AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0581840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0581840 MtrunA17_Chr4g0074701 93.604 1501 45 8 1 1454 1 1497 0.0 2846
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0581840 AT4G21820.3 43.085 1193 509 31 6 1148 2 1074 0.0 856
Msa0581840 AT4G21820.3 41.852 540 252 11 925 1452 792 1281 1.56e-101 355
Msa0581840 AT4G21820.2 43.961 1126 491 25 6 1023 2 1095 0.0 838
Msa0581840 AT4G21820.2 41.852 540 252 11 925 1452 786 1275 1.42e-101 355
Msa0581840 AT4G21820.2 32.544 338 170 13 817 1148 783 1068 6.32e-33 139
Msa0581840 AT4G21820.1 40.811 1208 486 33 6 1148 2 1045 0.0 786
Msa0581840 AT4G21820.1 41.852 540 252 11 925 1452 763 1252 5.92e-102 355

Find 300 sgRNAs with CRISPR-Local

Find 725 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCTCATCTTGTGGATTT+TGG 0.084368 4_1:+87352008 Msa0581840:three_prime_UTR
GTCTGGTTACTATGAAAATT+TGG 0.113066 4_1:+87342350 Msa0581840:CDS
CTAGTAACGTGGTCAATTTC+TGG 0.156011 4_1:-87344576 None:intergenic
TGCCCGATAGTGACGGATTT+AGG 0.178725 4_1:+87342105 Msa0581840:CDS
TAAAACTTGTTTCAGGAATA+AGG 0.190295 4_1:+87351566 Msa0581840:intron
TTAACTCGAAATTTGATATT+AGG 0.200670 4_1:+87350025 Msa0581840:CDS
TGGAGCTCCAGCGCTATATT+AGG 0.238865 4_1:+87349996 Msa0581840:CDS
GTAGCAGATGATATTGTTAA+TGG 0.251954 4_1:+87343275 Msa0581840:CDS
ATAACCTAATAGCCGATTTC+GGG 0.254036 4_1:-87348918 None:intergenic
AATAACCTAATAGCCGATTT+CGG 0.265838 4_1:-87348919 None:intergenic
TTAACCCGAAATCGGCTATT+AGG 0.266984 4_1:+87348914 Msa0581840:CDS
TCTGGTTACTATGAAAATTT+GGG 0.279030 4_1:+87342351 Msa0581840:CDS
CAGAAATTGACCACGTTACT+AGG 0.279579 4_1:+87344577 Msa0581840:CDS
AGGGAAATTGCTTAACATTC+TGG 0.280797 4_1:+87352031 Msa0581840:three_prime_UTR
TCTGACAATTGAGTGTCTTC+TGG 0.282520 4_1:-87348850 None:intergenic
GCCTAAATGCAGAAATGTTC+GGG 0.285149 4_1:+87351839 Msa0581840:intron
GATTCTGCTTTGAATAATAA+AGG 0.285817 4_1:-87342483 None:intergenic
GAACATGTTCGTTCACTTGC+AGG 0.293353 4_1:+87343328 Msa0581840:CDS
GCAGTCAACAAAACAATTAA+TGG 0.295526 4_1:+87350945 Msa0581840:CDS
GCCCGATAGTGACGGATTTA+GGG 0.302514 4_1:+87342106 Msa0581840:CDS
AGTTCCTGCGATTTGTGTTT+TGG 0.303824 4_1:-87346148 None:intergenic
ACAACTTCTTCGTCGCGTTT+TGG 0.307990 4_1:+87341504 Msa0581840:CDS
TGTGGTGGTGTGTTTGGATT+TGG 0.325983 4_1:-87341145 None:intergenic
TGGAGATCCAGCGCTTCATT+AGG 0.336959 4_1:+87348885 Msa0581840:CDS
AAGATATGCTCAACTCAAAA+AGG 0.339398 4_1:+87351624 Msa0581840:CDS
GGCGAAAGGCCGTTGTTTAT+AGG 0.339844 4_1:+87350368 Msa0581840:CDS
TTGATAAAACAAGTTTAGTT+GGG 0.344688 4_1:+87343529 Msa0581840:CDS
AAAGGCAGCCATTGGCATTC+AGG 0.345521 4_1:+87348110 Msa0581840:CDS
TCTTTGAGCCTCGGCCTCCT+CGG 0.350046 4_1:-87341171 None:intergenic
CAGTGAGGAGTTGGTTCTAT+TGG 0.350503 4_1:+87347908 Msa0581840:CDS
GGAGATCCAGCGCTTCATTA+GGG 0.353363 4_1:+87348886 Msa0581840:CDS
CAGTTGGAGTTGATTCTACT+TGG 0.354431 4_1:+87341448 Msa0581840:CDS
TGCTTTAGAACCTCTTGATC+AGG 0.363295 4_1:-87351370 None:intergenic
CGGTTCAAATTCTAGTTCTC+TGG 0.363977 4_1:+87343712 Msa0581840:CDS
CGGGAGTGTGGTGGTGTGTT+TGG 0.364331 4_1:-87341151 None:intergenic
GGAGCTCCAGCGCTATATTA+GGG 0.364674 4_1:+87349997 Msa0581840:CDS
GCTTAAATTAATGACTAAAT+CGG 0.366500 4_1:+87349166 Msa0581840:CDS
ACCAACTCCTCACTGCTTGC+TGG 0.366830 4_1:-87347900 None:intergenic
GTTGATAAAACAAGTTTAGT+TGG 0.369360 4_1:+87343528 Msa0581840:CDS
AATATTCTGTGTCTCAACTA+TGG 0.369377 4_1:-87349237 None:intergenic
TGTGAAGAACTTGTGGCTGC+TGG 0.373125 4_1:+87351298 Msa0581840:CDS
TGCCTAAATGCAGAAATGTT+CGG 0.373194 4_1:+87351838 Msa0581840:intron
TGTCAACTGGGCAGTTATAA+TGG 0.374839 4_1:-87344304 None:intergenic
TAGCCAAATCGCTCACTGTT+TGG 0.377033 4_1:+87341301 Msa0581840:CDS
GTGGTATAGGTAGTGCTTCC+AGG 0.379353 4_1:+87349024 Msa0581840:intron
AGAAGAAGAAGAAGCGCGTT+TGG 0.380176 4_1:-87341076 None:intergenic
ATTCTGCTTTGAATAATAAA+GGG 0.381890 4_1:-87342482 None:intergenic
CGGCTAGTCTAAGATATTGT+AGG 0.384478 4_1:-87343217 None:intergenic
CTTCATACTTGTTCAACATT+GGG 0.385260 4_1:+87351084 Msa0581840:CDS
GGAATCGCAGCTACCTTTGT+TGG 0.390783 4_1:+87343506 Msa0581840:intron
AGTGAGCTACTTCAATATAA+TGG 0.392278 4_1:+87345936 Msa0581840:CDS
TCAGACTTGGTGGCAAGATA+TGG 0.394021 4_1:+87346868 Msa0581840:CDS
AGATGGTTGAAGGAGTTTAT+AGG 0.394327 4_1:+87342328 Msa0581840:CDS
GAGGATAGCGAGCAAGATTT+CGG 0.396754 4_1:-87351408 None:intergenic
AGGGAGTGAAAATTGTCAAC+TGG 0.397970 4_1:-87344317 None:intergenic
AGTTGCCTCCCGATTGAGTA+TGG 0.398412 4_1:+87342435 Msa0581840:CDS
AACTCACAATTTCTTTACTC+TGG 0.399198 4_1:+87343306 Msa0581840:CDS
CTTTGAGCCTCGGCCTCCTC+GGG 0.400083 4_1:-87341170 None:intergenic
TTCCAGATTCGAACAATCAA+TGG 0.401509 4_1:+87340960 Msa0581840:intron
TGCATCCTTTCCTCATCTTG+TGG 0.403584 4_1:+87352001 Msa0581840:three_prime_UTR
CGATCGAAGTGTGGTGATAT+TGG 0.404080 4_1:+87345968 Msa0581840:CDS
GTAGAACTGCTTATTGTCAT+TGG 0.406096 4_1:+87352146 Msa0581840:three_prime_UTR
CTCTGAAAACGGTCTGCAAA+AGG 0.406218 4_1:-87347632 None:intergenic
GTTGAAGGAGTTTATAGGTC+TGG 0.407513 4_1:+87342333 Msa0581840:CDS
AAGCCAAACAGTGAGCGATT+TGG 0.408542 4_1:-87341304 None:intergenic
AGCAAGCAGTCAAGTGATCC+AGG 0.409945 4_1:+87342515 Msa0581840:CDS
GAAGAAGAAGAAGCGCGTTT+GGG 0.412311 4_1:-87341075 None:intergenic
CCATTGGCATTCAGGTTGCT+TGG 0.414720 4_1:+87348118 Msa0581840:CDS
AGACATTGTGAAGTTCCTTC+TGG 0.416166 4_1:-87344382 None:intergenic
GTCTTGTTGAGGAGCTTACT+AGG 0.418701 4_1:+87351694 Msa0581840:CDS
TCACAATGTCTGTTCGTTGA+AGG 0.418778 4_1:+87344394 Msa0581840:CDS
TATTATTCAAAGCAGAATCC+TGG 0.420188 4_1:+87342487 Msa0581840:CDS
GTGAAGAACTTGTGGCTGCT+GGG 0.424815 4_1:+87351299 Msa0581840:CDS
TGACAAATAACTGGCTTGCC+AGG 0.428054 4_1:-87345998 None:intergenic
AGAGCTCCCACTAAGAGCTT+AGG 0.430086 4_1:-87352097 None:intergenic
GGATTTAGGGTTGAAGGATA+AGG 0.432936 4_1:+87342119 Msa0581840:CDS
GCATCATATCGTTGTCATAC+AGG 0.433311 4_1:+87350390 Msa0581840:CDS
AGGTTGCGTTCAGCTGATAC+TGG 0.433477 4_1:+87349044 Msa0581840:CDS
TCTTCATACTTGTTCAACAT+TGG 0.437444 4_1:+87351083 Msa0581840:CDS
TCAAACTTCGACTGACGCTC+TGG 0.438633 4_1:-87348823 None:intergenic
AAGCTACGTGCAGTTGCTGC+TGG 0.439369 4_1:+87350187 Msa0581840:CDS
GGGGACATTTAACCCGAAAT+CGG 0.440031 4_1:+87348906 Msa0581840:CDS
TGAGGAGTTGGTTCTATTGG+AGG 0.440506 4_1:+87347911 Msa0581840:CDS
CTCAACTATGGCCTTCCGTC+TGG 0.446312 4_1:-87349225 None:intergenic
ATCAAAGATAAGTTTCTGTT+CGG 0.446584 4_1:-87348079 None:intergenic
ACATATGCTGCAAGTCTACT+AGG 0.452054 4_1:+87348148 Msa0581840:CDS
TCAGATCGCCGATGCTTCTC+CGG 0.453169 4_1:+87341386 Msa0581840:CDS
TGCTTCTCCGGTGATGAGTA+AGG 0.454741 4_1:+87341398 Msa0581840:CDS
TAGTAACGTGGTCAATTTCT+GGG 0.456686 4_1:-87344575 None:intergenic
GGATGCATTTCAAAACCAAC+TGG 0.457818 4_1:+87350208 Msa0581840:CDS
CCGTCAATACCATACTCAAT+CGG 0.458370 4_1:-87342444 None:intergenic
GTTGTCTTCCTCTGTCGTTT+CGG 0.459220 4_1:-87341477 None:intergenic
GGGGACTCTTTAGTGTCAAA+TGG 0.459735 4_1:+87342207 Msa0581840:CDS
TTGACTGCTTGCTTTAACCC+AGG 0.459965 4_1:-87342505 None:intergenic
TGCACATAGCATTAATTGAC+TGG 0.461490 4_1:-87351962 None:intergenic
ACATTCGTGGGTGGGTAACT+AGG 0.468279 4_1:+87350347 Msa0581840:CDS
ACCCTAAATCCGTCACTATC+GGG 0.468412 4_1:-87342107 None:intergenic
TGCAGTCTCTTTAGAAAGGC+AGG 0.468482 4_1:-87351669 None:intergenic
TACAATATCTTAGACTAGCC+GGG 0.469575 4_1:+87343219 Msa0581840:CDS
CTCGAATCACCTGCTTCTTG+CGG 0.471090 4_1:+87341336 Msa0581840:CDS
AACCCTAAATCCGTCACTAT+CGG 0.471671 4_1:-87342108 None:intergenic
GAGCTCCCACTAAGAGCTTA+GGG 0.472354 4_1:-87352096 None:intergenic
TCCAGAGGCATTGCCGTGGT+TGG 0.473074 4_1:+87348753 Msa0581840:intron
TCACCCACATCTGAATCATA+AGG 0.473997 4_1:-87346215 None:intergenic
TTACAAACTATCTCACCAAC+AGG 0.476368 4_1:+87342700 Msa0581840:CDS
GCTCCAATGCGGCATACTCC+TGG 0.477976 4_1:-87349979 None:intergenic
GGCTTATTCGATTAATCAGC+AGG 0.479285 4_1:+87351341 Msa0581840:CDS
AGGCAATCTTCTAACACATC+TGG 0.479527 4_1:+87342667 Msa0581840:CDS
GGGACTCTTTAGTGTCAAAT+GGG 0.484175 4_1:+87342208 Msa0581840:CDS
TCTCTAACAATAACTGAACT+AGG 0.486724 4_1:-87351870 None:intergenic
ATGAGTGTTTATTTGAGTCT+CGG 0.487050 4_1:+87341627 Msa0581840:CDS
GGAAGGCCACTTACCAGAAA+AGG 0.487331 4_1:+87351715 Msa0581840:CDS
CCACACTCCCGAGGAGGCCG+AGG 0.488006 4_1:+87341163 Msa0581840:CDS
ACGCTTGAAGGATTCGTTGA+AGG 0.488604 4_1:+87341572 Msa0581840:CDS
CCGATTGAGTATGGTATTGA+CGG 0.490560 4_1:+87342444 Msa0581840:CDS
AGATGCCGCAAGAAAATTCA+AGG 0.490595 4_1:+87346841 Msa0581840:intron
TTGAATGACAATAGCAGCCT+TGG 0.491486 4_1:-87348325 None:intergenic
AAACACAGATAGAAGATTGA+AGG 0.492491 4_1:+87351893 Msa0581840:CDS
CTACAATATCTTAGACTAGC+CGG 0.492731 4_1:+87343218 Msa0581840:CDS
AATGTTTCAGGAAATTCAGT+TGG 0.495697 4_1:+87341432 Msa0581840:intron
AGCTTGGCTGAAAGTGAGGC+AGG 0.496626 4_1:+87347653 Msa0581840:CDS
AATCCAAGTTGGCTGCGAAT+CGG 0.498222 4_1:+87342165 Msa0581840:CDS
GTGCTGATTCAGAACGGGAA+TGG 0.499220 4_1:-87346187 None:intergenic
AGCTTTGAGTTTCTTTGAAG+CGG 0.501431 4_1:-87341211 None:intergenic
AAACCGATTCGCAGCCAACT+TGG 0.501691 4_1:-87342168 None:intergenic
ATCTTGCCACCAAGTCTGAA+TGG 0.503046 4_1:-87346864 None:intergenic
TCCAGCAAGCAGTGAGGAGT+TGG 0.504754 4_1:+87347899 Msa0581840:CDS
AAAGGCAGGAGATTTGAGTA+TGG 0.505255 4_1:-87351655 None:intergenic
TGACTGCTTATTGTCATAGT+TGG 0.505949 4_1:+87352185 Msa0581840:three_prime_UTR
ACATCGCAACCGCAAGAAGC+AGG 0.506137 4_1:-87341345 None:intergenic
CCACATGAGAAATCATAGAT+TGG 0.507475 4_1:-87347705 None:intergenic
TTGTTGATGGCAAAGCAATC+TGG 0.507844 4_1:+87344339 Msa0581840:CDS
AGTTGCATTTCAAGACCAGC+TGG 0.507925 4_1:+87349068 Msa0581840:CDS
AGTGACGGATTTAGGGTTGA+AGG 0.509037 4_1:+87342113 Msa0581840:CDS
GTGTCTGCAGTCAAGAGGTC+AGG 0.510234 4_1:-87347955 None:intergenic
AAGCCGCAGCAAGGTGTCAA+TGG 0.511022 4_1:-87351323 None:intergenic
AACTTGGATTATAACACATA+AGG 0.511099 4_1:-87342152 None:intergenic
AGAAGTGCTGATACAAAGAC+AGG 0.511621 4_1:+87351438 Msa0581840:CDS
ACTATTCAGAAATTCCTTCG+TGG 0.512673 4_1:+87347994 Msa0581840:CDS
CAGAGAACTAGAATTTGAAC+CGG 0.513856 4_1:-87343711 None:intergenic
CTGCCAGGAGTATGCCGCAT+TGG 0.514483 4_1:+87349976 Msa0581840:CDS
GCCGTGGTTGGCTTGTGAAA+CGG 0.515885 4_1:+87348765 Msa0581840:CDS
CGTCAATACCATACTCAATC+GGG 0.516159 4_1:-87342443 None:intergenic
AGTATCAGCTGAACGCAACC+TGG 0.517224 4_1:-87349042 None:intergenic
GTCTGCATGATATTCACTAC+TGG 0.517737 4_1:+87347681 Msa0581840:CDS
TTCTATACAGACAATCGTCT+TGG 0.519044 4_1:+87351462 Msa0581840:CDS
GCATATAACAAGATGGTTGA+AGG 0.520781 4_1:+87342318 Msa0581840:CDS
TTATTTATAGATCTCCAAGA+TGG 0.520938 4_1:+87342999 Msa0581840:CDS
ACGCCGCAAGTTTCTCAAGA+TGG 0.521487 4_1:+87347596 Msa0581840:CDS
GTAGCTCTGAAAGCGCTGCC+AGG 0.522033 4_1:-87351035 None:intergenic
ATTATTCAAAGCAGAATCCT+GGG 0.522532 4_1:+87342488 Msa0581840:CDS
TGAAGAACTTGTGGCTGCTG+GGG 0.523123 4_1:+87351300 Msa0581840:CDS
TTGTCAGAAAGATGCTGCAC+TGG 0.524588 4_1:+87348865 Msa0581840:CDS
GTGGGAGCTCTTCGACATAG+TGG 0.527194 4_1:+87352109 Msa0581840:three_prime_UTR
GCAACACCCTAAGCTCTTAG+TGG 0.527528 4_1:+87352090 Msa0581840:three_prime_UTR
