AAAATCAATCCTTACAAAAT+GGG | 0.442598 | 2_4:+22190283 | None:intergenic |
| CAGCTTTAGCCCTGATCCTA+AGG | 0.446309 | 2_4:+22189506 | None:intergenic |
| TTGTGTGTGAAGAAGCTGAT+AGG | 0.451109 | 2_4:-22189606 | Msa0321110:CDS |
| TTGTAAATTCTTAATGAGAC+CGG | 0.461778 | 2_4:+22188819 | None:intergenic |
| GTTGGAAGAGCATTGTCAAT+AGG | 0.465838 | 2_4:+22190682 | None:intergenic |
| TAGAAGTTTAGCTTTATTTG+TGG | 0.467412 | 2_4:-22189006 | Msa0321110:three_prime_UTR |
| TGATAGGGCACTTGGATCAA+TGG | 0.469114 | 2_4:-22189590 | Msa0321110:CDS |
| AAATCGCCTAACATCGTTCA+AGG | 0.470782 | 2_4:+22190333 | None:intergenic |
| GCAGCAGGGAATTGAGGAAA+TGG | 0.471845 | 2_4:-22189288 | Msa0321110:intron |
| TAAAGAAAATTTAGATTAGG+AGG | 0.477102 | 2_4:-22188862 | Msa0321110:three_prime_UTR |
| CATACAGGAATGGGCTGGAA+GGG | 0.477162 | 2_4:+22190878 | None:intergenic |
| TAATCAATGGTGGGTTCCAA+TGG | 0.479929 | 2_4:+22190550 | None:intergenic |
| AACCTTAGTTTCTGAAGCAA+TGG | 0.485737 | 2_4:+22189547 | None:intergenic |
| AGAAAATTTAGATTAGGAGG+TGG | 0.490993 | 2_4:-22188859 | Msa0321110:three_prime_UTR |
| ATTATGGCAGCAGGGAATTG+AGG | 0.494357 | 2_4:-22189294 | Msa0321110:intron |
| TAACGGTAACATACAGGAAT+GGG | 0.495863 | 2_4:+22190869 | None:intergenic |
| GCTGCTGCTGAAATCTTCTC+AGG | 0.502458 | 2_4:-22189638 | Msa0321110:CDS |
| TATTGCAACTTCAGTGTATG+AGG | 0.503870 | 2_4:-22189180 | Msa0321110:CDS |
| AGTGTATGAGGCAATCATTA+AGG | 0.512370 | 2_4:-22189168 | Msa0321110:CDS |
| GTCAGATGAAATATAATCAA+TGG | 0.512715 | 2_4:+22190537 | None:intergenic |
| GGTTGTTGCTGTTGCTGCTG+TGG | 0.527140 | 2_4:+22190604 | None:intergenic |
| TGAGGCAATCATTAAGGATG+TGG | 0.528288 | 2_4:-22189162 | Msa0321110:CDS |
| ATCAGAAGCAGCCATAATAG+AGG | 0.530469 | 2_4:+22190104 | None:intergenic |
| AATCATTAAGGATGTGGAAG+AGG | 0.535129 | 2_4:-22189156 | Msa0321110:CDS |
| TAGGGATAAAATTGTGTTGG+TGG | 0.538015 | 2_4:-22190169 | Msa0321110:CDS |
| AATTTAGATTAGGAGGTGGA+AGG | 0.538518 | 2_4:-22188855 | Msa0321110:three_prime_UTR |
| GTTTGATCCTTCCATTTCTG+AGG | 0.538757 | 2_4:-22190055 | Msa0321110:CDS |
| GGAAATGGAGGAGTTTGGGA+TGG | 0.539001 | 2_4:-22189273 | Msa0321110:CDS |
| AATCAATGGTGGGTTCCAAT+GGG | 0.540052 | 2_4:+22190551 | None:intergenic |
| GAAGAAGCTGATAGGGCACT+TGG | 0.542782 | 2_4:-22189598 | Msa0321110:CDS |
| TGTACGTTTGCTCATACTTG+AGG | 0.543866 | 2_4:-22189035 | Msa0321110:three_prime_UTR |
| TGATGAAAATCAAATCCCAT+TGG | 0.544278 | 2_4:-22190566 | Msa0321110:CDS |
| GTGGTGTAACGGTAACATAC+AGG | 0.546224 | 2_4:+22190863 | None:intergenic |
| CTGAGCTTCAGGATCTGACA+TGG | 0.548880 | 2_4:+22190504 | None:intergenic |
| ACATACAGGAATGGGCTGGA+AGG | 0.549563 | 2_4:+22190877 | None:intergenic |
| AATTGTGTTGGTGGTGGTGA+AGG | 0.551275 | 2_4:-22190160 | Msa0321110:CDS |
| AGTTTCTGAAGCAATGGAAG+AGG | 0.555513 | 2_4:+22189553 | None:intergenic |
| ATACAGGAATGGGCTGGAAG+GGG | 0.560423 | 2_4:+22190879 | None:intergenic |
| GGATAAAATTGTGTTGGTGG+TGG | 0.561353 | 2_4:-22190166 | Msa0321110:CDS |
| AAGCAATGGAAGAGGTGTCA+TGG | 0.567617 | 2_4:+22189561 | None:intergenic |
| GAAATCTAATAATTTGCTGA+TGG | 0.572246 | 2_4:+22188957 | None:intergenic |
| AGATGAAATATAATCAATGG+TGG | 0.574708 | 2_4:+22190540 | None:intergenic |
| AGGAACAGAAGATGGAAGTG+TGG | 0.576946 | 2_4:-22189136 | Msa0321110:CDS |
| GTAACGGTAACATACAGGAA+TGG | 0.579763 | 2_4:+22190868 | None:intergenic |
| GATTAGGGATAAAATTGTGT+TGG | 0.587172 | 2_4:-22190172 | Msa0321110:intron |
| GAAATGGAAAGAGACGTTAG+TGG | 0.596462 | 2_4:+22190844 | None:intergenic |
| TAGGGCACTTGGATCAATGG+TGG | 0.605281 | 2_4:-22189587 | Msa0321110:CDS |
| GGTAACATACAGGAATGGGC+TGG | 0.609763 | 2_4:+22190873 | None:intergenic |
| TTTATAATTATAAATAACAA+CGG | 0.610089 | 2_4:-22188896 | Msa0321110:three_prime_UTR |
| TAATTGGTGTTAGCTTAGAG+TGG | 0.610320 | 2_4:+22189102 | None:intergenic |
| AGGGCACTTGGATCAATGGT+GGG | 0.613700 | 2_4:-22189586 | Msa0321110:CDS |
| TGTGTGTGAAGAAGCTGATA+GGG | 0.615409 | 2_4:-22189605 | Msa0321110:CDS |
| GATGAAATATAATCAATGGT+GGG | 0.618538 | 2_4:+22190541 | None:intergenic |
| AAGAGACGTTAGTGGTGTAA+CGG | 0.624816 | 2_4:+22190852 | None:intergenic |
| TCAAATGCCTCAGAAATGGA+AGG | 0.629609 | 2_4:+22190048 | None:intergenic |
| TGAGCTTCAGGATCTGACAT+GGG | 0.635005 | 2_4:+22190505 | None:intergenic |
| GCAGGGAATTGAGGAAATGG+AGG | 0.641748 | 2_4:-22189285 | Msa0321110:intron |
