AlfalfaGEDB | Msa0279180

M. sativa cultivar zhongmu-4 / Msa0279180

KEGG: -
GO: -
PFAM: PF12348.11

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0279180	XP_013463249.1	96.013	301	5	1	1	301	1	294	0.0	572

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0279180	sp\|Q6A070\|TGRM1_MOUSE	27.861	201	136	3	62	258	1252	1447	4.48e-14	76.3

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0032980	Msa0279180	0.809934	1.480027e-50	-8.615850e-47
Msa0062340	Msa0279180	0.820937	5.267510e-53	-8.615850e-47
Msa0074360	Msa0279180	0.801690	7.995592e-49	-8.615850e-47
Msa0075530	Msa0279180	0.814744	1.317952e-51	-8.615850e-47
Msa0094790	Msa0279180	0.804038	2.617295e-49	-8.615850e-47
Msa0140380	Msa0279180	0.806540	7.829263e-50	-8.615850e-47
Msa0159590	Msa0279180	0.812008	5.261924e-51	-8.615850e-47
Msa0168050	Msa0279180	0.811812	5.804653e-51	-8.615850e-47
Msa0190730	Msa0279180	0.807675	4.502583e-50	-8.615850e-47
Msa0219560	Msa0279180	0.974108	1.405707e-137	-8.615850e-47
Msa0239390	Msa0279180	0.932348	9.750896e-95	-8.615850e-47
Msa0269210	Msa0279180	0.802724	4.898597e-49	-8.615850e-47
Msa0279180	Msa0321110	0.975983	5.787730e-141	-8.615850e-47
Msa0279180	Msa0343010	0.819771	9.748434e-53	-8.615850e-47
Msa0279180	Msa0368860	0.816808	4.569262e-52	-8.615850e-47
Msa0279180	Msa0373500	0.813408	2.599063e-51	-8.615850e-47
Msa0279180	Msa0383000	0.831966	1.236806e-55	-8.615850e-47
Msa0279180	Msa0432010	0.817783	2.757524e-52	-8.615850e-47
Msa0279180	Msa0433150	0.814647	1.384930e-51	-8.615850e-47
Msa0279180	Msa0447130	0.803159	3.981213e-49	-8.615850e-47
Msa0279180	Msa0462780	0.819279	1.262606e-52	-8.615850e-47
Msa0279180	Msa0481890	0.834975	2.195805e-56	-8.615850e-47
Msa0279180	Msa0520870	0.804619	1.980181e-49	-8.615850e-47
Msa0279180	Msa0553750	0.817400	3.362663e-52	-8.615850e-47
Msa0279180	Msa0567170	0.806074	9.814118e-50	-8.615850e-47
Msa0279180	Msa0581840	0.833787	4.363537e-56	-8.615850e-47
Msa0279180	Msa0606100	0.854645	1.072526e-61	-8.615850e-47
Msa0279180	Msa0607800	0.822389	2.432134e-53	-8.615850e-47
Msa0279180	Msa0613580	0.800576	1.350965e-48	-8.615850e-47
Msa0279180	Msa0621710	0.833776	4.390638e-56	-8.615850e-47
Msa0279180	Msa0648040	0.821472	3.966015e-53	-8.615850e-47
Msa0279180	Msa0657700	0.816510	5.327800e-52	-8.615850e-47
Msa0279180	Msa0690740	0.807072	6.042237e-50	-8.615850e-47
Msa0279180	Msa0702810	0.813944	1.980811e-51	-8.615850e-47
Msa0279180	Msa0703600	0.810016	1.421093e-50	-8.615850e-47
Msa0279180	Msa0709200	0.807745	4.349708e-50	-8.615850e-47
Msa0279180	Msa0709440	0.828719	7.690703e-55	-8.615850e-47
Msa0279180	Msa0714520	0.830279	3.211897e-55	-8.615850e-47
Msa0279180	Msa0714790	0.817485	3.218288e-52	-8.615850e-47
Msa0279180	Msa0722220	0.815361	9.614266e-52	-8.615850e-47
Msa0279180	Msa0743440	0.815812	7.630622e-52	-8.615850e-47
Msa0279180	Msa0745720	0.818144	2.284621e-52	-8.615850e-47
Msa0279180	Msa0754450	0.812085	5.062180e-51	-8.615850e-47
Msa0279180	Msa0756820	0.821753	3.414074e-53	-8.615850e-47
Msa0279180	Msa0763550	0.810994	8.739943e-51	-8.615850e-47
Msa0279180	Msa0773630	0.838251	3.212863e-57	-8.615850e-47
Msa0279180	Msa0778550	0.815252	1.017015e-51	-8.615850e-47
Msa0279180	Msa0787590	0.816463	5.459959e-52	-8.615850e-47
Msa0279180	Msa0805680	0.864675	1.024861e-64	-8.615850e-47
Msa0279180	Msa0811020	0.840586	7.954392e-58	-8.615850e-47
Msa0279180	Msa0818880	0.800714	1.265999e-48	-8.615850e-47
Msa0279180	Msa0824450	0.814058	1.868669e-51	-8.615850e-47
Msa0279180	Msa0828970	0.815177	1.056646e-51	-8.615850e-47
Msa0279180	Msa0842070	0.804269	2.343023e-49	-8.615850e-47
Msa0279180	Msa0863620	0.816218	6.193324e-52	-8.615850e-47
Msa0279180	Msa0867110	0.817531	3.141743e-52	-8.615850e-47
Msa0279180	Msa0879920	0.801110	1.051112e-48	-8.615850e-47
Msa0279180	Msa0931590	0.815062	1.120300e-51	-8.615850e-47
Msa0279180	Msa0966480	0.826920	2.081166e-54	-8.615850e-47
Msa0279180	Msa1033920	0.807205	5.663668e-50	-8.615850e-47
Msa0279180	Msa1035570	0.801335	9.453590e-49	-8.615850e-47
Msa0279180	Msa1035610	0.811329	7.392555e-51	-8.615850e-47
Msa0279180	Msa1081390	0.807391	5.173018e-50	-8.615850e-47
Msa0279180	Msa1084530	0.834405	3.055804e-56	-8.615850e-47
Msa0279180	Msa1092420	0.800896	1.162053e-48	-8.615850e-47
Msa0279180	Msa1116220	0.807859	4.114421e-50	-8.615850e-47
Msa0279180	Msa1125820	0.835592	1.533717e-56	-8.615850e-47
Msa0279180	Msa1125990	0.836972	6.838028e-57	-8.615850e-47
Msa0279180	Msa1127470	0.821525	3.855116e-53	-8.615850e-47
Msa0279180	Msa1132530	0.809775	1.601760e-50	-8.615850e-47
Msa0279180	Msa1171290	0.827298	1.689911e-54	-8.615850e-47
Msa0279180	Msa1192570	0.801296	9.625331e-49	-8.615850e-47
Msa0279180	Msa1201540	0.822135	2.784987e-53	-8.615850e-47
Msa0279180	Msa1213830	0.800684	1.284330e-48	-8.615850e-47
Msa0279180	Msa1218820	0.826580	2.510005e-54	-8.615850e-47
Msa0279180	Msa1223390	0.808094	3.667404e-50	-8.615850e-47
Msa0279180	Msa1254540	0.832979	6.940299e-56	-8.615850e-47
Msa0279180	Msa1261050	0.813689	2.253516e-51	-8.615850e-47
Msa0279180	Msa1263740	0.820027	8.519565e-53	-8.615850e-47
Msa0279180	Msa1263780	0.818371	2.029530e-52	-8.615850e-47
