Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420530 | XP_013461161.1 | 99.675 | 308 | 1 | 0 | 1 | 308 | 1 | 308 | 0.0 | 645 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420530 | sp|F4JJE0|CCT2_ARATH | 72.635 | 296 | 66 | 3 | 16 | 307 | 19 | 303 | 9.78e-157 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420530 | A0A072VAH1 | 99.675 | 308 | 1 | 0 | 1 | 308 | 1 | 308 | 0.0 | 645 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0372290 | Msa0420530 | 0.983432 | 1.000237e-157 | -8.615850e-47 |
| Msa0375900 | Msa0420530 | 0.814128 | 1.803704e-51 | -8.615850e-47 |
| Msa0382340 | Msa0420530 | 0.833404 | 5.437904e-56 | -8.615850e-47 |
| Msa0420530 | Msa0444170 | 0.809406 | 1.921963e-50 | -8.615850e-47 |
| Msa0420530 | Msa0466780 | 0.977715 | 2.444452e-144 | -8.615850e-47 |
| Msa0420530 | Msa0476710 | 0.813631 | 2.321710e-51 | -8.615850e-47 |
| Msa0420530 | Msa0491730 | 0.815333 | 9.753342e-52 | -8.615850e-47 |
| Msa0420530 | Msa0521040 | 0.804093 | 2.549073e-49 | -8.615850e-47 |
| Msa0420530 | Msa0771130 | 0.803896 | 2.801295e-49 | -8.615850e-47 |
| Msa0420530 | Msa0849780 | 0.800769 | 1.233754e-48 | -8.615850e-47 |
| Msa0420530 | Msa1002780 | 0.819993 | 8.672246e-53 | -8.615850e-47 |
| Msa0420530 | Msa1238590 | 0.801326 | 9.493632e-49 | -8.615850e-47 |
| Msa0420530 | Msa1319510 | 0.803835 | 2.884374e-49 | -8.615850e-47 |
| Msa0420530 | Msa1407680 | 0.820428 | 6.895767e-53 | -8.615850e-47 |
| Msa0420530 | Msa1449760 | 0.823976 | 1.036437e-53 | -8.615850e-47 |
| Msa0350070 | Msa0420530 | 0.806389 | 8.425000e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420530 | MtrunA17_Chr3g0120311 | 99.675 | 308 | 1 | 0 | 1 | 308 | 1 | 308 | 0.0 | 645 |
| Msa0420530 | MtrunA17_Chr2g0297021 | 83.673 | 245 | 36 | 1 | 15 | 255 | 13 | 257 | 9.53e-157 | 439 |
| Msa0420530 | MtrunA17_Chr4g0032051 | 65.269 | 167 | 50 | 3 | 115 | 277 | 23 | 185 | 9.34e-59 | 187 |
| Msa0420530 | MtrunA17_Chr4g0032041 | 80.822 | 73 | 14 | 0 | 68 | 140 | 1 | 73 | 1.30e-38 | 135 |
| Msa0420530 | MtrunA17_Chr8g0389111 | 42.759 | 145 | 75 | 3 | 18 | 158 | 65 | 205 | 1.33e-27 | 110 |
| Msa0420530 | MtrunA17_Chr8g0389111 | 33.129 | 163 | 102 | 4 | 11 | 171 | 249 | 406 | 4.93e-18 | 84.0 |
| Msa0420530 | MtrunA17_Chr7g0245591 | 40.141 | 142 | 77 | 3 | 16 | 153 | 53 | 190 | 8.63e-27 | 108 |
| Msa0420530 | MtrunA17_Chr7g0245591 | 36.893 | 103 | 59 | 3 | 11 | 111 | 251 | 349 | 2.63e-13 | 70.1 |
| Msa0420530 | MtrunA17_Chr4g0032031 | 72.340 | 47 | 12 | 1 | 15 | 61 | 13 | 58 | 8.41e-19 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420530 | AT2G32260.1 | 75.887 | 282 | 53 | 3 | 12 | 292 | 29 | 296 | 1.09e-157 | 444 |
| Msa0420530 | AT2G32260.2 | 74.000 | 250 | 50 | 3 | 44 | 292 | 12 | 247 | 3.65e-133 | 379 |
| Msa0420530 | AT2G38670.1 | 37.037 | 162 | 91 | 4 | 16 | 173 | 53 | 207 | 7.72e-26 | 106 |
| Msa0420530 | AT2G38670.1 | 32.927 | 164 | 103 | 4 | 11 | 171 | 250 | 409 | 8.72e-17 | 80.9 |
Find 91 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACTAGTGTTTCAATTTA+AGG | 0.078305 | 3_2:-69044824 | Msa0420530:five_prime_UTR |
| TTGTGTCTTTCCCATTATTC+TGG | 0.120099 | 3_2:+69041557 | None:intergenic |
| TAAGGCAGTTGGAAGATTTA+AGG | 0.165025 | 3_2:-69043050 | Msa0420530:CDS |
| CTACAACAAGCAAATTTAAT+AGG | 0.175743 | 3_2:+69041074 | None:intergenic |
| AAAACATAGGCGTACATAAA+TGG | 0.237318 | 3_2:-69041532 | Msa0420530:exon |
| GAGCTTAATCCCCAGAATAA+TGG | 0.309971 | 3_2:-69041568 | Msa0420530:CDS |
| TGCAGATATTCTCACCCTTC+AGG | 0.311214 | 3_2:+69041169 | None:intergenic |
| ACACGAACGGGGCGGTCTTC+AGG | 0.322066 | 3_2:+69044623 | None:intergenic |
| TGTGTCTTTCCCATTATTCT+GGG | 0.326421 | 3_2:+69041558 | None:intergenic |
| CCGAATACGTATCTTCTTGT+TGG | 0.342507 | 3_2:-69044438 | Msa0420530:CDS |
| CAGCATTCTTTGCAACAGTT+TGG | 0.345244 | 3_2:+69041953 | None:intergenic |
| CGGAGGGAGGTGAGGGATGG+TGG | 0.352026 | 3_2:+69044646 | None:intergenic |
| CTAATCAGAAACAGAAGTTC+AGG | 0.367574 | 3_2:+69041321 | None:intergenic |
| TAGGAGACTGAAAACTTTGC+AGG | 0.370109 | 3_2:-69042733 | Msa0420530:CDS |
| TACAACAAGCAAATTTAATA+GGG | 0.374556 | 3_2:+69041075 | None:intergenic |
| AGCTTAATCCCCAGAATAAT+GGG | 0.375260 | 3_2:-69041567 | Msa0420530:CDS |