| TCTTTCTCAAACAACAACAA+TGG | 0.642542 | 2_4:-22190713 | Msa0321110:exon |
| TAAATTCTTAATGAGACCGG+CGG | 0.645456 | 2_4:+22188822 | None:intergenic |
| GGAAGGTTAGAGAAAGCCGC+CGG | 0.653729 | 2_4:-22188838 | Msa0321110:three_prime_UTR |
| TCATCATTGGAAGAAGTACG+AGG | 0.693109 | 2_4:+22190583 | None:intergenic |
| AGTGAATGATAGACTCCCAG+AGG | 0.721160 | 2_4:-22189222 | Msa0321110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAAAATATTAATTCTAT+TGG | - | chr2_4:22189997-22190016 | Msa0321110:intron | 10.0% |
| !!! | ATTAAATCAATTTGTTTTAT+TGG | - | chr2_4:22190358-22190377 | Msa0321110:CDS | 10.0% |
| !!! | TTTTAAAGAAAATTTAGATT+AGG | - | chr2_4:22190845-22190864 | Msa0321110:five_prime_UTR | 10.0% |
| !! | TTTCAAAATATTAATTCTAT+TGG | - | chr2_4:22189997-22190016 | Msa0321110:intron | 10.0% |
| !!! | ATTAAATCAATTTGTTTTAT+TGG | - | chr2_4:22190358-22190377 | Msa0321110:CDS | 10.0% |
| !!! | TTTTAAAGAAAATTTAGATT+AGG | - | chr2_4:22190845-22190864 | Msa0321110:five_prime_UTR | 10.0% |
| !!! | AAGTTTTGAAATTTTTGTTA+TGG | - | chr2_4:22189468-22189487 | Msa0321110:intron | 15.0% |
| !!! | AAGTTTTGAAATTTTTGTTA+TGG | - | chr2_4:22189468-22189487 | Msa0321110:intron | 15.0% |
| !! | TGAATAAGATGTTATAGAAA+TGG | + | chr2_4:22188885-22188904 | None:intergenic | 20.0% |
| !!! | GAATTTTTTTACTTGTGATT+TGG | - | chr2_4:22189274-22189293 | Msa0321110:CDS | 20.0% |
| !! | AAAATCAATCCTTACAAAAT+GGG | + | chr2_4:22189430-22189449 | None:intergenic | 20.0% |
| !! | AAAAATCAATCCTTACAAAA+TGG | + | chr2_4:22189431-22189450 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTATGGATTGAAT+TGG | - | chr2_4:22189478-22189497 | Msa0321110:CDS | 20.0% |
| !!! | TTTTTGTTATGGATTGAATT+GGG | - | chr2_4:22189479-22189498 | Msa0321110:CDS | 20.0% |
| !! | AATTCATATACACCATTAAT+TGG | + | chr2_4:22190341-22190360 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTATTGGTGTTTT+TGG | - | chr2_4:22190367-22190386 | Msa0321110:CDS | 20.0% |
| !!! | TTTGTTTTATTGGTGTTTTT+GGG | - | chr2_4:22190368-22190387 | Msa0321110:CDS | 20.0% |
| !!! | GTTTCTAAAGAGTATTATTA+TGG | - | chr2_4:22190400-22190419 | Msa0321110:intron | 20.0% |
| !!! | AAAATTGAAAGAGCATTAAT+TGG | + | chr2_4:22190627-22190646 | None:intergenic | 20.0% |
| !!! | AGATAGTTAAACTTTAGAAT+TGG | - | chr2_4:22190649-22190668 | Msa0321110:CDS | 20.0% |
| !! | TAAAGAAAATTTAGATTAGG+AGG | - | chr2_4:22190848-22190867 | Msa0321110:five_prime_UTR | 20.0% |
| !! | AATTTACAATGAAATTTACG+TGG | - | chr2_4:22190905-22190924 | Msa0321110:five_prime_UTR | 20.0% |
| !! | TGAATAAGATGTTATAGAAA+TGG | + | chr2_4:22188885-22188904 | None:intergenic | 20.0% |
| !!! | GAATTTTTTTACTTGTGATT+TGG | - | chr2_4:22189274-22189293 | Msa0321110:CDS | 20.0% |
| !! | AAAATCAATCCTTACAAAAT+GGG | + | chr2_4:22189430-22189449 | None:intergenic | 20.0% |
| !! | AAAAATCAATCCTTACAAAA+TGG | + | chr2_4:22189431-22189450 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTATGGATTGAAT+TGG | - | chr2_4:22189478-22189497 | Msa0321110:CDS | 20.0% |
| !!! | TTTTTGTTATGGATTGAATT+GGG | - | chr2_4:22189479-22189498 | Msa0321110:CDS | 20.0% |
| !! | AATTCATATACACCATTAAT+TGG | + | chr2_4:22190341-22190360 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTATTGGTGTTTT+TGG | - | chr2_4:22190367-22190386 | Msa0321110:CDS | 20.0% |
| !!! | TTTGTTTTATTGGTGTTTTT+GGG | - | chr2_4:22190368-22190387 | Msa0321110:CDS | 20.0% |
| !!! | GTTTCTAAAGAGTATTATTA+TGG | - | chr2_4:22190400-22190419 | Msa0321110:intron | 20.0% |
| !!! | AAAATTGAAAGAGCATTAAT+TGG | + | chr2_4:22190627-22190646 | None:intergenic | 20.0% |
| !!! | AGATAGTTAAACTTTAGAAT+TGG | - | chr2_4:22190649-22190668 | Msa0321110:CDS | 20.0% |
| !! | TAAAGAAAATTTAGATTAGG+AGG | - | chr2_4:22190848-22190867 | Msa0321110:five_prime_UTR | 20.0% |
| !!! | GAATTTGATTTTGATTTGTG+AGG | + | chr2_4:22188938-22188957 | None:intergenic | 25.0% |
| ! | ATCGATCAATGTAATAGAAA+TGG | + | chr2_4:22188971-22188990 | None:intergenic | 25.0% |
| ! | GATGAAATATAATCAATGGT+GGG | + | chr2_4:22189172-22189191 | None:intergenic | 25.0% |
| ! | AGATGAAATATAATCAATGG+TGG | + | chr2_4:22189173-22189192 | None:intergenic | 25.0% |
| ! | GTCAGATGAAATATAATCAA+TGG | + | chr2_4:22189176-22189195 | None:intergenic | 25.0% |
| ! | AAGATTTGGATTCAAAAAAC+TGG | - | chr2_4:22189338-22189357 | Msa0321110:intron | 25.0% |
