Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372290 | XP_013461161.1 | 99.675 | 308 | 1 | 0 | 1 | 308 | 1 | 308 | 0.0 | 645 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372290 | sp|F4JJE0|CCT2_ARATH | 72.635 | 296 | 66 | 3 | 16 | 307 | 19 | 303 | 9.78e-157 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372290 | A0A072VAH1 | 99.675 | 308 | 1 | 0 | 1 | 308 | 1 | 308 | 0.0 | 645 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0372290 | Msa0375900 | 0.800125 | 1.668559e-48 | -8.615850e-47 |
| Msa0372290 | Msa0382340 | 0.829946 | 3.873269e-55 | -8.615850e-47 |
| Msa0372290 | Msa0396640 | 0.803086 | 4.122034e-49 | -8.615850e-47 |
| Msa0372290 | Msa0420530 | 0.983432 | 1.000237e-157 | -8.615850e-47 |
| Msa0372290 | Msa0444170 | 0.815498 | 8.962954e-52 | -8.615850e-47 |
| Msa0372290 | Msa0466780 | 0.989036 | 1.983871e-176 | -8.615850e-47 |
| Msa0372290 | Msa0476710 | 0.813216 | 2.863386e-51 | -8.615850e-47 |
| Msa0372290 | Msa0491730 | 0.823432 | 1.389808e-53 | -8.615850e-47 |
| Msa0372290 | Msa0521040 | 0.815520 | 8.865139e-52 | -8.615850e-47 |
| Msa0372290 | Msa0758300 | 0.804690 | 1.914172e-49 | -8.615850e-47 |
| Msa0372290 | Msa1002780 | 0.805136 | 1.544518e-49 | -8.615850e-47 |
| Msa0372290 | Msa1064990 | 0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa0372290 | Msa1407680 | 0.804607 | 1.992180e-49 | -8.615850e-47 |
| Msa0372290 | Msa1449760 | 0.806881 | 6.631401e-50 | -8.615850e-47 |
| Msa0350070 | Msa0372290 | 0.817592 | 3.045009e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372290 | MtrunA17_Chr3g0120311 | 99.675 | 308 | 1 | 0 | 1 | 308 | 1 | 308 | 0.0 | 645 |
| Msa0372290 | MtrunA17_Chr2g0297021 | 83.673 | 245 | 36 | 1 | 15 | 255 | 13 | 257 | 9.53e-157 | 439 |
| Msa0372290 | MtrunA17_Chr4g0032051 | 65.269 | 167 | 50 | 3 | 115 | 277 | 23 | 185 | 9.34e-59 | 187 |
| Msa0372290 | MtrunA17_Chr4g0032041 | 80.822 | 73 | 14 | 0 | 68 | 140 | 1 | 73 | 1.30e-38 | 135 |
| Msa0372290 | MtrunA17_Chr8g0389111 | 42.759 | 145 | 75 | 3 | 18 | 158 | 65 | 205 | 1.33e-27 | 110 |
| Msa0372290 | MtrunA17_Chr8g0389111 | 33.129 | 163 | 102 | 4 | 11 | 171 | 249 | 406 | 4.93e-18 | 84.0 |
| Msa0372290 | MtrunA17_Chr7g0245591 | 40.141 | 142 | 77 | 3 | 16 | 153 | 53 | 190 | 8.63e-27 | 108 |
| Msa0372290 | MtrunA17_Chr7g0245591 | 36.893 | 103 | 59 | 3 | 11 | 111 | 251 | 349 | 2.63e-13 | 70.1 |
| Msa0372290 | MtrunA17_Chr4g0032031 | 72.340 | 47 | 12 | 1 | 15 | 61 | 13 | 58 | 8.41e-19 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372290 | AT2G32260.1 | 75.887 | 282 | 53 | 3 | 12 | 292 | 29 | 296 | 1.09e-157 | 444 |
| Msa0372290 | AT2G32260.2 | 74.000 | 250 | 50 | 3 | 44 | 292 | 12 | 247 | 3.65e-133 | 379 |
| Msa0372290 | AT2G38670.1 | 37.037 | 162 | 91 | 4 | 16 | 173 | 53 | 207 | 7.72e-26 | 106 |
| Msa0372290 | AT2G38670.1 | 32.927 | 164 | 103 | 4 | 11 | 171 | 250 | 409 | 8.72e-17 | 80.9 |
Find 92 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACTAGTGTTTCAATTTA+AGG | 0.078305 | 3_1:+70621475 | Msa0372290:five_prime_UTR |
| TTGTGTCTTTCCCATTATTC+TGG | 0.120099 | 3_1:-70624746 | None:intergenic |
| TAAGGCAGTTGGAAGATTTA+AGG | 0.165025 | 3_1:+70623252 | Msa0372290:CDS |
| CTACAACAAGCAAATTTAAT+AGG | 0.175743 | 3_1:-70625228 | None:intergenic |
| AAAACATAGGCGTACATAAA+TGG | 0.237318 | 3_1:+70624771 | Msa0372290:exon |
| GAGCTTAATCCCCAGAATAA+TGG | 0.309971 | 3_1:+70624735 | Msa0372290:CDS |
| TGCAGATATTCTCACCCTTC+AGG | 0.311214 | 3_1:-70625133 | None:intergenic |
| ACACGAACGGGGCGGTCTTC+AGG | 0.322066 | 3_1:-70621679 | None:intergenic |
| TGTGTCTTTCCCATTATTCT+GGG | 0.326421 | 3_1:-70624745 | None:intergenic |
| CCGAATACGTATCTTCTTGT+TGG | 0.342507 | 3_1:+70621865 | Msa0372290:CDS |
| CAGCATTCTTTGCAACAGTT+TGG | 0.345244 | 3_1:-70624350 | None:intergenic |
| CGGAGGGAGGTGAGGGATGG+TGG | 0.352026 | 3_1:-70621656 | None:intergenic |
| CTAATCAGAAACAGAAGTTC+AGG | 0.367574 | 3_1:-70624982 | None:intergenic |
| TAGGAGACTGAAAACTTTGC+AGG | 0.370109 | 3_1:+70623569 | Msa0372290:CDS |
| TACAACAAGCAAATTTAATA+GGG | 0.374556 | 3_1:-70625227 | None:intergenic |
| AGCTTAATCCCCAGAATAAT+GGG | 0.375260 | 3_1:+70624736 | Msa0372290:CDS |
| CATCCACACCAACTTGAGAT+AGG | 0.376912 | 3_1:+70625108 | Msa0372290:three_prime_UTR |