| CATCCACACCAACTTGAGAT+AGG | 0.376912 | 3_2:-69041194 | Msa0420530:three_prime_UTR |
| CGAATTCAAGAAAGTTTAAG+AGG | 0.377769 | 3_2:-69041715 | Msa0420530:CDS |
| TAAATTAGCTCACCATCTTA+TGG | 0.378937 | 3_2:+69041854 | None:intergenic |
| AAGACATAATGCTGAAAATT+CGG | 0.381602 | 3_2:+69041376 | None:intergenic |
| CCAGTATGTGCTGCGTAACT+TGG | 0.384421 | 3_2:-69042963 | Msa0420530:CDS |
| AATGGGAATGAAATATTTGA+TGG | 0.404313 | 3_2:-69041019 | Msa0420530:three_prime_UTR |
| TTCTTGAATTCGATCACATA+TGG | 0.409337 | 3_2:+69041726 | None:intergenic |
| AAAAGCGATTGCGCGTGAAT+AGG | 0.423820 | 3_2:-69042752 | Msa0420530:CDS |
| ATGTTCAGATTACTAGTAAT+GGG | 0.426716 | 3_2:-69041036 | Msa0420530:three_prime_UTR |
| AATGCTGATCGTATGGTTGC+TGG | 0.428726 | 3_2:-69041904 | Msa0420530:CDS |
| CCATCGGCGTAGACACGAAC+GGG | 0.432123 | 3_2:+69044611 | None:intergenic |
| TATGTTCAGATTACTAGTAA+TGG | 0.442651 | 3_2:-69041037 | Msa0420530:three_prime_UTR |
| TTTCTAGAAATGTTTGAAGA+AGG | 0.447857 | 3_2:-69041880 | Msa0420530:CDS |
| GGCGGTCTTCAGGCGGAGGG+AGG | 0.449702 | 3_2:+69044633 | None:intergenic |
| GCAGATATTCTCACCCTTCA+GGG | 0.454665 | 3_2:+69041170 | None:intergenic |
| TCCGATCCCGATTGATTGAT+CGG | 0.464162 | 3_2:+69044685 | None:intergenic |
| CCAACAAGAAGATACGTATT+CGG | 0.465493 | 3_2:+69044438 | None:intergenic |
| CCAAGTTACGCAGCACATAC+TGG | 0.466391 | 3_2:+69042963 | None:intergenic |
| ACGGGGCGGTCTTCAGGCGG+AGG | 0.467160 | 3_2:+69044629 | None:intergenic |
| TTAATAACCCAAGGTGCATC+AGG | 0.470523 | 3_2:+69044206 | None:intergenic |
| TCTTCAGGCGGAGGGAGGTG+AGG | 0.478400 | 3_2:+69044638 | None:intergenic |
| TTTAAGGCAAGGAAAATAAA+CGG | 0.487971 | 3_2:-69044808 | Msa0420530:five_prime_UTR |
| CCCGTTCGTGTCTACGCCGA+TGG | 0.493933 | 3_2:-69044611 | Msa0420530:CDS |
| CTTCAGGCGGAGGGAGGTGA+GGG | 0.499646 | 3_2:+69044639 | None:intergenic |
| TCGATGCAGGTTAAGGCAGT+TGG | 0.503231 | 3_2:-69043061 | Msa0420530:intron |
| AGTAAGAGAACAGCAAGAAA+AGG | 0.505554 | 3_2:-69042706 | Msa0420530:intron |
| TAGTGTTTCAATTTAAGGCA+AGG | 0.522430 | 3_2:-69044819 | Msa0420530:five_prime_UTR |
| AACTTGAGATAGGGCCCTGA+AGG | 0.523113 | 3_2:-69041184 | Msa0420530:three_prime_UTR |
| CAAACTGTTGCAAAGAATGC+TGG | 0.524421 | 3_2:-69041952 | Msa0420530:CDS |
| AGTGATACCTGATGCACCTT+GGG | 0.526304 | 3_2:-69044213 | Msa0420530:CDS |
| ATCTACGATCTCTTTCACTT+CGG | 0.528928 | 3_2:-69044587 | Msa0420530:CDS |
| TGAAGAAGGTTGCCATAAGA+TGG | 0.533046 | 3_2:-69041866 | Msa0420530:intron |
| AGGCGGAGGGAGGTGAGGGA+TGG | 0.533317 | 3_2:+69044643 | None:intergenic |
| ACATGTTTCAATGTTGCAGA+AGG | 0.535526 | 3_2:-69041423 | Msa0420530:three_prime_UTR |
| GGCCCTATCTCAAGTTGGTG+TGG | 0.535808 | 3_2:+69041191 | None:intergenic |
| TAATCAGAAACAGAAGTTCA+GGG | 0.552670 | 3_2:+69041322 | None:intergenic |
| GCGGTGACACATAAGTATAA+AGG | 0.555192 | 3_2:-69044402 | Msa0420530:CDS |
| GTGTCTTTCCCATTATTCTG+GGG | 0.556779 | 3_2:+69041559 | None:intergenic |
| GACCACACCAGCAAAATTGA+AGG | 0.558429 | 3_2:+69041398 | None:intergenic |
| ATCCACACCAACTTGAGATA+GGG | 0.562958 | 3_2:-69041193 | Msa0420530:three_prime_UTR |
| CCTTGGTGTGAGCTATGTTA+AGG | 0.570180 | 3_2:-69042918 | Msa0420530:intron |
| CGGGGCGGTCTTCAGGCGGA+GGG | 0.571575 | 3_2:+69044630 | None:intergenic |
| AAGGAAACTCAACGGACTGA+AGG | 0.571851 | 3_2:-69043031 | Msa0420530:CDS |
| ACATAAGTATAAAGGCAAAA+CGG | 0.573897 | 3_2:-69044394 | Msa0420530:CDS |
| ACCGATCAATCAATCGGGAT+CGG | 0.575733 | 3_2:-69044686 | Msa0420530:five_prime_UTR |
| CAGAAACAGAAGTTCAGGGC+AGG | 0.577238 | 3_2:+69041326 | None:intergenic |
| TTCAGGGCCCTATCTCAAGT+TGG | 0.580744 | 3_2:+69041186 | None:intergenic |
| ATGGGAATGAAATATTTGAT+GGG | 0.581098 | 3_2:-69041018 | Msa0420530:three_prime_UTR |
| CATGTTTCAATGTTGCAGAA+GGG | 0.585696 | 3_2:-69041422 | Msa0420530:three_prime_UTR |
| AACTCTTGATTAATAACCCA+AGG | 0.585926 | 3_2:+69044197 | None:intergenic |
| TGCTGCGTAACTTGGATCGT+GGG | 0.587350 | 3_2:-69042955 | Msa0420530:CDS |
| CAAAGAATGCTGGTATGCAT+CGG | 0.589636 | 3_2:-69041942 | Msa0420530:CDS |
| GTGCTGCGTAACTTGGATCG+TGG | 0.590786 | 3_2:-69042956 | Msa0420530:CDS |
| CGAACGGGGCGGTCTTCAGG+CGG | 0.603007 | 3_2:+69044626 | None:intergenic |
| CTACATCAGATATAATAATG+AGG | 0.605020 | 3_2:-69043003 | Msa0420530:CDS |
