Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382210 | XP_003603240.2 | 99.163 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382210 | sp|Q9C5Z1|EIF3B_ARATH | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382210 | G7J950 | 99.163 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1461 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046830 | Msa0382210 | 0.952864 | 9.640125e-111 | -8.615850e-47 |
| Msa0138890 | Msa0382210 | 0.805691 | 1.181313e-49 | -8.615850e-47 |
| Msa0192230 | Msa0382210 | 0.832995 | 6.876435e-56 | -8.615850e-47 |
| Msa0382210 | Msa0430230 | 0.804260 | 2.352446e-49 | -8.615850e-47 |
| Msa0382210 | Msa0435370 | 0.824345 | 8.489400e-54 | -8.615850e-47 |
| Msa0382210 | Msa0435420 | 0.801390 | 9.210405e-49 | -8.615850e-47 |
| Msa0382210 | Msa0435570 | 0.806764 | 7.020379e-50 | -8.615850e-47 |
| Msa0382210 | Msa0781310 | 0.806484 | 8.042394e-50 | -8.615850e-47 |
| Msa0382210 | Msa0860860 | 0.806448 | 8.186320e-50 | -8.615850e-47 |
| Msa0382210 | Msa1012770 | 0.809524 | 1.813853e-50 | -8.615850e-47 |
| Msa0382210 | Msa1039520 | 0.808370 | 3.202502e-50 | -8.615850e-47 |
| Msa0382210 | Msa1048690 | 0.805165 | 1.523106e-49 | -8.615850e-47 |
| Msa0382210 | Msa1403570 | 0.801031 | 1.090744e-48 | -8.615850e-47 |
| Msa0297830 | Msa0382210 | 0.805541 | 1.270045e-49 | -8.615850e-47 |
| Msa0335840 | Msa0382210 | 0.801835 | 7.466248e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382210 | MtrunA17_Chr3g0136501 | 99.163 | 717 | 5 | 1 | 1 | 717 | 1 | 716 | 0.0 | 1461 |
| Msa0382210 | MtrunA17_Chr7g0235801 | 83.505 | 97 | 16 | 0 | 603 | 699 | 10 | 106 | 6.62e-46 | 160 |
| Msa0382210 | MtrunA17_Chr4g0045551 | 24.000 | 400 | 265 | 14 | 225 | 615 | 51 | 420 | 2.97e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382210 | AT5G27640.3 | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| Msa0382210 | AT5G27640.1 | 76.197 | 710 | 168 | 1 | 5 | 713 | 1 | 710 | 0.0 | 1157 |
| Msa0382210 | AT5G25780.1 | 76.504 | 698 | 163 | 1 | 17 | 713 | 14 | 711 | 0.0 | 1149 |
| Msa0382210 | AT5G27640.2 | 73.505 | 736 | 168 | 2 | 5 | 713 | 1 | 736 | 0.0 | 1144 |
| Msa0382210 | AT1G49015.1 | 50.885 | 226 | 91 | 5 | 311 | 535 | 3 | 209 | 7.59e-66 | 217 |
| Msa0382210 | AT1G73180.2 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.42e-24 | 107 |
| Msa0382210 | AT1G73180.1 | 22.931 | 423 | 290 | 11 | 195 | 610 | 18 | 411 | 2.60e-24 | 107 |
Find 203 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGGATCACTTCTTTC+AGG | 0.197022 | 3_1:-84696215 | Msa0382210:intron |
| TCAGTTCATGAAATGGAAAA+TGG | 0.213561 | 3_1:-84696280 | Msa0382210:CDS |
| TTGCCTGAGTTCTTCTTTGC+TGG | 0.214747 | 3_1:+84696983 | None:intergenic |
| TTCAATATATATAGTTCTTA+TGG | 0.217744 | 3_1:-84695906 | Msa0382210:intron |
| CTGGAGTTTGATTCTGGATT+TGG | 0.226852 | 3_1:-84698973 | Msa0382210:CDS |
| ACATACTCACAGAAAATATA+TGG | 0.231895 | 3_1:+84698632 | None:intergenic |
| GAGAATCTGGAGTTTGATTC+TGG | 0.241775 | 3_1:-84698979 | Msa0382210:CDS |
| TTCACCTGGTGAGAAGTATT+TGG | 0.260721 | 3_1:-84697688 | Msa0382210:CDS |
| TTTGAAGGTTGAAAATATAA+TGG | 0.262529 | 3_1:-84697233 | Msa0382210:CDS |
| GAAGACAAAGCTTTGCTTCT+CGG | 0.279856 | 3_1:-84699183 | Msa0382210:CDS |
| CTCGAGGATTGCTTGGTTCA+TGG | 0.280093 | 3_1:+84697652 | None:intergenic |
| CCTGGAGCATATTCCTTGTT+TGG | 0.282373 | 3_1:+84698559 | None:intergenic |
| TGGAAAATGGATTCAATATA+TGG | 0.298256 | 3_1:-84696267 | Msa0382210:CDS |
| CTTACAGCACGTTTATAAAC+AGG | 0.307612 | 3_1:+84698077 | None:intergenic |