| CGAATTCAAGAAAGTTTAAG+AGG | 0.377769 | 3_1:+70624588 | Msa0372290:CDS |
| TAAATTAGCTCACCATCTTA+TGG | 0.378937 | 3_1:-70624449 | None:intergenic |
| AAGACATAATGCTGAAAATT+CGG | 0.381602 | 3_1:-70624927 | None:intergenic |
| CCAGTATGTGCTGCGTAACT+TGG | 0.384421 | 3_1:+70623339 | Msa0372290:CDS |
| AATGGGAATGAAATATTTGA+TGG | 0.404313 | 3_1:+70625283 | Msa0372290:three_prime_UTR |
| TTCTTGAATTCGATCACATA+TGG | 0.409337 | 3_1:-70624577 | None:intergenic |
| AAAAGCGATTGCGCGTGAAT+AGG | 0.423820 | 3_1:+70623550 | Msa0372290:CDS |
| ATGTTCAGATTACTAGTAAT+GGG | 0.426716 | 3_1:+70625266 | Msa0372290:three_prime_UTR |
| AATGCTGATCGTATGGTTGC+TGG | 0.428726 | 3_1:+70624399 | Msa0372290:CDS |
| CCATCGGCGTAGACACGAAC+GGG | 0.432123 | 3_1:-70621691 | None:intergenic |
| TATGTTCAGATTACTAGTAA+TGG | 0.442651 | 3_1:+70625265 | Msa0372290:three_prime_UTR |
| TTTCTAGAAATGTTTGAAGA+AGG | 0.447857 | 3_1:+70624423 | Msa0372290:CDS |
| GGCGGTCTTCAGGCGGAGGG+AGG | 0.449702 | 3_1:-70621669 | None:intergenic |
| GCAGATATTCTCACCCTTCA+GGG | 0.454665 | 3_1:-70625132 | None:intergenic |
| TCCGATCCCGATTGATTGAT+CGG | 0.464162 | 3_1:-70621617 | None:intergenic |
| CCAACAAGAAGATACGTATT+CGG | 0.465493 | 3_1:-70621865 | None:intergenic |
| CCAAGTTACGCAGCACATAC+TGG | 0.466391 | 3_1:-70623339 | None:intergenic |
| ACGGGGCGGTCTTCAGGCGG+AGG | 0.467160 | 3_1:-70621673 | None:intergenic |
| TTAATAACCCAAGGTGCATC+AGG | 0.470523 | 3_1:-70622097 | None:intergenic |
| TCTTCAGGCGGAGGGAGGTG+AGG | 0.478400 | 3_1:-70621664 | None:intergenic |
| CCCGTTCGTGTCTACGCCGA+TGG | 0.493933 | 3_1:+70621691 | Msa0372290:CDS |
| CTTCAGGCGGAGGGAGGTGA+GGG | 0.499646 | 3_1:-70621663 | None:intergenic |
| TCGATGCAGGTTAAGGCAGT+TGG | 0.503231 | 3_1:+70623241 | Msa0372290:intron |
| AGTAAGAGAACAGCAAGAAA+AGG | 0.505554 | 3_1:+70623596 | Msa0372290:CDS |
| AAGGCAAGGAAAATAGTAAA+CGG | 0.512658 | 3_1:+70621494 | Msa0372290:five_prime_UTR |
| TAGTGTTTCAATTTAAGGCA+AGG | 0.522430 | 3_1:+70621480 | Msa0372290:five_prime_UTR |
| AACTTGAGATAGGGCCCTGA+AGG | 0.523113 | 3_1:+70625118 | Msa0372290:three_prime_UTR |
| CAAACTGTTGCAAAGAATGC+TGG | 0.524421 | 3_1:+70624351 | Msa0372290:CDS |
| AGTGATACCTGATGCACCTT+GGG | 0.526304 | 3_1:+70622090 | Msa0372290:CDS |
| ATCTACGATCTCTTTCACTT+CGG | 0.528928 | 3_1:+70621715 | Msa0372290:CDS |
| TGAAGAAGGTTGCCATAAGA+TGG | 0.533046 | 3_1:+70624437 | Msa0372290:CDS |
| AGGCGGAGGGAGGTGAGGGA+TGG | 0.533317 | 3_1:-70621659 | None:intergenic |
| ACATGTTTCAATGTTGCAGA+AGG | 0.535526 | 3_1:+70624880 | Msa0372290:three_prime_UTR |
| GGCCCTATCTCAAGTTGGTG+TGG | 0.535808 | 3_1:-70625111 | None:intergenic |
| ATCTGCATTTCATTGCTGCA+TGG | 0.537462 | 3_1:+70625149 | Msa0372290:three_prime_UTR |
| TAATCAGAAACAGAAGTTCA+GGG | 0.552670 | 3_1:-70624981 | None:intergenic |
| GCGGTGACACATAAGTATAA+AGG | 0.555192 | 3_1:+70621901 | Msa0372290:CDS |
| GTGTCTTTCCCATTATTCTG+GGG | 0.556779 | 3_1:-70624744 | None:intergenic |
| GACCACACCAGCAAAATTGA+AGG | 0.558429 | 3_1:-70624905 | None:intergenic |
| ATCCACACCAACTTGAGATA+GGG | 0.562958 | 3_1:+70625109 | Msa0372290:three_prime_UTR |
| CCTTGGTGTGAGCTATGTTA+AGG | 0.570180 | 3_1:+70623384 | Msa0372290:CDS |
| CGGGGCGGTCTTCAGGCGGA+GGG | 0.571575 | 3_1:-70621672 | None:intergenic |
| AAGGAAACTCAACGGACTGA+AGG | 0.571851 | 3_1:+70623271 | Msa0372290:CDS |
| ACATAAGTATAAAGGCAAAA+CGG | 0.573897 | 3_1:+70621909 | Msa0372290:CDS |
| ACCGATCAATCAATCGGGAT+CGG | 0.575733 | 3_1:+70621616 | Msa0372290:five_prime_UTR |
| CAGAAACAGAAGTTCAGGGC+AGG | 0.577238 | 3_1:-70624977 | None:intergenic |
| TTCAGGGCCCTATCTCAAGT+TGG | 0.580744 | 3_1:-70625116 | None:intergenic |
| ATGGGAATGAAATATTTGAT+GGG | 0.581098 | 3_1:+70625284 | Msa0372290:three_prime_UTR |
| CATGTTTCAATGTTGCAGAA+GGG | 0.585696 | 3_1:+70624881 | Msa0372290:three_prime_UTR |
| AACTCTTGATTAATAACCCA+AGG | 0.585926 | 3_1:-70622106 | None:intergenic |
| TGCTGCGTAACTTGGATCGT+GGG | 0.587350 | 3_1:+70623347 | Msa0372290:CDS |
| CAAAGAATGCTGGTATGCAT+CGG | 0.589636 | 3_1:+70624361 | Msa0372290:CDS |
| GTGCTGCGTAACTTGGATCG+TGG | 0.590786 | 3_1:+70623346 | Msa0372290:CDS |
| CGAACGGGGCGGTCTTCAGG+CGG | 0.603007 | 3_1:-70621676 | None:intergenic |
