Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940560 | sp|P92983|PROD1_ARATH | 58.233 | 498 | 201 | 5 | 1 | 491 | 1 | 498 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa0940560 | 0.803898 | 2.797944e-49 | -8.615850e-47 |
| Msa0608700 | Msa0940560 | 0.813113 | 3.016000e-51 | -8.615850e-47 |
| Msa0610700 | Msa0940560 | -0.800175 | 1.630080e-48 | -8.615850e-47 |
| Msa0613300 | Msa0940560 | 0.819409 | 1.178906e-52 | -8.615850e-47 |
| Msa0649200 | Msa0940560 | 0.801206 | 1.004357e-48 | -8.615850e-47 |
| Msa0685060 | Msa0940560 | 0.826847 | 2.166249e-54 | -8.615850e-47 |
| Msa0745140 | Msa0940560 | 0.802274 | 6.065160e-49 | -8.615850e-47 |
| Msa0776640 | Msa0940560 | 0.804113 | 2.524299e-49 | -8.615850e-47 |
| Msa0825920 | Msa0940560 | 0.804941 | 1.696043e-49 | -8.615850e-47 |
| Msa0177320 | Msa0940560 | 0.826953 | 2.043846e-54 | -8.615850e-47 |
| Msa0393750 | Msa0940560 | 0.834705 | 2.567830e-56 | -8.615850e-47 |
| Msa0441600 | Msa0940560 | 0.864646 | 1.047119e-64 | -8.615850e-47 |
| Msa0481310 | Msa0940560 | 0.827609 | 1.423432e-54 | -8.615850e-47 |
| Msa0351780 | Msa0940560 | 0.840991 | 6.226703e-58 | -8.615850e-47 |
| Msa0489120 | Msa0940560 | 0.851841 | 6.824239e-61 | -8.615850e-47 |
| Msa0875340 | Msa0940560 | 0.949602 | 9.119608e-108 | -8.615850e-47 |
| Msa0907710 | Msa0940560 | 0.930559 | 1.372214e-93 | -8.615850e-47 |
| Msa0940560 | Msa0977100 | 0.993174 | 6.094241e-198 | -8.615850e-47 |
| Msa0940560 | Msa1156720 | 0.800143 | 1.655001e-48 | -8.615850e-47 |
| Msa0940560 | Msa1180300 | 0.817028 | 4.078780e-52 | -8.615850e-47 |
| Msa0940560 | Msa1312770 | 0.815475 | 9.071559e-52 | -8.615850e-47 |
| Msa0940560 | Msa1439410 | 0.981388 | 1.808653e-152 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940560 | MtrunA17_Chr6g0456401 | 97.561 | 492 | 9 | 1 | 1 | 492 | 1 | 489 | 0.0 | 999 |
| Msa0940560 | MtrunA17_Chr6g0456391 | 97.358 | 492 | 10 | 1 | 1 | 492 | 1 | 489 | 0.0 | 998 |
| Msa0940560 | MtrunA17_Chr6g0456381 | 96.951 | 492 | 12 | 1 | 1 | 492 | 1 | 489 | 0.0 | 994 |
| Msa0940560 | MtrunA17_Chr7g0221391 | 72.672 | 494 | 130 | 3 | 1 | 492 | 1 | 491 | 0.0 | 753 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940560 | AT3G30775.1 | 58.233 | 498 | 201 | 5 | 1 | 491 | 1 | 498 | 0.0 | 569 |
| Msa0940560 | AT3G30775.2 | 58.233 | 498 | 201 | 5 | 1 | 491 | 1 | 498 | 0.0 | 569 |
| Msa0940560 | AT5G38710.1 | 58.442 | 462 | 179 | 4 | 31 | 489 | 24 | 475 | 0.0 | 563 |
| Msa0940560 | AT5G38710.2 | 56.315 | 483 | 191 | 7 | 1 | 480 | 1 | 466 | 0.0 | 551 |
Find 94 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTTCTTGTGGTGTTAA+TGG | 0.140964 | 6_3:+13114243 | None:intergenic |
| GGTTGTGATCGTAATCTTAA+AGG | 0.228265 | 6_3:-13116417 | Msa0940560:CDS |
| TTACGTGGCATGCTTGTTTA+TGG | 0.238176 | 6_3:-13116465 | Msa0940560:CDS |
| TCTTGTGGTGTTAATGGTTC+TGG | 0.257780 | 6_3:+13114249 | None:intergenic |
| GACAAAGTTGTTGTAATCTT+TGG | 0.266260 | 6_3:+13114202 | None:intergenic |
| CTGTCGTGGACGTTGGAATA+TGG | 0.273143 | 6_3:-13116632 | Msa0940560:CDS |
| AGTACATTGGCTGAGTCTTT+TGG | 0.274273 | 6_3:-13113928 | Msa0940560:CDS |
| GGACTTGATTCTGAGAAAAT+TGG | 0.279493 | 6_3:+13114294 | None:intergenic |
| GAAACTCTCGACAACACTTT+AGG | 0.315281 | 6_3:+13117007 | None:intergenic |
| GAAGGATGGGAGGAGTTTAA+TGG | 0.324027 | 6_3:+13116837 | None:intergenic |
| GATGATAATCCTATTGTGTT+TGG | 0.331772 | 6_3:-13114072 | Msa0940560:CDS |
| GCAGCAAAAGCATATGAAAT+TGG | 0.349585 | 6_3:-13113263 | Msa0940560:CDS |
| TTTCTTCAGCTCTTCTCAAT+AGG | 0.352369 | 6_3:+13113102 | None:intergenic |
| TGAAGAAAATAGAGGCCTTT+TGG | 0.353136 | 6_3:-13113087 | Msa0940560:CDS |
| TGAATTGTTCCAAACACAAT+AGG | 0.356564 | 6_3:+13114063 | None:intergenic |
| ATGGGATTTAAGTTGGTTAG+AGG | 0.360764 | 6_3:-13113970 | Msa0940560:CDS |
| TTGCTTGAGAAGTTTGCTAA+TGG | 0.363959 | 6_3:-13113838 | Msa0940560:CDS |
| GGAGGAGTTTAATGGCTTTG+TGG | 0.370820 | 6_3:+13116845 | None:intergenic |
| GTTAGCAAGTATATGCCATT+TGG | 0.380807 | 6_3:-13113149 | Msa0940560:CDS |