| GAAAGACACAAACAAAACAT+AGG | 0.607776 | 3_2:-69041545 | Msa0420530:exon |
| CTGGTATGCATCGGAATGAG+TGG | 0.622437 | 3_2:-69041933 | Msa0420530:CDS |
| TCCATCGGCGTAGACACGAA+CGG | 0.624413 | 3_2:+69044610 | None:intergenic |
| CTTGTTCAAGAGAACGAGCG+TGG | 0.627702 | 3_2:+69044564 | None:intergenic |
| GGTGGAAAATGCTGATCGTA+TGG | 0.628102 | 3_2:-69041911 | Msa0420530:CDS |
| AGAGTATTATGATGATCATG+AGG | 0.628279 | 3_2:-69041635 | Msa0420530:CDS |
| ACTTGAGATAGGGCCCTGAA+GGG | 0.630602 | 3_2:-69041183 | Msa0420530:three_prime_UTR |
| AAGTGATACCTGATGCACCT+TGG | 0.631700 | 3_2:-69044214 | Msa0420530:CDS |
| AAAGAGATCGTAGATTCCAT+CGG | 0.647768 | 3_2:+69044595 | None:intergenic |
| GAAGATTTAAGGAAACTCAA+CGG | 0.652437 | 3_2:-69043039 | Msa0420530:CDS |
| GTATTATGATGATCATGAGG+AGG | 0.659585 | 3_2:-69041632 | Msa0420530:CDS |
| GACAGATATGCTGATACAAG+TGG | 0.674347 | 3_2:-69043195 | Msa0420530:intron |
| TCAAAATGGTAAGGATGACG+AGG | 0.681849 | 3_2:-69041662 | Msa0420530:CDS |
| GGGTACTCAAGAAAAGACCT+TGG | 0.686439 | 3_2:-69042935 | Msa0420530:CDS |
| TGGTATGCATCGGAATGAGT+GGG | 0.694195 | 3_2:-69041932 | Msa0420530:CDS |
| TGTTGGATGCTGCAGCGATG+CGG | 0.696674 | 3_2:-69044421 | Msa0420530:CDS |
| CGGCGTAGACACGAACGGGG+CGG | 0.716260 | 3_2:+69044615 | None:intergenic |
| CATCGGCGTAGACACGAACG+GGG | 0.729172 | 3_2:+69044612 | None:intergenic |
| CCTTAACATAGCTCACACCA+AGG | 0.731539 | 3_2:+69042918 | None:intergenic |
| TATGCATCGGAATGAGTGGG+TGG | 0.732959 | 3_2:-69041929 | Msa0420530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAATCACTTTTTTTTTA+TGG | - | chr3_2:69041345-69041364 | Msa0420530:three_prime_UTR | 10.0% |
| !!! | TTGATGTATATATTTTTTTT+TGG | - | chr3_2:69041562-69041581 | Msa0420530:CDS | 10.0% |
| !!! | TGATGTATATATTTTTTTTT+GGG | - | chr3_2:69041563-69041582 | Msa0420530:CDS | 10.0% |
| !! | TGAAATTTAAAAGAAAATTA+AGG | + | chr3_2:69042705-69042724 | None:intergenic | 10.0% |
| !!! | AATTTTCTTTTAAATTTCAT+TGG | - | chr3_2:69042706-69042725 | Msa0420530:intron | 10.0% |
| !!! | ATTTTCTTTTAAATTTCATT+GGG | - | chr3_2:69042707-69042726 | Msa0420530:CDS | 10.0% |
| !! | TAAAATAATCGATTAATTGA+GGG | + | chr3_2:69041326-69041345 | None:intergenic | 15.0% |
| !! | ATAAAATAATCGATTAATTG+AGG | + | chr3_2:69041327-69041346 | None:intergenic | 15.0% |
| !! | CTTATATTAATGAATTGAAT+TGG | + | chr3_2:69041892-69041911 | None:intergenic | 15.0% |
| !! | TAAAAGTTCTATTTGAAAAT+TGG | - | chr3_2:69041969-69041988 | Msa0420530:intron | 15.0% |
| !! | ATTTGATGTTAGTATAAAAT+TGG | - | chr3_2:69042283-69042302 | Msa0420530:intron | 15.0% |
| !! | ATGTAAAATCTATGATTTAA+AGG | + | chr3_2:69042329-69042348 | None:intergenic | 15.0% |
| !!! | ATTAATACAATTTTTTCGTT+CGG | + | chr3_2:69042365-69042384 | None:intergenic | 15.0% |
| !!! | AAAATATATTGAACATTTTG+AGG | + | chr3_2:69044595-69044614 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTGTTAATGTAAT+TGG | - | chr3_2:69041533-69041552 | Msa0420530:exon | 20.0% |
| !! | TACTTATAAACTATAAAGCA+CGG | + | chr3_2:69041847-69041866 | None:intergenic | 20.0% |
| !! | AATGAATTGAATTGGAATAA+AGG | + | chr3_2:69041884-69041903 | None:intergenic | 20.0% |
| !!! | AGGTGTATTTTAGTAAATTT+TGG | - | chr3_2:69042021-69042040 | Msa0420530:intron | 20.0% |
| !!! | GCTGTATTTTTTAGTTTAAA+GGG | - | chr3_2:69042133-69042152 | Msa0420530:intron | 20.0% |
| !! | ATTTAAAGGAAATACATTGT+TGG | + | chr3_2:69042315-69042334 | None:intergenic | 20.0% |
| !! | AAATACAAATGTAAGTTTGA+CGG | + | chr3_2:69043393-69043412 | None:intergenic | 20.0% |
| !! | AAAGTAGATTATCAAAACTT+AGG | - | chr3_2:69043711-69043730 | Msa0420530:intron | 20.0% |
| !!! | AGAAAAATTGATTCATCATT+TGG | + | chr3_2:69044136-69044155 | None:intergenic | 20.0% |
| !!! | GAATCAATTTTTCTTCAAAA+TGG | - | chr3_2:69044142-69044161 | Msa0420530:intron | 20.0% |
| !!! | AATTTTTCTTCAAAATGGTA+AGG | - | chr3_2:69044147-69044166 | Msa0420530:intron | 20.0% |
| !! | TACAACAAGCAAATTTAATA+GGG | + | chr3_2:69044746-69044765 | None:intergenic | 20.0% |
| !! | TTTAAGGCAAGGAAAATAAA+CGG | - | chr3_2:69041010-69041029 | Msa0420530:three_prime_UTR | 25.0% |
| !!! | TAATGGAGATTACGATTTTT+TGG | + | chr3_2:69041280-69041299 | None:intergenic | 25.0% |