AGTACAAGATTGAATTATGA+TGG 0.527847 4_1:-87349189 None:intergenic
TAGTGAAATTGCAACGGTGG+TGG 0.527872 4_1:+87349129 Msa0581840:CDS
CCTCGGCCTCCTCGGGAGTG+TGG 0.531389 4_1:-87341163 None:intergenic
GAAATTGCAACGGTGGTGGA+AGG 0.531756 4_1:+87349133 Msa0581840:CDS
GGTTGCGATGTTTCAATCGC+CGG 0.533784 4_1:+87341357 Msa0581840:CDS
CTTAAAACAAAGGCAGCCAT+TGG 0.534293 4_1:+87348102 Msa0581840:CDS
AATTCAAGGCCATTCAGACT+TGG 0.534457 4_1:+87346855 Msa0581840:CDS
TCAAGGCCATTCAGACTTGG+TGG 0.534709 4_1:+87346858 Msa0581840:CDS
GGTGTGTTTGGATTTGGAAG+CGG 0.536855 4_1:-87341139 None:intergenic
TTTCAGCCAAGCTCTGAAAA+CGG 0.539449 4_1:-87347643 None:intergenic
GAAGAAGAGCGAAAAGGTGA+AGG 0.540916 4_1:-87341021 None:intergenic
AAATAATTCTTCTATACTCA+AGG 0.541196 4_1:+87343055 Msa0581840:CDS
TTCAGTCCCACATTCGTGGG+TGG 0.541456 4_1:+87350338 Msa0581840:CDS
TCTGAAAACGGTCTGCAAAA+GGG 0.541618 4_1:-87347631 None:intergenic
TTGTTTCAGGAATAAGGAGG+AGG 0.541669 4_1:+87351572 Msa0581840:intron
AGAAGTGAAGAAGAGCGAAA+AGG 0.542296 4_1:-87341027 None:intergenic
TGATAAAACAAGTTTAGTTG+GGG 0.544125 4_1:+87343530 Msa0581840:CDS
TCTGATGTAATGCGCGGAGA+AGG 0.545875 4_1:+87342647 Msa0581840:CDS
GGCAAGCCAGTTATTTGTCA+AGG 0.546171 4_1:+87346001 Msa0581840:CDS
TTCGAACAATCAATGGAAGA+AGG 0.547742 4_1:+87340967 Msa0581840:exon
TAGTTACCCACCCACGAATG+TGG 0.548697 4_1:-87350345 None:intergenic
ACAATCACATGTCCGAGGAC+TGG 0.549808 4_1:+87347569 Msa0581840:CDS
GCGGTGAAGAATTGAGTTTG+AGG 0.550293 4_1:-87341120 None:intergenic
TATTTATAGATCTCCAAGAT+GGG 0.550654 4_1:+87343000 Msa0581840:CDS
GCGTCTCATTAACAGACTCC+TGG 0.552016 4_1:+87351017 Msa0581840:CDS
CCAATCTATGATTTCTCATG+TGG 0.552337 4_1:+87347705 Msa0581840:CDS
CTATAAATAAATCTCTGACT+CGG 0.553159 4_1:-87342986 None:intergenic
ACACAAATCGCAGGAACTTG+AGG 0.553344 4_1:+87346153 Msa0581840:CDS
GGCTAGTCTAAGATATTGTA+GGG 0.553920 4_1:-87343216 None:intergenic
ATAATTCAATCTTGTACTCG+TGG 0.555248 4_1:+87349194 Msa0581840:CDS
ATCATATGCATATAACAAGA+TGG 0.556130 4_1:+87342311 Msa0581840:CDS
CCAAGCAACCTGAATGCCAA+TGG 0.559887 4_1:-87348118 None:intergenic
CGTTTCCCCTTACTCATCAC+CGG 0.561763 4_1:-87341405 None:intergenic
TCAGTCCCACATTCGTGGGT+GGG 0.562254 4_1:+87350339 Msa0581840:CDS
GCTTCTCCGGTGATGAGTAA+GGG 0.562485 4_1:+87341399 Msa0581840:CDS
AATGTCCCCTAATGAAGCGC+TGG 0.562533 4_1:-87348892 None:intergenic
ATCGGCGATCTGACTTCCAC+CGG 0.563010 4_1:-87341376 None:intergenic
TTACCATCTTGAGAAACTTG+CGG 0.563430 4_1:-87347599 None:intergenic
TTTGATTTGTTCGATTCTGG+AGG 0.564054 4_1:-87341256 None:intergenic
ACTGAAGGTTCGTAACTGCC+AGG 0.566812 4_1:+87349961 Msa0581840:intron
ATTATTCAGTCCCACATTCG+TGG 0.567609 4_1:+87350334 Msa0581840:CDS
TATCTTTGATCTTAAAACAA+AGG 0.568673 4_1:+87348092 Msa0581840:CDS
AAAACCTTATGATTCAGATG+TGG 0.568833 4_1:+87346211 Msa0581840:CDS
CGGCCTCCTCGGGAGTGTGG+TGG 0.570190 4_1:-87341160 None:intergenic
TGTTGAGGAGCTTACTAGGA+AGG 0.570411 4_1:+87351698 Msa0581840:CDS
GCTTTAGAACCTCTTGATCA+GGG 0.571589 4_1:-87351369 None:intergenic
TGCGATGTTTCAATCGCCGG+TGG 0.572081 4_1:+87341360 Msa0581840:CDS
TCAGATGTGGGTGACAATGA+AGG 0.572246 4_1:+87346224 Msa0581840:CDS
AAACCTTATGATTCAGATGT+GGG 0.572621 4_1:+87346212 Msa0581840:CDS
GAGCGAAAAGGTGAAGGTGA+TGG 0.572646 4_1:-87341015 None:intergenic
ACTCATCACCGGAGAAGCAT+CGG 0.573168 4_1:-87341394 None:intergenic
TGAGTATGGTATTGACGGAC+TGG 0.575449 4_1:+87342449 Msa0581840:CDS
TTCATCAAGTAGCGAGACCC+CGG 0.576559 4_1:-87343237 None:intergenic
GGGAGTGAAAATTGTCAACT+GGG 0.578385 4_1:-87344316 None:intergenic
AGAAATTGACCACGTTACTA+GGG 0.578886 4_1:+87344578 Msa0581840:CDS
GTTTGCAAAATAGAGATCGT+TGG 0.579287 4_1:-87346914 None:intergenic
ACTGTGCAGTCTCTTTAGAA+AGG 0.580430 4_1:-87351673 None:intergenic
GACAATAGCAGCCTTGGACA+TGG 0.581002 4_1:-87348319 None:intergenic
CCTCCAAAATCCACAAGATG+AGG 0.581591 4_1:-87352011 None:intergenic
TTCAATCTTGTACTCGTGGG+TGG 0.582802 4_1:+87349198 Msa0581840:CDS
TAGTGACTTGATTCATGACA+TGG 0.583374 4_1:-87341668 None:intergenic
AAAATCCACAAGATGAGGAA+AGG 0.583652 4_1:-87352006 None:intergenic
TTATGTGTTATAATCCAAGT+TGG 0.585741 4_1:+87342154 Msa0581840:CDS
TGCAACACTTCCGTTAGAAG+AGG 0.585745 4_1:+87346953 Msa0581840:CDS
GACACAGAATATTAATGTCA+TGG 0.586727 4_1:+87349247 Msa0581840:CDS
CAGGAGTATCCCTGATCAAG+AGG 0.587294 4_1:+87351360 Msa0581840:CDS
GACGTACTTCTCGTATACTT+CGG 0.589060 4_1:-87347821 None:intergenic
TAATTCAATCTTGTACTCGT+GGG 0.589511 4_1:+87349195 Msa0581840:CDS
GCTGAAAGTGAGGCAGGAGT+CGG 0.589728 4_1:+87347659 Msa0581840:CDS
TGGGAGCTCTTCGACATAGT+GGG 0.591233 4_1:+87352110 Msa0581840:three_prime_UTR
AAATTGCAACGGTGGTGGAA+GGG 0.591666 4_1:+87349134 Msa0581840:CDS
ATCAGCACTTCTAGCAGATG+AGG 0.592669 4_1:-87351427 None:intergenic
ACTTGATTATTACTTCCAGA+AGG 0.592884 4_1:+87344367 Msa0581840:CDS
GAACTTCAAAACCATGTCCA+AGG 0.593772 4_1:+87348308 Msa0581840:CDS
TTATTCAGTCCCACATTCGT+GGG 0.593895 4_1:+87350335 Msa0581840:CDS
TCAGAGCTTGGCTGAAAGTG+AGG 0.593975 4_1:+87347649 Msa0581840:CDS
GGGCCATTGACACCTTGCTG+CGG 0.596327 4_1:+87351320 Msa0581840:CDS
AGATTGCTTTGCCATCAACA+AGG 0.597190 4_1:-87344337 None:intergenic
TTCTGCTTTGAATAATAAAG+GGG 0.597872 4_1:-87342481 None:intergenic
AATAGGTTTACCTCTTCTAA+CGG 0.603551 4_1:-87346963 None:intergenic
TGAAAACTACATAAGCCAGC+TGG 0.603663 4_1:-87349083 None:intergenic
TGTTTCAGGAATAAGGAGGA+GGG 0.603893 4_1:+87351573 Msa0581840:intron
TAGTGAAATTGCAACGATGG+TGG 0.603926 4_1:+87350269 Msa0581840:CDS
AAGGAATTTCTGAATAGTAG+TGG 0.604504 4_1:-87347989 None:intergenic
AGTTACCCACCCACGAATGT+GGG 0.605730 4_1:-87350344 None:intergenic
CTTCTCCGGTGATGAGTAAG+GGG 0.607653 4_1:+87341400 Msa0581840:CDS
TCACAGTGTCTGCAGTCAAG+AGG 0.609022 4_1:-87347960 None:intergenic
CAATCGTCTTGGAGTTACTG+AGG 0.611458 4_1:+87351473 Msa0581840:CDS
TGCGGCGTACAACCAGTCCT+CGG 0.612962 4_1:-87347581 None:intergenic
AAAGGTGAAGGTGATGGACA+TGG 0.613849 4_1:-87341009 None:intergenic
ACCTTACAGGAACTCATGAC+CGG 0.614271 4_1:+87343692 Msa0581840:intron
ACAATAACTGAACTAGGAGT+AGG 0.615426 4_1:-87351864 None:intergenic
GAGATCCAGCGCTTCATTAG+GGG 0.616535 4_1:+87348887 Msa0581840:CDS
AAGAAGCAGGTGATTCGAGA+AGG 0.616547 4_1:-87341332 None:intergenic
GAGATGTTGTGAAGAACTTG+TGG 0.617817 4_1:+87351291 Msa0581840:CDS
TGAAAACTACAAAAGCCAGT+TGG 0.619815 4_1:-87350223 None:intergenic
GATTGCTTTGCCATCAACAA+GGG 0.619914 4_1:-87344336 None:intergenic
TCTTTAGTGTCAAATGGGGA+TGG 0.619988 4_1:+87342213 Msa0581840:CDS
ATGCTGCAAGTCTACTAGGA+AGG 0.620388 4_1:+87348152 Msa0581840:CDS
AAGTAGTGAAATTGCAACGA+TGG 0.621398 4_1:+87350266 Msa0581840:CDS
CGGAAATCATACTCAACAAG+AGG 0.621998 4_1:-87342966 None:intergenic
AAGAAGAAGAAGCGCGTTTG+GGG 0.622540 4_1:-87341074 None:intergenic
GAGACTGCACAGTCTTGTTG+AGG 0.623493 4_1:+87351683 Msa0581840:CDS
CAACACCCTAAGCTCTTAGT+GGG 0.624138 4_1:+87352091 Msa0581840:three_prime_UTR
TCCGTTTCACAAGCCAACCA+CGG 0.624767 4_1:-87348766 None:intergenic
TTCTATTGGAGGTCTCGACA+AGG 0.626721 4_1:+87347922 Msa0581840:CDS
GGCACATTGCCCGATAGTGA+CGG 0.626777 4_1:+87342098 Msa0581840:intron
TGGGTGGATAGCCAGACGGA+AGG 0.626954 4_1:+87349214 Msa0581840:CDS
TGGGTGGGTAACTAGGCGAA+AGG 0.634042 4_1:+87350354 Msa0581840:CDS
TCTTCCGAGCAATCCATCCA+CGG 0.636248 4_1:-87348356 None:intergenic
ACTGCCAAAACACAAATCGC+AGG 0.637903 4_1:+87346144 Msa0581840:CDS
ACACCACCACACTCCCGAGG+AGG 0.638844 4_1:+87341157 Msa0581840:CDS
GAAAATATGTAATACACATG+AGG 0.642055 4_1:-87352061 None:intergenic
GGTATTGACGGACTGGACGG+TGG 0.646602 4_1:+87342456 Msa0581840:CDS
CAGTAGTGAAATTGCAACGG+TGG 0.646813 4_1:+87349126 Msa0581840:CDS
CACAGATAGAAGATTGAAGG+AGG 0.650048 4_1:+87351896 Msa0581840:CDS
GCAAGCAGTCAAGTGATCCA+GGG 0.650752 4_1:+87342516 Msa0581840:CDS
TAATCGAATAAGCCGCAGCA+AGG 0.653025 4_1:-87351332 None:intergenic
GGAGAACTCCGAAACGACAG+AGG 0.654798 4_1:+87341469 Msa0581840:CDS
CTCGTGGGTGGATAGCCAGA+CGG 0.656170 4_1:+87349210 Msa0581840:CDS
CTGTCATCTGATGTAATGCG+CGG 0.661792 4_1:+87342641 Msa0581840:CDS
CTGGTTACTATGAAAATTTG+GGG 0.664315 4_1:+87342352 Msa0581840:CDS
GTGCAACGTAACCTTTCCAG+TGG 0.664767 4_1:-87350918 None:intergenic
GAGCTCCAGCGCTATATTAG+GGG 0.666944 4_1:+87349998 Msa0581840:CDS
CAATACCATACTCAATCGGG+AGG 0.668182 4_1:-87342440 None:intergenic
TGCTTGCAGCGATCGAAGTG+TGG 0.669603 4_1:+87345959 Msa0581840:CDS
ACAATATCTTAGACTAGCCG+GGG 0.669852 4_1:+87343220 Msa0581840:CDS
AACTTGTTTCAGGAATAAGG+AGG 0.671501 4_1:+87351569 Msa0581840:intron
TATGGTATTGACGGACTGGA+CGG 0.677743 4_1:+87342453 Msa0581840:CDS
TCGCAGTAGTGAAATTGCAA+CGG 0.679721 4_1:+87349123 Msa0581840:CDS
AGAAGAAGAAGCGCGTTTGG+GGG 0.680940 4_1:-87341073 None:intergenic
AACACACCACCACACTCCCG+AGG 0.681227 4_1:+87341154 Msa0581840:CDS
GATATGATGCCTATAAACAA+CGG 0.683106 4_1:-87350377 None:intergenic
ACAATACAATCACATGTCCG+AGG 0.687935 4_1:+87347564 Msa0581840:CDS
TGCAACGTAACCTTTCCAGT+GGG 0.688643 4_1:-87350917 None:intergenic
CCTAAATGCAGAAATGTTCG+GGG 0.690471 4_1:+87351840 Msa0581840:intron
AGCTCCAGCGCTATATTAGG+GGG 0.692058 4_1:+87349999 Msa0581840:CDS
TGATTCCAGAGGCATTGCCG+TGG 0.692767 4_1:+87348749 Msa0581840:intron
AGGAAAATTCCCTAGTAACG+TGG 0.692864 4_1:-87344587 None:intergenic
AAATCGCAGGAACTTGAGGA+CGG 0.697618 4_1:+87346157 Msa0581840:CDS
GGACTCTTTAGTGTCAAATG+GGG 0.704295 4_1:+87342209 Msa0581840:CDS
AGCTTATCCAGCAAGCAGTG+AGG 0.709006 4_1:+87347893 Msa0581840:CDS
ATCGTGCCATCCAACCACGA+AGG 0.721793 4_1:-87348008 None:intergenic
GAAGTGCTGATACAAAGACA+GGG 0.754042 4_1:+87351439 Msa0581840:CDS
ATAGCGCTGGAGCTCCAATG+CGG 0.758157 4_1:-87349990 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAAAATTCTAAAATAAT+TGG - chr4_1:87343121-87343140 None:intergenic 10.0%
!! GATAATTAATAAGGATAATT+TGG - chr4_1:87341819-87341838 None:intergenic 15.0%
!!! ATCGGTTTATATATAATTTT+CGG + chr4_1:87342183-87342202 Msa0581840:CDS 15.0%
!!! AGATGTTATATTTCTAAAAA+TGG + chr4_1:87342248-87342267 Msa0581840:CDS 15.0%
!! TACAGAAAAATATTAAACTT+GGG - chr4_1:87343094-87343113 None:intergenic 15.0%
!! ATACAGAAAAATATTAAACT+TGG - chr4_1:87343095-87343114 None:intergenic 15.0%
!!! TGTTTACTATATTTTTCTTA+CGG - chr4_1:87343187-87343206 None:intergenic 15.0%
!! ATTACAGAAACTAAAAAATA+AGG - chr4_1:87343418-87343437 None:intergenic 15.0%
!! AATTAAATCAAAATACAACA+TGG - chr4_1:87343592-87343611 None:intergenic 15.0%
!!! GTATTTTGATTTAATTGTTA+TGG + chr4_1:87343596-87343615 Msa0581840:intron 15.0%
!! ATCATGTTCAAAAAAATTTA+TGG - chr4_1:87344008-87344027 None:intergenic 15.0%
!!! ATTTATTTTATAGGCTATTA+TGG - chr4_1:87345170-87345189 None:intergenic 15.0%
!! ACTCTTTATTATTAACAATA+GGG + chr4_1:87345310-87345329 Msa0581840:intron 15.0%
!! ATCAAAATATGTAATCATTA+TGG + chr4_1:87345663-87345682 Msa0581840:intron 15.0%
!!! TTAAATTTTCATAAGCTATT+AGG + chr4_1:87346116-87346135 Msa0581840:CDS 15.0%
!! TAAAAAAATACTATATATGG+TGG + chr4_1:87347059-87347078 Msa0581840:intron 15.0%
!! AATTAATGAGAAAAAAACTA+GGG - chr4_1:87347142-87347161 None:intergenic 15.0%
!! ATCATAAATAAATGCTAATT+AGG - chr4_1:87347165-87347184 None:intergenic 15.0%
!! TAATTAGCATTTATTTATGA+TGG + chr4_1:87347164-87347183 Msa0581840:intron 15.0%