| GTTGTGATCGTAATCTTAAA+GGG | 0.388070 | 6_3:-13116416 | Msa0940560:CDS |
| TCATTTGGTTTGAGCAATGC+AGG | 0.402184 | 6_3:-13113179 | Msa0940560:CDS |
| TTGCTGCTGGAAAGAGTATA+AGG | 0.405411 | 6_3:-13116506 | Msa0940560:CDS |
| ATAGTCTCTCAGCGTCGTTT+AGG | 0.405775 | 6_3:+13116721 | None:intergenic |
| GAGAAGTTTGCTAATGGAAA+AGG | 0.409585 | 6_3:-13113832 | Msa0940560:CDS |
| GACGGTTGTGGTGGTGGTGG+TGG | 0.410895 | 6_3:+13116768 | None:intergenic |
| ATGTCAGATGCACTTTCATT+TGG | 0.412207 | 6_3:-13113194 | Msa0940560:CDS |
| TGGTGTGACGGTTGTGGTGG+TGG | 0.427223 | 6_3:+13116762 | None:intergenic |
| GTTCTGCATGCAACGGCTAT+AGG | 0.438450 | 6_3:-13116657 | Msa0940560:CDS |
| TTCCATGGTAAATTGAATGA+AGG | 0.441489 | 6_3:+13114330 | None:intergenic |
| GCAATCAAAATTGTTACAAA+CGG | 0.447102 | 6_3:-13116604 | Msa0940560:CDS |
| TGTGACGGTTGTGGTGGTGG+TGG | 0.448290 | 6_3:+13116765 | None:intergenic |
| TCTTCAATAGTATCATGAAT+TGG | 0.450449 | 6_3:+13113895 | None:intergenic |
| TGTCGTGGACGTTGGAATAT+GGG | 0.452589 | 6_3:-13116631 | Msa0940560:CDS |
| AATTAGAAACTTACAGAAGA+TGG | 0.452786 | 6_3:+13116357 | None:intergenic |
| AATTCCTATGGGATTTAAGT+TGG | 0.453707 | 6_3:-13113977 | Msa0940560:CDS |
| CAATCAAAATTGTTACAAAC+GGG | 0.455063 | 6_3:-13116603 | Msa0940560:CDS |
| GCTACACACAACATTGAATC+AGG | 0.457514 | 6_3:-13113796 | Msa0940560:intron |
| GGTCGAGATAAGACGGTTGT+TGG | 0.459521 | 6_3:+13116742 | None:intergenic |
| GTTGTGCAAATTCAAGTTTG+TGG | 0.466588 | 6_3:+13113225 | None:intergenic |
| CGGCAGCGGTGGCTGAAGGA+TGG | 0.474169 | 6_3:+13116823 | None:intergenic |
| GGAGAAGATGCTATTGCTGC+TGG | 0.477420 | 6_3:-13116519 | Msa0940560:CDS |
| TGAAAATCACTTTCTTCTTG+TGG | 0.479035 | 6_3:+13114234 | None:intergenic |
| ACCATCTCAACTGGTCCAAA+TGG | 0.482748 | 6_3:+13113134 | None:intergenic |
| CTTGAATTTGCACAACTATG+TGG | 0.482939 | 6_3:-13113218 | Msa0940560:CDS |
| ATAAGGTCTGTTAATGAAGC+TGG | 0.484228 | 6_3:-13116489 | Msa0940560:CDS |
| AACTTATTTGAAAGATGCTA+AGG | 0.486569 | 6_3:-13114040 | Msa0940560:CDS |
| AAAGCATATGAAATTGGAAT+GGG | 0.486854 | 6_3:-13113257 | Msa0940560:CDS |
| GGTAGAGAGTCTTGTTTCCA+TGG | 0.489711 | 6_3:+13114315 | None:intergenic |
| GGCAGCGGTGGCTGAAGGAT+GGG | 0.493133 | 6_3:+13116824 | None:intergenic |
| TGTACAGAAAAGAGCTTGGA+AGG | 0.493267 | 6_3:-13112931 | Msa0940560:intron |
| TAAGGCATAACCATCTCAAC+TGG | 0.497185 | 6_3:+13113125 | None:intergenic |
| AATCTTGAAAGATGCAGTTA+TGG | 0.507538 | 6_3:-13116580 | Msa0940560:CDS |
| TGTTCAGCATCAACCAATAG+TGG | 0.510458 | 6_3:+13114156 | None:intergenic |
| TGAAGCAAACATGCCACTAT+TGG | 0.511802 | 6_3:-13114169 | Msa0940560:CDS |
| CGTTGCATGCAGAACGGCTG+AGG | 0.516590 | 6_3:+13116665 | None:intergenic |
| AAGGGAGGCGACGGCAGCGG+TGG | 0.516875 | 6_3:+13116812 | None:intergenic |
| ATTCTTTCTAGTAATGCCAT+TGG | 0.522940 | 6_3:+13114384 | None:intergenic |
| GAGAAGGGAGGCGACGGCAG+CGG | 0.523270 | 6_3:+13116809 | None:intergenic |
| AGAAGAGCTGAAGAAAATAG+AGG | 0.524857 | 6_3:-13113095 | Msa0940560:CDS |
| GGAGTTTAATGGCTTTGTGG+TGG | 0.525108 | 6_3:+13116848 | None:intergenic |
| CATTTGGTTTGAGCAATGCA+GGG | 0.525718 | 6_3:-13113178 | Msa0940560:CDS |
| TCAGCTCTTCTCAATAGGTA+AGG | 0.526405 | 6_3:+13113107 | None:intergenic |
| CAAATCCAGAAGCAGCCAAA+AGG | 0.529777 | 6_3:+13113072 | None:intergenic |
| GCCATTTGGACCAGTTGAGA+TGG | 0.538971 | 6_3:-13113135 | Msa0940560:CDS |
| GGTTGTTGGTGTGACGGTTG+TGG | 0.540727 | 6_3:+13116756 | None:intergenic |
| AGGTTGTTCTCTTTCGAGAA+GGG | 0.540968 | 6_3:+13116794 | None:intergenic |
| TCCATGGTAAATTGAATGAA+GGG | 0.543779 | 6_3:+13114331 | None:intergenic |
| GCGACGGCAGCGGTGGCTGA+AGG | 0.544078 | 6_3:+13116819 | None:intergenic |
| AAAAGCATATGAAATTGGAA+TGG | 0.545661 | 6_3:-13113258 | Msa0940560:CDS |
| TATGTGAAGTAATCAATAGC+TGG | 0.545894 | 6_3:+13114120 | None:intergenic |
| GAATAAGTGATCTTCTAAGA+TGG | 0.547341 | 6_3:-13114365 | Msa0940560:CDS |
| ACCCTTCATTCAATTTACCA+TGG | 0.548501 | 6_3:-13114332 | Msa0940560:CDS |