| ! | AGATTTGGATTCAAAAAACT+GGG | - | chr2_4:22189339-22189358 | Msa0321110:intron | 25.0% |
| ! | ATGTGAAGTTTGTATGATTA+GGG | - | chr2_4:22189523-22189542 | Msa0321110:CDS | 25.0% |
| ! | TTTATGCAAAACCTCTATTA+TGG | - | chr2_4:22189595-22189614 | Msa0321110:CDS | 25.0% |
| !! | TCTGATATTTTCAATGCTTT+TGG | - | chr2_4:22189623-22189642 | Msa0321110:CDS | 25.0% |
| ! | ACTCCATTTGAATTATGATA+TGG | - | chr2_4:22190271-22190290 | Msa0321110:intron | 25.0% |
| ! | GTACCATATCATAATTCAAA+TGG | + | chr2_4:22190277-22190296 | None:intergenic | 25.0% |
| ! | TTGAATTATGATATGGTACA+TGG | - | chr2_4:22190278-22190297 | Msa0321110:intron | 25.0% |
| ! | AACATATCACAACCAATTAA+TGG | - | chr2_4:22190326-22190345 | Msa0321110:CDS | 25.0% |
| !!! | TAGAAGTTTAGCTTTATTTG+TGG | - | chr2_4:22190704-22190723 | Msa0321110:exon | 25.0% |
| !!! | GAAATCTAATAATTTGCTGA+TGG | + | chr2_4:22190756-22190775 | None:intergenic | 25.0% |
| ! | TTGTAAATTCTTAATGAGAC+CGG | + | chr2_4:22190894-22190913 | None:intergenic | 25.0% |
| !!! | GAATTTGATTTTGATTTGTG+AGG | + | chr2_4:22188938-22188957 | None:intergenic | 25.0% |
| ! | ATCGATCAATGTAATAGAAA+TGG | + | chr2_4:22188971-22188990 | None:intergenic | 25.0% |
| ! | GATGAAATATAATCAATGGT+GGG | + | chr2_4:22189172-22189191 | None:intergenic | 25.0% |
| ! | AGATGAAATATAATCAATGG+TGG | + | chr2_4:22189173-22189192 | None:intergenic | 25.0% |
| ! | GTCAGATGAAATATAATCAA+TGG | + | chr2_4:22189176-22189195 | None:intergenic | 25.0% |
| ! | AAGATTTGGATTCAAAAAAC+TGG | - | chr2_4:22189338-22189357 | Msa0321110:intron | 25.0% |
| ! | AGATTTGGATTCAAAAAACT+GGG | - | chr2_4:22189339-22189358 | Msa0321110:intron | 25.0% |
| ! | ATGTGAAGTTTGTATGATTA+GGG | - | chr2_4:22189523-22189542 | Msa0321110:CDS | 25.0% |
| ! | TTTATGCAAAACCTCTATTA+TGG | - | chr2_4:22189595-22189614 | Msa0321110:CDS | 25.0% |
| !! | TCTGATATTTTCAATGCTTT+TGG | - | chr2_4:22189623-22189642 | Msa0321110:CDS | 25.0% |
| ! | ACTCCATTTGAATTATGATA+TGG | - | chr2_4:22190271-22190290 | Msa0321110:intron | 25.0% |
| ! | GTACCATATCATAATTCAAA+TGG | + | chr2_4:22190277-22190296 | None:intergenic | 25.0% |
| ! | TTGAATTATGATATGGTACA+TGG | - | chr2_4:22190278-22190297 | Msa0321110:intron | 25.0% |
| ! | AACATATCACAACCAATTAA+TGG | - | chr2_4:22190326-22190345 | Msa0321110:CDS | 25.0% |
| !!! | TAGAAGTTTAGCTTTATTTG+TGG | - | chr2_4:22190704-22190723 | Msa0321110:exon | 25.0% |
| !!! | GAAATCTAATAATTTGCTGA+TGG | + | chr2_4:22190756-22190775 | None:intergenic | 25.0% |
| ! | TTGTAAATTCTTAATGAGAC+CGG | + | chr2_4:22190894-22190913 | None:intergenic | 25.0% |
| TCTTTCTCAAACAACAACAA+TGG | - | chr2_4:22188997-22189016 | Msa0321110:three_prime_UTR | 30.0% | |
| !!! | TTGTTTTTTGGGTCTTTCTT+GGG | + | chr2_4:22189059-22189078 | None:intergenic | 30.0% |
| !!! | GCGATTTTAGGTTGTTTTTT+GGG | + | chr2_4:22189070-22189089 | None:intergenic | 30.0% |
| !!! | AGCGATTTTAGGTTGTTTTT+TGG | + | chr2_4:22189071-22189090 | None:intergenic | 30.0% |
| !! | TGGGATTTGATTTTCATCAT+TGG | + | chr2_4:22189143-22189162 | None:intergenic | 30.0% |
| TGATGAAAATCAAATCCCAT+TGG | - | chr2_4:22189144-22189163 | Msa0321110:CDS | 30.0% | |
| ! | CTTCTATTACCCATTTTGTA+AGG | - | chr2_4:22189418-22189437 | Msa0321110:intron | 30.0% |
| GATGTGAAGTTTGTATGATT+AGG | - | chr2_4:22189522-22189541 | Msa0321110:CDS | 30.0% | |
| GATTAGGGATAAAATTGTGT+TGG | - | chr2_4:22189538-22189557 | Msa0321110:CDS | 30.0% | |
| AAATTGAATCGAATTAGACC+TGG | - | chr2_4:22189870-22189889 | Msa0321110:intron | 30.0% | |
| ! | AATGTTGAATTGTGTTGTTC+TGG | - | chr2_4:22190027-22190046 | Msa0321110:intron | 30.0% |
| AATTGGTTGTGATATGTTGA+CGG | + | chr2_4:22190324-22190343 | None:intergenic | 30.0% | |
| AGAAAATTTAGATTAGGAGG+TGG | - | chr2_4:22190851-22190870 | Msa0321110:five_prime_UTR | 30.0% | |
| TCTTTCTCAAACAACAACAA+TGG | - | chr2_4:22188997-22189016 | Msa0321110:three_prime_UTR | 30.0% | |
| !!! | TTGTTTTTTGGGTCTTTCTT+GGG | + | chr2_4:22189059-22189078 | None:intergenic | 30.0% |
| !!! | GCGATTTTAGGTTGTTTTTT+GGG | + | chr2_4:22189070-22189089 | None:intergenic | 30.0% |
| !!! | AGCGATTTTAGGTTGTTTTT+TGG | + | chr2_4:22189071-22189090 | None:intergenic | 30.0% |
| !! | TGGGATTTGATTTTCATCAT+TGG | + | chr2_4:22189143-22189162 | None:intergenic | 30.0% |
| TGATGAAAATCAAATCCCAT+TGG | - | chr2_4:22189144-22189163 | Msa0321110:CDS | 30.0% | |