| CTACATCAGATATAATAATG+AGG | 0.605020 | 3_1:+70623299 | Msa0372290:CDS |
| GAAAGACACAAACAAAACAT+AGG | 0.607776 | 3_1:+70624758 | Msa0372290:CDS |
| CTGGTATGCATCGGAATGAG+TGG | 0.622437 | 3_1:+70624370 | Msa0372290:CDS |
| TCCATCGGCGTAGACACGAA+CGG | 0.624413 | 3_1:-70621692 | None:intergenic |
| CTTGTTCAAGAGAACGAGCG+TGG | 0.627702 | 3_1:-70621738 | None:intergenic |
| GGTGGAAAATGCTGATCGTA+TGG | 0.628102 | 3_1:+70624392 | Msa0372290:CDS |
| AGAGTATTATGATGATCATG+AGG | 0.628279 | 3_1:+70624668 | Msa0372290:CDS |
| ACTTGAGATAGGGCCCTGAA+GGG | 0.630602 | 3_1:+70625119 | Msa0372290:three_prime_UTR |
| AAGTGATACCTGATGCACCT+TGG | 0.631700 | 3_1:+70622089 | Msa0372290:CDS |
| AAAGAGATCGTAGATTCCAT+CGG | 0.647768 | 3_1:-70621707 | None:intergenic |
| GAAGATTTAAGGAAACTCAA+CGG | 0.652437 | 3_1:+70623263 | Msa0372290:CDS |
| GTATTATGATGATCATGAGG+AGG | 0.659585 | 3_1:+70624671 | Msa0372290:CDS |
| GACAGATATGCTGATACAAG+TGG | 0.674347 | 3_1:+70623107 | Msa0372290:intron |
| TCAAAATGGTAAGGATGACG+AGG | 0.681849 | 3_1:+70624641 | Msa0372290:CDS |
| GGGTACTCAAGAAAAGACCT+TGG | 0.686439 | 3_1:+70623367 | Msa0372290:CDS |
| TGGTATGCATCGGAATGAGT+GGG | 0.694195 | 3_1:+70624371 | Msa0372290:CDS |
| TGTTGGATGCTGCAGCGATG+CGG | 0.696674 | 3_1:+70621882 | Msa0372290:CDS |
| CGGCGTAGACACGAACGGGG+CGG | 0.716260 | 3_1:-70621687 | None:intergenic |
| CATCGGCGTAGACACGAACG+GGG | 0.729172 | 3_1:-70621690 | None:intergenic |
| CCTTAACATAGCTCACACCA+AGG | 0.731539 | 3_1:-70623384 | None:intergenic |
| TATGCATCGGAATGAGTGGG+TGG | 0.732959 | 3_1:+70624374 | Msa0372290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATCACTTTTTTTTTTA+TGG | + | chr3_1:70621830-70621849 | Msa0372290:intron | 10.0% |
| !!! | TTGATGTATATATTTTTTTT+TGG | + | chr3_1:70622047-70622066 | Msa0372290:intron | 10.0% |
| !!! | TGATGTATATATTTTTTTTT+GGG | + | chr3_1:70622048-70622067 | Msa0372290:intron | 10.0% |
| !! | TAAAAGTTATATTTGAAAAT+TGG | + | chr3_1:70622454-70622473 | Msa0372290:intron | 10.0% |
| !! | ATAAAATAATCGATTAATTG+AGG | - | chr3_1:70621811-70621830 | None:intergenic | 15.0% |
| !! | CTTATATTAATGAATTGAAT+TGG | - | chr3_1:70622377-70622396 | None:intergenic | 15.0% |
| !! | ATTTGATGTTAGTATAAAAT+TGG | + | chr3_1:70622768-70622787 | Msa0372290:intron | 15.0% |
| !! | ATGTAAAATCTATGATTTAA+AGG | - | chr3_1:70622814-70622833 | None:intergenic | 15.0% |
| !!! | ATTAATACAATTTTTTCGTT+CGG | - | chr3_1:70622850-70622869 | None:intergenic | 15.0% |
| !! | TGAAATTTAAAGGAAAATTA+AGG | - | chr3_1:70623189-70623208 | None:intergenic | 15.0% |
| !!! | AATTTTCCTTTAAATTTCAT+TGG | + | chr3_1:70623190-70623209 | Msa0372290:intron | 15.0% |
| !!! | ATTTTCCTTTAAATTTCATT+GGG | + | chr3_1:70623191-70623210 | Msa0372290:intron | 15.0% |
| !!! | AAAATATATTGAACATTTTG+AGG | - | chr3_1:70625079-70625098 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTGTTAATGTAAT+TGG | + | chr3_1:70622018-70622037 | Msa0372290:intron | 20.0% |
| !! | TACTTATAAACTATAAAGCA+CGG | - | chr3_1:70622332-70622351 | None:intergenic | 20.0% |
| !! | AATGAATTGAATTGGAATAA+AGG | - | chr3_1:70622369-70622388 | None:intergenic | 20.0% |
| !!! | AGGTGTATTTTAGTAAATTT+TGG | + | chr3_1:70622506-70622525 | Msa0372290:intron | 20.0% |
| !!! | GCTGTATTTTTTAGTTTAAA+GGG | + | chr3_1:70622618-70622637 | Msa0372290:intron | 20.0% |
| !! | ATTTAAAGGAAATACATTGT+TGG | - | chr3_1:70622800-70622819 | None:intergenic | 20.0% |
| !! | AAATACAAATGTAAGTTTGA+CGG | - | chr3_1:70623877-70623896 | None:intergenic | 20.0% |
| !! | AAGTAGATTATCAAAACTTA+AGG | + | chr3_1:70624196-70624215 | Msa0372290:intron | 20.0% |
| !! | GAAAAAAGTTTAAAAGCTAT+AGG | - | chr3_1:70624517-70624536 | None:intergenic | 20.0% |
| !!! | AGAAAAATTGATTCATCATT+TGG | - | chr3_1:70624621-70624640 | None:intergenic | 20.0% |
| !!! | GAATCAATTTTTCTTCAAAA+TGG | + | chr3_1:70624627-70624646 | Msa0372290:CDS | 20.0% |
| !!! | AATTTTTCTTCAAAATGGTA+AGG | + | chr3_1:70624632-70624651 | Msa0372290:CDS | 20.0% |
| !! | TACAACAAGCAAATTTAATA+GGG | - | chr3_1:70625230-70625249 | None:intergenic | 20.0% |
| !!! | TAATGGAGATTACGATTTTT+TGG | - | chr3_1:70621764-70621783 | None:intergenic | 25.0% |
| ! | AAGTAGAGAATAAAGAGTAA+TGG | - | chr3_1:70621781-70621800 | None:intergenic | 25.0% |