!!! ATTTTTGTTTTGTCAAATAT+TGG + chr4_1:87347259-87347278 Msa0581840:intron 15.0%
!!! AGTAATTACAAAAAAAGTAT+AGG - chr4_1:87347490-87347509 None:intergenic 15.0%
!! TTCAAAGAATAAACATAAAT+GGG - chr4_1:87348626-87348645 None:intergenic 15.0%
!! TTTCAAAGAATAAACATAAA+TGG - chr4_1:87348627-87348646 None:intergenic 15.0%
!!! GTATTATATCATGATTTTTT+TGG - chr4_1:87349316-87349335 None:intergenic 15.0%
!! AATATACATCACAAATTATT+TGG - chr4_1:87349889-87349908 None:intergenic 15.0%
!! TTGTTGAATGTAAATAATAT+AGG - chr4_1:87351219-87351238 None:intergenic 15.0%
!! TTTGAATTTCGAATTTCAAA+TGG - chr4_1:87340878-87340897 None:intergenic 20.0%
!! AAAGTCACTGATAATTAATA+AGG - chr4_1:87341828-87341847 None:intergenic 20.0%
!! TTAGCATTTATTTATGATAG+TGG - chr4_1:87341852-87341871 None:intergenic 20.0%
!!! GTTTATATATAATTTTCGGT+GGG + chr4_1:87342187-87342206 Msa0581840:CDS 20.0%
!!! TTTATATATAATTTTCGGTG+GGG + chr4_1:87342188-87342207 Msa0581840:CDS 20.0%
!!! ATTCTGCTTTGAATAATAAA+GGG - chr4_1:87342485-87342504 None:intergenic 20.0%
!!! TAAGTATTTGTTAATGGTTT+AGG + chr4_1:87342539-87342558 Msa0581840:intron 20.0%
!!! TGATTGTTTTATGATTTTGT+AGG + chr4_1:87342941-87342960 Msa0581840:intron 20.0%
!!! GATTGTTTTATGATTTTGTA+GGG + chr4_1:87342942-87342961 Msa0581840:intron 20.0%
!! AAATAATTCTTCTATACTCA+AGG + chr4_1:87343055-87343074 Msa0581840:CDS 20.0%
!! ACAGAAAAATATTAAACTTG+GGG - chr4_1:87343093-87343112 None:intergenic 20.0%
!!! GTTTACTATATTTTTCTTAC+GGG - chr4_1:87343186-87343205 None:intergenic 20.0%
!! AAGAAAAATATAGTAAACAG+TGG + chr4_1:87343188-87343207 Msa0581840:CDS 20.0%
!! TTCTGTAATATAATTACCTT+TGG + chr4_1:87343386-87343405 Msa0581840:intron 20.0%
!! AAAAATAAGGTAAAATCCAA+AGG - chr4_1:87343405-87343424 None:intergenic 20.0%
!! TTGATAAAACAAGTTTAGTT+GGG + chr4_1:87343529-87343548 Msa0581840:CDS 20.0%
!!! TTCTTGTAGTTTTATCTTAA+CGG + chr4_1:87344030-87344049 Msa0581840:intron 20.0%
!! TAACACACTAATAAAAAAAG+TGG - chr4_1:87344111-87344130 None:intergenic 20.0%
!!! TTAATTCTCAATTCTTTTAC+AGG + chr4_1:87344474-87344493 Msa0581840:intron 20.0%
!!! GTTTTGAATTATCAAACTTT+GGG + chr4_1:87344944-87344963 Msa0581840:intron 20.0%
!! TTAATCAACAATCTAGTAAA+CGG + chr4_1:87345205-87345224 Msa0581840:intron 20.0%
!! TAATTGTATAAATCAGTCAT+CGG - chr4_1:87345257-87345276 None:intergenic 20.0%
!! CACTCTTTATTATTAACAAT+AGG + chr4_1:87345309-87345328 Msa0581840:intron 20.0%
!!! TGCATTGTATTATTTTTGTA+AGG - chr4_1:87345823-87345842 None:intergenic 20.0%
!! ATTTCGGTTTATTATTCTAT+AGG + chr4_1:87345902-87345921 Msa0581840:intron 20.0%
!!! TATGAAAATTTAAGTTATCC+TGG - chr4_1:87346109-87346128 None:intergenic 20.0%
!! GACTAAATTCCTTTATTAAA+TGG + chr4_1:87346378-87346397 Msa0581840:intron 20.0%
!!! TTTTTAAAAAAGTAACAGAC+TGG + chr4_1:87346525-87346544 Msa0581840:intron 20.0%
!!! AATTTAAGATGTTTTGCATT+GGG - chr4_1:87346721-87346740 None:intergenic 20.0%
!!! TAATTTAAGATGTTTTGCAT+TGG - chr4_1:87346722-87346741 None:intergenic 20.0%
!! GAATTAATGAGAAAAAAACT+AGG - chr4_1:87347143-87347162 None:intergenic 20.0%
!!! ATTACAAAAAAAGTATAGGT+TGG - chr4_1:87347486-87347505 None:intergenic 20.0%
!!! TTTTATTTTCTTGTTGACAA+TGG + chr4_1:87347511-87347530 Msa0581840:intron 20.0%
!! ATTTAACCTCATGAATTTAT+TGG + chr4_1:87347741-87347760 Msa0581840:intron 20.0%
!! TGTTATGTTTCATTACTTAT+TGG + chr4_1:87347764-87347783 Msa0581840:intron 20.0%
!! TATCTTTGATCTTAAAACAA+AGG + chr4_1:87348092-87348111 Msa0581840:CDS 20.0%
!!! ACTAACTCATTAATATTTTC+GGG - chr4_1:87348497-87348516 None:intergenic 20.0%
!!! CACTAACTCATTAATATTTT+CGG - chr4_1:87348498-87348517 None:intergenic 20.0%
!! TCAAAGAATAAACATAAATG+GGG - chr4_1:87348625-87348644 None:intergenic 20.0%
!! ATCTAATTTCTCTTTAATTG+TGG + chr4_1:87348965-87348984 Msa0581840:intron 20.0%
!! GCTTAAATTAATGACTAAAT+CGG + chr4_1:87349166-87349185 Msa0581840:CDS 20.0%
!! TTTATAGATGTAGTAATAAC+TGG + chr4_1:87349406-87349425 Msa0581840:intron 20.0%
!! AGAGTAATATATATCTAATG+CGG - chr4_1:87349494-87349513 None:intergenic 20.0%
!! AATATGAGCAAACAAATAAA+AGG - chr4_1:87349937-87349956 None:intergenic 20.0%
!! TTAACTCGAAATTTGATATT+AGG + chr4_1:87350025-87350044 Msa0581840:CDS 20.0%
!! ACTATAAAACAATGAAAGTA+TGG - chr4_1:87350061-87350080 None:intergenic 20.0%
!!! TGGATATTTAGAATGTATTT+AGG + chr4_1:87351173-87351192 Msa0581840:intron 20.0%
!!! ATATTCTTTTTTTGCAGATT+TGG + chr4_1:87351252-87351271 Msa0581840:intron 20.0%
!!! TAACTTTTAAAACTTGTTTC+AGG + chr4_1:87351559-87351578 Msa0581840:intron 20.0%
!!! TTTTTTGATTTGTTCGATTC+TGG - chr4_1:87341262-87341281 None:intergenic 25.0%
!! TTGCAAAATGAATGTTGTTT+AGG + chr4_1:87341737-87341756 Msa0581840:intron 25.0%
!! ATAACACATAAGGACTTTTA+TGG - chr4_1:87342145-87342164 None:intergenic 25.0%
! AACTTGGATTATAACACATA+AGG - chr4_1:87342155-87342174 None:intergenic 25.0%
! TTATGTGTTATAATCCAAGT+TGG + chr4_1:87342154-87342173 Msa0581840:CDS 25.0%
!! GGTTTATATATAATTTTCGG+TGG + chr4_1:87342186-87342205 Msa0581840:CDS 25.0%
! ATCATATGCATATAACAAGA+TGG + chr4_1:87342311-87342330 Msa0581840:CDS 25.0%
! TCTGGTTACTATGAAAATTT+GGG + chr4_1:87342351-87342370 Msa0581840:CDS 25.0%
!! TTCTGCTTTGAATAATAAAG+GGG - chr4_1:87342484-87342503 None:intergenic 25.0%
!! GATTCTGCTTTGAATAATAA+AGG - chr4_1:87342486-87342505 None:intergenic 25.0%
! CTATAAATAAATCTCTGACT+CGG - chr4_1:87342989-87343008 None:intergenic 25.0%
! TTATTTATAGATCTCCAAGA+TGG + chr4_1:87342999-87343018 Msa0581840:CDS 25.0%
! TATTTATAGATCTCCAAGAT+GGG + chr4_1:87343000-87343019 Msa0581840:CDS 25.0%
! AAAAATATTAAACTTGGGGT+TGG - chr4_1:87343089-87343108 None:intergenic 25.0%
! TTTGATTCATTGTCATTGTA+TGG + chr4_1:87343134-87343153 Msa0581840:intron 25.0%
! TTCTGTAATATAGTTACCTT+TGG + chr4_1:87343429-87343448 Msa0581840:intron 25.0%
!! GTTGATAAAACAAGTTTAGT+TGG + chr4_1:87343528-87343547 Msa0581840:CDS 25.0%
! TGATAAAACAAGTTTAGTTG+GGG + chr4_1:87343530-87343549 Msa0581840:CDS 25.0%
! TGATATGAGAATTAGTAAAG+CGG + chr4_1:87343908-87343927 Msa0581840:intron 25.0%
!!! TACTAGATGTTTTTTACAAG+AGG + chr4_1:87343960-87343979 Msa0581840:intron 25.0%
!! ATCTTTTCTGCAATTAATGT+TGG + chr4_1:87344169-87344188 Msa0581840:intron 25.0%
!! AGAAATAATTTTTGCAACCA+AGG - chr4_1:87344231-87344250 None:intergenic 25.0%
! CAAATTAGAATATTTACCTC+AGG - chr4_1:87344610-87344629 None:intergenic 25.0%
! ATGATTCACATCTCATATAT+TGG + chr4_1:87344677-87344696 Msa0581840:intron 25.0%
! ACTCATATAGACCATTTATT+GGG + chr4_1:87344847-87344866 Msa0581840:intron 25.0%
! TAAAGTTTGACTACAAGTAT+TGG + chr4_1:87344922-87344941 Msa0581840:intron 25.0%
!!! GGTTTTGAATTATCAAACTT+TGG + chr4_1:87344943-87344962 Msa0581840:intron 25.0%
! GATTACCAACATAATTAAGT+TGG + chr4_1:87345022-87345041 Msa0581840:intron 25.0%
!!! TTTTTTTTGTTACTCTCACA+AGG + chr4_1:87345141-87345160 Msa0581840:intron 25.0%
!!! TGCGACACTATTTATTTTAT+AGG - chr4_1:87345179-87345198 None:intergenic 25.0%
! CTGATTTATACAATTAGATC+AGG + chr4_1:87345261-87345280 Msa0581840:intron 25.0%
! AAATGTTCCAAAAATAGCTT+AGG - chr4_1:87345371-87345390 None:intergenic 25.0%
! TAAGAATTTAAGCAAGTGTT+TGG - chr4_1:87345395-87345414 None:intergenic 25.0%
! AAACACTTGCTTAAATTCTT+AGG + chr4_1:87345394-87345413 Msa0581840:intron 25.0%
! TCCAAATAAGCTATAATGTA+TGG + chr4_1:87345429-87345448 Msa0581840:intron 25.0%
! ACCATACATTATAGCTTATT+TGG - chr4_1:87345433-87345452 None:intergenic 25.0%
!!! TAAAGAAGTACAGAATGTTT+TGG - chr4_1:87345529-87345548 None:intergenic 25.0%
! GATTGGTGAAATAAAATTGA+CGG + chr4_1:87345625-87345644 Msa0581840:intron 25.0%
! ATTGGTGAAATAAAATTGAC+GGG + chr4_1:87345626-87345645 Msa0581840:intron 25.0%
! ACACAATTCTTCTTTACTAT+AGG - chr4_1:87345699-87345718 None:intergenic 25.0%
!! TTATGAACTTTCAAGTGTAA+GGG - chr4_1:87345785-87345804 None:intergenic 25.0%
!! CAGTATCATGACAATAATTT+TGG - chr4_1:87346045-87346064 None:intergenic 25.0%
!!! TTATGAAGGCTTTATTGTTA+TGG + chr4_1:87346430-87346449 Msa0581840:intron 25.0%
!! TCTATATATAGTTTGTATCG+TGG + chr4_1:87346588-87346607 Msa0581840:intron 25.0%
! TACTTTCTAGATATTTATGC+CGG + chr4_1:87347087-87347106 Msa0581840:intron 25.0%
!!! TTCAACTTGTTAGTAATTTC+CGG - chr4_1:87347109-87347128 None:intergenic 25.0%
!!! TTATTTATGATGGATCTGAA+TGG + chr4_1:87347174-87347193 Msa0581840:intron 25.0%
!!! TATTTATGATGGATCTGAAT+GGG + chr4_1:87347175-87347194 Msa0581840:intron 25.0%
! TGACCATTGCTTAATAAAAA+CGG + chr4_1:87347231-87347250 Msa0581840:intron 25.0%
! CTTATAGCATAGCAAAATTT+AGG + chr4_1:87347291-87347310 Msa0581840:intron 25.0%
! ATAGTGAAAAACAATCATAC+TGG - chr4_1:87347436-87347455 None:intergenic 25.0%
! ATAACACCAATAAATTCATG+AGG - chr4_1:87347750-87347769 None:intergenic 25.0%
! ATCAAAGATAAGTTTCTGTT+CGG - chr4_1:87348082-87348101 None:intergenic 25.0%
!! TTCAATCATATTTTCGAATG+TGG + chr4_1:87348265-87348284 Msa0581840:CDS 25.0%
! ATATACTTTGTATGACTTTC+TGG + chr4_1:87348466-87348485 Msa0581840:intron 25.0%
! CGAAAATATTAATGAGTTAG+TGG + chr4_1:87348496-87348515 Msa0581840:intron 25.0%
! TATGTATAACTAACATTCAG+TGG - chr4_1:87348546-87348565 None:intergenic 25.0%
! ACAACATGAGATAATAATGT+TGG - chr4_1:87349006-87349025 None:intergenic 25.0%
! AACATTATTATCTCATGTTG+TGG + chr4_1:87349005-87349024 Msa0581840:intron 25.0%
! AGTACAAGATTGAATTATGA+TGG - chr4_1:87349192-87349211 None:intergenic 25.0%
! TAAACAGACAAACAAAAGAA+CGG - chr4_1:87349343-87349362 None:intergenic 25.0%
! GAGTAATATATATCTAATGC+GGG - chr4_1:87349493-87349512 None:intergenic 25.0%
! TTAGTGTTTCTTAGAATTTG+TGG - chr4_1:87349714-87349733 None:intergenic 25.0%
!! CTAGCTAGTTTGAAATAATT+AGG - chr4_1:87349823-87349842 None:intergenic 25.0%
! CTAATTATTTCAAACTAGCT+AGG + chr4_1:87349821-87349840 Msa0581840:intron 25.0%
!! ACAAATTATTTGGAGCTTTA+AGG - chr4_1:87349879-87349898 None:intergenic 25.0%
! CAAATAAAACTCTAATCGAA+AGG - chr4_1:87349914-87349933 None:intergenic 25.0%
! TTGCTCATATTTAATACTGA+AGG + chr4_1:87349946-87349965 Msa0581840:intron 25.0%
! TATTTCATTGAGCTTGTAAT+TGG + chr4_1:87350084-87350103 Msa0581840:intron 25.0%
! ATTTCATTGAGCTTGTAATT+GGG + chr4_1:87350085-87350104 Msa0581840:intron 25.0%
!!! GTTTTGTCTTATTATGATGT+AGG + chr4_1:87350154-87350173 Msa0581840:intron 25.0%
! TAACATGAAAATTGGGTAAT+GGG + chr4_1:87350686-87350705 Msa0581840:intron 25.0%
! TAAACTAAAAATCAAGTGGA+GGG - chr4_1:87350748-87350767 None:intergenic 25.0%
! ATAAACTAAAAATCAAGTGG+AGG - chr4_1:87350749-87350768 None:intergenic 25.0%
! AGGATAAACTAAAAATCAAG+TGG - chr4_1:87350752-87350771 None:intergenic 25.0%
!! ATATAGGACTTTTTATGTCT+CGG - chr4_1:87351203-87351222 None:intergenic 25.0%
! CATGATATATCAACTTTCAA+TGG - chr4_1:87351522-87351541 None:intergenic 25.0%
!! TAAAACTTGTTTCAGGAATA+AGG + chr4_1:87351566-87351585 Msa0581840:intron 25.0%
! GAAAATATGTAATACACATG+AGG - chr4_1:87352064-87352083 None:intergenic 25.0%
GAAGAAGAAGATTCAACTTT+GGG - chr4_1:87340922-87340941 None:intergenic 30.0%
AGAAGAAGAAGATTCAACTT+TGG - chr4_1:87340923-87340942 None:intergenic 30.0%
AATGTTTCAGGAAATTCAGT+TGG + chr4_1:87341432-87341451 Msa0581840:intron 30.0%
ATGAGTGTTTATTTGAGTCT+CGG + chr4_1:87341627-87341646 Msa0581840:CDS 30.0%