Msa0279180	Msa1263900	0.840441	8.677916e-58	-8.615850e-47
Msa0279180	Msa1300460	0.824050	9.955251e-54	-8.615850e-47
Msa0279180	Msa1332950	0.801320	9.520546e-49	-8.615850e-47
Msa0279180	Msa1338210	0.810740	9.917710e-51	-8.615850e-47
Msa0279180	Msa1339170	0.834745	2.509411e-56	-8.615850e-47
Msa0279180	Msa1362130	0.821756	3.409798e-53	-8.615850e-47
Msa0279180	Msa1364410	0.811206	7.861440e-51	-8.615850e-47
Msa0279180	Msa1366150	0.804739	1.869791e-49	-8.615850e-47
Msa0279180	Msa1367180	0.838577	2.648288e-57	-8.615850e-47
Msa0279180	Msa1368750	0.823869	1.098204e-53	-8.615850e-47
Msa0279180	Msa1374790	0.819053	1.421354e-52	-8.615850e-47
Msa0279180	Msa1384150	0.817146	3.836800e-52	-8.615850e-47
Msa0279180	Msa1387440	0.814770	1.300459e-51	-8.615850e-47
Msa0279180	Msa1427590	0.805935	1.049816e-49	-8.615850e-47
Msa0279180	Msa1429070	0.805403	1.357472e-49	-8.615850e-47
Msa0279180	Msa1445120	0.805921	1.056985e-49	-8.615850e-47
Msa0279180	Msa1450190	0.826351	2.845539e-54	-8.615850e-47
Msa0279180	Msa1451820	0.819434	1.163927e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0279180	MtrunA17_Chr2g0295931	96.013	301	5	1	1	301	1	294	0.0	572
Msa0279180	MtrunA17_Chr6g0451021	35.227	352	163	6	5	301	31	372	4.74e-58	191

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0279180	AT4G15830.1	56.066	305	116	5	1	299	1	293	3.76e-110	321
Msa0279180	AT3G01450.1	40.711	253	140	2	54	301	67	314	3.11e-62	200
Msa0279180	AT3G01450.2	40.711	253	140	2	54	301	67	314	3.11e-62	200
Msa0279180	AT5G14790.1	39.695	262	139	4	54	301	70	326	3.83e-62	201
Msa0279180	AT3G18530.3	48.227	141	68	1	94	234	9	144	5.93e-35	127
Msa0279180	AT3G18530.2	49.231	130	61	1	105	234	1	125	3.89e-32	119
Msa0279180	AT3G18530.1	50.000	124	57	1	111	234	124	242	1.89e-29	115

Find 85 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGGATCTGACATGGGTTTC+AGG	0.101075	2_3:-12751263	None:intergenic
TGCTGTTGCTGCTGTGGTTT+TGG	0.159324	2_3:-12751165	None:intergenic
AGTGCCAAACTTTACCATTT+TGG	0.211534	2_3:-12752448	None:intergenic
GCAGAGTTTGATTGAAGATT+TGG	0.260333	2_3:+12751390	Msa0279180:intron
ATTGAGGAAATGGAGGAGTT+TGG	0.270099	2_3:+12752629	Msa0279180:CDS
AAAATTGAAAGAGCATTAAT+TGG	0.272815	2_3:-12752821	None:intergenic
TCCATTTCTGAGGCATTTGA+TGG	0.287057	2_3:+12751731	Msa0279180:CDS
TTTATGCAAAACCTCTATTA+TGG	0.287797	2_3:+12751661	Msa0279180:CDS
CTTGCTGCATCTCTTGCCTC+TGG	0.306269	2_3:-12752701	None:intergenic
TTCTGAGGCATTTGATGGCT+TGG	0.330088	2_3:+12751736	Msa0279180:CDS
ATCCAAATGTGTCTCCAAAA+TGG	0.333713	2_3:+12752434	Msa0279180:CDS
TTGAGGAAATGGAGGAGTTT+GGG	0.339563	2_3:+12752630	Msa0279180:CDS
CTTACTTGAATCTGAGCTTC+AGG	0.347459	2_3:-12751282	None:intergenic
GGTCTTTCTTGGGTTATTGT+TGG	0.354496	2_3:-12751111	None:intergenic
ATCGATCAATGTAATAGAAA+TGG	0.369859	2_3:-12751033	None:intergenic
TGAATAAGATGTTATAGAAA+TGG	0.374697	2_3:-12750946	None:intergenic
TTCCATTGCTTCAGAAACTA+AGG	0.397711	2_3:+12752358	Msa0279180:CDS
GCCATCAAATGCCTCAGAAA+TGG	0.405071	2_3:-12751732	None:intergenic
AGATAGTTAAACTTTAGAAT+TGG	0.410763	2_3:+12752846	Msa0279180:exon
GTTGGAAGAGCATTGTCAAT+AGG	0.411759	2_3:-12751093	None:intergenic
TGTGGAAGAGGAACAGAAGA+TGG	0.425574	2_3:+12752763	Msa0279180:CDS
TTTATTTGTGGCAGTGCTCA+TGG	0.431114	2_3:+12752913	Msa0279180:three_prime_UTR
TTGCTGCATCTCTTGCCTCT+GGG	0.433357	2_3:-12752700	None:intergenic
GTGAGTCCTTGAACGATGTT+AGG	0.437164	2_3:+12751437	Msa0279180:CDS
AAAATCAATCCTTACAAAAT+GGG	0.442598	2_3:-12751493	None:intergenic
CAGCTTTAGCCCTGATCCTA+AGG	0.446309	2_3:-12752401	None:intergenic
TTGTGTGTGAAGAAGCTGAT+AGG	0.451109	2_3:+12752301	Msa0279180:CDS
TTGTAAATTCTTAATGAGAC+CGG	0.461778	2_3:-12753088	None:intergenic
TAGAAGTTTAGCTTTATTTG+TGG	0.467412	2_3:+12752901	Msa0279180:three_prime_UTR
TGATAGGGCACTTGGATCAA+TGG	0.469114	2_3:+12752317	Msa0279180:CDS
AAATCGCCTAACATCGTTCA+AGG	0.470782	2_3:-12751443	None:intergenic
GCAGCAGGGAATTGAGGAAA+TGG	0.471845	2_3:+12752619	Msa0279180:intron
TAAAGAAAATTTAGATTAGG+AGG	0.477102	2_3:+12753045	Msa0279180:three_prime_UTR
CATACAGGAATGGGCTGGAA+GGG	0.477162	2_3:-12750896	None:intergenic
TAATCAATGGTGGGTTCCAA+TGG	0.479929	2_3:-12751225	None:intergenic
AACCTTAGTTTCTGAAGCAA+TGG	0.485737	2_3:-12752360	None:intergenic
AGAAAATTTAGATTAGGAGG+TGG	0.490993	2_3:+12753048	Msa0279180:three_prime_UTR
ATTATGGCAGCAGGGAATTG+AGG	0.494357	2_3:+12752613	Msa0279180:intron
TAACGGTAACATACAGGAAT+GGG	0.495863	2_3:-12750905	None:intergenic
GCTGCTGCTGAAATCTTCTC+AGG	0.502458	2_3:+12752269	Msa0279180:CDS
TATTGCAACTTCAGTGTATG+AGG	0.503870	2_3:+12752727	Msa0279180:CDS
AGTGTATGAGGCAATCATTA+AGG	0.512370	2_3:+12752739	Msa0279180:CDS
GTCAGATGAAATATAATCAA+TGG	0.512715	2_3:-12751238	None:intergenic
GGTTGTTGCTGTTGCTGCTG+TGG	0.527140	2_3:-12751171	None:intergenic
TGAGGCAATCATTAAGGATG+TGG	0.528288	2_3:+12752745	Msa0279180:CDS
ATCAGAAGCAGCCATAATAG+AGG	0.530469	2_3:-12751672	None:intergenic
AATCATTAAGGATGTGGAAG+AGG	0.535129	2_3:+12752751	Msa0279180:CDS
TAGGGATAAAATTGTGTTGG+TGG	0.538015	2_3:+12751607	Msa0279180:intron
AATTTAGATTAGGAGGTGGA+AGG	0.538518	2_3:+12753052	Msa0279180:three_prime_UTR
GTTTGATCCTTCCATTTCTG+AGG	0.538757	2_3:+12751721	Msa0279180:CDS