| ! | ACATAAGTATAAAGGCAAAA+CGG | + | chr3_1:70621909-70621928 | Msa0372290:CDS | 25.0% |
| ! | TATACAAAAACGAAACGAAA+TGG | - | chr3_1:70622185-70622204 | None:intergenic | 25.0% |
| ! | TTAATATAAGTACCTTTGTC+CGG | + | chr3_1:70622387-70622406 | Msa0372290:intron | 25.0% |
| ! | GCTTTAATATGAGTTATTCA+TGG | + | chr3_1:70622410-70622429 | Msa0372290:intron | 25.0% |
| !!! | AGGATAAATTGAAAAGCATT+CGG | - | chr3_1:70622555-70622574 | None:intergenic | 25.0% |
| !! | AATTGTTGTTATACCATACA+TGG | - | chr3_1:70622579-70622598 | None:intergenic | 25.0% |
| ! | TGGTATAACAACAATTGAAA+TGG | + | chr3_1:70622583-70622602 | Msa0372290:intron | 25.0% |
| ! | ATTGAAATGGATATCTTCTT+AGG | + | chr3_1:70622596-70622615 | Msa0372290:intron | 25.0% |
| !!! | GGCTGTATTTTTTAGTTTAA+AGG | + | chr3_1:70622617-70622636 | Msa0372290:intron | 25.0% |
| !! | ACCCATGATTTCTATTTTAT+TGG | + | chr3_1:70623021-70623040 | Msa0372290:intron | 25.0% |
| ! | GCCAATAAAATAGAAATCAT+GGG | - | chr3_1:70623025-70623044 | None:intergenic | 25.0% |
| ! | TGCCAATAAAATAGAAATCA+TGG | - | chr3_1:70623026-70623045 | None:intergenic | 25.0% |
| ! | CTACATCAGATATAATAATG+AGG | + | chr3_1:70623299-70623318 | Msa0372290:CDS | 25.0% |
| ! | CAAATGGTAGACAATATTAA+GGG | - | chr3_1:70623485-70623504 | None:intergenic | 25.0% |
| ! | TCAAATGGTAGACAATATTA+AGG | - | chr3_1:70623486-70623505 | None:intergenic | 25.0% |
| ! | TTAATATTGTCTACCATTTG+AGG | + | chr3_1:70623485-70623504 | Msa0372290:intron | 25.0% |
| !! | GTTCATTTTAAATACCAACA+CGG | - | chr3_1:70623527-70623546 | None:intergenic | 25.0% |
| !! | TGTTGGTATTTAAAATGAAC+AGG | + | chr3_1:70623527-70623546 | Msa0372290:intron | 25.0% |
| ! | TACAACTTAGTCAAATGATA+TGG | - | chr3_1:70623653-70623672 | None:intergenic | 25.0% |
| ! | AGTGAAAAAAGATCATAGAA+TGG | + | chr3_1:70623722-70623741 | Msa0372290:intron | 25.0% |
| ! | TTCCCTATTTATTACTTTGA+TGG | + | chr3_1:70623800-70623819 | Msa0372290:intron | 25.0% |
| ! | CTCCATCAAAGTAATAAATA+GGG | - | chr3_1:70623805-70623824 | None:intergenic | 25.0% |
| ! | TTTCTTGCAATGTTTGTTTA+AGG | + | chr3_1:70623896-70623915 | Msa0372290:intron | 25.0% |
| ! | TCTATATTCATTGGGTATTT+GGG | - | chr3_1:70624016-70624035 | None:intergenic | 25.0% |
| ! | TTCTATATTCATTGGGTATT+TGG | - | chr3_1:70624017-70624036 | None:intergenic | 25.0% |
| ! | AAAATTATGGCTACCTTATA+TGG | - | chr3_1:70624100-70624119 | None:intergenic | 25.0% |
| !!! | GCCATAATTTTAACTTTGTT+TGG | + | chr3_1:70624109-70624128 | Msa0372290:intron | 25.0% |
| ! | GCCAAACAAAGTTAAAATTA+TGG | - | chr3_1:70624113-70624132 | None:intergenic | 25.0% |
| ! | ATATATGAAGGCAATGTTTA+AGG | + | chr3_1:70624136-70624155 | Msa0372290:intron | 25.0% |
| ! | TATATGAAGGCAATGTTTAA+GGG | + | chr3_1:70624137-70624156 | Msa0372290:intron | 25.0% |
| !! | TTTCTAGAAATGTTTGAAGA+AGG | + | chr3_1:70624423-70624442 | Msa0372290:CDS | 25.0% |
| ! | AAGACATAATGCTGAAAATT+CGG | - | chr3_1:70624930-70624949 | None:intergenic | 25.0% |
| !! | TTTTCTACCTACATTTAACA+TGG | - | chr3_1:70625181-70625200 | None:intergenic | 25.0% |
| ! | CTACAACAAGCAAATTTAAT+AGG | - | chr3_1:70625231-70625250 | None:intergenic | 25.0% |
| ! | TATGTTCAGATTACTAGTAA+TGG | + | chr3_1:70625265-70625284 | Msa0372290:three_prime_UTR | 25.0% |
| ! | ATGTTCAGATTACTAGTAAT+GGG | + | chr3_1:70625266-70625285 | Msa0372290:three_prime_UTR | 25.0% |
| ! | AATGGGAATGAAATATTTGA+TGG | + | chr3_1:70625283-70625302 | Msa0372290:three_prime_UTR | 25.0% |
| ! | ATGGGAATGAAATATTTGAT+GGG | + | chr3_1:70625284-70625303 | Msa0372290:three_prime_UTR | 25.0% |
| GCAACTAGTGTTTCAATTTA+AGG | + | chr3_1:70621475-70621494 | Msa0372290:five_prime_UTR | 30.0% | |
| ! | TAGTGTTTCAATTTAAGGCA+AGG | + | chr3_1:70621480-70621499 | Msa0372290:five_prime_UTR | 30.0% |
| AAGGCAAGGAAAATAGTAAA+CGG | + | chr3_1:70621494-70621513 | Msa0372290:five_prime_UTR | 30.0% | |
| !! | TTGATTGATCGGTTTTTGTT+CGG | - | chr3_1:70621609-70621628 | None:intergenic | 30.0% |
| ACAAAAACCGATCAATCAAT+CGG | + | chr3_1:70621610-70621629 | Msa0372290:five_prime_UTR | 30.0% | |
| !!! | TTTTTTTTTGGGCATGTAGA+TGG | + | chr3_1:70622059-70622078 | Msa0372290:intron | 30.0% |