| ! | ACATAAGTATAAAGGCAAAA+CGG | - | chr3_2:69041424-69041443 | Msa0420530:three_prime_UTR | 25.0% |
| ! | TATACAAAAACGAAACGAAA+TGG | + | chr3_2:69041700-69041719 | None:intergenic | 25.0% |
| ! | TTAATATAAGTACCTTTGTC+CGG | - | chr3_2:69041902-69041921 | Msa0420530:CDS | 25.0% |
| ! | GCTTTAATATGAGTTATTCA+TGG | - | chr3_2:69041925-69041944 | Msa0420530:CDS | 25.0% |
| !! | AATTGTTGTTATACCATACA+TGG | + | chr3_2:69042094-69042113 | None:intergenic | 25.0% |
| ! | TGGTATAACAACAATTGAAA+TGG | - | chr3_2:69042098-69042117 | Msa0420530:intron | 25.0% |
| ! | ATTGAAATGGATATCTTCTT+AGG | - | chr3_2:69042111-69042130 | Msa0420530:intron | 25.0% |
| !!! | GGCTGTATTTTTTAGTTTAA+AGG | - | chr3_2:69042132-69042151 | Msa0420530:intron | 25.0% |
| !! | ACCCATGATTTCTATTTTAT+TGG | - | chr3_2:69042537-69042556 | Msa0420530:intron | 25.0% |
| ! | GCCAATAAAATAGAAATCAT+GGG | + | chr3_2:69042541-69042560 | None:intergenic | 25.0% |
| ! | TGCCAATAAAATAGAAATCA+TGG | + | chr3_2:69042542-69042561 | None:intergenic | 25.0% |
| ! | CTACATCAGATATAATAATG+AGG | - | chr3_2:69042815-69042834 | Msa0420530:intron | 25.0% |
| ! | CAAATGGTAGACAATATTAA+GGG | + | chr3_2:69043001-69043020 | None:intergenic | 25.0% |
| ! | TCAAATGGTAGACAATATTA+AGG | + | chr3_2:69043002-69043021 | None:intergenic | 25.0% |
| ! | TTAATATTGTCTACCATTTG+AGG | - | chr3_2:69043001-69043020 | Msa0420530:CDS | 25.0% |
| !! | GTTCATTTTAAATACCAACA+CGG | + | chr3_2:69043043-69043062 | None:intergenic | 25.0% |
| !! | TGTTGGTATTTAAAATGAAC+AGG | - | chr3_2:69043043-69043062 | Msa0420530:CDS | 25.0% |
| ! | TACAACTTAGTCAAATGATA+TGG | + | chr3_2:69043169-69043188 | None:intergenic | 25.0% |
| ! | TTCCCTATTTATTACTTTGA+TGG | - | chr3_2:69043316-69043335 | Msa0420530:intron | 25.0% |
| ! | CTCCATCAAAGTAATAAATA+GGG | + | chr3_2:69043321-69043340 | None:intergenic | 25.0% |
| ! | TTTCTTGCAATGTTTGTTTA+AGG | - | chr3_2:69043412-69043431 | Msa0420530:intron | 25.0% |
| ! | TCTATATTCATTGGGTATTT+GGG | + | chr3_2:69043532-69043551 | None:intergenic | 25.0% |
| ! | TTCTATATTCATTGGGTATT+TGG | + | chr3_2:69043533-69043552 | None:intergenic | 25.0% |
| ! | AAAATTATGGCTACCTTATA+TGG | + | chr3_2:69043616-69043635 | None:intergenic | 25.0% |
| !!! | GCCATAATTTTAACTTTGTT+TGG | - | chr3_2:69043625-69043644 | Msa0420530:intron | 25.0% |
| ! | GCCAAACAAAGTTAAAATTA+TGG | + | chr3_2:69043629-69043648 | None:intergenic | 25.0% |
| ! | ATATATGAAGGCAATGTTTA+AGG | - | chr3_2:69043652-69043671 | Msa0420530:intron | 25.0% |
| ! | TATATGAAGGCAATGTTTAA+GGG | - | chr3_2:69043653-69043672 | Msa0420530:intron | 25.0% |
| !! | TTTCTAGAAATGTTTGAAGA+AGG | - | chr3_2:69043938-69043957 | Msa0420530:intron | 25.0% |
| ! | GGAAAAAGTTTAAAAGCTAT+AGG | + | chr3_2:69044032-69044051 | None:intergenic | 25.0% |
| ! | AAGACATAATGCTGAAAATT+CGG | + | chr3_2:69044445-69044464 | None:intergenic | 25.0% |
| !! | ATTTTTGCCATGTTAAATGT+AGG | - | chr3_2:69044687-69044706 | Msa0420530:five_prime_UTR | 25.0% |
| !! | TTTTCTACCTACATTTAACA+TGG | + | chr3_2:69044697-69044716 | None:intergenic | 25.0% |
| !! | AGGTAGAAAATTTTGTTCAA+AGG | - | chr3_2:69044707-69044726 | Msa0420530:five_prime_UTR | 25.0% |
| !! | GGTAGAAAATTTTGTTCAAA+GGG | - | chr3_2:69044708-69044727 | Msa0420530:five_prime_UTR | 25.0% |
| ! | CTACAACAAGCAAATTTAAT+AGG | + | chr3_2:69044747-69044766 | None:intergenic | 25.0% |
| ! | TATGTTCAGATTACTAGTAA+TGG | - | chr3_2:69044781-69044800 | Msa0420530:five_prime_UTR | 25.0% |
| ! | ATGTTCAGATTACTAGTAAT+GGG | - | chr3_2:69044782-69044801 | Msa0420530:five_prime_UTR | 25.0% |
| ! | AATGGGAATGAAATATTTGA+TGG | - | chr3_2:69044799-69044818 | Msa0420530:five_prime_UTR | 25.0% |
| ! | ATGGGAATGAAATATTTGAT+GGG | - | chr3_2:69044800-69044819 | Msa0420530:five_prime_UTR | 25.0% |
| GCAACTAGTGTTTCAATTTA+AGG | - | chr3_2:69040994-69041013 | Msa0420530:three_prime_UTR | 30.0% | |
| ! | TAGTGTTTCAATTTAAGGCA+AGG | - | chr3_2:69040999-69041018 | Msa0420530:three_prime_UTR | 30.0% |
| !! | TTGATTGATCGGTTTTTGTT+CGG | + | chr3_2:69041125-69041144 | None:intergenic | 30.0% |
| ACAAAAACCGATCAATCAAT+CGG | - | chr3_2:69041126-69041145 | Msa0420530:three_prime_UTR | 30.0% | |
| AAGTAGAGAATGAAGAGTAA+TGG | + | chr3_2:69041297-69041316 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTGGGCATGTAGA+TGG | - | chr3_2:69041574-69041593 | Msa0420530:CDS | 30.0% |