| ! | CTTCTATTACCCATTTTGTA+AGG | - | chr2_4:22189418-22189437 | Msa0321110:intron | 30.0% |
| GATGTGAAGTTTGTATGATT+AGG | - | chr2_4:22189522-22189541 | Msa0321110:CDS | 30.0% | |
| GATTAGGGATAAAATTGTGT+TGG | - | chr2_4:22189538-22189557 | Msa0321110:CDS | 30.0% | |
| AAATTGAATCGAATTAGACC+TGG | - | chr2_4:22189870-22189889 | Msa0321110:intron | 30.0% | |
| ! | AATGTTGAATTGTGTTGTTC+TGG | - | chr2_4:22190027-22190046 | Msa0321110:intron | 30.0% |
| AATTGGTTGTGATATGTTGA+CGG | + | chr2_4:22190324-22190343 | None:intergenic | 30.0% | |
| AGAAAATTTAGATTAGGAGG+TGG | - | chr2_4:22190851-22190870 | Msa0321110:five_prime_UTR | 30.0% | |
| TAACGGTAACATACAGGAAT+GGG | + | chr2_4:22188844-22188863 | None:intergenic | 35.0% | |
| !!! | GTTGTTTTTTGGGTCTTTCT+TGG | + | chr2_4:22189060-22189079 | None:intergenic | 35.0% |
| GCAGAGTTTGATTGAAGATT+TGG | - | chr2_4:22189324-22189343 | Msa0321110:intron | 35.0% | |
| ! | GTTATGGATTGAATTGGGTT+TGG | - | chr2_4:22189484-22189503 | Msa0321110:CDS | 35.0% |
| TAGGGATAAAATTGTGTTGG+TGG | - | chr2_4:22189541-22189560 | Msa0321110:CDS | 35.0% | |
| !! | TTTTGCATAAAGCACTACGA+GGG | + | chr2_4:22189586-22189605 | None:intergenic | 35.0% |
| CATTATTTCGATGTCTGGTT+AGG | - | chr2_4:22189973-22189992 | Msa0321110:intron | 35.0% | |
| TTCCATTGCTTCAGAAACTA+AGG | - | chr2_4:22190161-22190180 | Msa0321110:CDS | 35.0% | |
| !! | AACCTTAGTTTCTGAAGCAA+TGG | + | chr2_4:22190166-22190185 | None:intergenic | 35.0% |
| TCACAAAAACCTTAGGATCA+GGG | - | chr2_4:22190195-22190214 | Msa0321110:intron | 35.0% | |
| ATCCAAATGTGTCTCCAAAA+TGG | - | chr2_4:22190237-22190256 | Msa0321110:intron | 35.0% | |
| !! | TACCATTTTGGAGACACATT+TGG | + | chr2_4:22190242-22190261 | None:intergenic | 35.0% |
| GTCTCCAAAATGGTAAAGTT+TGG | - | chr2_4:22190247-22190266 | Msa0321110:intron | 35.0% | |
| ! | AGTGCCAAACTTTACCATTT+TGG | + | chr2_4:22190254-22190273 | None:intergenic | 35.0% |
| TATGATATGGTACATGGTCT+AGG | - | chr2_4:22190284-22190303 | Msa0321110:intron | 35.0% | |
| !! | AAGAGTATTATTATGGCAGC+AGG | - | chr2_4:22190407-22190426 | Msa0321110:intron | 35.0% |
| ! | AGAGTATTATTATGGCAGCA+GGG | - | chr2_4:22190408-22190427 | Msa0321110:intron | 35.0% |
| TATTGCAACTTCAGTGTATG+AGG | - | chr2_4:22190530-22190549 | Msa0321110:CDS | 35.0% | |
| AGTGTATGAGGCAATCATTA+AGG | - | chr2_4:22190542-22190561 | Msa0321110:CDS | 35.0% | |
| AATCATTAAGGATGTGGAAG+AGG | - | chr2_4:22190554-22190573 | Msa0321110:CDS | 35.0% | |
| !! | TAATTGGTGTTAGCTTAGAG+TGG | + | chr2_4:22190611-22190630 | None:intergenic | 35.0% |
| AATTTAGATTAGGAGGTGGA+AGG | - | chr2_4:22190855-22190874 | Msa0321110:five_prime_UTR | 35.0% | |
| TAAATTCTTAATGAGACCGG+CGG | + | chr2_4:22190891-22190910 | None:intergenic | 35.0% | |
| TAACGGTAACATACAGGAAT+GGG | + | chr2_4:22188844-22188863 | None:intergenic | 35.0% | |
| !!! | GTTGTTTTTTGGGTCTTTCT+TGG | + | chr2_4:22189060-22189079 | None:intergenic | 35.0% |
| GCAGAGTTTGATTGAAGATT+TGG | - | chr2_4:22189324-22189343 | Msa0321110:intron | 35.0% | |
| ! | GTTATGGATTGAATTGGGTT+TGG | - | chr2_4:22189484-22189503 | Msa0321110:CDS | 35.0% |
| TAGGGATAAAATTGTGTTGG+TGG | - | chr2_4:22189541-22189560 | Msa0321110:CDS | 35.0% | |
| !! | TTTTGCATAAAGCACTACGA+GGG | + | chr2_4:22189586-22189605 | None:intergenic | 35.0% |
| CATTATTTCGATGTCTGGTT+AGG | - | chr2_4:22189973-22189992 | Msa0321110:intron | 35.0% | |
| TTCCATTGCTTCAGAAACTA+AGG | - | chr2_4:22190161-22190180 | Msa0321110:CDS | 35.0% | |
| !! | AACCTTAGTTTCTGAAGCAA+TGG | + | chr2_4:22190166-22190185 | None:intergenic | 35.0% |
| TCACAAAAACCTTAGGATCA+GGG | - | chr2_4:22190195-22190214 | Msa0321110:intron | 35.0% | |
| ATCCAAATGTGTCTCCAAAA+TGG | - | chr2_4:22190237-22190256 | Msa0321110:intron | 35.0% | |
| !! | TACCATTTTGGAGACACATT+TGG | + | chr2_4:22190242-22190261 | None:intergenic | 35.0% |
| GTCTCCAAAATGGTAAAGTT+TGG | - | chr2_4:22190247-22190266 | Msa0321110:intron | 35.0% | |
| ! | AGTGCCAAACTTTACCATTT+TGG | + | chr2_4:22190254-22190273 | None:intergenic | 35.0% |
| TATGATATGGTACATGGTCT+AGG | - | chr2_4:22190284-22190303 | Msa0321110:intron | 35.0% | |
| !! | AAGAGTATTATTATGGCAGC+AGG | - | chr2_4:22190407-22190426 | Msa0321110:intron | 35.0% |
| ! | AGAGTATTATTATGGCAGCA+GGG | - | chr2_4:22190408-22190427 | Msa0321110:intron | 35.0% |
| TATTGCAACTTCAGTGTATG+AGG | - | chr2_4:22190530-22190549 | Msa0321110:CDS | 35.0% | |