CAAATTTCAAGCAAAACATG+TGG - chr4_1:87341712-87341731 None:intergenic 30.0%
!!! GACACTCATTTTGAAACATA+TGG + chr4_1:87341994-87342013 Msa0581840:intron 30.0%
!!! TAAACTGTTTTTTACACACG+AGG + chr4_1:87342278-87342297 Msa0581840:intron 30.0%
!!! AAACTGTTTTTTACACACGA+GGG + chr4_1:87342279-87342298 Msa0581840:intron 30.0%
GTCTGGTTACTATGAAAATT+TGG + chr4_1:87342350-87342369 Msa0581840:CDS 30.0%
CTGGTTACTATGAAAATTTG+GGG + chr4_1:87342352-87342371 Msa0581840:CDS 30.0%
TATTATTCAAAGCAGAATCC+TGG + chr4_1:87342487-87342506 Msa0581840:CDS 30.0%
ATTATTCAAAGCAGAATCCT+GGG + chr4_1:87342488-87342507 Msa0581840:CDS 30.0%
! ATTTGTTAATGGTTTAGGTG+TGG + chr4_1:87342544-87342563 Msa0581840:intron 30.0%
!! CTAACACATCTGGTTATTTT+AGG + chr4_1:87342677-87342696 Msa0581840:CDS 30.0%
GTAGCAGATGATATTGTTAA+TGG + chr4_1:87343275-87343294 Msa0581840:CDS 30.0%
AACTCACAATTTCTTTACTC+TGG + chr4_1:87343306-87343325 Msa0581840:CDS 30.0%
TTAAACGTAATCAAGTCCAA+AGG - chr4_1:87343448-87343467 None:intergenic 30.0%
!! ATTACGTTTAACTTGTAACC+TGG + chr4_1:87343457-87343476 Msa0581840:intron 30.0%
!!! CTTGTTTTATCAACCAACAA+AGG - chr4_1:87343522-87343541 None:intergenic 30.0%
! ATACGAACTTTGAGAAAACA+AGG - chr4_1:87343637-87343656 None:intergenic 30.0%
! GATTTTCTTTACTACCTTAC+AGG + chr4_1:87343679-87343698 Msa0581840:intron 30.0%
!!! ATTGCTTTTGAAATGGATTC+AGG + chr4_1:87343736-87343755 Msa0581840:CDS 30.0%
! ATTTCTGAAGGAAATCTACA+GGG - chr4_1:87343787-87343806 None:intergenic 30.0%
! TATTTCTGAAGGAAATCTAC+AGG - chr4_1:87343788-87343807 None:intergenic 30.0%
GATATGAGAATTAGTAAAGC+GGG + chr4_1:87343909-87343928 Msa0581840:intron 30.0%
GTTACACTTTCTTTCAACTT+TGG + chr4_1:87344127-87344146 Msa0581840:intron 30.0%
ACTTGATTATTACTTCCAGA+AGG + chr4_1:87344367-87344386 Msa0581840:CDS 30.0%
! ATAATTATCAGCACTGAGAA+GGG - chr4_1:87344438-87344457 None:intergenic 30.0%
! AATAATTATCAGCACTGAGA+AGG - chr4_1:87344439-87344458 None:intergenic 30.0%
CAGGAACTTTATGAAAAAAG+TGG + chr4_1:87344493-87344512 Msa0581840:intron 30.0%
!! TTTTGTGGTTCTACCTTAAT+GGG - chr4_1:87344780-87344799 None:intergenic 30.0%
!! ATTTTGTGGTTCTACCTTAA+TGG - chr4_1:87344781-87344800 None:intergenic 30.0%
CACTCATATAGACCATTTAT+TGG + chr4_1:87344846-87344865 Msa0581840:intron 30.0%
! TACAACTTGTGATTTTGTCA+AGG - chr4_1:87344879-87344898 None:intergenic 30.0%
TCACACCAACTTAATTATGT+TGG - chr4_1:87345030-87345049 None:intergenic 30.0%
TTGGTGTGATGAGTTTATTT+GGG + chr4_1:87345041-87345060 Msa0581840:intron 30.0%
GATTATTGAAATAAGCTCGT+TGG + chr4_1:87345344-87345363 Msa0581840:intron 30.0%
AGGTTGAAATAGAACTAGAT+TGG + chr4_1:87345608-87345627 Msa0581840:intron 30.0%
! TATGAACTTTCAAGTGTAAG+GGG - chr4_1:87345784-87345803 None:intergenic 30.0%
! ATTTTTGTAAGGTGCATTCT+TGG - chr4_1:87345812-87345831 None:intergenic 30.0%
!! TTAGTAGGATGATGGAATTT+CGG + chr4_1:87345886-87345905 Msa0581840:intron 30.0%
AGTGAGCTACTTCAATATAA+TGG + chr4_1:87345936-87345955 Msa0581840:CDS 30.0%
! CTTTTTCCTTGACAAATAAC+TGG - chr4_1:87346010-87346029 None:intergenic 30.0%
GTTATTTGTCAAGGAAAAAG+TGG + chr4_1:87346010-87346029 Msa0581840:CDS 30.0%
AATTTCACTTTCTTTGTTCC+AGG + chr4_1:87346088-87346107 Msa0581840:intron 30.0%
AAAACCTTATGATTCAGATG+TGG + chr4_1:87346211-87346230 Msa0581840:CDS 30.0%
AAACCTTATGATTCAGATGT+GGG + chr4_1:87346212-87346231 Msa0581840:CDS 30.0%
CTTCATAAGTATTCAGAAGT+TGG - chr4_1:87346418-87346437 None:intergenic 30.0%
CAACTTCTGAATACTTATGA+AGG + chr4_1:87346416-87346435 Msa0581840:intron 30.0%
!! ATCCTTCATTTTTGTGTGTT+AGG + chr4_1:87346666-87346685 Msa0581840:intron 30.0%
GTTAGGCAATATTCTCTTAT+TGG + chr4_1:87346683-87346702 Msa0581840:intron 30.0%
AATAGGTTTACCTCTTCTAA+CGG - chr4_1:87346966-87346985 None:intergenic 30.0%
AATGAGAAAAAAACTAGGGA+TGG - chr4_1:87347138-87347157 None:intergenic 30.0%
!! CAACCGTTTTTATTAAGCAA+TGG - chr4_1:87347237-87347256 None:intergenic 30.0%
CATTGCTTAATAAAAACGGT+TGG + chr4_1:87347235-87347254 Msa0581840:intron 30.0%
CTGCAATTTAGTACAAAAGT+TGG + chr4_1:87347329-87347348 Msa0581840:intron 30.0%
TCACAGATCAAGCAAAATAT+TGG - chr4_1:87347404-87347423 None:intergenic 30.0%
AAGGAATTTCTGAATAGTAG+TGG - chr4_1:87347992-87348011 None:intergenic 30.0%
AAATTCAGTGTAATTTCCGT+AGG + chr4_1:87348193-87348212 Msa0581840:intron 30.0%
AGAATGAATACTTGTCAACA+TGG + chr4_1:87348570-87348589 Msa0581840:intron 30.0%
ATTCAGTTATCATTCTAGTC+AGG + chr4_1:87348653-87348672 Msa0581840:intron 30.0%
! AATAACCTAATAGCCGATTT+CGG - chr4_1:87348922-87348941 None:intergenic 30.0%
TCGGCTATTAGGTTATTATT+TGG + chr4_1:87348925-87348944 Msa0581840:intron 30.0%
ATTATCTCATGTTGTGGTAT+AGG + chr4_1:87349011-87349030 Msa0581840:intron 30.0%
ATAATTCAATCTTGTACTCG+TGG + chr4_1:87349194-87349213 Msa0581840:CDS 30.0%
TAATTCAATCTTGTACTCGT+GGG + chr4_1:87349195-87349214 Msa0581840:CDS 30.0%
AATATTCTGTGTCTCAACTA+TGG - chr4_1:87349240-87349259 None:intergenic 30.0%
GACACAGAATATTAATGTCA+TGG + chr4_1:87349247-87349266 Msa0581840:CDS 30.0%
TTTGTCTGTTTATTAGCTCA+TGG + chr4_1:87349351-87349370 Msa0581840:intron 30.0%
ATGCTATGCTTTATCACTAT+TGG + chr4_1:87349454-87349473 Msa0581840:intron 30.0%
TGCTATGCTTTATCACTATT+GGG + chr4_1:87349455-87349474 Msa0581840:intron 30.0%
TTGACACCATGTTGAAATTT+GGG - chr4_1:87349553-87349572 None:intergenic 30.0%
TTTGACACCATGTTGAAATT+TGG - chr4_1:87349554-87349573 None:intergenic 30.0%
GTTTCTTAGAATTTGTGGTT+GGG - chr4_1:87349709-87349728 None:intergenic 30.0%
TGTTTCTTAGAATTTGTGGT+TGG - chr4_1:87349710-87349729 None:intergenic 30.0%
CTAAGAAACACTAAATGTGA+TGG + chr4_1:87349720-87349739 Msa0581840:intron 30.0%
TAATTGAGCTACAACCAATT+TGG + chr4_1:87349844-87349863 Msa0581840:intron 30.0%
AATTGAGCTACAACCAATTT+GGG + chr4_1:87349845-87349864 Msa0581840:intron 30.0%
GATATGATGCCTATAAACAA+CGG - chr4_1:87350380-87350399 None:intergenic 30.0%
TACTTCGTTTGCCTATTTAA+GGG - chr4_1:87350575-87350594 None:intergenic 30.0%
GTAACATGAAAATTGGGTAA+TGG + chr4_1:87350685-87350704 Msa0581840:intron 30.0%
AACATGAAAATTGGGTAATG+GGG + chr4_1:87350687-87350706 Msa0581840:intron 30.0%
AACTAAACAGACTACAATTC+AGG - chr4_1:87350840-87350859 None:intergenic 30.0%
! TATAAATTTTGTAGTCCCAC+TGG + chr4_1:87350902-87350921 Msa0581840:intron 30.0%
GCAGTCAACAAAACAATTAA+TGG + chr4_1:87350945-87350964 Msa0581840:CDS 30.0%
TCTTCATACTTGTTCAACAT+TGG + chr4_1:87351083-87351102 Msa0581840:CDS 30.0%
CTTCATACTTGTTCAACATT+GGG + chr4_1:87351084-87351103 Msa0581840:CDS 30.0%
TATGCCTTGCAAAATAGAAT+CGG - chr4_1:87351147-87351166 None:intergenic 30.0%
! TTTTGCAAGGCATATAAAAG+TGG + chr4_1:87351153-87351172 Msa0581840:intron 30.0%
! TATAGGACTTTTTATGTCTC+GGG - chr4_1:87351202-87351221 None:intergenic 30.0%
! GAGGTTTCAATATTTTGTAG+TGG + chr4_1:87351492-87351511 Msa0581840:intron 30.0%
AAGATATGCTCAACTCAAAA+AGG + chr4_1:87351624-87351643 Msa0581840:CDS 30.0%
GAATGAAGAGAGAAATCTAA+CGG + chr4_1:87351795-87351814 Msa0581840:intron 30.0%
TCTCTAACAATAACTGAACT+AGG - chr4_1:87351873-87351892 None:intergenic 30.0%
AAACACAGATAGAAGATTGA+AGG + chr4_1:87351893-87351912 Msa0581840:CDS 30.0%
TTGACTGGAAAAAACTTCAA+AGG - chr4_1:87351950-87351969 None:intergenic 30.0%
AAAAGGTTAACGTTGGGATT+TGG + chr4_1:87340809-87340828 Msa0581840:intron 35.0%
AAAGGTTAACGTTGGGATTT+GGG + chr4_1:87340810-87340829 Msa0581840:intron 35.0%
TTCCAGATTCGAACAATCAA+TGG + chr4_1:87340960-87340979 Msa0581840:intron 35.0%
! TTCCATTGATTGTTCGAATC+TGG - chr4_1:87340965-87340984 None:intergenic 35.0%
TTCGAACAATCAATGGAAGA+AGG + chr4_1:87340967-87340986 Msa0581840:exon 35.0%
!! CTTTGATTTTCTTTGAGCCT+CGG - chr4_1:87341183-87341202 None:intergenic 35.0%
!! AGCTTTGAGTTTCTTTGAAG+CGG - chr4_1:87341214-87341233 None:intergenic 35.0%
!! TTTGATTTGTTCGATTCTGG+AGG - chr4_1:87341259-87341278 None:intergenic 35.0%
TAGTGACTTGATTCATGACA+TGG - chr4_1:87341671-87341690 None:intergenic 35.0%
TGTCATGAATCAAGTCACTA+AGG + chr4_1:87341671-87341690 Msa0581840:intron 35.0%
TGCTTATAGAGTAGTGTACA+TGG + chr4_1:87341882-87341901 Msa0581840:intron 35.0%
TATAGAGTAGTGTACATGGA+TGG + chr4_1:87341886-87341905 Msa0581840:intron 35.0%
GTTTATCAGACGATTGATGA+AGG + chr4_1:87342060-87342079 Msa0581840:intron 35.0%
TGAAGGAAGGCTAAATATGA+AGG + chr4_1:87342077-87342096 Msa0581840:intron 35.0%
GCATATAACAAGATGGTTGA+AGG + chr4_1:87342318-87342337 Msa0581840:CDS 35.0%
AGATGGTTGAAGGAGTTTAT+AGG + chr4_1:87342328-87342347 Msa0581840:CDS 35.0%
CCATTAACAAATACTTACCC+TGG - chr4_1:87342536-87342555 None:intergenic 35.0%
! CCAGGGTAAGTATTTGTTAA+TGG + chr4_1:87342533-87342552 Msa0581840:intron 35.0%
!! ACAGCTGTTTCTACAGTTTA+AGG + chr4_1:87342581-87342600 Msa0581840:intron 35.0%
TTACAAACTATCTCACCAAC+AGG + chr4_1:87342700-87342719 Msa0581840:CDS 35.0%
TAGAAGATATACGAACCTGT+TGG - chr4_1:87342718-87342737 None:intergenic 35.0%
! TGCAACATCTTTTGTTGAAG+AGG + chr4_1:87342809-87342828 Msa0581840:intron 35.0%
! ATCTTTTGTTGAAGAGGTCT+TGG + chr4_1:87342815-87342834 Msa0581840:intron 35.0%
CGACAGCATAAACATTAAAG+TGG - chr4_1:87342865-87342884 None:intergenic 35.0%
!! TACACAATTTTAGCCCATCT+TGG - chr4_1:87343016-87343035 None:intergenic 35.0%
!! GGCTAGTCTAAGATATTGTA+GGG - chr4_1:87343219-87343238 None:intergenic 35.0%
CTACAATATCTTAGACTAGC+CGG + chr4_1:87343218-87343237 Msa0581840:CDS 35.0%
! TACAATATCTTAGACTAGCC+GGG + chr4_1:87343219-87343238 Msa0581840:CDS 35.0%
AACACAATTTCCCGTTTCAT+TGG + chr4_1:87343485-87343504 Msa0581840:intron 35.0%
GGGGAAATTTCAAAAATTCG+CGG + chr4_1:87343549-87343568 Msa0581840:CDS 35.0%
ATTTCAAAAATTCGCGGACT+TGG + chr4_1:87343555-87343574 Msa0581840:CDS 35.0%
CAGAGAACTAGAATTTGAAC+CGG - chr4_1:87343714-87343733 None:intergenic 35.0%
!!! CTCTGGAATTGCTTTTGAAA+TGG + chr4_1:87343729-87343748 Msa0581840:CDS 35.0%
!! ACAGCATTGTCTATTTCTGA+AGG - chr4_1:87343799-87343818 None:intergenic 35.0%
CATATCATACCATAAGCTGT+CGG - chr4_1:87343895-87343914 None:intergenic 35.0%
!! AAAAAGCGTCACAGAACAAA+AGG - chr4_1:87344097-87344116 None:intergenic 35.0%
GTTACACTTTCTTTCAACCT+TGG + chr4_1:87344211-87344230 Msa0581840:intron 35.0%
!!! GTTAGCCACTTATTTTTTGC+AGG + chr4_1:87344271-87344290 Msa0581840:intron 35.0%
AACAGCCTGCAAAAAATAAG+TGG - chr4_1:87344279-87344298 None:intergenic 35.0%
! AATTTTCACTCCCTTGTTGA+TGG + chr4_1:87344326-87344345 Msa0581840:CDS 35.0%
TAGTAACGTGGTCAATTTCT+GGG - chr4_1:87344578-87344597 None:intergenic 35.0%
AGAAATTGACCACGTTACTA+GGG + chr4_1:87344578-87344597 Msa0581840:CDS 35.0%
!! TACCTTAATGGGTTTGAAAC+AGG - chr4_1:87344769-87344788 None:intergenic 35.0%
CAAGGTTCAATCCCAATAAA+TGG - chr4_1:87344861-87344880 None:intergenic 35.0%
ATCAAACTTTGGGCTGATTA+AGG + chr4_1:87344954-87344973 Msa0581840:intron 35.0%
GTTGGTGTGATGAGTTTATT+TGG + chr4_1:87345040-87345059 Msa0581840:intron 35.0%
AAATAAATAGTGTCGCAGCT+AGG + chr4_1:87345182-87345201 Msa0581840:intron 35.0%
!! TCAGCGTTGAATTCTTTTCA+AGG + chr4_1:87345588-87345607 Msa0581840:intron 35.0%
TTGGGTTTGGCACATAAAAT+AGG - chr4_1:87345752-87345771 None:intergenic 35.0%
! ATGAACTTTCAAGTGTAAGG+GGG - chr4_1:87345783-87345802 None:intergenic 35.0%
ATCAGTCCTCAACTATTAGT+AGG + chr4_1:87345871-87345890 Msa0581840:intron 35.0%