| !!! | TTTTTTTTGGGCATGTAGAT+GGG | - | chr3_2:69041575-69041594 | Msa0420530:CDS | 30.0% |
| AACTCTTGATTAATAACCCA+AGG | + | chr3_2:69041624-69041643 | None:intergenic | 30.0% | |
| ! | GAATGATGTCATTTGCTTAA+AGG | - | chr3_2:69041794-69041813 | Msa0420530:intron | 30.0% |
| TAATATAAGTACCTTTGTCC+GGG | - | chr3_2:69041903-69041922 | Msa0420530:CDS | 30.0% | |
| GAATAACTCATATTAAAGCC+CGG | + | chr3_2:69041924-69041943 | None:intergenic | 30.0% | |
| !! | AGGATAAGTTGAAAAGCATT+CGG | + | chr3_2:69042070-69042089 | None:intergenic | 30.0% |
| TTAAAACTGATGATTTGACG+TGG | + | chr3_2:69042225-69042244 | None:intergenic | 30.0% | |
| TAAAATGTAGTTACACGAGT+CGG | - | chr3_2:69042242-69042261 | Msa0420530:intron | 30.0% | |
| TCCTGCTTATTTAATGTCTA+TGG | - | chr3_2:69042399-69042418 | Msa0420530:intron | 30.0% | |
| TCCATAGACATTAAATAAGC+AGG | + | chr3_2:69042403-69042422 | None:intergenic | 30.0% | |
| TACCTAAGAACTAAGAGTTA+GGG | + | chr3_2:69042503-69042522 | None:intergenic | 30.0% | |
| ACATTTCATTGCAAAAACCA+AGG | + | chr3_2:69042602-69042621 | None:intergenic | 30.0% | |
| GAAGATTTAAGGAAACTCAA+CGG | - | chr3_2:69042779-69042798 | Msa0420530:intron | 30.0% | |
| GCTCCATCAAAGTAATAAAT+AGG | + | chr3_2:69043322-69043341 | None:intergenic | 30.0% | |
| ! | CACAAAATTTTACAGCTCAT+GGG | + | chr3_2:69043483-69043502 | None:intergenic | 30.0% |
| ! | CATGAGCTGTAAAATTTTGT+GGG | - | chr3_2:69043482-69043501 | Msa0420530:intron | 30.0% |
| ! | ATGAGCTGTAAAATTTTGTG+GGG | - | chr3_2:69043483-69043502 | Msa0420530:intron | 30.0% |
| ATACCCAATGAATATAGAAG+TGG | - | chr3_2:69043534-69043553 | Msa0420530:intron | 30.0% | |
| TCTCCACTTCTATATTCATT+GGG | + | chr3_2:69043540-69043559 | None:intergenic | 30.0% | |
| TTGTTTGGCAGTATATATGA+AGG | - | chr3_2:69043640-69043659 | Msa0420530:intron | 30.0% | |
| TCACTCGCAACTATAATTTA+TGG | - | chr3_2:69043767-69043786 | Msa0420530:intron | 30.0% | |
| !!! | GCAGGTAATTTTAAAATGCA+TGG | + | chr3_2:69043795-69043814 | None:intergenic | 30.0% |
| !!! | CATTTTAAAATTACCTGCAG+TGG | - | chr3_2:69043797-69043816 | Msa0420530:intron | 30.0% |
| TAAATTAGCTCACCATCTTA+TGG | + | chr3_2:69043967-69043986 | None:intergenic | 30.0% | |
| TTCTTGAATTCGATCACATA+TGG | + | chr3_2:69044095-69044114 | None:intergenic | 30.0% | |
| CGAATTCAAGAAAGTTTAAG+AGG | - | chr3_2:69044103-69044122 | Msa0420530:intron | 30.0% | |
| ! | AGAGTATTATGATGATCATG+AGG | - | chr3_2:69044183-69044202 | Msa0420530:CDS | 30.0% |
| GAAAGACACAAACAAAACAT+AGG | - | chr3_2:69044273-69044292 | Msa0420530:intron | 30.0% | |
| AAAACATAGGCGTACATAAA+TGG | - | chr3_2:69044286-69044305 | Msa0420530:intron | 30.0% | |
| TAATCAGAAACAGAAGTTCA+GGG | + | chr3_2:69044499-69044518 | None:intergenic | 30.0% | |
| ATAAAAAAGCGGAAACAACG+CGG | - | chr3_2:69041055-69041074 | Msa0420530:three_prime_UTR | 35.0% | |
| CAAAAACCGATCAATCAATC+GGG | - | chr3_2:69041127-69041146 | Msa0420530:three_prime_UTR | 35.0% | |
| AAAGAGATCGTAGATTCCAT+CGG | + | chr3_2:69041226-69041245 | None:intergenic | 35.0% | |
| ATCTACGATCTCTTTCACTT+CGG | - | chr3_2:69041231-69041250 | Msa0420530:three_prime_UTR | 35.0% | |
| CCAACAAGAAGATACGTATT+CGG | + | chr3_2:69041383-69041402 | None:intergenic | 35.0% | |
| CGAAACGAAATGGAATCTTA+CGG | + | chr3_2:69041690-69041709 | None:intergenic | 35.0% | |
| TGTAAAACTAAGTTGCACTG+TGG | + | chr3_2:69042173-69042192 | None:intergenic | 35.0% | |
| AGAACACTCTCATTAGATGT+CGG | + | chr3_2:69042196-69042215 | None:intergenic | 35.0% | |
| AAAATGTAGTTACACGAGTC+GGG | - | chr3_2:69042243-69042262 | Msa0420530:intron | 35.0% | |
| GTACCTAAGAACTAAGAGTT+AGG | + | chr3_2:69042504-69042523 | None:intergenic | 35.0% | |
| TATGATTTCGATGCAGGTTA+AGG | - | chr3_2:69042750-69042769 | Msa0420530:CDS | 35.0% | |
| TAAGGCAGTTGGAAGATTTA+AGG | - | chr3_2:69042768-69042787 | Msa0420530:intron | 35.0% | |
| ! | GCTATGTTAAGGTGTGATTT+TGG | - | chr3_2:69042911-69042930 | Msa0420530:intron | 35.0% |
| ATATTGTCTACCATTTGAGG+AGG | - | chr3_2:69043004-69043023 | Msa0420530:CDS | 35.0% | |
| AGTAAGAGAACAGCAAGAAA+AGG | - | chr3_2:69043112-69043131 | Msa0420530:intron | 35.0% | |
| !! | CAAGAAAAGGTTGGTGTAAA+AGG | - | chr3_2:69043125-69043144 | Msa0420530:intron | 35.0% |