| GATTTGATAGACAACTCATA+AGG | 0.552477 | 6_3:-13113055 | Msa0940560:intron |
| AAGGTTGTTCTCTTTCGAGA+AGG | 0.560901 | 6_3:+13116793 | None:intergenic |
| CATATTCCAACGTCCACGAC+AGG | 0.571109 | 6_3:+13116633 | None:intergenic |
| TCTTTCGAGAAGGGAGGCGA+CGG | 0.578179 | 6_3:+13116803 | None:intergenic |
| GTTAATGAAGCTGGCTTACG+TGG | 0.581537 | 6_3:-13116480 | Msa0940560:CDS |
| AATCACTGCAATATGTCCAA+TGG | 0.585286 | 6_3:-13114400 | Msa0940560:CDS |
| ATAGGACCTGTCGTGGACGT+TGG | 0.590338 | 6_3:-13116639 | Msa0940560:CDS |
| AGCGGTGGCTGAAGGATGGG+AGG | 0.592747 | 6_3:+13116827 | None:intergenic |
| TGTTGGTGTGACGGTTGTGG+TGG | 0.605574 | 6_3:+13116759 | None:intergenic |
| CTAACCAACTTAAATCCCAT+AGG | 0.606330 | 6_3:+13113973 | None:intergenic |
| TTGTTCTCTTTCGAGAAGGG+AGG | 0.606843 | 6_3:+13116797 | None:intergenic |
| TCGTTTAGGTCGAGATAAGA+CGG | 0.607879 | 6_3:+13116735 | None:intergenic |
| GATCTTATCAACGTGGACGT+TGG | 0.615310 | 6_3:+13116687 | None:intergenic |
| CTCAGCCGTTCTGCATGCAA+CGG | 0.616136 | 6_3:-13116664 | Msa0940560:CDS |
| GAAGATGCACATGATAATGA+TGG | 0.618481 | 6_3:-13116438 | Msa0940560:CDS |
| AAGTGATTTGCTAACATCAA+CGG | 0.622647 | 6_3:+13116383 | None:intergenic |
| TATGTCTACAGAAAGTACAT+TGG | 0.622655 | 6_3:-13113941 | Msa0940560:CDS |
| TATAGCCGTTGCATGCAGAA+CGG | 0.636543 | 6_3:+13116659 | None:intergenic |
| TAAGACGGTTGTTGGTGTGA+CGG | 0.642129 | 6_3:+13116750 | None:intergenic |
| TAGAAACTTACAGAAGATGG+AGG | 0.662988 | 6_3:+13116360 | None:intergenic |
| ACAGAAAAGAGCTTGGAAGG+AGG | 0.680297 | 6_3:-13112928 | Msa0940560:intron |
| GGCTGAGGATCTTATCAACG+TGG | 0.744582 | 6_3:+13116680 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATTATTATTATTATTA+TGG | + | chr6_3:13113869-13113888 | None:intergenic | 0.0% |
| !!! | TAATAATAAATTAAATATTT+TGG | - | chr6_3:13114648-13114667 | Msa0940560:intron | 0.0% |
| !!! | TTATATTTTATACATAATGT+TGG | - | chr6_3:13114843-13114862 | Msa0940560:intron | 10.0% |
| !!! | ACATTTTCTTAAAATATTAT+CGG | + | chr6_3:13116082-13116101 | None:intergenic | 10.0% |
| !!! | ACATTTTCTTAAAATATTAT+CGG | + | chr6_3:13116082-13116101 | None:intergenic | 10.0% |
| !!! | AAATGAATTTTGAATTATTA+TGG | - | chr6_3:13116961-13116980 | Msa0940560:five_prime_UTR | 10.0% |
| !!! | TTTTATTTAAAGAAGAAAAG+AGG | - | chr6_3:13113484-13113503 | Msa0940560:intron | 15.0% |
| !!! | CTATTTTTTAAAAGCAAAAT+TGG | - | chr6_3:13113630-13113649 | Msa0940560:intron | 15.0% |
| !!! | TGAAATGTGTTTTAATATAA+AGG | - | chr6_3:13113824-13113843 | Msa0940560:CDS | 15.0% |
| !!! | TACTTTTCTAATTTTTTATG+TGG | - | chr6_3:13113965-13113984 | Msa0940560:CDS | 15.0% |
| !! | TGTCTCATATTATATATTAT+TGG | - | chr6_3:13114446-13114465 | Msa0940560:intron | 15.0% |
| !!! | TTGTACATTTTAATATGAAT+TGG | + | chr6_3:13115133-13115152 | None:intergenic | 15.0% |
| !!! | TTGATTTTTTTTTATGTGAT+AGG | - | chr6_3:13115285-13115304 | Msa0940560:intron | 15.0% |
| !! | ATTAGATATTTACATTCATT+AGG | - | chr6_3:13115959-13115978 | Msa0940560:intron | 15.0% |
| !! | TTAGATATTTACATTCATTA+GGG | - | chr6_3:13115960-13115979 | Msa0940560:intron | 15.0% |
| !! | AATTACATTAATTGAAATCT+TGG | + | chr6_3:13116418-13116437 | None:intergenic | 15.0% |
| !! | TGTCTCAAAATAATTAAAAA+AGG | + | chr6_3:13116724-13116743 | None:intergenic | 15.0% |
| !!! | AATTATTATGGTATTTTTGT+TGG | - | chr6_3:13116973-13116992 | Msa0940560:five_prime_UTR | 15.0% |
| !!! | CAAATTTTCTTGTTTTTGAA+TGG | - | chr6_3:13112808-13112827 | Msa0940560:three_prime_UTR | 20.0% |
| !!! | AGTATTAATTTTCATGATCA+TGG | - | chr6_3:13113413-13113432 | Msa0940560:intron | 20.0% |
| !! | ACTTTAAATAAAGATTGAAG+AGG | - | chr6_3:13113766-13113785 | Msa0940560:intron | 20.0% |
| !! | CATTTCACACAAAAAATATT+GGG | + | chr6_3:13113811-13113830 | None:intergenic | 20.0% |
| !! | ACATTTCACACAAAAAATAT+TGG | + | chr6_3:13113812-13113831 | None:intergenic | 20.0% |
| !! | TATTATTATGGTGTAAATGA+GGG | + | chr6_3:13113857-13113876 | None:intergenic | 20.0% |
| !! | TTATTATTATGGTGTAAATG+AGG | + | chr6_3:13113858-13113877 | None:intergenic | 20.0% |