CATCATCCTACTAATAGTTG+AGG - chr4_1:87345880-87345899 None:intergenic 35.0%
CTCAACTATTAGTAGGATGA+TGG + chr4_1:87345878-87345897 Msa0581840:intron 35.0%
!!! TTTTTGTGCTGATTCAGAAC+GGG - chr4_1:87346195-87346214 None:intergenic 35.0%
!!! GTTTTTGTGCTGATTCAGAA+CGG - chr4_1:87346196-87346215 None:intergenic 35.0%
GTGGCAGAACCATTTAATAA+AGG - chr4_1:87346390-87346409 None:intergenic 35.0%
GTTATGGTAGTTGTATCAGT+TGG + chr4_1:87346446-87346465 Msa0581840:intron 35.0%
! AGACTGGTTGAACTTGAAAT+TGG + chr4_1:87346541-87346560 Msa0581840:intron 35.0%
! GACTGGTTGAACTTGAAATT+GGG + chr4_1:87346542-87346561 Msa0581840:intron 35.0%
! CATTTCACGCATTTTGTGAT+AGG + chr4_1:87346631-87346650 Msa0581840:intron 35.0%
TGCCTAACACACAAAAATGA+AGG - chr4_1:87346671-87346690 None:intergenic 35.0%
!! AATGGCCTTGAATTTTCTTG+CGG - chr4_1:87346849-87346868 None:intergenic 35.0%
GTTTGCAAAATAGAGATCGT+TGG - chr4_1:87346917-87346936 None:intergenic 35.0%
TAGAAGAGGTAAACCTATTG+TGG + chr4_1:87346967-87346986 Msa0581840:intron 35.0%
TGCTGTGGTAAATGTTTGTA+TGG - chr4_1:87347021-87347040 None:intergenic 35.0%
ATTTACCACAGCAACGAAAT+GGG + chr4_1:87347028-87347047 Msa0581840:intron 35.0%
!! CAAAAGTTGGTGTCAAATAG+TGG + chr4_1:87347342-87347361 Msa0581840:intron 35.0%
! GTATAGGTTGGAGTTACAAT+GGG - chr4_1:87347474-87347493 None:intergenic 35.0%
! AGTATAGGTTGGAGTTACAA+TGG - chr4_1:87347475-87347494 None:intergenic 35.0%
TTACCATCTTGAGAAACTTG+CGG - chr4_1:87347602-87347621 None:intergenic 35.0%
CCACATGAGAAATCATAGAT+TGG - chr4_1:87347708-87347727 None:intergenic 35.0%
CCAATCTATGATTTCTCATG+TGG + chr4_1:87347705-87347724 Msa0581840:CDS 35.0%
!!! ACCAAAGGCATTCTTTTTTG+AGG + chr4_1:87347854-87347873 Msa0581840:CDS 35.0%
ACCTCAAAAAAGAATGCCTT+TGG - chr4_1:87347858-87347877 None:intergenic 35.0%
ACTATTCAGAAATTCCTTCG+TGG + chr4_1:87347994-87348013 Msa0581840:CDS 35.0%
! GTTTTCTCAATAACCACCTA+CGG - chr4_1:87348212-87348231 None:intergenic 35.0%
!!! GTCATTCAATCTTTTTTCCG+TGG + chr4_1:87348339-87348358 Msa0581840:CDS 35.0%
!!! TTCAATCTTTTTTCCGTGGA+TGG + chr4_1:87348343-87348362 Msa0581840:CDS 35.0%
GTAAAACCTCAGAAAATGCA+AGG - chr4_1:87348701-87348720 None:intergenic 35.0%
TGCAATTTGAATGATTCCAG+AGG + chr4_1:87348738-87348757 Msa0581840:intron 35.0%
! ATAACCTAATAGCCGATTTC+GGG - chr4_1:87348921-87348940 None:intergenic 35.0%
CATGAGATAATAATGTTGGC+AGG - chr4_1:87349002-87349021 None:intergenic 35.0%
TATATATCTAATGCGGGACT+TGG - chr4_1:87349487-87349506 None:intergenic 35.0%
AATAGGCCCAAATTTCAACA+TGG + chr4_1:87349544-87349563 Msa0581840:intron 35.0%
TCTTCCTATCTATCCAATGT+GGG - chr4_1:87349643-87349662 None:intergenic 35.0%
GAGAGAAAATTGATGTCTAG+AGG + chr4_1:87349742-87349761 Msa0581840:intron 35.0%
!! CTAGAGGTCGAAATTTGTTA+TGG + chr4_1:87349758-87349777 Msa0581840:intron 35.0%
CTGTGTTAGTTAGAGAGTTA+GGG - chr4_1:87349800-87349819 None:intergenic 35.0%
TGAAAACTACAAAAGCCAGT+TGG - chr4_1:87350226-87350245 None:intergenic 35.0%
! TGGCTTTTGTAGTTTTCAGT+TGG + chr4_1:87350228-87350247 Msa0581840:CDS 35.0%
AAGTAGTGAAATTGCAACGA+TGG + chr4_1:87350266-87350285 Msa0581840:CDS 35.0%
TGATTTACATCGCACTTTCA+CGG + chr4_1:87350509-87350528 Msa0581840:intron 35.0%
! GAAAGGGAACATCTGTTTTA+GGG - chr4_1:87350551-87350570 None:intergenic 35.0%
! AGAAAGGGAACATCTGTTTT+AGG - chr4_1:87350552-87350571 None:intergenic 35.0%
TTGCCTATTTAAGGGAGAAA+GGG - chr4_1:87350567-87350586 None:intergenic 35.0%
TTTGCCTATTTAAGGGAGAA+AGG - chr4_1:87350568-87350587 None:intergenic 35.0%
CTACTTCGTTTGCCTATTTA+AGG - chr4_1:87350576-87350595 None:intergenic 35.0%
TGTGTGGGTAACATGAAAAT+TGG + chr4_1:87350678-87350697 Msa0581840:intron 35.0%
GTGTGGGTAACATGAAAATT+GGG + chr4_1:87350679-87350698 Msa0581840:intron 35.0%
! TGTAACTTGCAAGACACTTA+AGG - chr4_1:87350772-87350791 None:intergenic 35.0%
TCAAGAGTCTTCCAAAAATG+TGG + chr4_1:87350984-87351003 Msa0581840:CDS 35.0%
! TTTTTGCAGATTTGGCAACA+TGG + chr4_1:87351260-87351279 Msa0581840:intron 35.0%
TTCTATACAGACAATCGTCT+TGG + chr4_1:87351462-87351481 Msa0581840:CDS 35.0%
! AACTTGTTTCAGGAATAAGG+AGG + chr4_1:87351569-87351588 Msa0581840:intron 35.0%
TGCCTAAATGCAGAAATGTT+CGG + chr4_1:87351838-87351857 Msa0581840:intron 35.0%
ACAATAACTGAACTAGGAGT+AGG - chr4_1:87351867-87351886 None:intergenic 35.0%
TGCACATAGCATTAATTGAC+TGG - chr4_1:87351965-87351984 None:intergenic 35.0%
AAAATCCACAAGATGAGGAA+AGG - chr4_1:87352009-87352028 None:intergenic 35.0%
! TTTCCTCATCTTGTGGATTT+TGG + chr4_1:87352008-87352027 Msa0581840:three_prime_UTR 35.0%
AGGGAAATTGCTTAACATTC+TGG + chr4_1:87352031-87352050 Msa0581840:three_prime_UTR 35.0%
GTAGAACTGCTTATTGTCAT+TGG + chr4_1:87352146-87352165 Msa0581840:three_prime_UTR 35.0%
TGACTGCTTATTGTCATAGT+TGG + chr4_1:87352185-87352204 Msa0581840:three_prime_UTR 35.0%
! TTGGGTATTGTTCAGTTCAG+AGG - chr4_1:87340904-87340923 None:intergenic 40.0%
AGAAGTGAAGAAGAGCGAAA+AGG - chr4_1:87341030-87341049 None:intergenic 40.0%
! GGGAAACGTGATAATGTTTC+AGG + chr4_1:87341420-87341439 Msa0581840:intron 40.0%
! CAGTTGGAGTTGATTCTACT+TGG + chr4_1:87341448-87341467 Msa0581840:CDS 40.0%
! TTCATCGTTTTCACGCTTGA+AGG + chr4_1:87341560-87341579 Msa0581840:CDS 40.0%
! GCTTCGATGATTTTAAGCAG+CGG + chr4_1:87341604-87341623 Msa0581840:CDS 40.0%
ATCAGACGATTGATGAAGGA+AGG + chr4_1:87342064-87342083 Msa0581840:intron 40.0%
AACCCTAAATCCGTCACTAT+CGG - chr4_1:87342111-87342130 None:intergenic 40.0%
! GGATTTAGGGTTGAAGGATA+AGG + chr4_1:87342119-87342138 Msa0581840:CDS 40.0%
GGGACTCTTTAGTGTCAAAT+GGG + chr4_1:87342208-87342227 Msa0581840:CDS 40.0%
GGACTCTTTAGTGTCAAATG+GGG + chr4_1:87342209-87342228 Msa0581840:CDS 40.0%
TCTTTAGTGTCAAATGGGGA+TGG + chr4_1:87342213-87342232 Msa0581840:CDS 40.0%
GTTGAAGGAGTTTATAGGTC+TGG + chr4_1:87342333-87342352 Msa0581840:CDS 40.0%
CGTCAATACCATACTCAATC+GGG - chr4_1:87342446-87342465 None:intergenic 40.0%
CCGTCAATACCATACTCAAT+CGG - chr4_1:87342447-87342466 None:intergenic 40.0%
! CCGATTGAGTATGGTATTGA+CGG + chr4_1:87342444-87342463 Msa0581840:CDS 40.0%
AGGCAATCTTCTAACACATC+TGG + chr4_1:87342667-87342686 Msa0581840:CDS 40.0%
TGTGCTCATTTACTTGTGTG+AGG + chr4_1:87342743-87342762 Msa0581840:intron 40.0%
AGATGTTGCAGATATGCAGA+TGG - chr4_1:87342799-87342818 None:intergenic 40.0%
! TATGCTGTCGTTTGTGAAGA+AGG + chr4_1:87342875-87342894 Msa0581840:intron 40.0%
! ATGCTGTCGTTTGTGAAGAA+GGG + chr4_1:87342876-87342895 Msa0581840:intron 40.0%
CGGAAATCATACTCAACAAG+AGG - chr4_1:87342969-87342988 None:intergenic 40.0%
! TTTTTCTTACGGGTGTCAGA+AGG - chr4_1:87343176-87343195 None:intergenic 40.0%
!! CGGCTAGTCTAAGATATTGT+AGG - chr4_1:87343220-87343239 None:intergenic 40.0%
! ACAATATCTTAGACTAGCCG+GGG + chr4_1:87343220-87343239 Msa0581840:CDS 40.0%
! GGGAAATTGTGTTACTAACC+AGG - chr4_1:87343478-87343497 None:intergenic 40.0%
TAGCTGCGATTCCAATGAAA+CGG - chr4_1:87343499-87343518 None:intergenic 40.0%
!! CGGTTCAAATTCTAGTTCTC+TGG + chr4_1:87343712-87343731 Msa0581840:CDS 40.0%
AGGGTAGATGAAAAGATACG+TGG - chr4_1:87343768-87343787 None:intergenic 40.0%
GTGAATTGTGTGTGGGTATT+GGG - chr4_1:87343865-87343884 None:intergenic 40.0%
AGTGAATTGTGTGTGGGTAT+TGG - chr4_1:87343866-87343885 None:intergenic 40.0%
CAGTAGAGTGAATTGTGTGT+GGG - chr4_1:87343872-87343891 None:intergenic 40.0%
TGTCAACTGGGCAGTTATAA+TGG - chr4_1:87344307-87344326 None:intergenic 40.0%
GGGAGTGAAAATTGTCAACT+GGG - chr4_1:87344319-87344338 None:intergenic 40.0%
AGGGAGTGAAAATTGTCAAC+TGG - chr4_1:87344320-87344339 None:intergenic 40.0%
GATTGCTTTGCCATCAACAA+GGG - chr4_1:87344339-87344358 None:intergenic 40.0%
AGATTGCTTTGCCATCAACA+AGG - chr4_1:87344340-87344359 None:intergenic 40.0%
!! TTGTTGATGGCAAAGCAATC+TGG + chr4_1:87344339-87344358 Msa0581840:CDS 40.0%
AGACATTGTGAAGTTCCTTC+TGG - chr4_1:87344385-87344404 None:intergenic 40.0%
TCACAATGTCTGTTCGTTGA+AGG + chr4_1:87344394-87344413 Msa0581840:CDS 40.0%
CTAGTAACGTGGTCAATTTC+TGG - chr4_1:87344579-87344598 None:intergenic 40.0%
CAGAAATTGACCACGTTACT+AGG + chr4_1:87344577-87344596 Msa0581840:CDS 40.0%
AGGAAAATTCCCTAGTAACG+TGG - chr4_1:87344590-87344609 None:intergenic 40.0%
! GTTACTAGGGAATTTTCCTG+AGG + chr4_1:87344591-87344610 Msa0581840:CDS 40.0%
!! TAATGGGTTTGAAACAGGAC+TGG - chr4_1:87344764-87344783 None:intergenic 40.0%
GTCCTGTTTCAAACCCATTA+AGG + chr4_1:87344764-87344783 Msa0581840:intron 40.0%
ATTTGTATCCCTCGAGAACA+GGG - chr4_1:87344806-87344825 None:intergenic 40.0%
AATTTGTATCCCTCGAGAAC+AGG - chr4_1:87344807-87344826 None:intergenic 40.0%
AAACTTTGGGCTGATTAAGG+AGG + chr4_1:87344957-87344976 Msa0581840:intron 40.0%
CATTTCCGTAGTTGTGTTGT+AGG + chr4_1:87344986-87345005 Msa0581840:intron 40.0%
CACAACCTACAACACAACTA+CGG - chr4_1:87344994-87345013 None:intergenic 40.0%
GTAGTTGTGTTGTAGGTTGT+GGG + chr4_1:87344993-87345012 Msa0581840:intron 40.0%
!! CGTTGGTCCTAAGCTATTTT+TGG + chr4_1:87345361-87345380 Msa0581840:intron 40.0%
GCTTAAATTCTTAGGTCACC+AGG + chr4_1:87345402-87345421 Msa0581840:intron 40.0%
ATAGCTTATTTGGACATGCC+TGG - chr4_1:87345423-87345442 None:intergenic 40.0%
GACAGAAGTTGAATCTGCTT+GGG - chr4_1:87345475-87345494 None:intergenic 40.0%
AGACAGAAGTTGAATCTGCT+TGG - chr4_1:87345476-87345495 None:intergenic 40.0%
GATTCAACTTCTGTCTTGTC+TGG + chr4_1:87345480-87345499 Msa0581840:intron 40.0%
! TGAACTTTCAAGTGTAAGGG+GGG - chr4_1:87345782-87345801 None:intergenic 40.0%
!! GGTGATATTGGTTGTTTTCC+TGG + chr4_1:87345980-87345999 Msa0581840:CDS 40.0%
! AGTTCCTGCGATTTGTGTTT+TGG - chr4_1:87346151-87346170 None:intergenic 40.0%
TCACCCACATCTGAATCATA+AGG - chr4_1:87346218-87346237 None:intergenic 40.0%
!! AAGGTTTGTTGTCGACTCTT+TGG + chr4_1:87346243-87346262 Msa0581840:intron 40.0%
!! TATTCAGAAGTTGGTGACAG+TGG - chr4_1:87346409-87346428 None:intergenic 40.0%
AGATGCCGCAAGAAAATTCA+AGG + chr4_1:87346841-87346860 Msa0581840:intron 40.0%
AATTCAAGGCCATTCAGACT+TGG + chr4_1:87346855-87346874 Msa0581840:CDS 40.0%
ACAGGTAAGAAAGCCACAAT+AGG - chr4_1:87346983-87347002 None:intergenic 40.0%
TGGTGACATAGTAGCAAAAC+AGG - chr4_1:87347001-87347020 None:intergenic 40.0%
CATTTACCACAGCAACGAAA+TGG + chr4_1:87347027-87347046 Msa0581840:intron 40.0%
! TTTTTCCCATTTCGTTGCTG+TGG - chr4_1:87347036-87347055 None:intergenic 40.0%
ACAATACAATCACATGTCCG+AGG + chr4_1:87347564-87347583 Msa0581840:CDS 40.0%
TCTGAAAACGGTCTGCAAAA+GGG - chr4_1:87347634-87347653 None:intergenic 40.0%
!! TTTCAGCCAAGCTCTGAAAA+CGG - chr4_1:87347646-87347665 None:intergenic 40.0%
GTCTGCATGATATTCACTAC+TGG + chr4_1:87347681-87347700 Msa0581840:CDS 40.0%
GACGTACTTCTCGTATACTT+CGG - chr4_1:87347824-87347843 None:intergenic 40.0%
! ACGTCATGCTTTTCTACCAA+AGG + chr4_1:87347839-87347858 Msa0581840:CDS 40.0%
TTCAGAAATTCCTTCGTGGT+TGG + chr4_1:87347998-87348017 Msa0581840:intron 40.0%
CTTAAAACAAAGGCAGCCAT+TGG + chr4_1:87348102-87348121 Msa0581840:CDS 40.0%
ACATATGCTGCAAGTCTACT+AGG + chr4_1:87348148-87348167 Msa0581840:CDS 40.0%
TTCAGTGTAATTTCCGTAGG+TGG + chr4_1:87348196-87348215 Msa0581840:intron 40.0%
GAACTTCAAAACCATGTCCA+AGG + chr4_1:87348308-87348327 Msa0581840:CDS 40.0%
TTGAATGACAATAGCAGCCT+TGG - chr4_1:87348328-87348347 None:intergenic 40.0%