| !!! | TTTTTTTTGGGCATGTAGAT+GGG | + | chr3_1:70622060-70622079 | Msa0372290:intron | 30.0% |
| AACTCTTGATTAATAACCCA+AGG | - | chr3_1:70622109-70622128 | None:intergenic | 30.0% | |
| ! | GAATGATGTCATTTGCTTAA+AGG | + | chr3_1:70622279-70622298 | Msa0372290:intron | 30.0% |
| TAATATAAGTACCTTTGTCC+GGG | + | chr3_1:70622388-70622407 | Msa0372290:intron | 30.0% | |
| GAATAACTCATATTAAAGCC+CGG | - | chr3_1:70622409-70622428 | None:intergenic | 30.0% | |
| TTAAAACTGATGATTTGACG+TGG | - | chr3_1:70622710-70622729 | None:intergenic | 30.0% | |
| TAAAATGTAGTTACACGAGT+CGG | + | chr3_1:70622727-70622746 | Msa0372290:intron | 30.0% | |
| TCCTGCTTATTTAATGTCTA+TGG | + | chr3_1:70622884-70622903 | Msa0372290:intron | 30.0% | |
| TCCATAGACATTAAATAAGC+AGG | - | chr3_1:70622888-70622907 | None:intergenic | 30.0% | |
| TACCTAAGAACTAAGAGTTA+GGG | - | chr3_1:70622988-70623007 | None:intergenic | 30.0% | |
| ACATTTCATTGCAAAAACCA+AGG | - | chr3_1:70623086-70623105 | None:intergenic | 30.0% | |
| GAAGATTTAAGGAAACTCAA+CGG | + | chr3_1:70623263-70623282 | Msa0372290:CDS | 30.0% | |
| GCTCCATCAAAGTAATAAAT+AGG | - | chr3_1:70623806-70623825 | None:intergenic | 30.0% | |
| ! | CACAAAATTTTACAGCTCAT+GGG | - | chr3_1:70623967-70623986 | None:intergenic | 30.0% |
| ! | CATGAGCTGTAAAATTTTGT+GGG | + | chr3_1:70623966-70623985 | Msa0372290:intron | 30.0% |
| ! | ATGAGCTGTAAAATTTTGTG+GGG | + | chr3_1:70623967-70623986 | Msa0372290:intron | 30.0% |
| ATACCCAATGAATATAGAAG+TGG | + | chr3_1:70624018-70624037 | Msa0372290:intron | 30.0% | |
| TCTCCACTTCTATATTCATT+GGG | - | chr3_1:70624024-70624043 | None:intergenic | 30.0% | |
| TTGTTTGGCAGTATATATGA+AGG | + | chr3_1:70624124-70624143 | Msa0372290:intron | 30.0% | |
| TCACTCGCAACTATAATTTA+TGG | + | chr3_1:70624252-70624271 | Msa0372290:intron | 30.0% | |
| !!! | GCAGGTAATTTTAAAATGCA+TGG | - | chr3_1:70624280-70624299 | None:intergenic | 30.0% |
| !!! | CATTTTAAAATTACCTGCAG+TGG | + | chr3_1:70624282-70624301 | Msa0372290:intron | 30.0% |
| TAAATTAGCTCACCATCTTA+TGG | - | chr3_1:70624452-70624471 | None:intergenic | 30.0% | |
| TTCTTGAATTCGATCACATA+TGG | - | chr3_1:70624580-70624599 | None:intergenic | 30.0% | |
| CGAATTCAAGAAAGTTTAAG+AGG | + | chr3_1:70624588-70624607 | Msa0372290:CDS | 30.0% | |
| ! | AGAGTATTATGATGATCATG+AGG | + | chr3_1:70624668-70624687 | Msa0372290:CDS | 30.0% |
| GAAAGACACAAACAAAACAT+AGG | + | chr3_1:70624758-70624777 | Msa0372290:CDS | 30.0% | |
| AAAACATAGGCGTACATAAA+TGG | + | chr3_1:70624771-70624790 | Msa0372290:exon | 30.0% | |
| TAATCAGAAACAGAAGTTCA+GGG | - | chr3_1:70624984-70625003 | None:intergenic | 30.0% | |
| ! | GTTTTTGCCATGTTAAATGT+AGG | + | chr3_1:70625171-70625190 | Msa0372290:three_prime_UTR | 30.0% |
| ATAAAAAAGCGGAAACAACG+CGG | + | chr3_1:70621539-70621558 | Msa0372290:five_prime_UTR | 35.0% | |
| CAAAAACCGATCAATCAATC+GGG | + | chr3_1:70621611-70621630 | Msa0372290:five_prime_UTR | 35.0% | |
| AAAGAGATCGTAGATTCCAT+CGG | - | chr3_1:70621710-70621729 | None:intergenic | 35.0% | |
| ATCTACGATCTCTTTCACTT+CGG | + | chr3_1:70621715-70621734 | Msa0372290:CDS | 35.0% | |
| CCAACAAGAAGATACGTATT+CGG | - | chr3_1:70621868-70621887 | None:intergenic | 35.0% | |
| CGAAACGAAATGGAATCTTA+CGG | - | chr3_1:70622175-70622194 | None:intergenic | 35.0% | |
| TCAATTTATCCTGCCATGTA+TGG | + | chr3_1:70622563-70622582 | Msa0372290:intron | 35.0% | |
| TGTAAAACTAAGTTGCACTG+TGG | - | chr3_1:70622658-70622677 | None:intergenic | 35.0% | |
| AGAACACTCTCATTAGATGT+CGG | - | chr3_1:70622681-70622700 | None:intergenic | 35.0% | |
| AAAATGTAGTTACACGAGTC+GGG | + | chr3_1:70622728-70622747 | Msa0372290:intron | 35.0% | |
| GTACCTAAGAACTAAGAGTT+AGG | - | chr3_1:70622989-70623008 | None:intergenic | 35.0% | |
| GCAGTCCCAATGAAATTTAA+AGG | - | chr3_1:70623199-70623218 | None:intergenic | 35.0% | |
| TATGATTTCGATGCAGGTTA+AGG | + | chr3_1:70623234-70623253 | Msa0372290:intron | 35.0% | |
| TAAGGCAGTTGGAAGATTTA+AGG | + | chr3_1:70623252-70623271 | Msa0372290:CDS | 35.0% | |
| ! | GCTATGTTAAGGTGTGATTT+TGG | + | chr3_1:70623395-70623414 | Msa0372290:intron | 35.0% |
| ATATTGTCTACCATTTGAGG+AGG | + | chr3_1:70623488-70623507 | Msa0372290:intron | 35.0% | |