| !! | TCATTATTTCCTTAACTATT+GGG | + | chr6_3:13113997-13114016 | None:intergenic | 20.0% |
| !! | ATCATTATTTCCTTAACTAT+TGG | + | chr6_3:13113998-13114017 | None:intergenic | 20.0% |
| !! | TAATAATACAAAGTAGTTGA+TGG | + | chr6_3:13114109-13114128 | None:intergenic | 20.0% |
| !!! | TTTTTAAGTTGCAAAAATCT+TGG | - | chr6_3:13114398-13114417 | Msa0940560:CDS | 20.0% |
| !!! | AAATTTGAGTTTGGTATTTT+TGG | - | chr6_3:13114539-13114558 | Msa0940560:intron | 20.0% |
| !!! | TTTGGTATTTTTGGATAAAA+GGG | - | chr6_3:13114548-13114567 | Msa0940560:intron | 20.0% |
| !!! | AGTGTTTAGAAATTAGATTT+TGG | - | chr6_3:13114925-13114944 | Msa0940560:intron | 20.0% |
| !!! | GAAATTAGATTTTGGTATTT+TGG | - | chr6_3:13114933-13114952 | Msa0940560:intron | 20.0% |
| !! | AATAAAACTCTAGTAAGAAA+TGG | + | chr6_3:13114995-13115014 | None:intergenic | 20.0% |
| !!! | TCAAAGTGTTTATACTAAAT+TGG | - | chr6_3:13115025-13115044 | Msa0940560:intron | 20.0% |
| !! | ATAAATGTAACCACATATAT+CGG | - | chr6_3:13116303-13116322 | Msa0940560:intron | 20.0% |
| !!! | TGTAATTTTTTTTGTTGTGT+AGG | - | chr6_3:13116431-13116450 | Msa0940560:CDS | 20.0% |
| !!! | GTAATTTTTTTTGTTGTGTA+GGG | - | chr6_3:13116432-13116451 | Msa0940560:CDS | 20.0% |
| ! | GCAATCAAAATTGTTACAAA+CGG | - | chr6_3:13113123-13113142 | Msa0940560:CDS | 25.0% |
| ! | CAATCAAAATTGTTACAAAC+GGG | - | chr6_3:13113124-13113143 | Msa0940560:CDS | 25.0% |
| !! | TTTTATGAACATTTTTGTGC+TGG | - | chr6_3:13113187-13113206 | Msa0940560:CDS | 25.0% |
| ! | AATTAGAAACTTACAGAAGA+TGG | + | chr6_3:13113373-13113392 | None:intergenic | 25.0% |
| !! | TTAAAGAAGAAAAGAGGTTT+TGG | - | chr6_3:13113490-13113509 | Msa0940560:intron | 25.0% |
| !!! | AGGTTTTGGTCAAATTAATT+TGG | - | chr6_3:13113504-13113523 | Msa0940560:intron | 25.0% |
| ! | CATTATTTCCTTAACTATTG+GGG | + | chr6_3:13113996-13114015 | None:intergenic | 25.0% |
| ! | TGTATGTCTTGAAAAACATA+AGG | - | chr6_3:13114023-13114042 | Msa0940560:CDS | 25.0% |
| !! | AGTGTTTAGAAATTTGAGTT+TGG | - | chr6_3:13114530-13114549 | Msa0940560:intron | 25.0% |
| !!! | GTTTGGTATTTTTGGATAAA+AGG | - | chr6_3:13114547-13114566 | Msa0940560:intron | 25.0% |
| ! | AAAAGGGTTAATCAGTAAAT+TGG | - | chr6_3:13114564-13114583 | Msa0940560:intron | 25.0% |
| ! | ACCATTTCTAATGTAATTAG+AGG | - | chr6_3:13114593-13114612 | Msa0940560:intron | 25.0% |
| ! | ACCTCTAATTACATTAGAAA+TGG | + | chr6_3:13114597-13114616 | None:intergenic | 25.0% |
| !!! | TGTTACTGTTTTAGACAAAA+TGG | - | chr6_3:13114745-13114764 | Msa0940560:intron | 25.0% |
| !!! | ATTTTGGTATTTTGGACAAA+AGG | - | chr6_3:13114941-13114960 | Msa0940560:intron | 25.0% |
| !!! | TTTTGGTATTTTGGACAAAA+GGG | - | chr6_3:13114942-13114961 | Msa0940560:intron | 25.0% |
| ! | GTGTCAAATGCAAAAAATTA+TGG | + | chr6_3:13115067-13115086 | None:intergenic | 25.0% |
| !!! | TTTTTTGTAGTGTGGTATAA+TGG | + | chr6_3:13115457-13115476 | None:intergenic | 25.0% |
| ! | AACTTATTTGAAAGATGCTA+AGG | - | chr6_3:13115687-13115706 | Msa0940560:intron | 25.0% |
| ! | TGAAAAAATTGGAATTCCTA+TGG | - | chr6_3:13115738-13115757 | Msa0940560:intron | 25.0% |
| ! | GAAAAAATTGGAATTCCTAT+GGG | - | chr6_3:13115739-13115758 | Msa0940560:intron | 25.0% |
| ! | TCTTCAATAGTATCATGAAT+TGG | + | chr6_3:13115835-13115854 | None:intergenic | 25.0% |
| ! | AGATTGACACTTCATATTAA+TGG | + | chr6_3:13116201-13116220 | None:intergenic | 25.0% |
| ! | CACATATATTTCCAGATTTA+AGG | + | chr6_3:13116365-13116384 | None:intergenic | 25.0% |
| !! | AAAAGCATATGAAATTGGAA+TGG | - | chr6_3:13116469-13116488 | Msa0940560:CDS | 25.0% |
| ! | AAAGCATATGAAATTGGAAT+GGG | - | chr6_3:13116470-13116489 | Msa0940560:CDS | 25.0% |
| !! | GTTTTTCTCATAGTGATTTT+TGG | - | chr6_3:13116763-13116782 | Msa0940560:CDS | 25.0% |
| !!! | TTTGAGTTTTGTGCTTATTA+TGG | - | chr6_3:13117011-13117030 | Msa0940560:five_prime_UTR | 25.0% |
| !!! | TTGAGTTTTGTGCTTATTAT+GGG | - | chr6_3:13117012-13117031 | Msa0940560:five_prime_UTR | 25.0% |
| !!! | GGTTTTTTTACACGTGATTT+TGG | + | chr6_3:13112702-13112721 | None:intergenic | 30.0% |