! GTCCAACAAAGAGCTGATTT+GGG - chr4_1:87348599-87348618 None:intergenic 40.0%
AGTCCAACAAAGAGCTGATT+TGG - chr4_1:87348600-87348619 None:intergenic 40.0%
! GAAATGCCTTGCATTTTCTG+AGG + chr4_1:87348692-87348711 Msa0581840:intron 40.0%
TCTGACAATTGAGTGTCTTC+TGG - chr4_1:87348853-87348872 None:intergenic 40.0%
TTAACCCGAAATCGGCTATT+AGG + chr4_1:87348914-87348933 Msa0581840:CDS 40.0%
TGAAAACTACATAAGCCAGC+TGG - chr4_1:87349086-87349105 None:intergenic 40.0%
TCGCAGTAGTGAAATTGCAA+CGG + chr4_1:87349123-87349142 Msa0581840:CDS 40.0%
!! GCTCATGGTAATTTTGAGTG+AGG + chr4_1:87349366-87349385 Msa0581840:intron 40.0%
CCTATTTGTCTTGTAAGGTG+AGG - chr4_1:87349530-87349549 None:intergenic 40.0%
CCTCACCTTACAAGACAAAT+AGG + chr4_1:87349527-87349546 Msa0581840:intron 40.0%
TTGGGCCTATTTGTCTTGTA+AGG - chr4_1:87349535-87349554 None:intergenic 40.0%
AAGTCCCACATTGGATAGAT+AGG + chr4_1:87349636-87349655 Msa0581840:intron 40.0%
CTCTTCCTATCTATCCAATG+TGG - chr4_1:87349644-87349663 None:intergenic 40.0%
GCTGTGTTAGTTAGAGAGTT+AGG - chr4_1:87349801-87349820 None:intergenic 40.0%
AGCTACAACCAATTTGGGTA+GGG + chr4_1:87349850-87349869 Msa0581840:intron 40.0%
GGATGCATTTCAAAACCAAC+TGG + chr4_1:87350208-87350227 Msa0581840:CDS 40.0%
TAGTGAAATTGCAACGATGG+TGG + chr4_1:87350269-87350288 Msa0581840:CDS 40.0%
ATTATTCAGTCCCACATTCG+TGG + chr4_1:87350334-87350353 Msa0581840:CDS 40.0%
TTATTCAGTCCCACATTCGT+GGG + chr4_1:87350335-87350354 Msa0581840:CDS 40.0%
GCATCATATCGTTGTCATAC+AGG + chr4_1:87350390-87350409 Msa0581840:CDS 40.0%
TATCATCATATACCCCACTG+TGG + chr4_1:87350441-87350460 Msa0581840:intron 40.0%
GTTCCCTTTCTCCCTTAAAT+AGG + chr4_1:87350561-87350580 Msa0581840:intron 40.0%
ATAGGCAAACGAAGTAGCAA+TGG + chr4_1:87350579-87350598 Msa0581840:intron 40.0%
TAAAACCAGTGGAAGAGTCT+AGG - chr4_1:87350638-87350657 None:intergenic 40.0%
! ATTTTGTAGTCCCACTGGAA+AGG + chr4_1:87350907-87350926 Msa0581840:intron 40.0%
!! CTTGCTGTCATCCACATTTT+TGG - chr4_1:87350998-87351017 None:intergenic 40.0%
! TGCTCCGATTCTATTTTGCA+AGG + chr4_1:87351140-87351159 Msa0581840:intron 40.0%
GAGATGTTGTGAAGAACTTG+TGG + chr4_1:87351291-87351310 Msa0581840:CDS 40.0%
GGCTTATTCGATTAATCAGC+AGG + chr4_1:87351341-87351360 Msa0581840:CDS 40.0%
!! GCTTTAGAACCTCTTGATCA+GGG - chr4_1:87351372-87351391 None:intergenic 40.0%
!! TGCTTTAGAACCTCTTGATC+AGG - chr4_1:87351373-87351392 None:intergenic 40.0%
!! AGAAGTGCTGATACAAAGAC+AGG + chr4_1:87351438-87351457 Msa0581840:CDS 40.0%
!! GAAGTGCTGATACAAAGACA+GGG + chr4_1:87351439-87351458 Msa0581840:CDS 40.0%
TTGTTTCAGGAATAAGGAGG+AGG + chr4_1:87351572-87351591 Msa0581840:intron 40.0%
TGTTTCAGGAATAAGGAGGA+GGG + chr4_1:87351573-87351592 Msa0581840:intron 40.0%
AAAGGCAGGAGATTTGAGTA+TGG - chr4_1:87351658-87351677 None:intergenic 40.0%
! ACTGTGCAGTCTCTTTAGAA+AGG - chr4_1:87351676-87351695 None:intergenic 40.0%
GCCTAAATGCAGAAATGTTC+GGG + chr4_1:87351839-87351858 Msa0581840:intron 40.0%
CCTAAATGCAGAAATGTTCG+GGG + chr4_1:87351840-87351859 Msa0581840:intron 40.0%
CACAGATAGAAGATTGAAGG+AGG + chr4_1:87351896-87351915 Msa0581840:CDS 40.0%
! CTCATCTTGTGGATTTTGGA+GGG + chr4_1:87352012-87352031 Msa0581840:three_prime_UTR 40.0%
CAAATGGTTGTGTGTTCGTG+TGG - chr4_1:87340862-87340881 None:intergenic 45.0%
!! AAAGGTGAAGGTGATGGACA+TGG - chr4_1:87341012-87341031 None:intergenic 45.0%
GAAGAAGAGCGAAAAGGTGA+AGG - chr4_1:87341024-87341043 None:intergenic 45.0%
! AAGAAGAAGAAGCGCGTTTG+GGG - chr4_1:87341077-87341096 None:intergenic 45.0%
! GAAGAAGAAGAAGCGCGTTT+GGG - chr4_1:87341078-87341097 None:intergenic 45.0%
! AGAAGAAGAAGAAGCGCGTT+TGG - chr4_1:87341079-87341098 None:intergenic 45.0%
GCGGTGAAGAATTGAGTTTG+AGG - chr4_1:87341123-87341142 None:intergenic 45.0%
GGTGTGTTTGGATTTGGAAG+CGG - chr4_1:87341142-87341161 None:intergenic 45.0%
! TGTGGTGGTGTGTTTGGATT+TGG - chr4_1:87341148-87341167 None:intergenic 45.0%
TAGCCAAATCGCTCACTGTT+TGG + chr4_1:87341301-87341320 Msa0581840:CDS 45.0%
AAGCCAAACAGTGAGCGATT+TGG - chr4_1:87341307-87341326 None:intergenic 45.0%
AAGAAGCAGGTGATTCGAGA+AGG - chr4_1:87341335-87341354 None:intergenic 45.0%
! GTTGTCTTCCTCTGTCGTTT+CGG - chr4_1:87341480-87341499 None:intergenic 45.0%
! ACAACTTCTTCGTCGCGTTT+TGG + chr4_1:87341504-87341523 Msa0581840:CDS 45.0%
!! TTCTTCGTCGCGTTTTGGTA+AGG + chr4_1:87341509-87341528 Msa0581840:CDS 45.0%
ACGCTTGAAGGATTCGTTGA+AGG + chr4_1:87341572-87341591 Msa0581840:CDS 45.0%
AGAGTAGTGTACATGGATGG+AGG + chr4_1:87341889-87341908 Msa0581840:intron 45.0%
GAGTAGTGTACATGGATGGA+GGG + chr4_1:87341890-87341909 Msa0581840:intron 45.0%
! ACATGGATGGAGGGTACAAT+TGG + chr4_1:87341899-87341918 Msa0581840:intron 45.0%
ACCCTAAATCCGTCACTATC+GGG - chr4_1:87342110-87342129 None:intergenic 45.0%
!! AGTGACGGATTTAGGGTTGA+AGG + chr4_1:87342113-87342132 Msa0581840:CDS 45.0%
! AATCCAAGTTGGCTGCGAAT+CGG + chr4_1:87342165-87342184 Msa0581840:CDS 45.0%
GGGGACTCTTTAGTGTCAAA+TGG + chr4_1:87342207-87342226 Msa0581840:CDS 45.0%
CAATACCATACTCAATCGGG+AGG - chr4_1:87342443-87342462 None:intergenic 45.0%
!! TGAGTATGGTATTGACGGAC+TGG + chr4_1:87342449-87342468 Msa0581840:CDS 45.0%
!! TATGGTATTGACGGACTGGA+CGG + chr4_1:87342453-87342472 Msa0581840:CDS 45.0%
TTGACTGCTTGCTTTAACCC+AGG - chr4_1:87342508-87342527 None:intergenic 45.0%
CTGTCATCTGATGTAATGCG+CGG + chr4_1:87342641-87342660 Msa0581840:CDS 45.0%
GAACATGTTCGTTCACTTGC+AGG + chr4_1:87343328-87343347 Msa0581840:CDS 45.0%
AGCTGCGATTCCAATGAAAC+GGG - chr4_1:87343498-87343517 None:intergenic 45.0%
AAAAATTCGCGGACTTGGCA+CGG + chr4_1:87343560-87343579 Msa0581840:CDS 45.0%
ACCTTACAGGAACTCATGAC+CGG + chr4_1:87343692-87343711 Msa0581840:intron 45.0%
GCAGTAGAGTGAATTGTGTG+TGG - chr4_1:87343873-87343892 None:intergenic 45.0%
!! GCTGACTTGCATGCATATGA+TGG + chr4_1:87344631-87344650 Msa0581840:intron 45.0%
TTTGTATCCCTCGAGAACAG+GGG - chr4_1:87344805-87344824 None:intergenic 45.0%
CGTAGTTGTGTTGTAGGTTG+TGG + chr4_1:87344992-87345011 Msa0581840:intron 45.0%
TTGTGTTGTAGGTTGTGGGA+TGG + chr4_1:87344997-87345016 Msa0581840:intron 45.0%
TGTGTTGTAGGTTGTGGGAT+GGG + chr4_1:87344998-87345017 Msa0581840:intron 45.0%
AGTCATCGGATGAGTCAGTT+GGG - chr4_1:87345243-87345262 None:intergenic 45.0%
! GAACTTTCAAGTGTAAGGGG+GGG - chr4_1:87345781-87345800 None:intergenic 45.0%
CGATCGAAGTGTGGTGATAT+TGG + chr4_1:87345968-87345987 Msa0581840:CDS 45.0%
!! TGACAAATAACTGGCTTGCC+AGG - chr4_1:87346001-87346020 None:intergenic 45.0%
GGCAAGCCAGTTATTTGTCA+AGG + chr4_1:87346001-87346020 Msa0581840:CDS 45.0%
ACTGCCAAAACACAAATCGC+AGG + chr4_1:87346144-87346163 Msa0581840:CDS 45.0%
ACACAAATCGCAGGAACTTG+AGG + chr4_1:87346153-87346172 Msa0581840:CDS 45.0%
AAATCGCAGGAACTTGAGGA+CGG + chr4_1:87346157-87346176 Msa0581840:CDS 45.0%
TCAGATGTGGGTGACAATGA+AGG + chr4_1:87346224-87346243 Msa0581840:CDS 45.0%
!! GTTTGTTGTCGACTCTTTGG+TGG + chr4_1:87346246-87346265 Msa0581840:intron 45.0%
ATCTTGCCACCAAGTCTGAA+TGG - chr4_1:87346867-87346886 None:intergenic 45.0%
!! TCAGACTTGGTGGCAAGATA+TGG + chr4_1:87346868-87346887 Msa0581840:CDS 45.0%
TGCAACACTTCCGTTAGAAG+AGG + chr4_1:87346953-87346972 Msa0581840:CDS 45.0%
! CTCTGAAAACGGTCTGCAAA+AGG - chr4_1:87347635-87347654 None:intergenic 45.0%
!! CAGTGAGGAGTTGGTTCTAT+TGG + chr4_1:87347908-87347927 Msa0581840:CDS 45.0%
!! TGAGGAGTTGGTTCTATTGG+AGG + chr4_1:87347911-87347930 Msa0581840:CDS 45.0%
TTCTATTGGAGGTCTCGACA+AGG + chr4_1:87347922-87347941 Msa0581840:CDS 45.0%
GAAATTCCTTCGTGGTTGGA+TGG + chr4_1:87348002-87348021 Msa0581840:intron 45.0%
ATGCTGCAAGTCTACTAGGA+AGG + chr4_1:87348152-87348171 Msa0581840:CDS 45.0%
!!! TTTTCCGTGGATGGATTGCT+CGG + chr4_1:87348352-87348371 Msa0581840:CDS 45.0%
GTCCCAAATCAGCTCTTTGT+TGG + chr4_1:87348594-87348613 Msa0581840:intron 45.0%
TTGTCAGAAAGATGCTGCAC+TGG + chr4_1:87348865-87348884 Msa0581840:CDS 45.0%
GGGGACATTTAACCCGAAAT+CGG + chr4_1:87348906-87348925 Msa0581840:CDS 45.0%
AGTTGCATTTCAAGACCAGC+TGG + chr4_1:87349068-87349087 Msa0581840:CDS 45.0%
CAGTAGTGAAATTGCAACGG+TGG + chr4_1:87349126-87349145 Msa0581840:CDS 45.0%
TAGTGAAATTGCAACGGTGG+TGG + chr4_1:87349129-87349148 Msa0581840:CDS 45.0%
!! AAATTGCAACGGTGGTGGAA+GGG + chr4_1:87349134-87349153 Msa0581840:CDS 45.0%
TTCAATCTTGTACTCGTGGG+TGG + chr4_1:87349198-87349217 Msa0581840:CDS 45.0%
! GGTGTCAAAGCCTATCGATT+CGG + chr4_1:87349565-87349584 Msa0581840:intron 45.0%
!! GTGTCAAAGCCTATCGATTC+GGG + chr4_1:87349566-87349585 Msa0581840:intron 45.0%
TCTATCCAATGTGGGACTTG+TGG - chr4_1:87349635-87349654 None:intergenic 45.0%
GAGCTACAACCAATTTGGGT+AGG + chr4_1:87349849-87349868 Msa0581840:intron 45.0%
TAAGGCAACCCTACCCAAAT+TGG - chr4_1:87349861-87349880 None:intergenic 45.0%
AATACACGAGAACCACAGTG+GGG - chr4_1:87350456-87350475 None:intergenic 45.0%
GAATACACGAGAACCACAGT+GGG - chr4_1:87350457-87350476 None:intergenic 45.0%
AGAATACACGAGAACCACAG+TGG - chr4_1:87350458-87350477 None:intergenic 45.0%
!!! TCCACTGGTTTTATTGCACC+AGG + chr4_1:87350645-87350664 Msa0581840:intron 45.0%
ACCTGGTGCAATAAAACCAG+TGG - chr4_1:87350649-87350668 None:intergenic 45.0%
! ACCAGGTTGCTCTTTTTGTG+TGG + chr4_1:87350662-87350681 Msa0581840:intron 45.0%
! CCAGGTTGCTCTTTTTGTGT+GGG + chr4_1:87350663-87350682 Msa0581840:intron 45.0%
CCAGTTACAATCAGAACCTG+CGG - chr4_1:87350815-87350834 None:intergenic 45.0%
TGCAACGTAACCTTTCCAGT+GGG - chr4_1:87350920-87350939 None:intergenic 45.0%
TAATCGAATAAGCCGCAGCA+AGG - chr4_1:87351335-87351354 None:intergenic 45.0%
GAGGATAGCGAGCAAGATTT+CGG - chr4_1:87351411-87351430 None:intergenic 45.0%
ATCAGCACTTCTAGCAGATG+AGG - chr4_1:87351430-87351449 None:intergenic 45.0%
CAATCGTCTTGGAGTTACTG+AGG + chr4_1:87351473-87351492 Msa0581840:CDS 45.0%
! TGCAGTCTCTTTAGAAAGGC+AGG - chr4_1:87351672-87351691 None:intergenic 45.0%
! GTCTTGTTGAGGAGCTTACT+AGG + chr4_1:87351694-87351713 Msa0581840:CDS 45.0%
TGTTGAGGAGCTTACTAGGA+AGG + chr4_1:87351698-87351717 Msa0581840:CDS 45.0%
!! GTGTGACCTTTTCTGGTAAG+TGG - chr4_1:87351724-87351743 None:intergenic 45.0%
CCAGAAAAGGTCACACACTT+CGG + chr4_1:87351728-87351747 Msa0581840:intron 45.0%
CCCCGAACATTTCTGCATTT+AGG - chr4_1:87351843-87351862 None:intergenic 45.0%
TGCATCCTTTCCTCATCTTG+TGG + chr4_1:87352001-87352020 Msa0581840:three_prime_UTR 45.0%
CCTCCAAAATCCACAAGATG+AGG - chr4_1:87352014-87352033 None:intergenic 45.0%
! CCTCATCTTGTGGATTTTGG+AGG + chr4_1:87352011-87352030 Msa0581840:three_prime_UTR 45.0%
CAACACCCTAAGCTCTTAGT+GGG + chr4_1:87352091-87352110 Msa0581840:three_prime_UTR 45.0%
!! AGAAAATAAAAAAATAAAAA+AGG - chr4_1:87343370-87343389 None:intergenic 5.0%
!! AAATAAAAAAATACTATATA+TGG + chr4_1:87347056-87347075 Msa0581840:intron 5.0%
!! TTTAAAAGTTAAATATTATA+AGG - chr4_1:87351550-87351569 None:intergenic 5.0%
GTTAACGTTGGGATTTGGGC+TGG + chr4_1:87340814-87340833 Msa0581840:intron 50.0%
TGTGTTCGTGTGGAGGAAAG+CGG - chr4_1:87340852-87340871 None:intergenic 50.0%
ATGGTTGTGTGTTCGTGTGG+AGG - chr4_1:87340859-87340878 None:intergenic 50.0%
GAGCGAAAAGGTGAAGGTGA+TGG - chr4_1:87341018-87341037 None:intergenic 50.0%
! AGAAGAAGAAGCGCGTTTGG+GGG - chr4_1:87341076-87341095 None:intergenic 50.0%