| AGTGTATGAGGCAATCATTA+AGG | - | chr2_4:22190542-22190561 | Msa0321110:CDS | 35.0% | |
| AATCATTAAGGATGTGGAAG+AGG | - | chr2_4:22190554-22190573 | Msa0321110:CDS | 35.0% | |
| !! | TAATTGGTGTTAGCTTAGAG+TGG | + | chr2_4:22190611-22190630 | None:intergenic | 35.0% |
| AATTTAGATTAGGAGGTGGA+AGG | - | chr2_4:22190855-22190874 | Msa0321110:five_prime_UTR | 35.0% | |
| TAAATTCTTAATGAGACCGG+CGG | + | chr2_4:22190891-22190910 | None:intergenic | 35.0% | |
| GTAACGGTAACATACAGGAA+TGG | + | chr2_4:22188845-22188864 | None:intergenic | 40.0% | |
| AAGAGACGTTAGTGGTGTAA+CGG | + | chr2_4:22188861-22188880 | None:intergenic | 40.0% | |
| GAAATGGAAAGAGACGTTAG+TGG | + | chr2_4:22188869-22188888 | None:intergenic | 40.0% | |
| !! | GTTGGAAGAGCATTGTCAAT+AGG | + | chr2_4:22189031-22189050 | None:intergenic | 40.0% |
| TTTGGGTCTTTCTTGGGTTA+TGG | + | chr2_4:22189053-22189072 | None:intergenic | 40.0% | |
| ! | TCATCATTGGAAGAAGTACG+AGG | + | chr2_4:22189130-22189149 | None:intergenic | 40.0% |
| !! | AATCAATGGTGGGTTCCAAT+GGG | + | chr2_4:22189162-22189181 | None:intergenic | 40.0% |
| !! | TAATCAATGGTGGGTTCCAA+TGG | + | chr2_4:22189163-22189182 | None:intergenic | 40.0% |
| CTTACTTGAATCTGAGCTTC+AGG | + | chr2_4:22189220-22189239 | None:intergenic | 40.0% | |
| GGATTCAAAAAACTGGGTCA+AGG | - | chr2_4:22189345-22189364 | Msa0321110:intron | 40.0% | |
| AAATCGCCTAACATCGTTCA+AGG | + | chr2_4:22189380-22189399 | None:intergenic | 40.0% | |
| ! | GGATAAAATTGTGTTGGTGG+TGG | - | chr2_4:22189544-22189563 | Msa0321110:CDS | 40.0% |
| !! | GTTTTGCATAAAGCACTACG+AGG | + | chr2_4:22189587-22189606 | None:intergenic | 40.0% |
| ATCAGAAGCAGCCATAATAG+AGG | + | chr2_4:22189609-22189628 | None:intergenic | 40.0% | |
| GTTTGATCCTTCCATTTCTG+AGG | - | chr2_4:22189655-22189674 | Msa0321110:intron | 40.0% | |
| TCAAATGCCTCAGAAATGGA+AGG | + | chr2_4:22189665-22189684 | None:intergenic | 40.0% | |
| !! | TCCATTTCTGAGGCATTTGA+TGG | - | chr2_4:22189665-22189684 | Msa0321110:intron | 40.0% |
| AAATTGAACCGAACTAGACC+TGG | - | chr2_4:22189739-22189758 | Msa0321110:intron | 40.0% | |
| ! | GTCCTGATTTGAGCTGTTTA+AGG | - | chr2_4:22189797-22189816 | Msa0321110:intron | 40.0% |
| ! | CTGATTTGAGCTGTTTAAGG+CGG | - | chr2_4:22189800-22189819 | Msa0321110:intron | 40.0% |
| ! | TGATTTGAGCTGTTTAAGGC+GGG | - | chr2_4:22189801-22189820 | Msa0321110:intron | 40.0% |
| GACCTGGTTGAACCTTTAAT+CGG | - | chr2_4:22189886-22189905 | Msa0321110:intron | 40.0% | |
| TGATTGAGCTGTCCGATTAA+AGG | + | chr2_4:22189901-22189920 | None:intergenic | 40.0% | |
| GGTCTCATTATTTCGATGTC+TGG | - | chr2_4:22189968-22189987 | Msa0321110:intron | 40.0% | |
| TTGTGTGTGAAGAAGCTGAT+AGG | - | chr2_4:22190104-22190123 | Msa0321110:CDS | 40.0% | |
| TGTGTGTGAAGAAGCTGATA+GGG | - | chr2_4:22190105-22190124 | Msa0321110:CDS | 40.0% | |
| !! | AGTTTCTGAAGCAATGGAAG+AGG | + | chr2_4:22190160-22190179 | None:intergenic | 40.0% |
| CTGTGAGTCACAAAAACCTT+AGG | - | chr2_4:22190188-22190207 | Msa0321110:intron | 40.0% | |
| GTCACAAAAACCTTAGGATC+AGG | - | chr2_4:22190194-22190213 | Msa0321110:intron | 40.0% | |
| ATTGAGGAAATGGAGGAGTT+TGG | - | chr2_4:22190432-22190451 | Msa0321110:intron | 40.0% | |
| TTGAGGAAATGGAGGAGTTT+GGG | - | chr2_4:22190433-22190452 | Msa0321110:intron | 40.0% | |
| TGAGGCAATCATTAAGGATG+TGG | - | chr2_4:22190548-22190567 | Msa0321110:CDS | 40.0% | |
| TGTACGTTTGCTCATACTTG+AGG | - | chr2_4:22190675-22190694 | Msa0321110:CDS | 40.0% | |
| TTTATTTGTGGCAGTGCTCA+TGG | - | chr2_4:22190716-22190735 | Msa0321110:exon | 40.0% | |
| GTAACGGTAACATACAGGAA+TGG | + | chr2_4:22188845-22188864 | None:intergenic | 40.0% | |
| AAGAGACGTTAGTGGTGTAA+CGG | + | chr2_4:22188861-22188880 | None:intergenic | 40.0% | |
| GAAATGGAAAGAGACGTTAG+TGG | + | chr2_4:22188869-22188888 | None:intergenic | 40.0% | |
| !! | GTTGGAAGAGCATTGTCAAT+AGG | + | chr2_4:22189031-22189050 | None:intergenic | 40.0% |
| TTTGGGTCTTTCTTGGGTTA+TGG | + | chr2_4:22189053-22189072 | None:intergenic | 40.0% | |
| ! | TCATCATTGGAAGAAGTACG+AGG | + | chr2_4:22189130-22189149 | None:intergenic | 40.0% |
| !! | AATCAATGGTGGGTTCCAAT+GGG | + | chr2_4:22189162-22189181 | None:intergenic | 40.0% |
| !! | TAATCAATGGTGGGTTCCAA+TGG | + | chr2_4:22189163-22189182 | None:intergenic | 40.0% |
| CTTACTTGAATCTGAGCTTC+AGG | + | chr2_4:22189220-22189239 | None:intergenic | 40.0% | |