| !! | GATTCTTGATGATCTTTTGT+GGG | + | chr6_3:13112847-13112866 | None:intergenic | 30.0% |
| !! | AGATTCTTGATGATCTTTTG+TGG | + | chr6_3:13112848-13112867 | None:intergenic | 30.0% |
| AATCTTGAAAGATGCAGTTA+TGG | - | chr6_3:13113147-13113166 | Msa0940560:CDS | 30.0% | |
| GTTGTGATCGTAATCTTAAA+GGG | - | chr6_3:13113311-13113330 | Msa0940560:intron | 30.0% | |
| !! | AAGTGATTTGCTAACATCAA+CGG | + | chr6_3:13113347-13113366 | None:intergenic | 30.0% |
| GCACATGTTAAAACAAGTAT+AGG | - | chr6_3:13114045-13114064 | Msa0940560:CDS | 30.0% | |
| TGGCATTCTGTCTTAAAAAT+TGG | - | chr6_3:13114701-13114720 | Msa0940560:intron | 30.0% | |
| AGTAAAGCTCATGTTAGAAA+TGG | + | chr6_3:13114795-13114814 | None:intergenic | 30.0% | |
| GTTGGCATTGTAACAAAAAT+TGG | - | chr6_3:13114897-13114916 | Msa0940560:intron | 30.0% | |
| ! | ATTCTTTCTAGTAATGCCAT+TGG | + | chr6_3:13115346-13115365 | None:intergenic | 30.0% |
| ! | GAATAAGTGATCTTCTAAGA+TGG | - | chr6_3:13115362-13115381 | Msa0940560:intron | 30.0% |
| TCCATGGTAAATTGAATGAA+GGG | + | chr6_3:13115399-13115418 | None:intergenic | 30.0% | |
| TTCCATGGTAAATTGAATGA+AGG | + | chr6_3:13115400-13115419 | None:intergenic | 30.0% | |
| TGAAAATCACTTTCTTCTTG+TGG | + | chr6_3:13115496-13115515 | None:intergenic | 30.0% | |
| GACAAAGTTGTTGTAATCTT+TGG | + | chr6_3:13115528-13115547 | None:intergenic | 30.0% | |
| TATGTGAAGTAATCAATAGC+TGG | + | chr6_3:13115610-13115629 | None:intergenic | 30.0% | |
| GATGATAATCCTATTGTGTT+TGG | - | chr6_3:13115655-13115674 | Msa0940560:intron | 30.0% | |
| TGAATTGTTCCAAACACAAT+AGG | + | chr6_3:13115667-13115686 | None:intergenic | 30.0% | |
| AATTCCTATGGGATTTAAGT+TGG | - | chr6_3:13115750-13115769 | Msa0940560:intron | 30.0% | |
| ! | TATGTCTACAGAAAGTACAT+TGG | - | chr6_3:13115786-13115805 | Msa0940560:intron | 30.0% |
| TCAGATGTTCATATATGTGT+CGG | + | chr6_3:13116046-13116065 | None:intergenic | 30.0% | |
| !! | TTTTTGTTGTGTAGGGAAAT+TGG | - | chr6_3:13116439-13116458 | Msa0940560:CDS | 30.0% |
| GATTTGATAGACAACTCATA+AGG | - | chr6_3:13116672-13116691 | Msa0940560:CDS | 30.0% | |
| ! | ATTTTGTACAGAAAAGAGCT+TGG | - | chr6_3:13116792-13116811 | Msa0940560:CDS | 30.0% |
| ATAAGGTCTGTTAATGAAGC+TGG | - | chr6_3:13113238-13113257 | Msa0940560:CDS | 35.0% | |
| ! | GAAGATGCACATGATAATGA+TGG | - | chr6_3:13113289-13113308 | Msa0940560:intron | 35.0% |
| GGTTGTGATCGTAATCTTAA+AGG | - | chr6_3:13113310-13113329 | Msa0940560:intron | 35.0% | |
| TAGAAACTTACAGAAGATGG+AGG | + | chr6_3:13113370-13113389 | None:intergenic | 35.0% | |
| TTTGGTCTAATAATGTAGCG+TGG | - | chr6_3:13113522-13113541 | Msa0940560:intron | 35.0% | |
| !! | TTTCTATTTCTGGAAGGGAT+TGG | + | chr6_3:13114085-13114104 | None:intergenic | 35.0% |
| !! | ATGGCTTTCTATTTCTGGAA+GGG | + | chr6_3:13114090-13114109 | None:intergenic | 35.0% |
| !! | AGTTGATGGCTTTCTATTTC+TGG | + | chr6_3:13114095-13114114 | None:intergenic | 35.0% |
| ! | TTAAACTAGTTTGTGCCTCA+TGG | - | chr6_3:13114170-13114189 | Msa0940560:CDS | 35.0% |
| !! | AACGTGTGTGTTTTATTGTG+AGG | - | chr6_3:13114231-13114250 | Msa0940560:CDS | 35.0% |
| GTGATGAGTATGAATTGAGT+TGG | - | chr6_3:13114282-13114301 | Msa0940560:CDS | 35.0% | |
| GACATTGAGTCATATATCGT+TGG | - | chr6_3:13114502-13114521 | Msa0940560:intron | 35.0% | |
| ACATTGTACTTCAACTAGGT+GGG | + | chr6_3:13114678-13114697 | None:intergenic | 35.0% | |
| AACCACATTGTACTTCAACT+AGG | + | chr6_3:13114682-13114701 | None:intergenic | 35.0% | |
| TAGTTGAAGTACAATGTGGT+TGG | - | chr6_3:13114681-13114700 | Msa0940560:intron | 35.0% | |
| AACAACATGTTCGTACTCAT+TGG | - | chr6_3:13115096-13115115 | Msa0940560:intron | 35.0% | |
| TCAAAAATCGAATTGCGTGA+AGG | + | chr6_3:13115232-13115251 | None:intergenic | 35.0% | |
| !! | ACGCAATTCGATTTTTGAAG+TGG | - | chr6_3:13115234-13115253 | Msa0940560:intron | 35.0% |
| AATCACTGCAATATGTCCAA+TGG | - | chr6_3:13115327-13115346 | Msa0940560:intron | 35.0% | |
| ACCCTTCATTCAATTTACCA+TGG | - | chr6_3:13115395-13115414 | Msa0940560:intron | 35.0% | |