| !! | TAGAATAGTAGTTCTAGCTG+TGG | - | chr3_2:69043253-69043272 | Msa0420530:intron | 35.0% |
| CTTCCACAAGTTCAACTATT+AGG | - | chr3_2:69043349-69043368 | Msa0420530:intron | 35.0% | |
| GAACCTAATAGTTGAACTTG+TGG | + | chr3_2:69043355-69043374 | None:intergenic | 35.0% | |
| ! | CCACAAAATTTTACAGCTCA+TGG | + | chr3_2:69043484-69043503 | None:intergenic | 35.0% |
| ! | CCATGAGCTGTAAAATTTTG+TGG | - | chr3_2:69043481-69043500 | Msa0420530:intron | 35.0% |
| TTGTGGGGTAAATAAAAGAG+TGG | - | chr3_2:69043498-69043517 | Msa0420530:intron | 35.0% | |
| TGTGGGGTAAATAAAAGAGT+GGG | - | chr3_2:69043499-69043518 | Msa0420530:intron | 35.0% | |
| GTCTCCACTTCTATATTCAT+TGG | + | chr3_2:69043541-69043560 | None:intergenic | 35.0% | |
| TTTGCTAAATGTAGATCGTG+AGG | - | chr3_2:69043567-69043586 | Msa0420530:intron | 35.0% | |
| ACCTCAAATATTTGTGCAGT+AGG | - | chr3_2:69043734-69043753 | Msa0420530:intron | 35.0% | |
| TAAAATTACCTGCAGTGGAT+TGG | - | chr3_2:69043802-69043821 | Msa0420530:intron | 35.0% | |
| GTATTATGATGATCATGAGG+AGG | - | chr3_2:69044186-69044205 | Msa0420530:CDS | 35.0% | |
| AGCTTAATCCCCAGAATAAT+GGG | - | chr3_2:69044251-69044270 | Msa0420530:intron | 35.0% | |
| TGTGTCTTTCCCATTATTCT+GGG | + | chr3_2:69044263-69044282 | None:intergenic | 35.0% | |
| TTGTGTCTTTCCCATTATTC+TGG | + | chr3_2:69044264-69044283 | None:intergenic | 35.0% | |
| ACATGTTTCAATGTTGCAGA+AGG | - | chr3_2:69044395-69044414 | Msa0420530:CDS | 35.0% | |
| CATGTTTCAATGTTGCAGAA+GGG | - | chr3_2:69044396-69044415 | Msa0420530:CDS | 35.0% | |
| CTAATCAGAAACAGAAGTTC+AGG | + | chr3_2:69044500-69044519 | None:intergenic | 35.0% | |
| CCGAATACGTATCTTCTTGT+TGG | - | chr3_2:69041380-69041399 | Msa0420530:three_prime_UTR | 40.0% | |
| GCGGTGACACATAAGTATAA+AGG | - | chr3_2:69041416-69041435 | Msa0420530:three_prime_UTR | 40.0% | |
| TTAATAACCCAAGGTGCATC+AGG | + | chr3_2:69041615-69041634 | None:intergenic | 40.0% | |
| TCATATTAAAGCCCGGACAA+AGG | + | chr3_2:69041917-69041936 | None:intergenic | 40.0% | |
| TTGACGTAAACGAGTGTGTT+AGG | - | chr3_2:69042001-69042020 | Msa0420530:intron | 40.0% | |
| TCAACTTATCCTGCCATGTA+TGG | - | chr3_2:69042078-69042097 | Msa0420530:intron | 40.0% | |
| GTTGTTATACCATACATGGC+AGG | + | chr3_2:69042090-69042109 | None:intergenic | 40.0% | |
| TAGGGAGTTGCAACAAGAAA+TGG | + | chr3_2:69042485-69042504 | None:intergenic | 40.0% | |
| ! | CTCCCTAACTCTTAGTTCTT+AGG | - | chr3_2:69042498-69042517 | Msa0420530:intron | 40.0% |
| GCATTATGTAGCTAATGCCT+TGG | - | chr3_2:69042582-69042601 | Msa0420530:intron | 40.0% | |
| GACAGATATGCTGATACAAG+TGG | - | chr3_2:69042623-69042642 | Msa0420530:intron | 40.0% | |
| GTGTTGTATGATTTCGATGC+AGG | - | chr3_2:69042744-69042763 | Msa0420530:CDS | 40.0% | |
| AACATAAGCTCCTCCTCAAA+TGG | + | chr3_2:69043017-69043036 | None:intergenic | 40.0% | |
| ! | GAGCTTATGTTTTTCCGTGT+TGG | - | chr3_2:69043026-69043045 | Msa0420530:CDS | 40.0% |
| TAGGAGACTGAAAACTTTGC+AGG | - | chr3_2:69043085-69043104 | Msa0420530:intron | 40.0% | |
| AGAGAACAGCAAGAAAAGGT+TGG | - | chr3_2:69043116-69043135 | Msa0420530:intron | 40.0% | |
| TCATGGGATGCGAACAAAAA+AGG | + | chr3_2:69043467-69043486 | None:intergenic | 40.0% | |
| TGCATGGGTACTACCATATA+AGG | - | chr3_2:69043600-69043619 | Msa0420530:intron | 40.0% | |
| GCCTACTGCACAAATATTTG+AGG | + | chr3_2:69043738-69043757 | None:intergenic | 40.0% | |
| TCAAAATTCCAATCCACTGC+AGG | + | chr3_2:69043813-69043832 | None:intergenic | 40.0% | |
| CAGCATTCTTTGCAACAGTT+TGG | + | chr3_2:69043868-69043887 | None:intergenic | 40.0% | |
| CAAACTGTTGCAAAGAATGC+TGG | - | chr3_2:69043866-69043885 | Msa0420530:intron | 40.0% | |
| CAAAGAATGCTGGTATGCAT+CGG | - | chr3_2:69043876-69043895 | Msa0420530:intron | 40.0% | |
| TGAAGAAGGTTGCCATAAGA+TGG | - | chr3_2:69043952-69043971 | Msa0420530:intron | 40.0% | |
| TCACTGCATGGGTATATTTC+AGG | - | chr3_2:69044063-69044082 | Msa0420530:intron | 40.0% | |
| CACTGCATGGGTATATTTCA+GGG | - | chr3_2:69044064-69044083 | Msa0420530:intron | 40.0% | |
| ACTGCATGGGTATATTTCAG+GGG | - | chr3_2:69044065-69044084 | Msa0420530:intron | 40.0% | |
| TCAAAATGGTAAGGATGACG+AGG | - | chr3_2:69044156-69044175 | Msa0420530:CDS | 40.0% | |