| GGATTCAAAAAACTGGGTCA+AGG | - | chr2_4:22189345-22189364 | Msa0321110:intron | 40.0% | |
| AAATCGCCTAACATCGTTCA+AGG | + | chr2_4:22189380-22189399 | None:intergenic | 40.0% | |
| ! | GGATAAAATTGTGTTGGTGG+TGG | - | chr2_4:22189544-22189563 | Msa0321110:CDS | 40.0% |
| !! | GTTTTGCATAAAGCACTACG+AGG | + | chr2_4:22189587-22189606 | None:intergenic | 40.0% |
| ATCAGAAGCAGCCATAATAG+AGG | + | chr2_4:22189609-22189628 | None:intergenic | 40.0% | |
| GTTTGATCCTTCCATTTCTG+AGG | - | chr2_4:22189655-22189674 | Msa0321110:intron | 40.0% | |
| TCAAATGCCTCAGAAATGGA+AGG | + | chr2_4:22189665-22189684 | None:intergenic | 40.0% | |
| !! | TCCATTTCTGAGGCATTTGA+TGG | - | chr2_4:22189665-22189684 | Msa0321110:intron | 40.0% |
| AAATTGAACCGAACTAGACC+TGG | - | chr2_4:22189739-22189758 | Msa0321110:intron | 40.0% | |
| ! | GTCCTGATTTGAGCTGTTTA+AGG | - | chr2_4:22189797-22189816 | Msa0321110:intron | 40.0% |
| ! | CTGATTTGAGCTGTTTAAGG+CGG | - | chr2_4:22189800-22189819 | Msa0321110:intron | 40.0% |
| ! | TGATTTGAGCTGTTTAAGGC+GGG | - | chr2_4:22189801-22189820 | Msa0321110:intron | 40.0% |
| GACCTGGTTGAACCTTTAAT+CGG | - | chr2_4:22189886-22189905 | Msa0321110:intron | 40.0% | |
| TGATTGAGCTGTCCGATTAA+AGG | + | chr2_4:22189901-22189920 | None:intergenic | 40.0% | |
| GGTCTCATTATTTCGATGTC+TGG | - | chr2_4:22189968-22189987 | Msa0321110:intron | 40.0% | |
| TTGTGTGTGAAGAAGCTGAT+AGG | - | chr2_4:22190104-22190123 | Msa0321110:CDS | 40.0% | |
| TGTGTGTGAAGAAGCTGATA+GGG | - | chr2_4:22190105-22190124 | Msa0321110:CDS | 40.0% | |
| !! | AGTTTCTGAAGCAATGGAAG+AGG | + | chr2_4:22190160-22190179 | None:intergenic | 40.0% |
| CTGTGAGTCACAAAAACCTT+AGG | - | chr2_4:22190188-22190207 | Msa0321110:intron | 40.0% | |
| GTCACAAAAACCTTAGGATC+AGG | - | chr2_4:22190194-22190213 | Msa0321110:intron | 40.0% | |
| ATTGAGGAAATGGAGGAGTT+TGG | - | chr2_4:22190432-22190451 | Msa0321110:intron | 40.0% | |
| TTGAGGAAATGGAGGAGTTT+GGG | - | chr2_4:22190433-22190452 | Msa0321110:intron | 40.0% | |
| TGAGGCAATCATTAAGGATG+TGG | - | chr2_4:22190548-22190567 | Msa0321110:CDS | 40.0% | |
| TGTACGTTTGCTCATACTTG+AGG | - | chr2_4:22190675-22190694 | Msa0321110:CDS | 40.0% | |
| TTTATTTGTGGCAGTGCTCA+TGG | - | chr2_4:22190716-22190735 | Msa0321110:exon | 40.0% | |
| GTGGTGTAACGGTAACATAC+AGG | + | chr2_4:22188850-22188869 | None:intergenic | 45.0% | |
| GGTCTTTCTTGGGTTATGGT+TGG | + | chr2_4:22189049-22189068 | None:intergenic | 45.0% | |
| TGAGCTTCAGGATCTGACAT+GGG | + | chr2_4:22189208-22189227 | None:intergenic | 45.0% | |
| GTGAGTCCTTGAACGATGTT+AGG | - | chr2_4:22189371-22189390 | Msa0321110:intron | 45.0% | |
| !! | AATTGTGTTGGTGGTGGTGA+AGG | - | chr2_4:22189550-22189569 | Msa0321110:CDS | 45.0% |
| GCCATCAAATGCCTCAGAAA+TGG | + | chr2_4:22189669-22189688 | None:intergenic | 45.0% | |
| !! | TTCTGAGGCATTTGATGGCT+TGG | - | chr2_4:22189670-22189689 | Msa0321110:intron | 45.0% |
| AGGTTCAACCAGGTCTAGTT+CGG | + | chr2_4:22189750-22189769 | None:intergenic | 45.0% | |
| GACCTGGTTGAACCTTAAAC+CGG | - | chr2_4:22189755-22189774 | Msa0321110:intron | 45.0% | |
| AAAATCGTGATCGAGCTGTC+CGG | + | chr2_4:22189777-22189796 | None:intergenic | 45.0% | |
| CGCCTTAAACAGCTCAAATC+AGG | + | chr2_4:22189802-22189821 | None:intergenic | 45.0% | |
| GTCCGATTAAAGGTTCAACC+AGG | + | chr2_4:22189891-22189910 | None:intergenic | 45.0% | |
| ! | GTCCTGATTCGAGCTGTTTA+AGG | - | chr2_4:22189928-22189947 | Msa0321110:intron | 45.0% |
| ! | CTGATTCGAGCTGTTTAAGG+CGG | - | chr2_4:22189931-22189950 | Msa0321110:intron | 45.0% |
| ! | TGATTCGAGCTGTTTAAGGC+GGG | - | chr2_4:22189932-22189951 | Msa0321110:intron | 45.0% |
| ! | TGATAGGGCACTTGGATCAA+TGG | - | chr2_4:22190120-22190139 | Msa0321110:CDS | 45.0% |
| !! | AAGCAATGGAAGAGGTGTCA+TGG | + | chr2_4:22190152-22190171 | None:intergenic | 45.0% |
| ATTATGGCAGCAGGGAATTG+AGG | - | chr2_4:22190416-22190435 | Msa0321110:intron | 45.0% | |
| AGTGAATGATAGACTCCCAG+AGG | - | chr2_4:22190488-22190507 | Msa0321110:intron | 45.0% | |
| TGTGGAAGAGGAACAGAAGA+TGG | - | chr2_4:22190566-22190585 | Msa0321110:CDS | 45.0% | |
| AGGAACAGAAGATGGAAGTG+TGG | - | chr2_4:22190574-22190593 | Msa0321110:CDS | 45.0% | |
| GTGGTGTAACGGTAACATAC+AGG | + | chr2_4:22188850-22188869 | None:intergenic | 45.0% | |
| GGTCTTTCTTGGGTTATGGT+TGG | + | chr2_4:22189049-22189068 | None:intergenic | 45.0% | |