GGAAATGGAGGAGTTTGGGA+TGG	0.539001	2_3:+12752634	Msa0279180:CDS
AATCAATGGTGGGTTCCAAT+GGG	0.540052	2_3:-12751224	None:intergenic
GAAGAAGCTGATAGGGCACT+TGG	0.542782	2_3:+12752309	Msa0279180:CDS
TGTACGTTTGCTCATACTTG+AGG	0.543866	2_3:+12752872	Msa0279180:three_prime_UTR
TGATGAAAATCAAATCCCAT+TGG	0.544278	2_3:+12751209	Msa0279180:CDS
GTGGTGTAACGGTAACATAC+AGG	0.546224	2_3:-12750911	None:intergenic
CTGAGCTTCAGGATCTGACA+TGG	0.548880	2_3:-12751271	None:intergenic
ACATACAGGAATGGGCTGGA+AGG	0.549563	2_3:-12750897	None:intergenic
AATTGTGTTGGTGGTGGTGA+AGG	0.551275	2_3:+12751616	Msa0279180:CDS
AGTTTCTGAAGCAATGGAAG+AGG	0.555513	2_3:-12752354	None:intergenic
ATACAGGAATGGGCTGGAAG+GGG	0.560423	2_3:-12750895	None:intergenic
GGATAAAATTGTGTTGGTGG+TGG	0.561353	2_3:+12751610	Msa0279180:CDS
AAGCAATGGAAGAGGTGTCA+TGG	0.567617	2_3:-12752346	None:intergenic
GAAATCTAATAATTTGCTGA+TGG	0.572246	2_3:-12752950	None:intergenic
AGATGAAATATAATCAATGG+TGG	0.574708	2_3:-12751235	None:intergenic
AGGAACAGAAGATGGAAGTG+TGG	0.576946	2_3:+12752771	Msa0279180:CDS
GTAACGGTAACATACAGGAA+TGG	0.579763	2_3:-12750906	None:intergenic
GATTAGGGATAAAATTGTGT+TGG	0.587172	2_3:+12751604	Msa0279180:intron
GAAATGGAAAGAGACGTTAG+TGG	0.596462	2_3:-12750930	None:intergenic
TAGGGCACTTGGATCAATGG+TGG	0.605281	2_3:+12752320	Msa0279180:CDS
GGTAACATACAGGAATGGGC+TGG	0.609763	2_3:-12750901	None:intergenic
TTTATAATTATAAATAACAA+CGG	0.610089	2_3:+12753011	Msa0279180:three_prime_UTR
TAATTGGTGTTAGCTTAGAG+TGG	0.610320	2_3:-12752805	None:intergenic
AGGGCACTTGGATCAATGGT+GGG	0.613700	2_3:+12752321	Msa0279180:CDS
TGTGTGTGAAGAAGCTGATA+GGG	0.615409	2_3:+12752302	Msa0279180:CDS
GATGAAATATAATCAATGGT+GGG	0.618538	2_3:-12751234	None:intergenic
AAGAGACGTTAGTGGTGTAA+CGG	0.624816	2_3:-12750922	None:intergenic
TCAAATGCCTCAGAAATGGA+AGG	0.629609	2_3:-12751728	None:intergenic
TGAGCTTCAGGATCTGACAT+GGG	0.635005	2_3:-12751270	None:intergenic
GCAGGGAATTGAGGAAATGG+AGG	0.641748	2_3:+12752622	Msa0279180:intron
TCTTTCTCAAACAACAACAA+TGG	0.642542	2_3:+12751062	Msa0279180:exon
TAAATTCTTAATGAGACCGG+CGG	0.645456	2_3:-12753085	None:intergenic
GGAAGGTTAGAGAAAGCCGC+CGG	0.653729	2_3:+12753069	Msa0279180:three_prime_UTR
TCATCATTGGAAGAAGTACG+AGG	0.693109	2_3:-12751192	None:intergenic
AGTGAATGATAGACTCCCAG+AGG	0.721160	2_3:+12752685	Msa0279180:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCAAAATATTAATTCTAT+TGG	+	chr2_3:12752194-12752213	Msa0279180:intron	10.0%
!!!	ATTAAATCAATTTGTTTTAT+TGG	+	chr2_3:12752555-12752574	Msa0279180:intron	10.0%
!!!	TTTTAAAGAAAATTTAGATT+AGG	+	chr2_3:12753042-12753061	Msa0279180:three_prime_UTR	10.0%
!!	TTTCAAAATATTAATTCTAT+TGG	+	chr2_3:12752194-12752213	Msa0279180:intron	10.0%
!!!	ATTAAATCAATTTGTTTTAT+TGG	+	chr2_3:12752555-12752574	Msa0279180:intron	10.0%
!!!	TTTTAAAGAAAATTTAGATT+AGG	+	chr2_3:12753042-12753061	Msa0279180:three_prime_UTR	10.0%
!!!	AAGTTTTGAAATTTTTGTTA+TGG	+	chr2_3:12751534-12751553	Msa0279180:intron	15.0%
!!!	AAGTTTTGAAATTTTTGTTA+TGG	+	chr2_3:12751534-12751553	Msa0279180:intron	15.0%
!!	TGAATAAGATGTTATAGAAA+TGG	-	chr2_3:12750949-12750968	None:intergenic	20.0%
!!!	GAATTTTTTTACTTGTGATT+TGG	+	chr2_3:12751340-12751359	Msa0279180:intron	20.0%
!!	AAAATCAATCCTTACAAAAT+GGG	-	chr2_3:12751496-12751515	None:intergenic	20.0%
!!	AAAAATCAATCCTTACAAAA+TGG	-	chr2_3:12751497-12751516	None:intergenic	20.0%
!!!	ATTTTTGTTATGGATTGAAT+TGG	+	chr2_3:12751544-12751563	Msa0279180:intron	20.0%
!!!	TTTTTGTTATGGATTGAATT+GGG	+	chr2_3:12751545-12751564	Msa0279180:intron	20.0%
!!	AATTCATATACACCATTAAT+TGG	-	chr2_3:12752538-12752557	None:intergenic	20.0%
!!!	ATTTGTTTTATTGGTGTTTT+TGG	+	chr2_3:12752564-12752583	Msa0279180:intron	20.0%
!!!	TTTGTTTTATTGGTGTTTTT+GGG	+	chr2_3:12752565-12752584	Msa0279180:intron	20.0%
!!!	GTTTCTAAAGAGTATTATTA+TGG	+	chr2_3:12752597-12752616	Msa0279180:intron	20.0%
!!!	AAAATTGAAAGAGCATTAAT+TGG	-	chr2_3:12752824-12752843	None:intergenic	20.0%
!!!	AGATAGTTAAACTTTAGAAT+TGG	+	chr2_3:12752846-12752865	Msa0279180:exon	20.0%
!!	TAAAGAAAATTTAGATTAGG+AGG	+	chr2_3:12753045-12753064	Msa0279180:three_prime_UTR	20.0%
!!	AATTTACAATGAAATTTACG+TGG	+	chr2_3:12753102-12753121	Msa0279180:three_prime_UTR	20.0%
!!	TGAATAAGATGTTATAGAAA+TGG	-	chr2_3:12750949-12750968	None:intergenic	20.0%
!!!	GAATTTTTTTACTTGTGATT+TGG	+	chr2_3:12751340-12751359	Msa0279180:intron	20.0%
!!	AAAATCAATCCTTACAAAAT+GGG	-	chr2_3:12751496-12751515	None:intergenic	20.0%
!!	AAAAATCAATCCTTACAAAA+TGG	-	chr2_3:12751497-12751516	None:intergenic	20.0%
!!!	ATTTTTGTTATGGATTGAAT+TGG	+	chr2_3:12751544-12751563	Msa0279180:intron	20.0%
!!!	TTTTTGTTATGGATTGAATT+GGG	+	chr2_3:12751545-12751564	Msa0279180:intron	20.0%
!!	AATTCATATACACCATTAAT+TGG	-	chr2_3:12752538-12752557	None:intergenic	20.0%
!!!	ATTTGTTTTATTGGTGTTTT+TGG	+	chr2_3:12752564-12752583	Msa0279180:intron	20.0%
!!!	TTTGTTTTATTGGTGTTTTT+GGG	+	chr2_3:12752565-12752584	Msa0279180:intron	20.0%
!!!	GTTTCTAAAGAGTATTATTA+TGG	+	chr2_3:12752597-12752616	Msa0279180:intron	20.0%
!!!	AAAATTGAAAGAGCATTAAT+TGG	-	chr2_3:12752824-12752843	None:intergenic	20.0%
!!!	AGATAGTTAAACTTTAGAAT+TGG	+	chr2_3:12752846-12752865	Msa0279180:exon	20.0%