| AGTAAGAGAACAGCAAGAAA+AGG | + | chr3_1:70623596-70623615 | Msa0372290:CDS | 35.0% | |
| !! | CAAGAAAAGGTTGGTGTAAA+AGG | + | chr3_1:70623609-70623628 | Msa0372290:intron | 35.0% |
| CTTCCACAAGTTCAACTATT+AGG | + | chr3_1:70623833-70623852 | Msa0372290:intron | 35.0% | |
| GAACCTAATAGTTGAACTTG+TGG | - | chr3_1:70623839-70623858 | None:intergenic | 35.0% | |
| ! | CCACAAAATTTTACAGCTCA+TGG | - | chr3_1:70623968-70623987 | None:intergenic | 35.0% |
| ! | CCATGAGCTGTAAAATTTTG+TGG | + | chr3_1:70623965-70623984 | Msa0372290:intron | 35.0% |
| TTGTGGGGTAAATAAAAGAG+TGG | + | chr3_1:70623982-70624001 | Msa0372290:intron | 35.0% | |
| TGTGGGGTAAATAAAAGAGT+GGG | + | chr3_1:70623983-70624002 | Msa0372290:intron | 35.0% | |
| GTCTCCACTTCTATATTCAT+TGG | - | chr3_1:70624025-70624044 | None:intergenic | 35.0% | |
| ACCTCAAATATTTGTGCAGT+AGG | + | chr3_1:70624219-70624238 | Msa0372290:intron | 35.0% | |
| TAAAATTACCTGCAGTGGAT+TGG | + | chr3_1:70624287-70624306 | Msa0372290:intron | 35.0% | |
| GTATTATGATGATCATGAGG+AGG | + | chr3_1:70624671-70624690 | Msa0372290:CDS | 35.0% | |
| AGCTTAATCCCCAGAATAAT+GGG | + | chr3_1:70624736-70624755 | Msa0372290:CDS | 35.0% | |
| TGTGTCTTTCCCATTATTCT+GGG | - | chr3_1:70624748-70624767 | None:intergenic | 35.0% | |
| TTGTGTCTTTCCCATTATTC+TGG | - | chr3_1:70624749-70624768 | None:intergenic | 35.0% | |
| ACATGTTTCAATGTTGCAGA+AGG | + | chr3_1:70624880-70624899 | Msa0372290:three_prime_UTR | 35.0% | |
| CATGTTTCAATGTTGCAGAA+GGG | + | chr3_1:70624881-70624900 | Msa0372290:three_prime_UTR | 35.0% | |
| CTAATCAGAAACAGAAGTTC+AGG | - | chr3_1:70624985-70625004 | None:intergenic | 35.0% | |
| CCGAATACGTATCTTCTTGT+TGG | + | chr3_1:70621865-70621884 | Msa0372290:CDS | 40.0% | |
| GCGGTGACACATAAGTATAA+AGG | + | chr3_1:70621901-70621920 | Msa0372290:CDS | 40.0% | |
| TTAATAACCCAAGGTGCATC+AGG | - | chr3_1:70622100-70622119 | None:intergenic | 40.0% | |
| TCATATTAAAGCCCGGACAA+AGG | - | chr3_1:70622402-70622421 | None:intergenic | 40.0% | |
| TTGACGTAAACGAGTGTGTT+AGG | + | chr3_1:70622486-70622505 | Msa0372290:intron | 40.0% | |
| GTTGTTATACCATACATGGC+AGG | - | chr3_1:70622575-70622594 | None:intergenic | 40.0% | |
| TAGGGAGTTGCAACAAGAAA+TGG | - | chr3_1:70622970-70622989 | None:intergenic | 40.0% | |
| ! | CTCCCTAACTCTTAGTTCTT+AGG | + | chr3_1:70622983-70623002 | Msa0372290:intron | 40.0% |
| GCATTATGTAGCTAATGCCT+TGG | + | chr3_1:70623066-70623085 | Msa0372290:intron | 40.0% | |
| GACAGATATGCTGATACAAG+TGG | + | chr3_1:70623107-70623126 | Msa0372290:intron | 40.0% | |
| GTGTTGTATGATTTCGATGC+AGG | + | chr3_1:70623228-70623247 | Msa0372290:intron | 40.0% | |
| AACATAAGCTCCTCCTCAAA+TGG | - | chr3_1:70623501-70623520 | None:intergenic | 40.0% | |
| ! | GAGCTTATGTTTTTCCGTGT+TGG | + | chr3_1:70623510-70623529 | Msa0372290:intron | 40.0% |
| TAGGAGACTGAAAACTTTGC+AGG | + | chr3_1:70623569-70623588 | Msa0372290:CDS | 40.0% | |
| AGAGAACAGCAAGAAAAGGT+TGG | + | chr3_1:70623600-70623619 | Msa0372290:intron | 40.0% | |
| !! | TAGAATGGTAGTTCTAGCTG+TGG | + | chr3_1:70623737-70623756 | Msa0372290:intron | 40.0% |
| TCATGGGATGCGAACAAAAA+AGG | - | chr3_1:70623951-70623970 | None:intergenic | 40.0% | |
| GCTAAATGTAGATCGTGAGA+AGG | + | chr3_1:70624054-70624073 | Msa0372290:intron | 40.0% | |
| TGCATGGGTACTACCATATA+AGG | + | chr3_1:70624084-70624103 | Msa0372290:intron | 40.0% | |
| GCCTACTGCACAAATATTTG+AGG | - | chr3_1:70624223-70624242 | None:intergenic | 40.0% | |
| TCAAAATTCCAATCCACTGC+AGG | - | chr3_1:70624298-70624317 | None:intergenic | 40.0% | |
| CAGCATTCTTTGCAACAGTT+TGG | - | chr3_1:70624353-70624372 | None:intergenic | 40.0% | |
| CAAACTGTTGCAAAGAATGC+TGG | + | chr3_1:70624351-70624370 | Msa0372290:CDS | 40.0% | |
| CAAAGAATGCTGGTATGCAT+CGG | + | chr3_1:70624361-70624380 | Msa0372290:CDS | 40.0% | |
| TGAAGAAGGTTGCCATAAGA+TGG | + | chr3_1:70624437-70624456 | Msa0372290:CDS | 40.0% | |
| TCACTGCATGGGTATATTTC+AGG | + | chr3_1:70624548-70624567 | Msa0372290:intron | 40.0% | |
| CACTGCATGGGTATATTTCA+GGG | + | chr3_1:70624549-70624568 | Msa0372290:intron | 40.0% | |
| ACTGCATGGGTATATTTCAG+GGG | + | chr3_1:70624550-70624569 | Msa0372290:intron | 40.0% | |
| TCAAAATGGTAAGGATGACG+AGG | + | chr3_1:70624641-70624660 | Msa0372290:CDS | 40.0% | |