CTCGAATCACCTGCTTCTTG+CGG + chr4_1:87341336-87341355 Msa0581840:CDS 50.0%
GGTTGCGATGTTTCAATCGC+CGG + chr4_1:87341357-87341376 Msa0581840:CDS 50.0%
! ACTCATCACCGGAGAAGCAT+CGG - chr4_1:87341397-87341416 None:intergenic 50.0%
TGCTTCTCCGGTGATGAGTA+AGG + chr4_1:87341398-87341417 Msa0581840:CDS 50.0%
GCTTCTCCGGTGATGAGTAA+GGG + chr4_1:87341399-87341418 Msa0581840:CDS 50.0%
CTTCTCCGGTGATGAGTAAG+GGG + chr4_1:87341400-87341419 Msa0581840:CDS 50.0%
CGTTTCCCCTTACTCATCAC+CGG - chr4_1:87341408-87341427 None:intergenic 50.0%
!! TGCCCGATAGTGACGGATTT+AGG + chr4_1:87342105-87342124 Msa0581840:CDS 50.0%
!! GCCCGATAGTGACGGATTTA+GGG + chr4_1:87342106-87342125 Msa0581840:CDS 50.0%
!! AAACCGATTCGCAGCCAACT+TGG - chr4_1:87342171-87342190 None:intergenic 50.0%
AGTTGCCTCCCGATTGAGTA+TGG + chr4_1:87342435-87342454 Msa0581840:CDS 50.0%
AGCAAGCAGTCAAGTGATCC+AGG + chr4_1:87342515-87342534 Msa0581840:CDS 50.0%
GCAAGCAGTCAAGTGATCCA+GGG + chr4_1:87342516-87342535 Msa0581840:CDS 50.0%
TCTGATGTAATGCGCGGAGA+AGG + chr4_1:87342647-87342666 Msa0581840:CDS 50.0%
TTCATCAAGTAGCGAGACCC+CGG - chr4_1:87343240-87343259 None:intergenic 50.0%
GGAATCGCAGCTACCTTTGT+TGG + chr4_1:87343506-87343525 Msa0581840:intron 50.0%
ACCGGTCATGAGTTCCTGTA+AGG - chr4_1:87343696-87343715 None:intergenic 50.0%
ACTCTACTGCCGACAGCTTA+TGG + chr4_1:87343883-87343902 Msa0581840:intron 50.0%
!!! TCGAGAACAGGGGCATTTTG+TGG - chr4_1:87344795-87344814 None:intergenic 50.0%
ACAAAATGCCCCTGTTCTCG+AGG + chr4_1:87344794-87344813 Msa0581840:intron 50.0%
CAAAATGCCCCTGTTCTCGA+GGG + chr4_1:87344795-87344814 Msa0581840:intron 50.0%
TTGGGCTGATTAAGGAGGAG+TGG + chr4_1:87344962-87344981 Msa0581840:intron 50.0%
GTCATCGGATGAGTCAGTTG+GGG - chr4_1:87345242-87345261 None:intergenic 50.0%
CAGTCATCGGATGAGTCAGT+TGG - chr4_1:87345244-87345263 None:intergenic 50.0%
!! GTGCTGATTCAGAACGGGAA+TGG - chr4_1:87346190-87346209 None:intergenic 50.0%
TCAAGGCCATTCAGACTTGG+TGG + chr4_1:87346858-87346877 Msa0581840:CDS 50.0%
ACAATCACATGTCCGAGGAC+TGG + chr4_1:87347569-87347588 Msa0581840:CDS 50.0%
ACGCCGCAAGTTTCTCAAGA+TGG + chr4_1:87347596-87347615 Msa0581840:CDS 50.0%
! TGCAGACCGTTTTCAGAGCT+TGG + chr4_1:87347637-87347656 Msa0581840:CDS 50.0%
TCAGAGCTTGGCTGAAAGTG+AGG + chr4_1:87347649-87347668 Msa0581840:CDS 50.0%
AGCTTATCCAGCAAGCAGTG+AGG + chr4_1:87347893-87347912 Msa0581840:CDS 50.0%
TCACAGTGTCTGCAGTCAAG+AGG - chr4_1:87347963-87347982 None:intergenic 50.0%
AAAGGCAGCCATTGGCATTC+AGG + chr4_1:87348110-87348129 Msa0581840:CDS 50.0%
CCAAGCAACCTGAATGCCAA+TGG - chr4_1:87348121-87348140 None:intergenic 50.0%
!! CCATTGGCATTCAGGTTGCT+TGG + chr4_1:87348118-87348137 Msa0581840:CDS 50.0%
GACAATAGCAGCCTTGGACA+TGG - chr4_1:87348322-87348341 None:intergenic 50.0%
TCTTCCGAGCAATCCATCCA+CGG - chr4_1:87348359-87348378 None:intergenic 50.0%
TCCGTTTCACAAGCCAACCA+CGG - chr4_1:87348769-87348788 None:intergenic 50.0%
TCAAACTTCGACTGACGCTC+TGG - chr4_1:87348826-87348845 None:intergenic 50.0%
TGGAGATCCAGCGCTTCATT+AGG + chr4_1:87348885-87348904 Msa0581840:CDS 50.0%
GGAGATCCAGCGCTTCATTA+GGG + chr4_1:87348886-87348905 Msa0581840:CDS 50.0%
GAGATCCAGCGCTTCATTAG+GGG + chr4_1:87348887-87348906 Msa0581840:CDS 50.0%
AATGTCCCCTAATGAAGCGC+TGG - chr4_1:87348895-87348914 None:intergenic 50.0%
GTGGTATAGGTAGTGCTTCC+AGG + chr4_1:87349024-87349043 Msa0581840:intron 50.0%
AGTATCAGCTGAACGCAACC+TGG - chr4_1:87349045-87349064 None:intergenic 50.0%
AGGTTGCGTTCAGCTGATAC+TGG + chr4_1:87349044-87349063 Msa0581840:CDS 50.0%
!! GAAATTGCAACGGTGGTGGA+AGG + chr4_1:87349133-87349152 Msa0581840:CDS 50.0%
GTTAGGTAGCCCGAATCGAT+AGG - chr4_1:87349578-87349597 None:intergenic 50.0%
CCAATGTGGGACTTGTGGTT+GGG - chr4_1:87349630-87349649 None:intergenic 50.0%
TCCAATGTGGGACTTGTGGT+TGG - chr4_1:87349631-87349650 None:intergenic 50.0%
CTAACACAACCCCACAGAAC+CGG - chr4_1:87349685-87349704 None:intergenic 50.0%
ACTGAAGGTTCGTAACTGCC+AGG + chr4_1:87349961-87349980 Msa0581840:intron 50.0%
TGGAGCTCCAGCGCTATATT+AGG + chr4_1:87349996-87350015 Msa0581840:CDS 50.0%
GGAGCTCCAGCGCTATATTA+GGG + chr4_1:87349997-87350016 Msa0581840:CDS 50.0%
GAGCTCCAGCGCTATATTAG+GGG + chr4_1:87349998-87350017 Msa0581840:CDS 50.0%
AGCTCCAGCGCTATATTAGG+GGG + chr4_1:87349999-87350018 Msa0581840:CDS 50.0%
AATGCCCCCTAATATAGCGC+TGG - chr4_1:87350006-87350025 None:intergenic 50.0%
AGTTACCCACCCACGAATGT+GGG - chr4_1:87350347-87350366 None:intergenic 50.0%
TAGTTACCCACCCACGAATG+TGG - chr4_1:87350348-87350367 None:intergenic 50.0%
ACATTCGTGGGTGGGTAACT+AGG + chr4_1:87350347-87350366 Msa0581840:CDS 50.0%
GGCGAAAGGCCGTTGTTTAT+AGG + chr4_1:87350368-87350387 Msa0581840:CDS 50.0%
CCAGTGGAAGAGTCTAGGAA+AGG - chr4_1:87350633-87350652 None:intergenic 50.0%
CCTTTCCTAGACTCTTCCAC+TGG + chr4_1:87350630-87350649 Msa0581840:intron 50.0%
CCCACACAAAAAGAGCAACC+TGG - chr4_1:87350666-87350685 None:intergenic 50.0%
! CCGCAGGTTCTGATTGTAAC+TGG + chr4_1:87350812-87350831 Msa0581840:intron 50.0%
GTGCAACGTAACCTTTCCAG+TGG - chr4_1:87350921-87350940 None:intergenic 50.0%
GCGTCTCATTAACAGACTCC+TGG + chr4_1:87351017-87351036 Msa0581840:CDS 50.0%
TGTGAAGAACTTGTGGCTGC+TGG + chr4_1:87351298-87351317 Msa0581840:CDS 50.0%
GTGAAGAACTTGTGGCTGCT+GGG + chr4_1:87351299-87351318 Msa0581840:CDS 50.0%
TGAAGAACTTGTGGCTGCTG+GGG + chr4_1:87351300-87351319 Msa0581840:CDS 50.0%
!! CAGGAGTATCCCTGATCAAG+AGG + chr4_1:87351360-87351379 Msa0581840:CDS 50.0%
!! GAGACTGCACAGTCTTGTTG+AGG + chr4_1:87351683-87351702 Msa0581840:CDS 50.0%
GGAAGGCCACTTACCAGAAA+AGG + chr4_1:87351715-87351734 Msa0581840:CDS 50.0%
! CCGAAGTGTGTGACCTTTTC+TGG - chr4_1:87351731-87351750 None:intergenic 50.0%
GCAACACCCTAAGCTCTTAG+TGG + chr4_1:87352090-87352109 Msa0581840:three_prime_UTR 50.0%
GAGCTCCCACTAAGAGCTTA+GGG - chr4_1:87352099-87352118 None:intergenic 50.0%
AGAGCTCCCACTAAGAGCTT+AGG - chr4_1:87352100-87352119 None:intergenic 50.0%
TGGGAGCTCTTCGACATAGT+GGG + chr4_1:87352110-87352129 Msa0581840:three_prime_UTR 50.0%
GTGTTCGTGTGGAGGAAAGC+GGG - chr4_1:87340851-87340870 None:intergenic 55.0%
ACATCGCAACCGCAAGAAGC+AGG - chr4_1:87341348-87341367 None:intergenic 55.0%
TGCGATGTTTCAATCGCCGG+TGG + chr4_1:87341360-87341379 Msa0581840:CDS 55.0%
ATCGGCGATCTGACTTCCAC+CGG - chr4_1:87341379-87341398 None:intergenic 55.0%
TCAGATCGCCGATGCTTCTC+CGG + chr4_1:87341386-87341405 Msa0581840:CDS 55.0%
GGAGAACTCCGAAACGACAG+AGG + chr4_1:87341469-87341488 Msa0581840:CDS 55.0%
GGCACATTGCCCGATAGTGA+CGG + chr4_1:87342098-87342117 Msa0581840:intron 55.0%
! TGTAAGGGGGGGTGCAGTTT+GGG - chr4_1:87345770-87345789 None:intergenic 55.0%
TGCTTGCAGCGATCGAAGTG+TGG + chr4_1:87345959-87345978 Msa0581840:CDS 55.0%
AGCTTGGCTGAAAGTGAGGC+AGG + chr4_1:87347653-87347672 Msa0581840:CDS 55.0%
GCTGAAAGTGAGGCAGGAGT+CGG + chr4_1:87347659-87347678 Msa0581840:CDS 55.0%
TCCAGCAAGCAGTGAGGAGT+TGG + chr4_1:87347899-87347918 Msa0581840:CDS 55.0%
ACCAACTCCTCACTGCTTGC+TGG - chr4_1:87347903-87347922 None:intergenic 55.0%
GTGTCTGCAGTCAAGAGGTC+AGG - chr4_1:87347958-87347977 None:intergenic 55.0%
ATCGTGCCATCCAACCACGA+AGG - chr4_1:87348011-87348030 None:intergenic 55.0%
!! TGATTCCAGAGGCATTGCCG+TGG + chr4_1:87348749-87348768 Msa0581840:intron 55.0%
!! GCCGTGGTTGGCTTGTGAAA+CGG + chr4_1:87348765-87348784 Msa0581840:CDS 55.0%
CTCAACTATGGCCTTCCGTC+TGG - chr4_1:87349228-87349247 None:intergenic 55.0%
!! GGCTTGGTGCGTGGATAGTT+AGG - chr4_1:87349595-87349614 None:intergenic 55.0%
GTGGTTGGGCCAGCACTATT+GGG - chr4_1:87349616-87349635 None:intergenic 55.0%
TGTGGTTGGGCCAGCACTAT+TGG - chr4_1:87349617-87349636 None:intergenic 55.0%
CCCAACCACAAGTCCCACAT+TGG + chr4_1:87349627-87349646 Msa0581840:intron 55.0%
GCACTCATCACCGTACAAGC+CGG + chr4_1:87349663-87349682 Msa0581840:intron 55.0%
! ACCGTACAAGCCGGTTCTGT+GGG + chr4_1:87349672-87349691 Msa0581840:intron 55.0%
CGGTTCTGTGGGGTTGTGTT+AGG + chr4_1:87349683-87349702 Msa0581840:intron 55.0%
! ATAGCGCTGGAGCTCCAATG+CGG - chr4_1:87349993-87350012 None:intergenic 55.0%
AAGCTACGTGCAGTTGCTGC+TGG + chr4_1:87350187-87350206 Msa0581840:CDS 55.0%
TTCAGTCCCACATTCGTGGG+TGG + chr4_1:87350338-87350357 Msa0581840:CDS 55.0%
TCAGTCCCACATTCGTGGGT+GGG + chr4_1:87350339-87350358 Msa0581840:CDS 55.0%
TGGGTGGGTAACTAGGCGAA+AGG + chr4_1:87350354-87350373 Msa0581840:CDS 55.0%
! AAGCCGCAGCAAGGTGTCAA+TGG - chr4_1:87351326-87351345 None:intergenic 55.0%
AGGTCACACACTTCGGCTCT+TGG + chr4_1:87351735-87351754 Msa0581840:intron 55.0%
GGTCACACACTTCGGCTCTT+GGG + chr4_1:87351736-87351755 Msa0581840:intron 55.0%
GTGGGAGCTCTTCGACATAG+TGG + chr4_1:87352109-87352128 Msa0581840:three_prime_UTR 55.0%
! CGGGAGTGTGGTGGTGTGTT+TGG - chr4_1:87341154-87341173 None:intergenic 60.0%
AACACACCACCACACTCCCG+AGG + chr4_1:87341154-87341173 Msa0581840:CDS 60.0%
TCTTTGAGCCTCGGCCTCCT+CGG - chr4_1:87341174-87341193 None:intergenic 60.0%
!! GGTATTGACGGACTGGACGG+TGG + chr4_1:87342456-87342475 Msa0581840:CDS 60.0%
! GTGTAAGGGGGGGTGCAGTT+TGG - chr4_1:87345771-87345790 None:intergenic 60.0%
TGCGGCGTACAACCAGTCCT+CGG - chr4_1:87347584-87347603 None:intergenic 60.0%
!! TCCAGAGGCATTGCCGTGGT+TGG + chr4_1:87348753-87348772 Msa0581840:intron 60.0%
CTCGTGGGTGGATAGCCAGA+CGG + chr4_1:87349210-87349229 Msa0581840:CDS 60.0%
TGGGTGGATAGCCAGACGGA+AGG + chr4_1:87349214-87349233 Msa0581840:CDS 60.0%
!! GCACTATTGGGCTTGGTGCG+TGG - chr4_1:87349604-87349623 None:intergenic 60.0%
CGCACCAAGCCCAATAGTGC+TGG + chr4_1:87349604-87349623 Msa0581840:intron 60.0%
TGGGCCAGCACTATTGGGCT+TGG - chr4_1:87349611-87349630 None:intergenic 60.0%
! CACCGTACAAGCCGGTTCTG+TGG + chr4_1:87349671-87349690 Msa0581840:intron 60.0%
!! CCCCACAGAACCGGCTTGTA+CGG - chr4_1:87349676-87349695 None:intergenic 60.0%
! CCGTACAAGCCGGTTCTGTG+GGG + chr4_1:87349673-87349692 Msa0581840:intron 60.0%
! CTGCCAGGAGTATGCCGCAT+TGG + chr4_1:87349976-87349995 Msa0581840:CDS 60.0%
GCTCCAATGCGGCATACTCC+TGG - chr4_1:87349982-87350001 None:intergenic 60.0%
!! GTAGCTCTGAAAGCGCTGCC+AGG - chr4_1:87351038-87351057 None:intergenic 60.0%
GGGCCATTGACACCTTGCTG+CGG + chr4_1:87351320-87351339 Msa0581840:CDS 60.0%
ACACCACCACACTCCCGAGG+AGG + chr4_1:87341157-87341176 Msa0581840:CDS 65.0%
CTTTGAGCCTCGGCCTCCTC+GGG - chr4_1:87341173-87341192 None:intergenic 65.0%
! GGGGGGGTGCAGTTTGGGTT+TGG - chr4_1:87345765-87345784 None:intergenic 65.0%
GCCAACCACGGCAATGCCTC+TGG - chr4_1:87348757-87348776 None:intergenic 65.0%
! CGGCCTCCTCGGGAGTGTGG+TGG - chr4_1:87341163-87341182 None:intergenic 75.0%
CCTCGGCCTCCTCGGGAGTG+TGG - chr4_1:87341166-87341185 None:intergenic 75.0%
CCACACTCCCGAGGAGGCCG+AGG + chr4_1:87341163-87341182 Msa0581840:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 87340805 87352221 87340805 ID=Msa0581840;Name=Msa0581840
chr4_1 mRNA 87340805 87352221 87340805 ID=Msa0581840-mRNA-1;Parent=Msa0581840;Name=Msa0581840-mRNA-1;_AED=0.09;_eAED=0.09;_QI=22|0.76|0.70|0.96|0.76|0.70|27|268|1455
chr4_1 exon 87340805 87340813 87340805 ID=Msa0581840-mRNA-1:exon:32434;Parent=Msa0581840-mRNA-1
chr4_1 exon 87340966 87341426 87340966 ID=Msa0581840-mRNA-1:exon:32435;Parent=Msa0581840-mRNA-1