!!	TAAAGAAAATTTAGATTAGG+AGG	+	chr2_3:12753045-12753064	Msa0279180:three_prime_UTR	20.0%
!!!	GAATTTGATTTTGATTTGTG+AGG	-	chr2_3:12751003-12751022	None:intergenic	25.0%
!	ATCGATCAATGTAATAGAAA+TGG	-	chr2_3:12751036-12751055	None:intergenic	25.0%
!	GATGAAATATAATCAATGGT+GGG	-	chr2_3:12751237-12751256	None:intergenic	25.0%
!	AGATGAAATATAATCAATGG+TGG	-	chr2_3:12751238-12751257	None:intergenic	25.0%
!	GTCAGATGAAATATAATCAA+TGG	-	chr2_3:12751241-12751260	None:intergenic	25.0%
!	AAGATTTGGATTCAAAAAAC+TGG	+	chr2_3:12751404-12751423	Msa0279180:CDS	25.0%
!	AGATTTGGATTCAAAAAACT+GGG	+	chr2_3:12751405-12751424	Msa0279180:CDS	25.0%
!	ATGTGAAGTTTGTATGATTA+GGG	+	chr2_3:12751589-12751608	Msa0279180:intron	25.0%
!	TTTATGCAAAACCTCTATTA+TGG	+	chr2_3:12751661-12751680	Msa0279180:CDS	25.0%
!!	TCTGATATTTTCAATGCTTT+TGG	+	chr2_3:12751689-12751708	Msa0279180:CDS	25.0%
!	AAATTGAACCAAATTAGACT+TGG	+	chr2_3:12751936-12751955	Msa0279180:intron	25.0%
!	ACTCCATTTGAATTATGATA+TGG	+	chr2_3:12752468-12752487	Msa0279180:intron	25.0%
!	GTACCATATCATAATTCAAA+TGG	-	chr2_3:12752474-12752493	None:intergenic	25.0%
!	TTGAATTATGATATGGTACA+TGG	+	chr2_3:12752475-12752494	Msa0279180:intron	25.0%
!	AACATATCACAACCAATTAA+TGG	+	chr2_3:12752523-12752542	Msa0279180:intron	25.0%
!!!	TAGAAGTTTAGCTTTATTTG+TGG	+	chr2_3:12752901-12752920	Msa0279180:three_prime_UTR	25.0%
!!!	GAAATCTAATAATTTGCTGA+TGG	-	chr2_3:12752953-12752972	None:intergenic	25.0%
!	TTGTAAATTCTTAATGAGAC+CGG	-	chr2_3:12753091-12753110	None:intergenic	25.0%
!!!	GAATTTGATTTTGATTTGTG+AGG	-	chr2_3:12751003-12751022	None:intergenic	25.0%
!	ATCGATCAATGTAATAGAAA+TGG	-	chr2_3:12751036-12751055	None:intergenic	25.0%
!	GATGAAATATAATCAATGGT+GGG	-	chr2_3:12751237-12751256	None:intergenic	25.0%
!	AGATGAAATATAATCAATGG+TGG	-	chr2_3:12751238-12751257	None:intergenic	25.0%
!	GTCAGATGAAATATAATCAA+TGG	-	chr2_3:12751241-12751260	None:intergenic	25.0%
!	AAGATTTGGATTCAAAAAAC+TGG	+	chr2_3:12751404-12751423	Msa0279180:CDS	25.0%
!	AGATTTGGATTCAAAAAACT+GGG	+	chr2_3:12751405-12751424	Msa0279180:CDS	25.0%
!	ATGTGAAGTTTGTATGATTA+GGG	+	chr2_3:12751589-12751608	Msa0279180:intron	25.0%
!	TTTATGCAAAACCTCTATTA+TGG	+	chr2_3:12751661-12751680	Msa0279180:CDS	25.0%
!!	TCTGATATTTTCAATGCTTT+TGG	+	chr2_3:12751689-12751708	Msa0279180:CDS	25.0%
!	AAATTGAACCAAATTAGACT+TGG	+	chr2_3:12751936-12751955	Msa0279180:intron	25.0%
!	ACTCCATTTGAATTATGATA+TGG	+	chr2_3:12752468-12752487	Msa0279180:intron	25.0%
!	GTACCATATCATAATTCAAA+TGG	-	chr2_3:12752474-12752493	None:intergenic	25.0%
!	TTGAATTATGATATGGTACA+TGG	+	chr2_3:12752475-12752494	Msa0279180:intron	25.0%
!	AACATATCACAACCAATTAA+TGG	+	chr2_3:12752523-12752542	Msa0279180:intron	25.0%
!!!	TAGAAGTTTAGCTTTATTTG+TGG	+	chr2_3:12752901-12752920	Msa0279180:three_prime_UTR	25.0%
!!!	GAAATCTAATAATTTGCTGA+TGG	-	chr2_3:12752953-12752972	None:intergenic	25.0%
!	TTGTAAATTCTTAATGAGAC+CGG	-	chr2_3:12753091-12753110	None:intergenic	25.0%
	TCTTTCTCAAACAACAACAA+TGG	+	chr2_3:12751062-12751081	Msa0279180:exon	30.0%
!!!	TTGTTTTTTGGGTCTTTCTT+GGG	-	chr2_3:12751124-12751143	None:intergenic	30.0%
!!!	GCGATTTTAGGTTGTTTTTT+GGG	-	chr2_3:12751135-12751154	None:intergenic	30.0%
!!!	AGCGATTTTAGGTTGTTTTT+TGG	-	chr2_3:12751136-12751155	None:intergenic	30.0%
!!	TGGGATTTGATTTTCATCAT+TGG	-	chr2_3:12751208-12751227	None:intergenic	30.0%
	TGATGAAAATCAAATCCCAT+TGG	+	chr2_3:12751209-12751228	Msa0279180:CDS	30.0%
!	CTTCTATTACCCATTTTGTA+AGG	+	chr2_3:12751484-12751503	Msa0279180:intron	30.0%
	GATGTGAAGTTTGTATGATT+AGG	+	chr2_3:12751588-12751607	Msa0279180:intron	30.0%
	GATTAGGGATAAAATTGTGT+TGG	+	chr2_3:12751604-12751623	Msa0279180:intron	30.0%
	AGGTTTAACCAAGTCTAATT+TGG	-	chr2_3:12751947-12751966	None:intergenic	30.0%
!	AATGTTGAATTGTGTTGTTC+TGG	+	chr2_3:12752224-12752243	Msa0279180:intron	30.0%
	AATTGGTTGTGATATGTTGA+CGG	-	chr2_3:12752521-12752540	None:intergenic	30.0%
	AGAAAATTTAGATTAGGAGG+TGG	+	chr2_3:12753048-12753067	Msa0279180:three_prime_UTR	30.0%
	TCTTTCTCAAACAACAACAA+TGG	+	chr2_3:12751062-12751081	Msa0279180:exon	30.0%
!!!	TTGTTTTTTGGGTCTTTCTT+GGG	-	chr2_3:12751124-12751143	None:intergenic	30.0%
!!!	GCGATTTTAGGTTGTTTTTT+GGG	-	chr2_3:12751135-12751154	None:intergenic	30.0%
!!!	AGCGATTTTAGGTTGTTTTT+TGG	-	chr2_3:12751136-12751155	None:intergenic	30.0%
!!	TGGGATTTGATTTTCATCAT+TGG	-	chr2_3:12751208-12751227	None:intergenic	30.0%
	TGATGAAAATCAAATCCCAT+TGG	+	chr2_3:12751209-12751228	Msa0279180:CDS	30.0%
!	CTTCTATTACCCATTTTGTA+AGG	+	chr2_3:12751484-12751503	Msa0279180:intron	30.0%
	GATGTGAAGTTTGTATGATT+AGG	+	chr2_3:12751588-12751607	Msa0279180:intron	30.0%
	GATTAGGGATAAAATTGTGT+TGG	+	chr2_3:12751604-12751623	Msa0279180:intron	30.0%
	AGGTTTAACCAAGTCTAATT+TGG	-	chr2_3:12751947-12751966	None:intergenic	30.0%
!	AATGTTGAATTGTGTTGTTC+TGG	+	chr2_3:12752224-12752243	Msa0279180:intron	30.0%
	AATTGGTTGTGATATGTTGA+CGG	-	chr2_3:12752521-12752540	None:intergenic	30.0%
	AGAAAATTTAGATTAGGAGG+TGG	+	chr2_3:12753048-12753067	Msa0279180:three_prime_UTR	30.0%
	TAACGGTAACATACAGGAAT+GGG	-	chr2_3:12750908-12750927	None:intergenic	35.0%
!!!	GTTGTTTTTTGGGTCTTTCT+TGG	-	chr2_3:12751125-12751144	None:intergenic	35.0%