| GAGCTTAATCCCCAGAATAA+TGG | + | chr3_1:70624735-70624754 | Msa0372290:CDS | 40.0% | |
| GTGTCTTTCCCATTATTCTG+GGG | - | chr3_1:70624747-70624766 | None:intergenic | 40.0% | |
| ATCCACACCAACTTGAGATA+GGG | + | chr3_1:70625109-70625128 | Msa0372290:three_prime_UTR | 40.0% | |
| ATCTGCATTTCATTGCTGCA+TGG | + | chr3_1:70625149-70625168 | Msa0372290:three_prime_UTR | 40.0% | |
| ACCGATCAATCAATCGGGAT+CGG | + | chr3_1:70621616-70621635 | Msa0372290:five_prime_UTR | 45.0% | |
| TCCGATCCCGATTGATTGAT+CGG | - | chr3_1:70621620-70621639 | None:intergenic | 45.0% | |
| !! | TTTTTGGGCATGTAGATGGG+TGG | + | chr3_1:70622063-70622082 | Msa0372290:intron | 45.0% |
| AAGTGATACCTGATGCACCT+TGG | + | chr3_1:70622089-70622108 | Msa0372290:CDS | 45.0% | |
| AGTGATACCTGATGCACCTT+GGG | + | chr3_1:70622090-70622109 | Msa0372290:CDS | 45.0% | |
| TACGTATGTCAGTGTCGTGA+TGG | - | chr3_1:70622251-70622270 | None:intergenic | 45.0% | |
| !! | AAGGAAACTCAACGGACTGA+AGG | + | chr3_1:70623271-70623290 | Msa0372290:CDS | 45.0% |
| GGGTACTCAAGAAAAGACCT+TGG | + | chr3_1:70623367-70623386 | Msa0372290:CDS | 45.0% | |
| CCTTAACATAGCTCACACCA+AGG | - | chr3_1:70623387-70623406 | None:intergenic | 45.0% | |
| ! | CCTTGGTGTGAGCTATGTTA+AGG | + | chr3_1:70623384-70623403 | Msa0372290:CDS | 45.0% |
| AAAAGCGATTGCGCGTGAAT+AGG | + | chr3_1:70623550-70623569 | Msa0372290:CDS | 45.0% | |
| TAGTTCACTGTGCATGCACT+TGG | + | chr3_1:70623673-70623692 | Msa0372290:intron | 45.0% | |
| AGTTCACTGTGCATGCACTT+GGG | + | chr3_1:70623674-70623693 | Msa0372290:intron | 45.0% | |
| TGTAGATCGTGAGAAGGAGT+AGG | + | chr3_1:70624060-70624079 | Msa0372290:intron | 45.0% | |
| TGAGAAGGAGTAGGATGCAT+GGG | + | chr3_1:70624069-70624088 | Msa0372290:intron | 45.0% | |
| TGGTATGCATCGGAATGAGT+GGG | + | chr3_1:70624371-70624390 | Msa0372290:CDS | 45.0% | |
| GGTGGAAAATGCTGATCGTA+TGG | + | chr3_1:70624392-70624411 | Msa0372290:CDS | 45.0% | |
| AATGCTGATCGTATGGTTGC+TGG | + | chr3_1:70624399-70624418 | Msa0372290:CDS | 45.0% | |
| ! | TCTGTTGCTTGTCACTGCAT+GGG | + | chr3_1:70624537-70624556 | Msa0372290:intron | 45.0% |
| ! | GAAGGGACCTTCAATTTTGC+TGG | + | chr3_1:70624898-70624917 | Msa0372290:three_prime_UTR | 45.0% |
| ! | GACCTTCAATTTTGCTGGTG+TGG | + | chr3_1:70624903-70624922 | Msa0372290:three_prime_UTR | 45.0% |
| GACCACACCAGCAAAATTGA+AGG | - | chr3_1:70624908-70624927 | None:intergenic | 45.0% | |
| CATCCACACCAACTTGAGAT+AGG | + | chr3_1:70625108-70625127 | Msa0372290:three_prime_UTR | 45.0% | |
| GCAGATATTCTCACCCTTCA+GGG | - | chr3_1:70625135-70625154 | None:intergenic | 45.0% | |
| TGCAGATATTCTCACCCTTC+AGG | - | chr3_1:70625136-70625155 | None:intergenic | 45.0% | |
| !! | TTTAAAAATAAATAAAAAAG+CGG | + | chr3_1:70621528-70621547 | Msa0372290:five_prime_UTR | 5.0% |
| CTTGTTCAAGAGAACGAGCG+TGG | - | chr3_1:70621741-70621760 | None:intergenic | 50.0% | |
| TCGATGCAGGTTAAGGCAGT+TGG | + | chr3_1:70623241-70623260 | Msa0372290:intron | 50.0% | |
| CCAAGTTACGCAGCACATAC+TGG | - | chr3_1:70623342-70623361 | None:intergenic | 50.0% | |
| CCAGTATGTGCTGCGTAACT+TGG | + | chr3_1:70623339-70623358 | Msa0372290:CDS | 50.0% | |
| TGCTGCGTAACTTGGATCGT+GGG | + | chr3_1:70623347-70623366 | Msa0372290:CDS | 50.0% | |
| GTTCACTGTGCATGCACTTG+GGG | + | chr3_1:70623675-70623694 | Msa0372290:intron | 50.0% | |
| GTGAGAAGGAGTAGGATGCA+TGG | + | chr3_1:70624068-70624087 | Msa0372290:intron | 50.0% | |
| CTGGTATGCATCGGAATGAG+TGG | + | chr3_1:70624370-70624389 | Msa0372290:CDS | 50.0% | |
| TATGCATCGGAATGAGTGGG+TGG | + | chr3_1:70624374-70624393 | Msa0372290:CDS | 50.0% | |
| ! | CTCTGTTGCTTGTCACTGCA+TGG | + | chr3_1:70624536-70624555 | Msa0372290:intron | 50.0% |
| CAGAAACAGAAGTTCAGGGC+AGG | - | chr3_1:70624980-70624999 | None:intergenic | 50.0% | |
| TTCAGGGCCCTATCTCAAGT+TGG | - | chr3_1:70625119-70625138 | None:intergenic | 50.0% | |
| AACTTGAGATAGGGCCCTGA+AGG | + | chr3_1:70625118-70625137 | Msa0372290:three_prime_UTR | 50.0% | |
| ACTTGAGATAGGGCCCTGAA+GGG | + | chr3_1:70625119-70625138 | Msa0372290:three_prime_UTR | 50.0% | |
| TCCATCGGCGTAGACACGAA+CGG | - | chr3_1:70621695-70621714 | None:intergenic | 55.0% | |
| TGTTGGATGCTGCAGCGATG+CGG | + | chr3_1:70621882-70621901 | Msa0372290:CDS | 55.0% | |