chr4_1 exon 87341442 87341683 87341442 ID=Msa0581840-mRNA-1:exon:32436;Parent=Msa0581840-mRNA-1
chr4_1 exon 87342099 87342269 87342099 ID=Msa0581840-mRNA-1:exon:32437;Parent=Msa0581840-mRNA-1
chr4_1 exon 87342300 87342537 87342300 ID=Msa0581840-mRNA-1:exon:32438;Parent=Msa0581840-mRNA-1
chr4_1 exon 87342636 87342721 87342636 ID=Msa0581840-mRNA-1:exon:32439;Parent=Msa0581840-mRNA-1
chr4_1 exon 87342963 87343076 87342963 ID=Msa0581840-mRNA-1:exon:32440;Parent=Msa0581840-mRNA-1
chr4_1 exon 87343161 87343349 87343161 ID=Msa0581840-mRNA-1:exon:32441;Parent=Msa0581840-mRNA-1
chr4_1 exon 87343516 87343581 87343516 ID=Msa0581840-mRNA-1:exon:32442;Parent=Msa0581840-mRNA-1
chr4_1 exon 87343701 87343757 87343701 ID=Msa0581840-mRNA-1:exon:32443;Parent=Msa0581840-mRNA-1
chr4_1 exon 87344293 87344415 87344293 ID=Msa0581840-mRNA-1:exon:32444;Parent=Msa0581840-mRNA-1
chr4_1 exon 87344496 87344612 87344496 ID=Msa0581840-mRNA-1:exon:32445;Parent=Msa0581840-mRNA-1
chr4_1 exon 87345924 87346031 87345924 ID=Msa0581840-mRNA-1:exon:32446;Parent=Msa0581840-mRNA-1
chr4_1 exon 87346110 87346245 87346110 ID=Msa0581840-mRNA-1:exon:32447;Parent=Msa0581840-mRNA-1
chr4_1 exon 87346843 87346974 87346843 ID=Msa0581840-mRNA-1:exon:32448;Parent=Msa0581840-mRNA-1
chr4_1 exon 87347550 87347726 87347550 ID=Msa0581840-mRNA-1:exon:32449;Parent=Msa0581840-mRNA-1
chr4_1 exon 87347806 87348015 87347806 ID=Msa0581840-mRNA-1:exon:32450;Parent=Msa0581840-mRNA-1
chr4_1 exon 87348052 87348199 87348052 ID=Msa0581840-mRNA-1:exon:32451;Parent=Msa0581840-mRNA-1
chr4_1 exon 87348215 87348416 87348215 ID=Msa0581840-mRNA-1:exon:32452;Parent=Msa0581840-mRNA-1
chr4_1 exon 87348758 87348935 87348758 ID=Msa0581840-mRNA-1:exon:32453;Parent=Msa0581840-mRNA-1
chr4_1 exon 87349033 87349268 87349033 ID=Msa0581840-mRNA-1:exon:32454;Parent=Msa0581840-mRNA-1
chr4_1 exon 87349968 87350046 87349968 ID=Msa0581840-mRNA-1:exon:32455;Parent=Msa0581840-mRNA-1
chr4_1 exon 87350176 87350411 87350176 ID=Msa0581840-mRNA-1:exon:32456;Parent=Msa0581840-mRNA-1
chr4_1 exon 87350916 87351105 87350916 ID=Msa0581840-mRNA-1:exon:32457;Parent=Msa0581840-mRNA-1
chr4_1 exon 87351269 87351494 87351269 ID=Msa0581840-mRNA-1:exon:32458;Parent=Msa0581840-mRNA-1
chr4_1 exon 87351581 87351736 87351581 ID=Msa0581840-mRNA-1:exon:32459;Parent=Msa0581840-mRNA-1
chr4_1 exon 87351851 87352221 87351851 ID=Msa0581840-mRNA-1:exon:32460;Parent=Msa0581840-mRNA-1
chr4_1 five_prime_UTR 87340805 87340813 87340805 ID=Msa0581840-mRNA-1:five_prime_utr;Parent=Msa0581840-mRNA-1
chr4_1 five_prime_UTR 87340966 87340978 87340966 ID=Msa0581840-mRNA-1:five_prime_utr;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87340979 87341426 87340979 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87341442 87341683 87341442 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87342099 87342269 87342099 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87342300 87342537 87342300 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87342636 87342721 87342636 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87342963 87343076 87342963 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87343161 87343349 87343161 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87343516 87343581 87343516 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87343701 87343757 87343701 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87344293 87344415 87344293 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87344496 87344612 87344496 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87345924 87346031 87345924 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87346110 87346245 87346110 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87346843 87346974 87346843 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87347550 87347726 87347550 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87347806 87348015 87347806 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87348052 87348199 87348052 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87348215 87348416 87348215 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87348758 87348935 87348758 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87349033 87349268 87349033 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87349968 87350046 87349968 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87350176 87350411 87350176 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87350916 87351105 87350916 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87351269 87351494 87351269 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87351581 87351736 87351581 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 CDS 87351851 87351953 87351851 ID=Msa0581840-mRNA-1:cds;Parent=Msa0581840-mRNA-1
chr4_1 three_prime_UTR 87351954 87352221 87351954 ID=Msa0581840-mRNA-1:three_prime_utr;Parent=Msa0581840-mRNA-1
Gene Sequence

>Msa0581840

ATGGAAGAAGGTAACAACAACAACGAGCTTCCATGTCCATCACCTTCACCTTTTCGCTCTTCTTCACTTCTCAAAGACATTTCTAATTTCAAAACCCCCAAACGCGCTTCTTCTTCTTCTTTTCTCTCTCAACAACATACTCCTCAAACTCAATTCTTCACCGCTTCCAAATCCAAACACACCACCACACTCCCGAGGAGGCCGAGGCTCAAAGAAAATCAAAGCATTTCAACCGCTTCAAAGAAACTCAAAGCTTTTCAACTCGAACAATCTCACTCCTCCAGAATCGAACAAATCAAAAAACAACAATCGCTTAAATCGTTAGCCAAATCGCTCACTGTTTGGCTTAATTTCCTTCTCGAATCACCTGCTTCTTGCGGTTGCGATGTTTCAATCGCCGGTGGAAGTCAGATCGCCGATGCTTCTCCGGTGATGAGTAAGGGGAAACGAAATTCAGTTGGAGTTGATTCTACTTGGAGAACTCCGAAACGACAGAGGAAGACAACGACAACAACTTCTTCGTCGCGTTTTGGTAAGGAGAATGTGTCTGCTTTCGATTTGCAGAATTCATCGTTTTCACGCTTGAAGGATTCGTTGAAGGATGTGTGTAGCTTCGATGATTTTAAGCAGCGGATGAGTGTTTATTTGAGTCTCGGAACTTGTGAAGATATTTTCCATGTCATGAATCAAGCACATTGCCCGATAGTGACGGATTTAGGGTTGAAGGATAAGGCCATAAAAGTCCTTATGTGTTATAATCCAAGTTGGCTGCGAATCGGTTTATATATAATTTTCGGTGGGGACTCTTTAGTGTCAAATGGGGATGGTGATTCTGACAAAGATGTTATATTTCTAAAAATGGGTTTCGCAAAATCATATGCATATAACAAGATGGTTGAAGGAGTTTATAGGTCTGGTTACTATGAAAATTTGGGGAATGTGATTTTGAAGAGAATATTGTTGCTTGTGCTTATACTTGATAAAGCTAAGTGTCAAAGTTGCCTCCCGATTGAGTATGGTATTGACGGACTGGACGGTGGTTCCCCTTTATTATTCAAAGCAGAATCCTGGGTTAAAGCAAGCAGTCAAGTGATCCAGGAATTTCTGTCATCTGATGTAATGCGCGGAGAAGGCAATCTTCTAACACATCTGGTTATTTTAGGTTACAAACTATCTCACCAACAGGGACCTCTTGTTGAGTATGATTTCCGAGTCAGAGATTTATTTATAGATCTCCAAGATGGGCTAAAATTGTGTAGAGCTATTCATCTCTTGCAAAATAATTCTTCTATACTCAAGAAAATTGCAGTTCCTTCTGACACCCGTAAGAAAAATATAGTAAACAGTGGTGTTGCCCTACAATATCTTAGACTAGCCGGGGTCTCGCTACTTGATGAAGACGACACAATGATTGTAGCAGATGATATTGTTAATGGAGACAAAGAACTCACAATTTCTTTACTCTGGAACATGTTCGTTCACTTGCAGCTACCTTTGTTGGTTGATAAAACAAGTTTAGTTGGGGAAATTTCAAAAATTCGCGGACTTGGCACGGAACTCATGACCGGTTCAAATTCTAGTTCTCTGGAATTGCTTTTGAAATGGATTCAGGCTGTTTGTGACCATTATAACTGCCCAGTTGACAATTTTCACTCCCTTGTTGATGGCAAAGCAATCTGGTGCTTACTTGATTATTACTTCCAGAAGGAACTTCACAATGTCTGTTCGTTGAAGGAACTTTATGAAAAAAGTGGCAAGACATCGATTATGTCAGTGAATGAGTATTCAGATGCACTGTACAATTTCATATTGTCCCAGAAATTGACCACGTTACTAGGGAATTTTCCTGAGGTACTTCAGATTAGTGAGCTACTTCAATATAATGGTGCTTGCAGCGATCGAAGTGTGGTGATATTGGTTGTTTTCCTGGCAAGCCAGTTATTTGTCAAGGAAAAAGTGGATAACTTAAATTTTCATAAGCTATTAGGTTATGACTGCCAAAACACAAATCGCAGGAACTTGAGGACGGTACAGTGCCATTCCCGTTCTGAATCAGCACAAAAACCTTATGATTCAGATGTGGGTGACAATGAAGATGCCGCAAGAAAATTCAAGGCCATTCAGACTTGGTGGCAAGATATGGCTGATCGAAACTGTATTATTCAGCCAACGATCTCTATTTTGCAAACATCTATGATCACAGAATGCAACACTTCCGTTAGAAGAGAAAATGCTGCAAGAACAATACAATCACATGTCCGAGGACTGGTTGTACGCCGCAAGTTTCTCAAGATGGTAAATAGTGTTACCCTTTTGCAGACCGTTTTCAGAGCTTGGCTGAAAGTGAGGCAGGAGTCGGTCTGCATGATATTCACTACTGGTCCAATCTATGATTTCTCATGTGAAATATTGAAGAAATCCGAAGTATACGAGAAGTACGTCATGCTTTTCTACCAAAGGCATTCTTTTTTGAGGTTGAAAAGATCAGCACAGCTTATCCAGCAAGCAGTGAGGAGTTGGTTCTATTGGAGGTCTCGACAAGGATGTAGAAGTCCTGACCTCTTGACTGCAGACACTGTGAATGCTGCCACTACTATTCAGAAATTCCTTCGTGATCAAAAAGAGAAAACTCTACATTTAGCCGAACAGAAACTTATCTTTGATCTTAAAACAAAGGCAGCCATTGGCATTCAGGTTGCTTGGAAAAACTACATATGCTGCAAGTCTACTAGGAAGGAGCACTTATTTGCAACTAAAATTCAGTGGTTATTGAGAAAACAATTTAGAAATCAGATTCAAGCTGTCATAAAGATTCAATCATATTTTCGAATGTGGAGATGTGTGATTGCTATTAAGAACTTCAAAACCATGTCCAAGGCTGCTATTGTCATTCAATCTTTTTTCCGTGGATGGATTGCTCGGAAGAATGCTTGTGCTCGTAAGAATCAAATTGTTGAGATTCAAAGGCATTGCCGTGGTTGGCTTGTGAAACGGAATTTCTTGTTTCAAAGAGATGCTATAGTAAAGATCCAGAGCGTCAGTCGAAGTTTGAAATGCCAGAAGACACTCAATTGTCAGAAAGATGCTGCACTGGAGATCCAGCGCTTCATTAGGGGACATTTAACCCGAAATCGGCTATTAGGTAGTGCTTCCAGGTTGCGTTCAGCTGATACTGGTAGTTGCATTTCAAGACCAGCTGGCTTATGTAGTTTTCAACTTGAAGCATTCATGTTCGCAGTAGTGAAATTGCAACGGTGGTGGAAGGGTCTCTTGTTGCTTAAATTAATGACTAAATCGGCCATCATAATTCAATCTTGTACTCGTGGGTGGATAGCCAGACGGAAGGCCATAGTTGAGACACAGAATATTAATGTCATGGTTCGTAACTGCCAGGAGTATGCCGCATTGGAGCTCCAGCGCTATATTAGGGGGCATTTAACTCGAAATTTGATATTAGGCAGTTCTTCTAAGCTACGTGCAGTTGCTGCTGGATGCATTTCAAAACCAACTGGCTTTTGTAGTTTTCAGTTGGAACTATTCTTGTTTCAAGTAGTGAAATTGCAACGATGGTGGAAGCATCTCTTGTTACATAAATTGATGACAAAGTCTGCAATCATTATTCAGTCCCACATTCGTGGGTGGGTAACTAGGCGAAAGGCCGTTGTTTATAGGCATCATATCGTTGTCATACAGTCCCACTGGAAAGGTTACGTTGCACGTCAGCAGTCAACAAAACAATTAATGGATTTGCGCTCAAGACTTCAAGAGTCTTCCAAAAATGTGGATGACAGCAAGCGTCTCATTAACAGACTCCTGGCAGCGCTTTCAGAGCTACTTAGTATGAAGAGTCTTAGTGACATTCTTCATACTTGTTCAACATTGGATTTGGCAACATGGCATTCTCAGAGATGTTGTGAAGAACTTGTGGCTGCTGGGGCCATTGACACCTTGCTGCGGCTTATTCGATTAATCAGCAGGAGTATCCCTGATCAAGAGGTTCTAAAGCATGTTTTGTCAACTCTCCGAAATCTTGCTCGCTATCCTCATCTGCTAGAAGTGCTGATACAAAGACAGGGTTCTATACAGACAATCGTCTTGGAGTTACTGAGGAATAAGGAGGAGGGCTTCTTCATTGCTTCTGAGCTTTTGAAGAAGATATGCTCAACTCAAAAAGGCGTTGAGACCATACTCAAATCTCCTGCCTTTCTAAAGAGACTGCACAGTCTTGTTGAGGAGCTTACTAGGAAGGCCACTTACCAGAAAAGAAATGTTCGGGGTCCTACTCCTAGTTCAGTTATTGTTAGAGAAAACACAGATAGAAGATTGAAGGAGGTTGCTGAGATTCTGAAGCTACTAGCACACCTTTGA
Protein sequence

>Msa0581840

MEEGNNNNELPCPSPSPFRSSSLLKDISNFKTPKRASSSSFLSQQHTPQTQFFTASKSKHTTTLPRRPRLKENQSISTASKKLKAFQLEQSHSSRIEQIKKQQSLKSLAKSLTVWLNFLLESPASCGCDVSIAGGSQIADASPVMSKGKRNSVGVDSTWRTPKRQRKTTTTTSSSRFGKENVSAFDLQNSSFSRLKDSLKDVCSFDDFKQRMSVYLSLGTCEDIFHVMNQAHCPIVTDLGLKDKAIKVLMCYNPSWLRIGLYIIFGGDSLVSNGDGDSDKDVIFLKMGFAKSYAYNKMVEGVYRSGYYENLGNVILKRILLLVLILDKAKCQSCLPIEYGIDGLDGGSPLLFKAESWVKASSQVIQEFLSSDVMRGEGNLLTHLVILGYKLSHQQGPLVEYDFRVRDLFIDLQDGLKLCRAIHLLQNNSSILKKIAVPSDTRKKNIVNSGVALQYLRLAGVSLLDEDDTMIVADDIVNGDKELTISLLWNMFVHLQLPLLVDKTSLVGEISKIRGLGTELMTGSNSSSLELLLKWIQAVCDHYNCPVDNFHSLVDGKAIWCLLDYYFQKELHNVCSLKELYEKSGKTSIMSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACSDRSVVILVVFLASQLFVKEKVDNLNFHKLLGYDCQNTNRRNLRTVQCHSRSESAQKPYDSDVGDNEDAARKFKAIQTWWQDMADRNCIIQPTISILQTSMITECNTSVRRENAARTIQSHVRGLVVRRKFLKMVNSVTLLQTVFRAWLKVRQESVCMIFTTGPIYDFSCEILKKSEVYEKYVMLFYQRHSFLRLKRSAQLIQQAVRSWFYWRSRQGCRSPDLLTADTVNAATTIQKFLRDQKEKTLHLAEQKLIFDLKTKAAIGIQVAWKNYICCKSTRKEHLFATKIQWLLRKQFRNQIQAVIKIQSYFRMWRCVIAIKNFKTMSKAAIVIQSFFRGWIARKNACARKNQIVEIQRHCRGWLVKRNFLFQRDAIVKIQSVSRSLKCQKTLNCQKDAALEIQRFIRGHLTRNRLLGSASRLRSADTGSCISRPAGLCSFQLEAFMFAVVKLQRWWKGLLLLKLMTKSAIIIQSCTRGWIARRKAIVETQNINVMVRNCQEYAALELQRYIRGHLTRNLILGSSSKLRAVAAGCISKPTGFCSFQLELFLFQVVKLQRWWKHLLLHKLMTKSAIIIQSHIRGWVTRRKAVVYRHHIVVIQSHWKGYVARQQSTKQLMDLRSRLQESSKNVDDSKRLINRLLAALSELLSMKSLSDILHTCSTLDLATWHSQRCCEELVAAGAIDTLLRLIRLISRSIPDQEVLKHVLSTLRNLARYPHLLEVLIQRQGSIQTIVLELLRNKEEGFFIASELLKKICSTQKGVETILKSPAFLKRLHSLVEELTRKATYQKRNVRGPTPSSVIVRENTDRRLKEVAEILKLLAHL*