	GCAGAGTTTGATTGAAGATT+TGG	+	chr2_3:12751390-12751409	Msa0279180:intron	35.0%
!	GTTATGGATTGAATTGGGTT+TGG	+	chr2_3:12751550-12751569	Msa0279180:intron	35.0%
	TAGGGATAAAATTGTGTTGG+TGG	+	chr2_3:12751607-12751626	Msa0279180:intron	35.0%
!!	TTTTGCATAAAGCACTACGA+GGG	-	chr2_3:12751652-12751671	None:intergenic	35.0%
	AAATTGAACCGAATTAGACC+TGG	+	chr2_3:12752067-12752086	Msa0279180:intron	35.0%
	CATTATTTCGATGTCTGGTT+AGG	+	chr2_3:12752170-12752189	Msa0279180:intron	35.0%
	TTCCATTGCTTCAGAAACTA+AGG	+	chr2_3:12752358-12752377	Msa0279180:CDS	35.0%
!!	AACCTTAGTTTCTGAAGCAA+TGG	-	chr2_3:12752363-12752382	None:intergenic	35.0%
	TCACAAAAACCTTAGGATCA+GGG	+	chr2_3:12752392-12752411	Msa0279180:CDS	35.0%
	ATCCAAATGTGTCTCCAAAA+TGG	+	chr2_3:12752434-12752453	Msa0279180:CDS	35.0%
!!	TACCATTTTGGAGACACATT+TGG	-	chr2_3:12752439-12752458	None:intergenic	35.0%
	GTCTCCAAAATGGTAAAGTT+TGG	+	chr2_3:12752444-12752463	Msa0279180:intron	35.0%
!	AGTGCCAAACTTTACCATTT+TGG	-	chr2_3:12752451-12752470	None:intergenic	35.0%
	TATGATATGGTACATGGTCT+AGG	+	chr2_3:12752481-12752500	Msa0279180:intron	35.0%
!!	AAGAGTATTATTATGGCAGC+AGG	+	chr2_3:12752604-12752623	Msa0279180:intron	35.0%
!	AGAGTATTATTATGGCAGCA+GGG	+	chr2_3:12752605-12752624	Msa0279180:intron	35.0%
	TATTGCAACTTCAGTGTATG+AGG	+	chr2_3:12752727-12752746	Msa0279180:CDS	35.0%
	AGTGTATGAGGCAATCATTA+AGG	+	chr2_3:12752739-12752758	Msa0279180:CDS	35.0%
	AATCATTAAGGATGTGGAAG+AGG	+	chr2_3:12752751-12752770	Msa0279180:CDS	35.0%
!!	TAATTGGTGTTAGCTTAGAG+TGG	-	chr2_3:12752808-12752827	None:intergenic	35.0%
	AATTTAGATTAGGAGGTGGA+AGG	+	chr2_3:12753052-12753071	Msa0279180:three_prime_UTR	35.0%
	TAAATTCTTAATGAGACCGG+CGG	-	chr2_3:12753088-12753107	None:intergenic	35.0%
	TAACGGTAACATACAGGAAT+GGG	-	chr2_3:12750908-12750927	None:intergenic	35.0%
!!!	GTTGTTTTTTGGGTCTTTCT+TGG	-	chr2_3:12751125-12751144	None:intergenic	35.0%
	GCAGAGTTTGATTGAAGATT+TGG	+	chr2_3:12751390-12751409	Msa0279180:intron	35.0%
!	GTTATGGATTGAATTGGGTT+TGG	+	chr2_3:12751550-12751569	Msa0279180:intron	35.0%
	TAGGGATAAAATTGTGTTGG+TGG	+	chr2_3:12751607-12751626	Msa0279180:intron	35.0%
!!	TTTTGCATAAAGCACTACGA+GGG	-	chr2_3:12751652-12751671	None:intergenic	35.0%
	AAATTGAACCGAATTAGACC+TGG	+	chr2_3:12752067-12752086	Msa0279180:intron	35.0%
	CATTATTTCGATGTCTGGTT+AGG	+	chr2_3:12752170-12752189	Msa0279180:intron	35.0%
	TTCCATTGCTTCAGAAACTA+AGG	+	chr2_3:12752358-12752377	Msa0279180:CDS	35.0%
!!	AACCTTAGTTTCTGAAGCAA+TGG	-	chr2_3:12752363-12752382	None:intergenic	35.0%
	TCACAAAAACCTTAGGATCA+GGG	+	chr2_3:12752392-12752411	Msa0279180:CDS	35.0%
	ATCCAAATGTGTCTCCAAAA+TGG	+	chr2_3:12752434-12752453	Msa0279180:CDS	35.0%
!!	TACCATTTTGGAGACACATT+TGG	-	chr2_3:12752439-12752458	None:intergenic	35.0%
	GTCTCCAAAATGGTAAAGTT+TGG	+	chr2_3:12752444-12752463	Msa0279180:intron	35.0%
!	AGTGCCAAACTTTACCATTT+TGG	-	chr2_3:12752451-12752470	None:intergenic	35.0%
	TATGATATGGTACATGGTCT+AGG	+	chr2_3:12752481-12752500	Msa0279180:intron	35.0%
!!	AAGAGTATTATTATGGCAGC+AGG	+	chr2_3:12752604-12752623	Msa0279180:intron	35.0%
!	AGAGTATTATTATGGCAGCA+GGG	+	chr2_3:12752605-12752624	Msa0279180:intron	35.0%
	TATTGCAACTTCAGTGTATG+AGG	+	chr2_3:12752727-12752746	Msa0279180:CDS	35.0%
	AGTGTATGAGGCAATCATTA+AGG	+	chr2_3:12752739-12752758	Msa0279180:CDS	35.0%
	AATCATTAAGGATGTGGAAG+AGG	+	chr2_3:12752751-12752770	Msa0279180:CDS	35.0%
!!	TAATTGGTGTTAGCTTAGAG+TGG	-	chr2_3:12752808-12752827	None:intergenic	35.0%
	AATTTAGATTAGGAGGTGGA+AGG	+	chr2_3:12753052-12753071	Msa0279180:three_prime_UTR	35.0%
	TAAATTCTTAATGAGACCGG+CGG	-	chr2_3:12753088-12753107	None:intergenic	35.0%
	GTAACGGTAACATACAGGAA+TGG	-	chr2_3:12750909-12750928	None:intergenic	40.0%
	AAGAGACGTTAGTGGTGTAA+CGG	-	chr2_3:12750925-12750944	None:intergenic	40.0%
	GAAATGGAAAGAGACGTTAG+TGG	-	chr2_3:12750933-12750952	None:intergenic	40.0%
!!	GTTGGAAGAGCATTGTCAAT+AGG	-	chr2_3:12751096-12751115	None:intergenic	40.0%
	GGTCTTTCTTGGGTTATTGT+TGG	-	chr2_3:12751114-12751133	None:intergenic	40.0%
!	TCATCATTGGAAGAAGTACG+AGG	-	chr2_3:12751195-12751214	None:intergenic	40.0%
!!	AATCAATGGTGGGTTCCAAT+GGG	-	chr2_3:12751227-12751246	None:intergenic	40.0%
!!	TAATCAATGGTGGGTTCCAA+TGG	-	chr2_3:12751228-12751247	None:intergenic	40.0%
	CTTACTTGAATCTGAGCTTC+AGG	-	chr2_3:12751285-12751304	None:intergenic	40.0%
	GGATTCAAAAAACTGGGTCA+AGG	+	chr2_3:12751411-12751430	Msa0279180:CDS	40.0%
	AAATCGCCTAACATCGTTCA+AGG	-	chr2_3:12751446-12751465	None:intergenic	40.0%
!	GGATAAAATTGTGTTGGTGG+TGG	+	chr2_3:12751610-12751629	Msa0279180:CDS	40.0%
!!	GTTTTGCATAAAGCACTACG+AGG	-	chr2_3:12751653-12751672	None:intergenic	40.0%
	ATCAGAAGCAGCCATAATAG+AGG	-	chr2_3:12751675-12751694	None:intergenic	40.0%
	GTTTGATCCTTCCATTTCTG+AGG	+	chr2_3:12751721-12751740	Msa0279180:CDS	40.0%
	TCAAATGCCTCAGAAATGGA+AGG	-	chr2_3:12751731-12751750	None:intergenic	40.0%
!!	TCCATTTCTGAGGCATTTGA+TGG	+	chr2_3:12751731-12751750	Msa0279180:CDS	40.0%
	AAATTGAACCGAACTAGACC+TGG	+	chr2_3:12751805-12751824	Msa0279180:intron	40.0%
!	GTCCTGATTTGAGCTGTTTA+AGG	+	chr2_3:12751863-12751882	Msa0279180:intron	40.0%
!	CTGATTTGAGCTGTTTAAGG+CGG	+	chr2_3:12751866-12751885	Msa0279180:intron	40.0%
!	TGATTTGAGCTGTTTAAGGC+GGG	+	chr2_3:12751867-12751886	Msa0279180:intron	40.0%