| GTGCTGCGTAACTTGGATCG+TGG | + | chr3_1:70623346-70623365 | Msa0372290:CDS | 55.0% | |
| ACTGTGCATGCACTTGGGGA+CGG | + | chr3_1:70623679-70623698 | Msa0372290:intron | 55.0% | |
| !! | GGCCCTATCTCAAGTTGGTG+TGG | - | chr3_1:70625114-70625133 | None:intergenic | 55.0% |
| CATCGGCGTAGACACGAACG+GGG | - | chr3_1:70621693-70621712 | None:intergenic | 60.0% | |
| CCATCGGCGTAGACACGAAC+GGG | - | chr3_1:70621694-70621713 | None:intergenic | 60.0% | |
| CTGTGCATGCACTTGGGGAC+GGG | + | chr3_1:70623680-70623699 | Msa0372290:intron | 60.0% | |
| TGTGCATGCACTTGGGGACG+GGG | + | chr3_1:70623681-70623700 | Msa0372290:intron | 60.0% | |
| CTTCAGGCGGAGGGAGGTGA+GGG | - | chr3_1:70621666-70621685 | None:intergenic | 65.0% | |
| TCTTCAGGCGGAGGGAGGTG+AGG | - | chr3_1:70621667-70621686 | None:intergenic | 65.0% | |
| ACACGAACGGGGCGGTCTTC+AGG | - | chr3_1:70621682-70621701 | None:intergenic | 65.0% | |
| CCCGTTCGTGTCTACGCCGA+TGG | + | chr3_1:70621691-70621710 | Msa0372290:CDS | 65.0% | |
| ATGCACTTGGGGACGGGGCA+AGG | + | chr3_1:70623686-70623705 | Msa0372290:intron | 65.0% | |
| TGCACTTGGGGACGGGGCAA+GGG | + | chr3_1:70623687-70623706 | Msa0372290:intron | 65.0% | |
| CGGAGGGAGGTGAGGGATGG+TGG | - | chr3_1:70621659-70621678 | None:intergenic | 70.0% | |
| AGGCGGAGGGAGGTGAGGGA+TGG | - | chr3_1:70621662-70621681 | None:intergenic | 70.0% | |
| CGAACGGGGCGGTCTTCAGG+CGG | - | chr3_1:70621679-70621698 | None:intergenic | 70.0% | |
| CGGCGTAGACACGAACGGGG+CGG | - | chr3_1:70621690-70621709 | None:intergenic | 70.0% | |
| TGGGGACGGGGCAAGGGAAG+AGG | + | chr3_1:70623693-70623712 | Msa0372290:intron | 70.0% | |
| GGCGGTCTTCAGGCGGAGGG+AGG | - | chr3_1:70621672-70621691 | None:intergenic | 75.0% | |
| CGGGGCGGTCTTCAGGCGGA+GGG | - | chr3_1:70621675-70621694 | None:intergenic | 75.0% | |
| ACGGGGCGGTCTTCAGGCGG+AGG | - | chr3_1:70621676-70621695 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 70621457 | 70625348 | 70621457 | ID=Msa0372290;Name=Msa0372290 |
| chr3_1 | mRNA | 70621457 | 70625348 | 70621457 | ID=Msa0372290-mRNA-1;Parent=Msa0372290;Name=Msa0372290-mRNA-1;_AED=0.08;_eAED=0.08;_QI=186|1|1|1|1|1|8|569|308 |
| chr3_1 | exon | 70621457 | 70621770 | 70621457 | ID=Msa0372290-mRNA-1:exon:15397;Parent=Msa0372290-mRNA-1 |
| chr3_1 | exon | 70621861 | 70621974 | 70621861 | ID=Msa0372290-mRNA-1:exon:15398;Parent=Msa0372290-mRNA-1 |
| chr3_1 | exon | 70622078 | 70622173 | 70622078 | ID=Msa0372290-mRNA-1:exon:15399;Parent=Msa0372290-mRNA-1 |
| chr3_1 | exon | 70623112 | 70623154 | 70623112 | ID=Msa0372290-mRNA-1:exon:15400;Parent=Msa0372290-mRNA-1 |
| chr3_1 | exon | 70623250 | 70623405 | 70623250 | ID=Msa0372290-mRNA-1:exon:15401;Parent=Msa0372290-mRNA-1 |
| chr3_1 | exon | 70623549 | 70623617 | 70623549 | ID=Msa0372290-mRNA-1:exon:15402;Parent=Msa0372290-mRNA-1 |
| chr3_1 | exon | 70624348 | 70624458 | 70624348 | ID=Msa0372290-mRNA-1:exon:15403;Parent=Msa0372290-mRNA-1 |
| chr3_1 | exon | 70624570 | 70625348 | 70624570 | ID=Msa0372290-mRNA-1:exon:15404;Parent=Msa0372290-mRNA-1 |
| chr3_1 | five_prime_UTR | 70621457 | 70621642 | 70621457 | ID=Msa0372290-mRNA-1:five_prime_utr;Parent=Msa0372290-mRNA-1 |
| chr3_1 | CDS | 70621643 | 70621770 | 70621643 | ID=Msa0372290-mRNA-1:cds;Parent=Msa0372290-mRNA-1 |
| chr3_1 | CDS | 70621861 | 70621974 | 70621861 | ID=Msa0372290-mRNA-1:cds;Parent=Msa0372290-mRNA-1 |
| chr3_1 | CDS | 70622078 | 70622173 | 70622078 | ID=Msa0372290-mRNA-1:cds;Parent=Msa0372290-mRNA-1 |
| chr3_1 | CDS | 70623112 | 70623154 | 70623112 | ID=Msa0372290-mRNA-1:cds;Parent=Msa0372290-mRNA-1 |
| chr3_1 | CDS | 70623250 | 70623405 | 70623250 | ID=Msa0372290-mRNA-1:cds;Parent=Msa0372290-mRNA-1 |
| chr3_1 | CDS | 70623549 | 70623617 | 70623549 | ID=Msa0372290-mRNA-1:cds;Parent=Msa0372290-mRNA-1 |
| chr3_1 | CDS | 70624348 | 70624458 | 70624348 | ID=Msa0372290-mRNA-1:cds;Parent=Msa0372290-mRNA-1 |
| chr3_1 | CDS | 70624570 | 70624779 | 70624570 | ID=Msa0372290-mRNA-1:cds;Parent=Msa0372290-mRNA-1 |
| chr3_1 | three_prime_UTR | 70624780 | 70625348 | 70624780 | ID=Msa0372290-mRNA-1:three_prime_utr;Parent=Msa0372290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