| GAGCTTAATCCCCAGAATAA+TGG | - | chr3_2:69044250-69044269 | Msa0420530:intron | 40.0% | |
| GTGTCTTTCCCATTATTCTG+GGG | + | chr3_2:69044262-69044281 | None:intergenic | 40.0% | |
| ATCCACACCAACTTGAGATA+GGG | - | chr3_2:69044625-69044644 | Msa0420530:CDS | 40.0% | |
| ACCGATCAATCAATCGGGAT+CGG | - | chr3_2:69041132-69041151 | Msa0420530:three_prime_UTR | 45.0% | |
| TCCGATCCCGATTGATTGAT+CGG | + | chr3_2:69041136-69041155 | None:intergenic | 45.0% | |
| !! | TTTTTGGGCATGTAGATGGG+TGG | - | chr3_2:69041578-69041597 | Msa0420530:CDS | 45.0% |
| AAGTGATACCTGATGCACCT+TGG | - | chr3_2:69041604-69041623 | Msa0420530:CDS | 45.0% | |
| AGTGATACCTGATGCACCTT+GGG | - | chr3_2:69041605-69041624 | Msa0420530:CDS | 45.0% | |
| TACGTATGTCAGTGTCGTGA+TGG | + | chr3_2:69041766-69041785 | None:intergenic | 45.0% | |
| !! | AAGGAAACTCAACGGACTGA+AGG | - | chr3_2:69042787-69042806 | Msa0420530:intron | 45.0% |
| GGGTACTCAAGAAAAGACCT+TGG | - | chr3_2:69042883-69042902 | Msa0420530:intron | 45.0% | |
| CCTTAACATAGCTCACACCA+AGG | + | chr3_2:69042903-69042922 | None:intergenic | 45.0% | |
| ! | CCTTGGTGTGAGCTATGTTA+AGG | - | chr3_2:69042900-69042919 | Msa0420530:intron | 45.0% |
| AAAAGCGATTGCGCGTGAAT+AGG | - | chr3_2:69043066-69043085 | Msa0420530:intron | 45.0% | |
| TAGTTCACTGTGCATGCACT+TGG | - | chr3_2:69043189-69043208 | Msa0420530:CDS | 45.0% | |
| AGTTCACTGTGCATGCACTT+GGG | - | chr3_2:69043190-69043209 | Msa0420530:CDS | 45.0% | |
| GCTAAATGTAGATCGTGAGG+AGG | - | chr3_2:69043570-69043589 | Msa0420530:intron | 45.0% | |
| TGGTATGCATCGGAATGAGT+GGG | - | chr3_2:69043886-69043905 | Msa0420530:intron | 45.0% | |
| GGTGGAAAATGCTGATCGTA+TGG | - | chr3_2:69043907-69043926 | Msa0420530:intron | 45.0% | |
| AATGCTGATCGTATGGTTGC+TGG | - | chr3_2:69043914-69043933 | Msa0420530:intron | 45.0% | |
| ! | TCTGTTGCTTGTCACTGCAT+GGG | - | chr3_2:69044052-69044071 | Msa0420530:intron | 45.0% |
| ! | GAAGGGACCTTCAATTTTGC+TGG | - | chr3_2:69044413-69044432 | Msa0420530:CDS | 45.0% |
| ! | GACCTTCAATTTTGCTGGTG+TGG | - | chr3_2:69044418-69044437 | Msa0420530:CDS | 45.0% |
| GACCACACCAGCAAAATTGA+AGG | + | chr3_2:69044423-69044442 | None:intergenic | 45.0% | |
| CATCCACACCAACTTGAGAT+AGG | - | chr3_2:69044624-69044643 | Msa0420530:CDS | 45.0% | |
| GCAGATATTCTCACCCTTCA+GGG | + | chr3_2:69044651-69044670 | None:intergenic | 45.0% | |
| TGCAGATATTCTCACCCTTC+AGG | + | chr3_2:69044652-69044671 | None:intergenic | 45.0% | |
| !! | TTTAAAAATAAATAAAAAAG+CGG | - | chr3_2:69041044-69041063 | Msa0420530:three_prime_UTR | 5.0% |
| CTTGTTCAAGAGAACGAGCG+TGG | + | chr3_2:69041257-69041276 | None:intergenic | 50.0% | |
| TCGATGCAGGTTAAGGCAGT+TGG | - | chr3_2:69042757-69042776 | Msa0420530:intron | 50.0% | |
| CCAAGTTACGCAGCACATAC+TGG | + | chr3_2:69042858-69042877 | None:intergenic | 50.0% | |
| CCAGTATGTGCTGCGTAACT+TGG | - | chr3_2:69042855-69042874 | Msa0420530:intron | 50.0% | |
| TGCTGCGTAACTTGGATCGT+GGG | - | chr3_2:69042863-69042882 | Msa0420530:intron | 50.0% | |
| GTTCACTGTGCATGCACTTG+GGG | - | chr3_2:69043191-69043210 | Msa0420530:CDS | 50.0% | |
| TGTAGATCGTGAGGAGGAGT+AGG | - | chr3_2:69043576-69043595 | Msa0420530:intron | 50.0% | |
| TGAGGAGGAGTAGGATGCAT+GGG | - | chr3_2:69043585-69043604 | Msa0420530:intron | 50.0% | |
| CTGGTATGCATCGGAATGAG+TGG | - | chr3_2:69043885-69043904 | Msa0420530:intron | 50.0% | |
| TATGCATCGGAATGAGTGGG+TGG | - | chr3_2:69043889-69043908 | Msa0420530:intron | 50.0% | |
| CATGCAGTGACAAGCAACAG+AGG | + | chr3_2:69044053-69044072 | None:intergenic | 50.0% | |
| ! | CTCTGTTGCTTGTCACTGCA+TGG | - | chr3_2:69044051-69044070 | Msa0420530:intron | 50.0% |
| CAGAAACAGAAGTTCAGGGC+AGG | + | chr3_2:69044495-69044514 | None:intergenic | 50.0% | |
| TTCAGGGCCCTATCTCAAGT+TGG | + | chr3_2:69044635-69044654 | None:intergenic | 50.0% | |
| AACTTGAGATAGGGCCCTGA+AGG | - | chr3_2:69044634-69044653 | Msa0420530:CDS | 50.0% | |
| ACTTGAGATAGGGCCCTGAA+GGG | - | chr3_2:69044635-69044654 | Msa0420530:CDS | 50.0% | |
| TCCATCGGCGTAGACACGAA+CGG | + | chr3_2:69041211-69041230 | None:intergenic | 55.0% | |
| TGTTGGATGCTGCAGCGATG+CGG | - | chr3_2:69041397-69041416 | Msa0420530:three_prime_UTR | 55.0% | |
| GTGCTGCGTAACTTGGATCG+TGG | - | chr3_2:69042862-69042881 | Msa0420530:intron | 55.0% | |