| ! | GGACTTGATTCTGAGAAAAT+TGG | + | chr6_3:13115436-13115455 | None:intergenic | 35.0% |
| !!! | GTTCTGGTTTTTTTGTAGTG+TGG | + | chr6_3:13115465-13115484 | None:intergenic | 35.0% |
| ! | CTTTCTTCTTGTGGTGTTAA+TGG | + | chr6_3:13115487-13115506 | None:intergenic | 35.0% |
| ACACAAGCTGCTGAAAAAAT+TGG | - | chr6_3:13115727-13115746 | Msa0940560:intron | 35.0% | |
| CTAACCAACTTAAATCCCAT+AGG | + | chr6_3:13115757-13115776 | None:intergenic | 35.0% | |
| !! | ATGGGATTTAAGTTGGTTAG+AGG | - | chr6_3:13115757-13115776 | Msa0940560:intron | 35.0% |
| !! | TTGCTTGAGAAGTTTGCTAA+TGG | - | chr6_3:13115889-13115908 | Msa0940560:intron | 35.0% |
| !! | GAGAAGTTTGCTAATGGAAA+AGG | - | chr6_3:13115895-13115914 | Msa0940560:intron | 35.0% |
| AAGTCTGATTCCGATATATG+TGG | + | chr6_3:13116316-13116335 | None:intergenic | 35.0% | |
| ! | GCAGCAAAAGCATATGAAAT+TGG | - | chr6_3:13116464-13116483 | Msa0940560:CDS | 35.0% |
| ! | GTTGTGCAAATTCAAGTTTG+TGG | + | chr6_3:13116505-13116524 | None:intergenic | 35.0% |
| CTTGAATTTGCACAACTATG+TGG | - | chr6_3:13116509-13116528 | Msa0940560:CDS | 35.0% | |
| ATGTCAGATGCACTTTCATT+TGG | - | chr6_3:13116533-13116552 | Msa0940560:CDS | 35.0% | |
| GTTAGCAAGTATATGCCATT+TGG | - | chr6_3:13116578-13116597 | Msa0940560:CDS | 35.0% | |
| TTTCTTCAGCTCTTCTCAAT+AGG | + | chr6_3:13116628-13116647 | None:intergenic | 35.0% | |
| AGAAGAGCTGAAGAAAATAG+AGG | - | chr6_3:13116632-13116651 | Msa0940560:CDS | 35.0% | |
| ! | TGAAGAAAATAGAGGCCTTT+TGG | - | chr6_3:13116640-13116659 | Msa0940560:CDS | 35.0% |
| GAAACTCTCGACAACACTTT+AGG | + | chr6_3:13112723-13112742 | None:intergenic | 40.0% | |
| ! | TTTTTGAATGGCAACTCGTG+TGG | - | chr6_3:13112820-13112839 | Msa0940560:three_prime_UTR | 40.0% |
| !!! | GCTTTGTGGTGGTTTTGAAA+CGG | + | chr6_3:13112871-13112890 | None:intergenic | 40.0% |
| AGGTTGTTCTCTTTCGAGAA+GGG | + | chr6_3:13112936-13112955 | None:intergenic | 40.0% | |
| AAGGTTGTTCTCTTTCGAGA+AGG | + | chr6_3:13112937-13112956 | None:intergenic | 40.0% | |
| TCGTTTAGGTCGAGATAAGA+CGG | + | chr6_3:13112995-13113014 | None:intergenic | 40.0% | |
| ! | TTGCTGCTGGAAAGAGTATA+AGG | - | chr6_3:13113221-13113240 | Msa0940560:CDS | 40.0% |
| TTACGTGGCATGCTTGTTTA+TGG | - | chr6_3:13113262-13113281 | Msa0940560:CDS | 40.0% | |
| !! | GATGGCTTTCTATTTCTGGA+AGG | + | chr6_3:13114091-13114110 | None:intergenic | 40.0% |
| !!! | TGCCTCATGGTTTTAGTTGT+GGG | - | chr6_3:13114183-13114202 | Msa0940560:CDS | 40.0% |
| AACCCACAACTAAAACCATG+AGG | + | chr6_3:13114188-13114207 | None:intergenic | 40.0% | |
| !!! | ATGGTTTTAGTTGTGGGTTG+TGG | - | chr6_3:13114189-13114208 | Msa0940560:CDS | 40.0% |
| !!! | TGGTTTTAGTTGTGGGTTGT+GGG | - | chr6_3:13114190-13114209 | Msa0940560:CDS | 40.0% |
| AGAAGTAGCATGACTTGAAC+TGG | + | chr6_3:13114361-13114380 | None:intergenic | 40.0% | |
| TCTTGGAATCATGTGACAGA+CGG | - | chr6_3:13114415-13114434 | Msa0940560:CDS | 40.0% | |
| ACATTGTCCTTAAGCTAGGT+GGG | + | chr6_3:13114473-13114492 | None:intergenic | 40.0% | |
| AACCACATTGTCCTTAAGCT+AGG | + | chr6_3:13114477-13114496 | None:intergenic | 40.0% | |
| TAGCTTAAGGACAATGTGGT+TGG | - | chr6_3:13114476-13114495 | Msa0940560:intron | 40.0% | |
| ATTGTACTTCAACTAGGTGG+GGG | + | chr6_3:13114676-13114695 | None:intergenic | 40.0% | |
| CATTGTACTTCAACTAGGTG+GGG | + | chr6_3:13114677-13114696 | None:intergenic | 40.0% | |
| CACATTGTACTTCAACTAGG+TGG | + | chr6_3:13114679-13114698 | None:intergenic | 40.0% | |
| CACCTAGTTGAAGTACAATG+TGG | - | chr6_3:13114677-13114696 | Msa0940560:intron | 40.0% | |
| ACATTGTACATCAGCTAGGT+GGG | + | chr6_3:13114876-13114895 | None:intergenic | 40.0% | |
| AACCACATTGTACATCAGCT+AGG | + | chr6_3:13114880-13114899 | None:intergenic | 40.0% | |
| TAGCTGATGTACAATGTGGT+TGG | - | chr6_3:13114879-13114898 | Msa0940560:intron | 40.0% | |
| GGGTTCATTAGTACGTAGTT+TGG | - | chr6_3:13114962-13114981 | Msa0940560:intron | 40.0% | |
| TGTTCGTACTCATTGGATCA+AGG | - | chr6_3:13115103-13115122 | Msa0940560:intron | 40.0% | |