| TGAGCTTCAGGATCTGACAT+GGG | + | chr2_4:22189208-22189227 | None:intergenic | 45.0% | |
| GTGAGTCCTTGAACGATGTT+AGG | - | chr2_4:22189371-22189390 | Msa0321110:intron | 45.0% | |
| !! | AATTGTGTTGGTGGTGGTGA+AGG | - | chr2_4:22189550-22189569 | Msa0321110:CDS | 45.0% |
| GCCATCAAATGCCTCAGAAA+TGG | + | chr2_4:22189669-22189688 | None:intergenic | 45.0% | |
| !! | TTCTGAGGCATTTGATGGCT+TGG | - | chr2_4:22189670-22189689 | Msa0321110:intron | 45.0% |
| AGGTTCAACCAGGTCTAGTT+CGG | + | chr2_4:22189750-22189769 | None:intergenic | 45.0% | |
| GACCTGGTTGAACCTTAAAC+CGG | - | chr2_4:22189755-22189774 | Msa0321110:intron | 45.0% | |
| AAAATCGTGATCGAGCTGTC+CGG | + | chr2_4:22189777-22189796 | None:intergenic | 45.0% | |
| CGCCTTAAACAGCTCAAATC+AGG | + | chr2_4:22189802-22189821 | None:intergenic | 45.0% | |
| GTCCGATTAAAGGTTCAACC+AGG | + | chr2_4:22189891-22189910 | None:intergenic | 45.0% | |
| ! | GTCCTGATTCGAGCTGTTTA+AGG | - | chr2_4:22189928-22189947 | Msa0321110:intron | 45.0% |
| ! | CTGATTCGAGCTGTTTAAGG+CGG | - | chr2_4:22189931-22189950 | Msa0321110:intron | 45.0% |
| ! | TGATTCGAGCTGTTTAAGGC+GGG | - | chr2_4:22189932-22189951 | Msa0321110:intron | 45.0% |
| ! | TGATAGGGCACTTGGATCAA+TGG | - | chr2_4:22190120-22190139 | Msa0321110:CDS | 45.0% |
| !! | AAGCAATGGAAGAGGTGTCA+TGG | + | chr2_4:22190152-22190171 | None:intergenic | 45.0% |
| ATTATGGCAGCAGGGAATTG+AGG | - | chr2_4:22190416-22190435 | Msa0321110:intron | 45.0% | |
| AGTGAATGATAGACTCCCAG+AGG | - | chr2_4:22190488-22190507 | Msa0321110:intron | 45.0% | |
| TGTGGAAGAGGAACAGAAGA+TGG | - | chr2_4:22190566-22190585 | Msa0321110:CDS | 45.0% | |
| AGGAACAGAAGATGGAAGTG+TGG | - | chr2_4:22190574-22190593 | Msa0321110:CDS | 45.0% | |
| !! | TTTATAATTATAAATAACAA+CGG | - | chr2_4:22190814-22190833 | Msa0321110:five_prime_UTR | 5.0% |
| !! | TTTATAATTATAAATAACAA+CGG | - | chr2_4:22190814-22190833 | Msa0321110:five_prime_UTR | 5.0% |
| !! | ATACAGGAATGGGCTGGAAG+GGG | + | chr2_4:22188834-22188853 | None:intergenic | 50.0% |
| !! | CATACAGGAATGGGCTGGAA+GGG | + | chr2_4:22188835-22188854 | None:intergenic | 50.0% |
| !! | ACATACAGGAATGGGCTGGA+AGG | + | chr2_4:22188836-22188855 | None:intergenic | 50.0% |
| GGTAACATACAGGAATGGGC+TGG | + | chr2_4:22188840-22188859 | None:intergenic | 50.0% | |
| ! | GGGGTTGAGACAGCGATTTT+AGG | + | chr2_4:22189082-22189101 | None:intergenic | 50.0% |
| !! | CTGTTGCTGCTGTGGTTTTG+GGG | + | chr2_4:22189101-22189120 | None:intergenic | 50.0% |
| ! | GCTGTTGCTGCTGTGGTTTT+GGG | + | chr2_4:22189102-22189121 | None:intergenic | 50.0% |
| ! | TGCTGTTGCTGCTGTGGTTT+TGG | + | chr2_4:22189103-22189122 | None:intergenic | 50.0% |
| CAGGATCTGACATGGGTTTC+AGG | + | chr2_4:22189201-22189220 | None:intergenic | 50.0% | |
| CTGAGCTTCAGGATCTGACA+TGG | + | chr2_4:22189209-22189228 | None:intergenic | 50.0% | |
| ! | GTCCGGTTTAAGGTTCAACC+AGG | + | chr2_4:22189760-22189779 | None:intergenic | 50.0% |
| TGATCGAGCTGTCCGGTTTA+AGG | + | chr2_4:22189770-22189789 | None:intergenic | 50.0% | |
| AAGGCGGGTGAATGACTATG+AGG | - | chr2_4:22189816-22189835 | Msa0321110:intron | 50.0% | |
| CGCCTTAAACAGCTCGAATC+AGG | + | chr2_4:22189933-22189952 | None:intergenic | 50.0% | |
| ! | TTTAAGGCGGGTGAACGACT+AGG | - | chr2_4:22189944-22189963 | Msa0321110:intron | 50.0% |
| GCTGCTGCTGAAATCTTCTC+AGG | - | chr2_4:22190072-22190091 | Msa0321110:CDS | 50.0% | |
| ! | GAAGAAGCTGATAGGGCACT+TGG | - | chr2_4:22190112-22190131 | Msa0321110:CDS | 50.0% |
| ! | TAGGGCACTTGGATCAATGG+TGG | - | chr2_4:22190123-22190142 | Msa0321110:CDS | 50.0% |
| ! | AGGGCACTTGGATCAATGGT+GGG | - | chr2_4:22190124-22190143 | Msa0321110:CDS | 50.0% |
| ! | CAGCTTTAGCCCTGATCCTA+AGG | + | chr2_4:22190207-22190226 | None:intergenic | 50.0% |
| GCAGCAGGGAATTGAGGAAA+TGG | - | chr2_4:22190422-22190441 | Msa0321110:intron | 50.0% | |
| GCAGGGAATTGAGGAAATGG+AGG | - | chr2_4:22190425-22190444 | Msa0321110:intron | 50.0% | |
| GGAAATGGAGGAGTTTGGGA+TGG | - | chr2_4:22190437-22190456 | Msa0321110:intron | 50.0% | |
| TTGCTGCATCTCTTGCCTCT+GGG | + | chr2_4:22190506-22190525 | None:intergenic | 50.0% | |
| !! | ATACAGGAATGGGCTGGAAG+GGG | + | chr2_4:22188834-22188853 | None:intergenic | 50.0% |
| !! | CATACAGGAATGGGCTGGAA+GGG | + | chr2_4:22188835-22188854 | None:intergenic | 50.0% |