| ACTGTGCATGCACTTGGGGA+CGG | - | chr3_2:69043195-69043214 | Msa0420530:intron | 55.0% | |
| GTGAGGAGGAGTAGGATGCA+TGG | - | chr3_2:69043584-69043603 | Msa0420530:intron | 55.0% | |
| !! | GGCCCTATCTCAAGTTGGTG+TGG | + | chr3_2:69044630-69044649 | None:intergenic | 55.0% |
| CATCGGCGTAGACACGAACG+GGG | + | chr3_2:69041209-69041228 | None:intergenic | 60.0% | |
| CCATCGGCGTAGACACGAAC+GGG | + | chr3_2:69041210-69041229 | None:intergenic | 60.0% | |
| CTGTGCATGCACTTGGGGAC+GGG | - | chr3_2:69043196-69043215 | Msa0420530:intron | 60.0% | |
| TGTGCATGCACTTGGGGACG+GGG | - | chr3_2:69043197-69043216 | Msa0420530:intron | 60.0% | |
| CTTCAGGCGGAGGGAGGTGA+GGG | + | chr3_2:69041182-69041201 | None:intergenic | 65.0% | |
| TCTTCAGGCGGAGGGAGGTG+AGG | + | chr3_2:69041183-69041202 | None:intergenic | 65.0% | |
| ACACGAACGGGGCGGTCTTC+AGG | + | chr3_2:69041198-69041217 | None:intergenic | 65.0% | |
| CCCGTTCGTGTCTACGCCGA+TGG | - | chr3_2:69041207-69041226 | Msa0420530:three_prime_UTR | 65.0% | |
| ATGCACTTGGGGACGGGGCA+AGG | - | chr3_2:69043202-69043221 | Msa0420530:intron | 65.0% | |
| TGCACTTGGGGACGGGGCAA+GGG | - | chr3_2:69043203-69043222 | Msa0420530:intron | 65.0% | |
| CGGAGGGAGGTGAGGGATGG+TGG | + | chr3_2:69041175-69041194 | None:intergenic | 70.0% | |
| AGGCGGAGGGAGGTGAGGGA+TGG | + | chr3_2:69041178-69041197 | None:intergenic | 70.0% | |
| CGAACGGGGCGGTCTTCAGG+CGG | + | chr3_2:69041195-69041214 | None:intergenic | 70.0% | |
| CGGCGTAGACACGAACGGGG+CGG | + | chr3_2:69041206-69041225 | None:intergenic | 70.0% | |
| TGGGGACGGGGCAAGGGAAG+AGG | - | chr3_2:69043209-69043228 | Msa0420530:intron | 70.0% | |
| GGCGGTCTTCAGGCGGAGGG+AGG | + | chr3_2:69041188-69041207 | None:intergenic | 75.0% | |
| CGGGGCGGTCTTCAGGCGGA+GGG | + | chr3_2:69041191-69041210 | None:intergenic | 75.0% | |
| ACGGGGCGGTCTTCAGGCGG+AGG | + | chr3_2:69041192-69041211 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 69040976 | 69044864 | 69040976 | ID=Msa0420530;Name=Msa0420530 |
| chr3_2 | mRNA | 69040976 | 69044864 | 69040976 | ID=Msa0420530-mRNA-1;Parent=Msa0420530;Name=Msa0420530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=183|1|1|1|1|1|8|570|308 |
| chr3_2 | exon | 69040976 | 69041755 | 69040976 | ID=Msa0420530-mRNA-1:exon:16348;Parent=Msa0420530-mRNA-1 |
| chr3_2 | exon | 69041867 | 69041977 | 69041867 | ID=Msa0420530-mRNA-1:exon:16347;Parent=Msa0420530-mRNA-1 |
| chr3_2 | exon | 69042707 | 69042775 | 69042707 | ID=Msa0420530-mRNA-1:exon:16346;Parent=Msa0420530-mRNA-1 |
| chr3_2 | exon | 69042919 | 69043074 | 69042919 | ID=Msa0420530-mRNA-1:exon:16345;Parent=Msa0420530-mRNA-1 |
| chr3_2 | exon | 69043170 | 69043212 | 69043170 | ID=Msa0420530-mRNA-1:exon:16344;Parent=Msa0420530-mRNA-1 |
| chr3_2 | exon | 69044152 | 69044247 | 69044152 | ID=Msa0420530-mRNA-1:exon:16343;Parent=Msa0420530-mRNA-1 |
| chr3_2 | exon | 69044351 | 69044464 | 69044351 | ID=Msa0420530-mRNA-1:exon:16342;Parent=Msa0420530-mRNA-1 |
| chr3_2 | exon | 69044554 | 69044864 | 69044554 | ID=Msa0420530-mRNA-1:exon:16341;Parent=Msa0420530-mRNA-1 |
| chr3_2 | five_prime_UTR | 69044682 | 69044864 | 69044682 | ID=Msa0420530-mRNA-1:five_prime_utr;Parent=Msa0420530-mRNA-1 |
| chr3_2 | CDS | 69044554 | 69044681 | 69044554 | ID=Msa0420530-mRNA-1:cds;Parent=Msa0420530-mRNA-1 |
| chr3_2 | CDS | 69044351 | 69044464 | 69044351 | ID=Msa0420530-mRNA-1:cds;Parent=Msa0420530-mRNA-1 |
| chr3_2 | CDS | 69044152 | 69044247 | 69044152 | ID=Msa0420530-mRNA-1:cds;Parent=Msa0420530-mRNA-1 |
| chr3_2 | CDS | 69043170 | 69043212 | 69043170 | ID=Msa0420530-mRNA-1:cds;Parent=Msa0420530-mRNA-1 |
| chr3_2 | CDS | 69042919 | 69043074 | 69042919 | ID=Msa0420530-mRNA-1:cds;Parent=Msa0420530-mRNA-1 |
| chr3_2 | CDS | 69042707 | 69042775 | 69042707 | ID=Msa0420530-mRNA-1:cds;Parent=Msa0420530-mRNA-1 |
| chr3_2 | CDS | 69041867 | 69041977 | 69041867 | ID=Msa0420530-mRNA-1:cds;Parent=Msa0420530-mRNA-1 |
| chr3_2 | CDS | 69041546 | 69041755 | 69041546 | ID=Msa0420530-mRNA-1:cds;Parent=Msa0420530-mRNA-1 |
| chr3_2 | three_prime_UTR | 69040976 | 69041545 | 69040976 | ID=Msa0420530-mRNA-1:three_prime_utr;Parent=Msa0420530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