| AAAATCGAATTGCGTGAAGG+TGG | + | chr6_3:13115229-13115248 | None:intergenic | 40.0% | |
| ! | TCTTGTGGTGTTAATGGTTC+TGG | + | chr6_3:13115481-13115500 | None:intergenic | 40.0% |
| TGAAGCAAACATGCCACTAT+TGG | - | chr6_3:13115558-13115577 | Msa0940560:intron | 40.0% | |
| TGTTCAGCATCAACCAATAG+TGG | + | chr6_3:13115574-13115593 | None:intergenic | 40.0% | |
| !! | AGTACATTGGCTGAGTCTTT+TGG | - | chr6_3:13115799-13115818 | Msa0940560:intron | 40.0% |
| GCTACACACAACATTGAATC+AGG | - | chr6_3:13115931-13115950 | Msa0940560:intron | 40.0% | |
| !! | TCATTTGGTTTGAGCAATGC+AGG | - | chr6_3:13116548-13116567 | Msa0940560:CDS | 40.0% |
| !! | CATTTGGTTTGAGCAATGCA+GGG | - | chr6_3:13116549-13116568 | Msa0940560:CDS | 40.0% |
| TAAGGCATAACCATCTCAAC+TGG | + | chr6_3:13116605-13116624 | None:intergenic | 40.0% | |
| TCAGCTCTTCTCAATAGGTA+AGG | + | chr6_3:13116623-13116642 | None:intergenic | 40.0% | |
| TGTACAGAAAAGAGCTTGGA+AGG | - | chr6_3:13116796-13116815 | Msa0940560:CDS | 40.0% | |
| !! | TCACTTTTATACTGTAGGGG+CGG | + | chr6_3:13117044-13117063 | None:intergenic | 40.0% |
| !! | GGAGTTTAATGGCTTTGTGG+TGG | + | chr6_3:13112882-13112901 | None:intergenic | 45.0% |
| ! | GGAGGAGTTTAATGGCTTTG+TGG | + | chr6_3:13112885-13112904 | None:intergenic | 45.0% |
| GAAGGATGGGAGGAGTTTAA+TGG | + | chr6_3:13112893-13112912 | None:intergenic | 45.0% | |
| TTGTTCTCTTTCGAGAAGGG+AGG | + | chr6_3:13112933-13112952 | None:intergenic | 45.0% | |
| TAAGACGGTTGTTGGTGTGA+CGG | + | chr6_3:13112980-13112999 | None:intergenic | 45.0% | |
| ATAGTCTCTCAGCGTCGTTT+AGG | + | chr6_3:13113009-13113028 | None:intergenic | 45.0% | |
| GATCTTATCAACGTGGACGT+TGG | + | chr6_3:13113043-13113062 | None:intergenic | 45.0% | |
| TATAGCCGTTGCATGCAGAA+CGG | + | chr6_3:13113071-13113090 | None:intergenic | 45.0% | |
| TGTCGTGGACGTTGGAATAT+GGG | - | chr6_3:13113096-13113115 | Msa0940560:CDS | 45.0% | |
| ! | GTTAATGAAGCTGGCTTACG+TGG | - | chr6_3:13113247-13113266 | Msa0940560:CDS | 45.0% |
| TGGACTCACCCCAATAGTTA+AGG | - | chr6_3:13113985-13114004 | Msa0940560:CDS | 45.0% | |
| !!! | GTGCCTCATGGTTTTAGTTG+TGG | - | chr6_3:13114182-13114201 | Msa0940560:CDS | 45.0% |
| !!! | GGTTTTAGTTGTGGGTTGTG+GGG | - | chr6_3:13114191-13114210 | Msa0940560:CDS | 45.0% |
| TATTGGTCCCACCTAGCTTA+AGG | - | chr6_3:13114463-13114482 | Msa0940560:intron | 45.0% | |
| CACATTGTCCTTAAGCTAGG+TGG | + | chr6_3:13114474-13114493 | None:intergenic | 45.0% | |
| CACCTAGCTTAAGGACAATG+TGG | - | chr6_3:13114472-13114491 | Msa0940560:intron | 45.0% | |
| TTGTACTTCAACTAGGTGGG+GGG | + | chr6_3:13114675-13114694 | None:intergenic | 45.0% | |
| CACATTGTACATCAGCTAGG+TGG | + | chr6_3:13114877-13114896 | None:intergenic | 45.0% | |
| CACCTAGCTGATGTACAATG+TGG | - | chr6_3:13114875-13114894 | Msa0940560:intron | 45.0% | |
| GTCAGCACATTCATGACAGT+TGG | + | chr6_3:13115186-13115205 | None:intergenic | 45.0% | |
| !! | GGTAGAGAGTCTTGTTTCCA+TGG | + | chr6_3:13115415-13115434 | None:intergenic | 45.0% |
| ! | TGGCTGAGTCTTTTGGATCT+AGG | - | chr6_3:13115806-13115825 | Msa0940560:intron | 45.0% |
| GTGTTTGTGTTGTCGCATGT+CGG | - | chr6_3:13116167-13116186 | Msa0940560:intron | 45.0% | |
| TGACACTGACACGTAGACAA+TGG | - | chr6_3:13116255-13116274 | Msa0940560:intron | 45.0% | |
| AACCAGACACGCCTTAAATC+TGG | - | chr6_3:13116351-13116370 | Msa0940560:intron | 45.0% | |
| ! | TTCCAGATTTAAGGCGTGTC+TGG | + | chr6_3:13116356-13116375 | None:intergenic | 45.0% |
| ACCATCTCAACTGGTCCAAA+TGG | + | chr6_3:13116596-13116615 | None:intergenic | 45.0% | |
| CAAATCCAGAAGCAGCCAAA+AGG | + | chr6_3:13116658-13116677 | None:intergenic | 45.0% | |
| ACAGAAAAGAGCTTGGAAGG+AGG | - | chr6_3:13116799-13116818 | Msa0940560:CDS | 45.0% | |
| !! | AATAATAATAATAATATAAG+AGG | - | chr6_3:13113927-13113946 | Msa0940560:CDS | 5.0% |
| !! | TAAAAAATATAAAATTGAAA+AGG | + | chr6_3:13115994-13116013 | None:intergenic | 5.0% |
| GGTCGAGATAAGACGGTTGT+TGG | + | chr6_3:13112988-13113007 | None:intergenic | 50.0% | |