	AAAATCGTGATCAAGCTGTC+CGG	-	chr2_3:12751974-12751993	None:intergenic	40.0%
	AGGTTCAACCAGGTCTAATT+CGG	-	chr2_3:12752078-12752097	None:intergenic	40.0%
	GACCTGGTTGAACCTTTAAT+CGG	+	chr2_3:12752083-12752102	Msa0279180:intron	40.0%
	TGATTGAGCTGTCCGATTAA+AGG	-	chr2_3:12752098-12752117	None:intergenic	40.0%
	GGTCTCATTATTTCGATGTC+TGG	+	chr2_3:12752165-12752184	Msa0279180:intron	40.0%
	TTGTGTGTGAAGAAGCTGAT+AGG	+	chr2_3:12752301-12752320	Msa0279180:CDS	40.0%
	TGTGTGTGAAGAAGCTGATA+GGG	+	chr2_3:12752302-12752321	Msa0279180:CDS	40.0%
!!	AGTTTCTGAAGCAATGGAAG+AGG	-	chr2_3:12752357-12752376	None:intergenic	40.0%
	CTGTGAGTCACAAAAACCTT+AGG	+	chr2_3:12752385-12752404	Msa0279180:CDS	40.0%
	GTCACAAAAACCTTAGGATC+AGG	+	chr2_3:12752391-12752410	Msa0279180:CDS	40.0%
	ATTGAGGAAATGGAGGAGTT+TGG	+	chr2_3:12752629-12752648	Msa0279180:CDS	40.0%
	TTGAGGAAATGGAGGAGTTT+GGG	+	chr2_3:12752630-12752649	Msa0279180:CDS	40.0%
	TGAGGCAATCATTAAGGATG+TGG	+	chr2_3:12752745-12752764	Msa0279180:CDS	40.0%
	TGTACGTTTGCTCATACTTG+AGG	+	chr2_3:12752872-12752891	Msa0279180:three_prime_UTR	40.0%
	TTTATTTGTGGCAGTGCTCA+TGG	+	chr2_3:12752913-12752932	Msa0279180:three_prime_UTR	40.0%
	GTAACGGTAACATACAGGAA+TGG	-	chr2_3:12750909-12750928	None:intergenic	40.0%
	AAGAGACGTTAGTGGTGTAA+CGG	-	chr2_3:12750925-12750944	None:intergenic	40.0%
	GAAATGGAAAGAGACGTTAG+TGG	-	chr2_3:12750933-12750952	None:intergenic	40.0%
!!	GTTGGAAGAGCATTGTCAAT+AGG	-	chr2_3:12751096-12751115	None:intergenic	40.0%
	GGTCTTTCTTGGGTTATTGT+TGG	-	chr2_3:12751114-12751133	None:intergenic	40.0%
!	TCATCATTGGAAGAAGTACG+AGG	-	chr2_3:12751195-12751214	None:intergenic	40.0%
!!	AATCAATGGTGGGTTCCAAT+GGG	-	chr2_3:12751227-12751246	None:intergenic	40.0%
!!	TAATCAATGGTGGGTTCCAA+TGG	-	chr2_3:12751228-12751247	None:intergenic	40.0%
	CTTACTTGAATCTGAGCTTC+AGG	-	chr2_3:12751285-12751304	None:intergenic	40.0%
	GGATTCAAAAAACTGGGTCA+AGG	+	chr2_3:12751411-12751430	Msa0279180:CDS	40.0%
	AAATCGCCTAACATCGTTCA+AGG	-	chr2_3:12751446-12751465	None:intergenic	40.0%
!	GGATAAAATTGTGTTGGTGG+TGG	+	chr2_3:12751610-12751629	Msa0279180:CDS	40.0%
!!	GTTTTGCATAAAGCACTACG+AGG	-	chr2_3:12751653-12751672	None:intergenic	40.0%
	ATCAGAAGCAGCCATAATAG+AGG	-	chr2_3:12751675-12751694	None:intergenic	40.0%
	GTTTGATCCTTCCATTTCTG+AGG	+	chr2_3:12751721-12751740	Msa0279180:CDS	40.0%
	TCAAATGCCTCAGAAATGGA+AGG	-	chr2_3:12751731-12751750	None:intergenic	40.0%
!!	TCCATTTCTGAGGCATTTGA+TGG	+	chr2_3:12751731-12751750	Msa0279180:CDS	40.0%
	AAATTGAACCGAACTAGACC+TGG	+	chr2_3:12751805-12751824	Msa0279180:intron	40.0%
!	GTCCTGATTTGAGCTGTTTA+AGG	+	chr2_3:12751863-12751882	Msa0279180:intron	40.0%
!	CTGATTTGAGCTGTTTAAGG+CGG	+	chr2_3:12751866-12751885	Msa0279180:intron	40.0%
!	TGATTTGAGCTGTTTAAGGC+GGG	+	chr2_3:12751867-12751886	Msa0279180:intron	40.0%
	AAAATCGTGATCAAGCTGTC+CGG	-	chr2_3:12751974-12751993	None:intergenic	40.0%
	AGGTTCAACCAGGTCTAATT+CGG	-	chr2_3:12752078-12752097	None:intergenic	40.0%
	GACCTGGTTGAACCTTTAAT+CGG	+	chr2_3:12752083-12752102	Msa0279180:intron	40.0%
	TGATTGAGCTGTCCGATTAA+AGG	-	chr2_3:12752098-12752117	None:intergenic	40.0%
	GGTCTCATTATTTCGATGTC+TGG	+	chr2_3:12752165-12752184	Msa0279180:intron	40.0%
	TTGTGTGTGAAGAAGCTGAT+AGG	+	chr2_3:12752301-12752320	Msa0279180:CDS	40.0%
	TGTGTGTGAAGAAGCTGATA+GGG	+	chr2_3:12752302-12752321	Msa0279180:CDS	40.0%
!!	AGTTTCTGAAGCAATGGAAG+AGG	-	chr2_3:12752357-12752376	None:intergenic	40.0%
	CTGTGAGTCACAAAAACCTT+AGG	+	chr2_3:12752385-12752404	Msa0279180:CDS	40.0%
	GTCACAAAAACCTTAGGATC+AGG	+	chr2_3:12752391-12752410	Msa0279180:CDS	40.0%
	ATTGAGGAAATGGAGGAGTT+TGG	+	chr2_3:12752629-12752648	Msa0279180:CDS	40.0%
	TTGAGGAAATGGAGGAGTTT+GGG	+	chr2_3:12752630-12752649	Msa0279180:CDS	40.0%
	TGAGGCAATCATTAAGGATG+TGG	+	chr2_3:12752745-12752764	Msa0279180:CDS	40.0%
	TGTACGTTTGCTCATACTTG+AGG	+	chr2_3:12752872-12752891	Msa0279180:three_prime_UTR	40.0%
	TTTATTTGTGGCAGTGCTCA+TGG	+	chr2_3:12752913-12752932	Msa0279180:three_prime_UTR	40.0%
	GTGGTGTAACGGTAACATAC+AGG	-	chr2_3:12750914-12750933	None:intergenic	45.0%
	TGAGCTTCAGGATCTGACAT+GGG	-	chr2_3:12751273-12751292	None:intergenic	45.0%
	GTGAGTCCTTGAACGATGTT+AGG	+	chr2_3:12751437-12751456	Msa0279180:CDS	45.0%
!!	AATTGTGTTGGTGGTGGTGA+AGG	+	chr2_3:12751616-12751635	Msa0279180:CDS	45.0%
	GCCATCAAATGCCTCAGAAA+TGG	-	chr2_3:12751735-12751754	None:intergenic	45.0%
!!	TTCTGAGGCATTTGATGGCT+TGG	+	chr2_3:12751736-12751755	Msa0279180:CDS	45.0%
	AGGTTCAACCAGGTCTAGTT+CGG	-	chr2_3:12751816-12751835	None:intergenic	45.0%
	GACCTGGTTGAACCTTAAAC+CGG	+	chr2_3:12751821-12751840	Msa0279180:intron	45.0%
	AAAATCGTGATCGAGCTGTC+CGG	-	chr2_3:12751843-12751862	None:intergenic	45.0%
	CGCCTTAAACAGCTCAAATC+AGG	-	chr2_3:12751868-12751887	None:intergenic	45.0%
!	GACTTGGTTAAACCTTGAGC+CGG	+	chr2_3:12751952-12751971	Msa0279180:intron	45.0%
!	GTCCTGATTCGAGCTGTTTA+AGG	+	chr2_3:12751994-12752013	Msa0279180:intron	45.0%
!	CTGATTCGAGCTGTTTAAGG+CGG	+	chr2_3:12751997-12752016	Msa0279180:intron	45.0%
!	TGATTCGAGCTGTTTAAGGC+GGG	+	chr2_3:12751998-12752017	Msa0279180:intron	45.0%
	GTCCGATTAAAGGTTCAACC+AGG	-	chr2_3:12752088-12752107	None:intergenic	45.0%