| !! | ACATACAGGAATGGGCTGGA+AGG | + | chr2_4:22188836-22188855 | None:intergenic | 50.0% |
| GGTAACATACAGGAATGGGC+TGG | + | chr2_4:22188840-22188859 | None:intergenic | 50.0% | |
| ! | GGGGTTGAGACAGCGATTTT+AGG | + | chr2_4:22189082-22189101 | None:intergenic | 50.0% |
| !! | CTGTTGCTGCTGTGGTTTTG+GGG | + | chr2_4:22189101-22189120 | None:intergenic | 50.0% |
| ! | GCTGTTGCTGCTGTGGTTTT+GGG | + | chr2_4:22189102-22189121 | None:intergenic | 50.0% |
| ! | TGCTGTTGCTGCTGTGGTTT+TGG | + | chr2_4:22189103-22189122 | None:intergenic | 50.0% |
| CAGGATCTGACATGGGTTTC+AGG | + | chr2_4:22189201-22189220 | None:intergenic | 50.0% | |
| CTGAGCTTCAGGATCTGACA+TGG | + | chr2_4:22189209-22189228 | None:intergenic | 50.0% | |
| ! | GTCCGGTTTAAGGTTCAACC+AGG | + | chr2_4:22189760-22189779 | None:intergenic | 50.0% |
| TGATCGAGCTGTCCGGTTTA+AGG | + | chr2_4:22189770-22189789 | None:intergenic | 50.0% | |
| AAGGCGGGTGAATGACTATG+AGG | - | chr2_4:22189816-22189835 | Msa0321110:intron | 50.0% | |
| CGCCTTAAACAGCTCGAATC+AGG | + | chr2_4:22189933-22189952 | None:intergenic | 50.0% | |
| ! | TTTAAGGCGGGTGAACGACT+AGG | - | chr2_4:22189944-22189963 | Msa0321110:intron | 50.0% |
| GCTGCTGCTGAAATCTTCTC+AGG | - | chr2_4:22190072-22190091 | Msa0321110:CDS | 50.0% | |
| ! | GAAGAAGCTGATAGGGCACT+TGG | - | chr2_4:22190112-22190131 | Msa0321110:CDS | 50.0% |
| ! | TAGGGCACTTGGATCAATGG+TGG | - | chr2_4:22190123-22190142 | Msa0321110:CDS | 50.0% |
| ! | AGGGCACTTGGATCAATGGT+GGG | - | chr2_4:22190124-22190143 | Msa0321110:CDS | 50.0% |
| ! | CAGCTTTAGCCCTGATCCTA+AGG | + | chr2_4:22190207-22190226 | None:intergenic | 50.0% |
| GCAGCAGGGAATTGAGGAAA+TGG | - | chr2_4:22190422-22190441 | Msa0321110:intron | 50.0% | |
| GCAGGGAATTGAGGAAATGG+AGG | - | chr2_4:22190425-22190444 | Msa0321110:intron | 50.0% | |
| GGAAATGGAGGAGTTTGGGA+TGG | - | chr2_4:22190437-22190456 | Msa0321110:intron | 50.0% | |
| TTGCTGCATCTCTTGCCTCT+GGG | + | chr2_4:22190506-22190525 | None:intergenic | 50.0% | |
| ! | GGTTGTTGCTGTTGCTGCTG+TGG | + | chr2_4:22189109-22189128 | None:intergenic | 55.0% |
| CTTGCTGCATCTCTTGCCTC+TGG | + | chr2_4:22190507-22190526 | None:intergenic | 55.0% | |
| GGAAGGTTAGAGAAAGCCGC+CGG | - | chr2_4:22190872-22190891 | Msa0321110:five_prime_UTR | 55.0% | |
| ! | GGTTGTTGCTGTTGCTGCTG+TGG | + | chr2_4:22189109-22189128 | None:intergenic | 55.0% |
| CTTGCTGCATCTCTTGCCTC+TGG | + | chr2_4:22190507-22190526 | None:intergenic | 55.0% | |
| GGAAGGTTAGAGAAAGCCGC+CGG | - | chr2_4:22190872-22190891 | Msa0321110:five_prime_UTR | 55.0% | |
| AAGGCGGGTGAACGACTAGG+AGG | - | chr2_4:22189947-22189966 | Msa0321110:intron | 60.0% | |
| AAGGCGGGTGAACGACTAGG+AGG | - | chr2_4:22189947-22189966 | Msa0321110:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 22188806 | 22190926 | 22188806 | ID=Msa0321110;Name=Msa0321110 |
| chr2_4 | mRNA | 22188806 | 22190926 | 22188806 | ID=Msa0321110-mRNA-1;Parent=Msa0321110;Name=Msa0321110-mRNA-1;_AED=0.18;_eAED=0.18;_QI=210|1|1|1|1|1|5|261|301 |
| chr2_4 | exon | 22188806 | 22189303 | 22188806 | ID=Msa0321110-mRNA-1:exon:8183;Parent=Msa0321110-mRNA-1 |
| chr2_4 | exon | 22189474 | 22189668 | 22189474 | ID=Msa0321110-mRNA-1:exon:8182;Parent=Msa0321110-mRNA-1 |
| chr2_4 | exon | 22190041 | 22190188 | 22190041 | ID=Msa0321110-mRNA-1:exon:8181;Parent=Msa0321110-mRNA-1 |
| chr2_4 | exon | 22190298 | 22190404 | 22190298 | ID=Msa0321110-mRNA-1:exon:8180;Parent=Msa0321110-mRNA-1 |
| chr2_4 | exon | 22190498 | 22190926 | 22190498 | ID=Msa0321110-mRNA-1:exon:8179;Parent=Msa0321110-mRNA-1 |
| chr2_4 | five_prime_UTR | 22190717 | 22190926 | 22190717 | ID=Msa0321110-mRNA-1:five_prime_utr;Parent=Msa0321110-mRNA-1 |
| chr2_4 | CDS | 22190498 | 22190716 | 22190498 | ID=Msa0321110-mRNA-1:cds;Parent=Msa0321110-mRNA-1 |
| chr2_4 | CDS | 22190298 | 22190404 | 22190298 | ID=Msa0321110-mRNA-1:cds;Parent=Msa0321110-mRNA-1 |
| chr2_4 | CDS | 22190041 | 22190188 | 22190041 | ID=Msa0321110-mRNA-1:cds;Parent=Msa0321110-mRNA-1 |
| chr2_4 | CDS | 22189474 | 22189668 | 22189474 | ID=Msa0321110-mRNA-1:cds;Parent=Msa0321110-mRNA-1 |
| chr2_4 | CDS | 22189067 | 22189303 | 22189067 | ID=Msa0321110-mRNA-1:cds;Parent=Msa0321110-mRNA-1 |
| chr2_4 | three_prime_UTR | 22188806 | 22189066 | 22188806 | ID=Msa0321110-mRNA-1:three_prime_utr;Parent=Msa0321110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