| GGCTGAGGATCTTATCAACG+TGG | + | chr6_3:13113050-13113069 | None:intergenic | 50.0% | |
| GTTCTGCATGCAACGGCTAT+AGG | - | chr6_3:13113070-13113089 | Msa0940560:CDS | 50.0% | |
| CATATTCCAACGTCCACGAC+AGG | + | chr6_3:13113097-13113116 | None:intergenic | 50.0% | |
| CTGTCGTGGACGTTGGAATA+TGG | - | chr6_3:13113095-13113114 | Msa0940560:CDS | 50.0% | |
| GGAGAAGATGCTATTGCTGC+TGG | - | chr6_3:13113208-13113227 | Msa0940560:CDS | 50.0% | |
| TACATCAGCTAGGTGGGAGT+GGG | + | chr6_3:13114870-13114889 | None:intergenic | 50.0% | |
| GTGTTTGTGTCGTCGCATGT+TGG | - | chr6_3:13116110-13116129 | Msa0940560:intron | 50.0% | |
| CGTGTCTGGTTGATCGATGT+GGG | + | chr6_3:13116342-13116361 | None:intergenic | 50.0% | |
| GCCATTTGGACCAGTTGAGA+TGG | - | chr6_3:13116592-13116611 | Msa0940560:CDS | 50.0% | |
| TCTTTCGAGAAGGGAGGCGA+CGG | + | chr6_3:13112927-13112946 | None:intergenic | 55.0% | |
| TGTTGGTGTGACGGTTGTGG+TGG | + | chr6_3:13112971-13112990 | None:intergenic | 55.0% | |
| GGTTGTTGGTGTGACGGTTG+TGG | + | chr6_3:13112974-13112993 | None:intergenic | 55.0% | |
| CTCAGCCGTTCTGCATGCAA+CGG | - | chr6_3:13113063-13113082 | Msa0940560:CDS | 55.0% | |
| AACGGCTATAGGACCTGTCG+TGG | - | chr6_3:13113081-13113100 | Msa0940560:CDS | 55.0% | |
| ATAGGACCTGTCGTGGACGT+TGG | - | chr6_3:13113088-13113107 | Msa0940560:CDS | 55.0% | |
| GTACATCAGCTAGGTGGGAG+TGG | + | chr6_3:13114871-13114890 | None:intergenic | 55.0% | |
| GCGTGTCTGGTTGATCGATG+TGG | + | chr6_3:13116343-13116362 | None:intergenic | 55.0% | |
| !! | AGAGGCCTTTTGGCTGCTTC+TGG | - | chr6_3:13116650-13116669 | Msa0940560:CDS | 55.0% |
| !! | TGTGGTGGTGGTGGTGGAGA+AGG | + | chr6_3:13112956-13112975 | None:intergenic | 60.0% |
| !! | TGTGACGGTTGTGGTGGTGG+TGG | + | chr6_3:13112965-13112984 | None:intergenic | 60.0% |
| TGGTGTGACGGTTGTGGTGG+TGG | + | chr6_3:13112968-13112987 | None:intergenic | 60.0% | |
| CGTTGCATGCAGAACGGCTG+AGG | + | chr6_3:13113065-13113084 | None:intergenic | 60.0% | |
| AGCGGTGGCTGAAGGATGGG+AGG | + | chr6_3:13112903-13112922 | None:intergenic | 65.0% | |
| GGCAGCGGTGGCTGAAGGAT+GGG | + | chr6_3:13112906-13112925 | None:intergenic | 65.0% | |
| !! | GACGGTTGTGGTGGTGGTGG+TGG | + | chr6_3:13112962-13112981 | None:intergenic | 65.0% |
| CGGCAGCGGTGGCTGAAGGA+TGG | + | chr6_3:13112907-13112926 | None:intergenic | 70.0% | |
| GAGAAGGGAGGCGACGGCAG+CGG | + | chr6_3:13112921-13112940 | None:intergenic | 70.0% | |
| GCGACGGCAGCGGTGGCTGA+AGG | + | chr6_3:13112911-13112930 | None:intergenic | 75.0% | |
| AAGGGAGGCGACGGCAGCGG+TGG | + | chr6_3:13112918-13112937 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 13112685 | 13117064 | 13112685 | ID=Msa0940560;Name=Msa0940560 |
| chr6_3 | mRNA | 13112685 | 13117064 | 13112685 | ID=Msa0940560-mRNA-1;Parent=Msa0940560;Name=Msa0940560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=142|1|1|1|1|1|4|222|492 |
| chr6_3 | exon | 13112685 | 13112946 | 13112685 | ID=Msa0940560-mRNA-1:exon:4280;Parent=Msa0940560-mRNA-1 |
| chr6_3 | exon | 13113056 | 13113296 | 13113056 | ID=Msa0940560-mRNA-1:exon:4279;Parent=Msa0940560-mRNA-1 |
| chr6_3 | exon | 13113797 | 13114442 | 13113797 | ID=Msa0940560-mRNA-1:exon:4278;Parent=Msa0940560-mRNA-1 |
| chr6_3 | exon | 13116371 | 13117064 | 13116371 | ID=Msa0940560-mRNA-1:exon:4277;Parent=Msa0940560-mRNA-1 |
| chr6_3 | five_prime_UTR | 13116923 | 13117064 | 13116923 | ID=Msa0940560-mRNA-1:five_prime_utr;Parent=Msa0940560-mRNA-1 |
| chr6_3 | CDS | 13116371 | 13116922 | 13116371 | ID=Msa0940560-mRNA-1:cds;Parent=Msa0940560-mRNA-1 |
| chr6_3 | CDS | 13113797 | 13114442 | 13113797 | ID=Msa0940560-mRNA-1:cds;Parent=Msa0940560-mRNA-1 |
| chr6_3 | CDS | 13113056 | 13113296 | 13113056 | ID=Msa0940560-mRNA-1:cds;Parent=Msa0940560-mRNA-1 |
| chr6_3 | CDS | 13112907 | 13112946 | 13112907 | ID=Msa0940560-mRNA-1:cds;Parent=Msa0940560-mRNA-1 |
| chr6_3 | three_prime_UTR | 13112685 | 13112906 | 13112685 | ID=Msa0940560-mRNA-1:three_prime_utr;Parent=Msa0940560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