!	GTCCTGATTCGAGCTGTTTA+AGG	+	chr2_3:12751994-12752013	Msa0279180:intron	45.0%
!	CTGATTCGAGCTGTTTAAGG+CGG	+	chr2_3:12751997-12752016	Msa0279180:intron	45.0%
!	TGATTCGAGCTGTTTAAGGC+GGG	+	chr2_3:12751998-12752017	Msa0279180:intron	45.0%
!	TGATAGGGCACTTGGATCAA+TGG	+	chr2_3:12752317-12752336	Msa0279180:CDS	45.0%
!!	AAGCAATGGAAGAGGTGTCA+TGG	-	chr2_3:12752349-12752368	None:intergenic	45.0%
	ATTATGGCAGCAGGGAATTG+AGG	+	chr2_3:12752613-12752632	Msa0279180:intron	45.0%
	AGTGAATGATAGACTCCCAG+AGG	+	chr2_3:12752685-12752704	Msa0279180:CDS	45.0%
	TGTGGAAGAGGAACAGAAGA+TGG	+	chr2_3:12752763-12752782	Msa0279180:CDS	45.0%
	AGGAACAGAAGATGGAAGTG+TGG	+	chr2_3:12752771-12752790	Msa0279180:CDS	45.0%
	GTGGTGTAACGGTAACATAC+AGG	-	chr2_3:12750914-12750933	None:intergenic	45.0%
	TGAGCTTCAGGATCTGACAT+GGG	-	chr2_3:12751273-12751292	None:intergenic	45.0%
	GTGAGTCCTTGAACGATGTT+AGG	+	chr2_3:12751437-12751456	Msa0279180:CDS	45.0%
!!	AATTGTGTTGGTGGTGGTGA+AGG	+	chr2_3:12751616-12751635	Msa0279180:CDS	45.0%
	GCCATCAAATGCCTCAGAAA+TGG	-	chr2_3:12751735-12751754	None:intergenic	45.0%
!!	TTCTGAGGCATTTGATGGCT+TGG	+	chr2_3:12751736-12751755	Msa0279180:CDS	45.0%
	AGGTTCAACCAGGTCTAGTT+CGG	-	chr2_3:12751816-12751835	None:intergenic	45.0%
	GACCTGGTTGAACCTTAAAC+CGG	+	chr2_3:12751821-12751840	Msa0279180:intron	45.0%
	AAAATCGTGATCGAGCTGTC+CGG	-	chr2_3:12751843-12751862	None:intergenic	45.0%
	CGCCTTAAACAGCTCAAATC+AGG	-	chr2_3:12751868-12751887	None:intergenic	45.0%
!	GACTTGGTTAAACCTTGAGC+CGG	+	chr2_3:12751952-12751971	Msa0279180:intron	45.0%
!	GTCCTGATTCGAGCTGTTTA+AGG	+	chr2_3:12751994-12752013	Msa0279180:intron	45.0%
!	CTGATTCGAGCTGTTTAAGG+CGG	+	chr2_3:12751997-12752016	Msa0279180:intron	45.0%
!	TGATTCGAGCTGTTTAAGGC+GGG	+	chr2_3:12751998-12752017	Msa0279180:intron	45.0%
	GTCCGATTAAAGGTTCAACC+AGG	-	chr2_3:12752088-12752107	None:intergenic	45.0%
!	GTCCTGATTCGAGCTGTTTA+AGG	+	chr2_3:12751994-12752013	Msa0279180:intron	45.0%
!	CTGATTCGAGCTGTTTAAGG+CGG	+	chr2_3:12751997-12752016	Msa0279180:intron	45.0%
!	TGATTCGAGCTGTTTAAGGC+GGG	+	chr2_3:12751998-12752017	Msa0279180:intron	45.0%
!	TGATAGGGCACTTGGATCAA+TGG	+	chr2_3:12752317-12752336	Msa0279180:CDS	45.0%
!!	AAGCAATGGAAGAGGTGTCA+TGG	-	chr2_3:12752349-12752368	None:intergenic	45.0%
	ATTATGGCAGCAGGGAATTG+AGG	+	chr2_3:12752613-12752632	Msa0279180:intron	45.0%
	AGTGAATGATAGACTCCCAG+AGG	+	chr2_3:12752685-12752704	Msa0279180:CDS	45.0%
	TGTGGAAGAGGAACAGAAGA+TGG	+	chr2_3:12752763-12752782	Msa0279180:CDS	45.0%
	AGGAACAGAAGATGGAAGTG+TGG	+	chr2_3:12752771-12752790	Msa0279180:CDS	45.0%
!!	TTTATAATTATAAATAACAA+CGG	+	chr2_3:12753011-12753030	Msa0279180:three_prime_UTR	5.0%
!!	TTTATAATTATAAATAACAA+CGG	+	chr2_3:12753011-12753030	Msa0279180:three_prime_UTR	5.0%
!!	ATACAGGAATGGGCTGGAAG+GGG	-	chr2_3:12750898-12750917	None:intergenic	50.0%
!!	CATACAGGAATGGGCTGGAA+GGG	-	chr2_3:12750899-12750918	None:intergenic	50.0%
!!	ACATACAGGAATGGGCTGGA+AGG	-	chr2_3:12750900-12750919	None:intergenic	50.0%
	GGTAACATACAGGAATGGGC+TGG	-	chr2_3:12750904-12750923	None:intergenic	50.0%
!	GGGGTTGAGACAGCGATTTT+AGG	-	chr2_3:12751147-12751166	None:intergenic	50.0%
!!	CTGTTGCTGCTGTGGTTTTG+GGG	-	chr2_3:12751166-12751185	None:intergenic	50.0%
!	GCTGTTGCTGCTGTGGTTTT+GGG	-	chr2_3:12751167-12751186	None:intergenic	50.0%
!	TGCTGTTGCTGCTGTGGTTT+TGG	-	chr2_3:12751168-12751187	None:intergenic	50.0%
	CAGGATCTGACATGGGTTTC+AGG	-	chr2_3:12751266-12751285	None:intergenic	50.0%
	CTGAGCTTCAGGATCTGACA+TGG	-	chr2_3:12751274-12751293	None:intergenic	50.0%
!	GTCCGGTTTAAGGTTCAACC+AGG	-	chr2_3:12751826-12751845	None:intergenic	50.0%
	TGATCGAGCTGTCCGGTTTA+AGG	-	chr2_3:12751836-12751855	None:intergenic	50.0%
	CGCCTTAAACAGCTCGAATC+AGG	-	chr2_3:12751999-12752018	None:intergenic	50.0%
	AAGGCGGGTGAATGACTATG+AGG	+	chr2_3:12752013-12752032	Msa0279180:intron	50.0%
	CGCCTTAAACAGCTCGAATC+AGG	-	chr2_3:12751999-12752018	None:intergenic	50.0%
!	TTTAAGGCGGGTGAACGACT+AGG	+	chr2_3:12751879-12751898	Msa0279180:intron	50.0%
	GCTGCTGCTGAAATCTTCTC+AGG	+	chr2_3:12752269-12752288	Msa0279180:CDS	50.0%
!	GAAGAAGCTGATAGGGCACT+TGG	+	chr2_3:12752309-12752328	Msa0279180:CDS	50.0%
!	TAGGGCACTTGGATCAATGG+TGG	+	chr2_3:12752320-12752339	Msa0279180:CDS	50.0%
!	AGGGCACTTGGATCAATGGT+GGG	+	chr2_3:12752321-12752340	Msa0279180:CDS	50.0%
!	CAGCTTTAGCCCTGATCCTA+AGG	-	chr2_3:12752404-12752423	None:intergenic	50.0%
	GCAGCAGGGAATTGAGGAAA+TGG	+	chr2_3:12752619-12752638	Msa0279180:intron	50.0%
	GCAGGGAATTGAGGAAATGG+AGG	+	chr2_3:12752622-12752641	Msa0279180:intron	50.0%
	GGAAATGGAGGAGTTTGGGA+TGG	+	chr2_3:12752634-12752653	Msa0279180:CDS	50.0%
	TTGCTGCATCTCTTGCCTCT+GGG	-	chr2_3:12752703-12752722	None:intergenic	50.0%
!!	ATACAGGAATGGGCTGGAAG+GGG	-	chr2_3:12750898-12750917	None:intergenic	50.0%
!!	CATACAGGAATGGGCTGGAA+GGG	-	chr2_3:12750899-12750918	None:intergenic	50.0%
!!	ACATACAGGAATGGGCTGGA+AGG	-	chr2_3:12750900-12750919	None:intergenic	50.0%
	GGTAACATACAGGAATGGGC+TGG	-	chr2_3:12750904-12750923	None:intergenic	50.0%
!	GGGGTTGAGACAGCGATTTT+AGG	-	chr2_3:12751147-12751166	None:intergenic	50.0%
!!	CTGTTGCTGCTGTGGTTTTG+GGG	-	chr2_3:12751166-12751185	None:intergenic	50.0%
!	GCTGTTGCTGCTGTGGTTTT+GGG	-	chr2_3:12751167-12751186	None:intergenic	50.0%
!	TGCTGTTGCTGCTGTGGTTT+TGG	-	chr2_3:12751168-12751187	None:intergenic	50.0%
	CAGGATCTGACATGGGTTTC+AGG	-	chr2_3:12751266-12751285	None:intergenic	50.0%
	CTGAGCTTCAGGATCTGACA+TGG	-	chr2_3:12751274-12751293	None:intergenic	50.0%
!	GTCCGGTTTAAGGTTCAACC+AGG	-	chr2_3:12751826-12751845	None:intergenic	50.0%
	TGATCGAGCTGTCCGGTTTA+AGG	-	chr2_3:12751836-12751855	None:intergenic	50.0%
	CGCCTTAAACAGCTCGAATC+AGG	-	chr2_3:12751999-12752018	None:intergenic	50.0%
	AAGGCGGGTGAATGACTATG+AGG	+	chr2_3:12752013-12752032	Msa0279180:intron	50.0%
	CGCCTTAAACAGCTCGAATC+AGG	-	chr2_3:12751999-12752018	None:intergenic	50.0%
!	TTTAAGGCGGGTGAACGACT+AGG	+	chr2_3:12751879-12751898	Msa0279180:intron	50.0%
	GCTGCTGCTGAAATCTTCTC+AGG	+	chr2_3:12752269-12752288	Msa0279180:CDS	50.0%
!	GAAGAAGCTGATAGGGCACT+TGG	+	chr2_3:12752309-12752328	Msa0279180:CDS	50.0%
!	TAGGGCACTTGGATCAATGG+TGG	+	chr2_3:12752320-12752339	Msa0279180:CDS	50.0%
!	AGGGCACTTGGATCAATGGT+GGG	+	chr2_3:12752321-12752340	Msa0279180:CDS	50.0%
!	CAGCTTTAGCCCTGATCCTA+AGG	-	chr2_3:12752404-12752423	None:intergenic	50.0%
	GCAGCAGGGAATTGAGGAAA+TGG	+	chr2_3:12752619-12752638	Msa0279180:intron	50.0%
	GCAGGGAATTGAGGAAATGG+AGG	+	chr2_3:12752622-12752641	Msa0279180:intron	50.0%
	GGAAATGGAGGAGTTTGGGA+TGG	+	chr2_3:12752634-12752653	Msa0279180:CDS	50.0%
	TTGCTGCATCTCTTGCCTCT+GGG	-	chr2_3:12752703-12752722	None:intergenic	50.0%
!	GGTTGTTGCTGTTGCTGCTG+TGG	-	chr2_3:12751174-12751193	None:intergenic	55.0%
	AAGGCGGGTGAACGACTATG+AGG	+	chr2_3:12751882-12751901	Msa0279180:intron	55.0%
	TGATCAAGCTGTCCGGCTCA+AGG	-	chr2_3:12751967-12751986	None:intergenic	55.0%
	CTTGCTGCATCTCTTGCCTC+TGG	-	chr2_3:12752704-12752723	None:intergenic	55.0%
	GGAAGGTTAGAGAAAGCCGC+CGG	+	chr2_3:12753069-12753088	Msa0279180:three_prime_UTR	55.0%
!	GGTTGTTGCTGTTGCTGCTG+TGG	-	chr2_3:12751174-12751193	None:intergenic	55.0%
	AAGGCGGGTGAACGACTATG+AGG	+	chr2_3:12751882-12751901	Msa0279180:intron	55.0%
	TGATCAAGCTGTCCGGCTCA+AGG	-	chr2_3:12751967-12751986	None:intergenic	55.0%
	CTTGCTGCATCTCTTGCCTC+TGG	-	chr2_3:12752704-12752723	None:intergenic	55.0%
	GGAAGGTTAGAGAAAGCCGC+CGG	+	chr2_3:12753069-12753088	Msa0279180:three_prime_UTR	55.0%
	AAGGCGGGTGAACGACTAGG+AGG	+	chr2_3:12752144-12752163	Msa0279180:intron	60.0%
	AAGGCGGGTGAACGACTAGG+AGG	+	chr2_3:12752144-12752163	Msa0279180:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_3	gene	12750870	12753123	12750870	ID=Msa0279180;Name=Msa0279180
chr2_3	mRNA	12750870	12753123	12750870	ID=Msa0279180-mRNA-1;Parent=Msa0279180;Name=Msa0279180-mRNA-1;_AED=0.18;_eAED=0.18;_QI=211\|1\|1\|1\|1\|1\|5\|261\|301
chr2_3	exon	12750870	12751299	12750870	ID=Msa0279180-mRNA-1:exon:5552;Parent=Msa0279180-mRNA-1
chr2_3	exon	12751394	12751500	12751394	ID=Msa0279180-mRNA-1:exon:5553;Parent=Msa0279180-mRNA-1
chr2_3	exon	12751610	12751757	12751610	ID=Msa0279180-mRNA-1:exon:5554;Parent=Msa0279180-mRNA-1
chr2_3	exon	12752261	12752455	12752261	ID=Msa0279180-mRNA-1:exon:5555;Parent=Msa0279180-mRNA-1
chr2_3	exon	12752626	12753123	12752626	ID=Msa0279180-mRNA-1:exon:5556;Parent=Msa0279180-mRNA-1
chr2_3	five_prime_UTR	12750870	12751080	12750870	ID=Msa0279180-mRNA-1:five_prime_utr;Parent=Msa0279180-mRNA-1
chr2_3	CDS	12751081	12751299	12751081	ID=Msa0279180-mRNA-1:cds;Parent=Msa0279180-mRNA-1
chr2_3	CDS	12751394	12751500	12751394	ID=Msa0279180-mRNA-1:cds;Parent=Msa0279180-mRNA-1
chr2_3	CDS	12751610	12751757	12751610	ID=Msa0279180-mRNA-1:cds;Parent=Msa0279180-mRNA-1
chr2_3	CDS	12752261	12752455	12752261	ID=Msa0279180-mRNA-1:cds;Parent=Msa0279180-mRNA-1
chr2_3	CDS	12752626	12752862	12752626	ID=Msa0279180-mRNA-1:cds;Parent=Msa0279180-mRNA-1
chr2_3	three_prime_UTR	12752863	12753123	12752863	ID=Msa0279180-mRNA-1:three_prime_utr;Parent=Msa0279180-mRNA-1

Gene Sequence

>Msa0279180

ATGGCACTTAGACCTATTGACAATGCTCTTCCAACAATAACCCAAGAAAGACCCAAAAAACAACCTAAAATCGCTGTCTCAACCCCAAAACCACAGCAGCAACAGCAACAACCTCGTACTTCTTCCAATGATGAAAATCAAATCCCATTGGAACCCACCATTGATTATATTTCATCTGACAACCTGAAACCCATGTCAGATCCTGAAGCTCAGATTCAAAGTTTGATTGAAGATTTGGATTCAAAAAACTGGGTCAAGGTTTGTGAGTCCTTGAACGATGTTAGGCGATTTGCGTTGTTCAATTCGTCTCTTCTATTACCCATTTTGGATAAAATTGTGTTGGTGGTGGTGAAGGCAATGAAGAACCCTCGTAGTGCTTTATGCAAAACCTCTATTATGGCTGCTTCTGATATTTTCAATGCTTTTGGTGATAAATTGTTTGATCCTTCCATTTCTGAGGCATTTGATGGCTTGCTGTTGCAGCTGCTGCTGAAATCTTCTCAGGATAAAAAGTTTGTGTGTGAAGAAGCTGATAGGGCACTTGGATCAATGGTGGGTTCCATGACACCTCTTCCATTGCTTCAGAAACTAAGGTTATCTGTGAGTCACAAAAACCTTAGGATCAGGGCTAAAGCTGCTGTTTCTCTATCCAAATGTGTCTCCAAAATGGGAATTGAGGAAATGGAGGAGTTTGGGATGGAAAAGTTGATTGAAGTTGCAGCTGATTTAGTGAATGATAGACTCCCAGAGGCAAGAGATGCAGCAAGAAGTATTGCAACTTCAGTGTATGAGGCAATCATTAAGGATGTGGAAGAGGAACAGAAGATGGAAGTGTGGCAGAGTTTCTGCCACTCTAAGCTAACACCAATTAATGCTCTTTCAATTTTGAAGATAGTTAAACTTTAG

Protein sequence

>Msa0279180

MALRPIDNALPTITQERPKKQPKIAVSTPKPQQQQQQPRTSSNDENQIPLEPTIDYISSDNLKPMSDPEAQIQSLIEDLDSKNWVKVCESLNDVRRFALFNSSLLLPILDKIVLVVVKAMKNPRSALCKTSIMAASDIFNAFGDKLFDPSISEAFDGLLLQLLLKSSQDKKFVCEEADRALGSMVGSMTPLPLLQKLRLSVSHKNLRIRAKAAVSLSKCVSKMGIEEMEEFGMEKLIEVAADLVNDRLPEARDAARSIATSVYEAIIKDVEEEQKMEVWQSFCHSKLTPINALSILKIVKL*