| GTATGTCACGTTCCTTTATA+CGG | 0.318455 | 3_1:+84696838 | None:intergenic |
| GCCTATGTTATCATGGACTA+TGG | 0.330399 | 3_1:-84695252 | Msa0382210:three_prime_UTR |
| TGCCTGAGTTCTTCTTTGCT+GGG | 0.335374 | 3_1:+84696984 | None:intergenic |
| CATAGATTTGCTGTTATTCA+TGG | 0.340404 | 3_1:-84696747 | Msa0382210:CDS |
| GTCACCTTTGGGTACTTACT+TGG | 0.345166 | 3_1:-84697925 | Msa0382210:CDS |
| ATTGCGGTGGTGAGTGATTA+TGG | 0.348784 | 3_1:+84699237 | None:intergenic |
| TCAATGGCAAACATCTTTAT+CGG | 0.350253 | 3_1:-84696240 | Msa0382210:CDS |
| GCGACAACGCTAAAGCTTTA+CGG | 0.354532 | 3_1:-84699262 | Msa0382210:five_prime_UTR |
| ATGCAACAGCTTCCATTCAT+TGG | 0.362435 | 3_1:+84695714 | None:intergenic |
| TTCCTCAACTTCAATGTCCT+TGG | 0.368351 | 3_1:+84695621 | None:intergenic |
| TGACATACCTATTGAAGTTC+TGG | 0.372905 | 3_1:-84696823 | Msa0382210:CDS |
| AGTCAAGAAAGAGGCTGGTC+TGG | 0.374540 | 3_1:+84695879 | None:intergenic |
| AGCAGGCAAATGCTTTGTTT+TGG | 0.385029 | 3_1:-84696635 | Msa0382210:CDS |
| TAGATACTAATATCAGGCTT+AGG | 0.385115 | 3_1:+84696717 | None:intergenic |
| CTCAACTTGAAGGATCTCTT+TGG | 0.396493 | 3_1:+84695585 | None:intergenic |
| TCCTTCTACTGAAAAGTCCT+TGG | 0.402875 | 3_1:-84698821 | Msa0382210:CDS |
| TAGGCCTGTAAAACAATAAT+CGG | 0.409843 | 3_1:+84695270 | None:intergenic |
| TAGTTATCCTAGTAGCTAGT+TGG | 0.411219 | 3_1:-84695486 | Msa0382210:three_prime_UTR |
| AATGGATATGTCTGTGGATT+GGG | 0.412928 | 3_1:+84699524 | None:intergenic |
| AGGAACAAACAATGAAATGA+TGG | 0.426468 | 3_1:+84697186 | None:intergenic |
| TAACAGACTTGTGTCTGAAA+AGG | 0.427088 | 3_1:+84695347 | None:intergenic |
| TTAGCGTTGTCGCAGTGAAA+TGG | 0.428140 | 3_1:+84699272 | None:intergenic |
| ATAGAGTAGATACTAATATC+AGG | 0.429014 | 3_1:+84696711 | None:intergenic |
| TGTTATTCAAGAGGAGAATC+TGG | 0.430382 | 3_1:-84698992 | Msa0382210:CDS |
| TCGAGCTCCAGAACTTCAAT+AGG | 0.431350 | 3_1:+84696816 | None:intergenic |
| TCATTGTTTGTTCCTGAGAC+AGG | 0.434027 | 3_1:-84697178 | Msa0382210:CDS |
| ATAAGATCATTGCATTTGCT+TGG | 0.434886 | 3_1:-84696782 | Msa0382210:CDS |
| CTCTTTCTTGACTGCTGAGA+AGG | 0.436026 | 3_1:-84695869 | Msa0382210:CDS |
| GAAAGGTTTCAATGGACTGT+TGG | 0.438764 | 3_1:-84696577 | Msa0382210:CDS |
| GGAGGAGGAGCCCACTCGTC+TGG | 0.438943 | 3_1:+84698580 | None:intergenic |
| CTAGCATTTAAGTGCTAAGA+TGG | 0.439060 | 3_1:+84695309 | None:intergenic |
| AATTTCTCCTTGGGAACAAC+AGG | 0.441899 | 3_1:+84698925 | None:intergenic |
| TTTACAGGCCTATGTTATCA+TGG | 0.444567 | 3_1:-84695259 | Msa0382210:three_prime_UTR |
| ATATGTCTGTGGATTGGGCT+CGG | 0.444679 | 3_1:+84699529 | None:intergenic |
| AGTTATCCTAGTAGCTAGTT+GGG | 0.445581 | 3_1:-84695485 | Msa0382210:three_prime_UTR |
| AAGCTTCTCGAATTTCTCCT+TGG | 0.445814 | 3_1:+84698915 | None:intergenic |
| TAAGATCATTGCATTTGCTT+GGG | 0.448404 | 3_1:-84696781 | Msa0382210:CDS |
| TAGTTGTTGACGGCGGCAAT+CGG | 0.449280 | 3_1:+84699430 | None:intergenic |
| CTTGGCAACAGTTCACCGTC+AGG | 0.449567 | 3_1:-84697907 | Msa0382210:CDS |
| CTATTAAAGAGGATGGTCTC+TGG | 0.450216 | 3_1:-84698855 | Msa0382210:CDS |
| AGAGAGATGTACTTGAAAAC+AGG | 0.450761 | 3_1:+84697431 | None:intergenic |
| GGAGCATATTCCTTGTTTGG+AGG | 0.451980 | 3_1:+84698562 | None:intergenic |
| ACAGCAAATCTATGTCCCTT+TGG | 0.453395 | 3_1:+84696756 | None:intergenic |
| AGCTTCTCGAATTTCTCCTT+GGG | 0.454211 | 3_1:+84698916 | None:intergenic |
| TTCAATATATGGTCTTTCAA+TGG | 0.455846 | 3_1:-84696256 | Msa0382210:CDS |
| AACCAGCACGAATCACAAAC+TGG | 0.455853 | 3_1:+84698147 | None:intergenic |
| GAAGACTCAAGGATACAAAC+TGG | 0.456776 | 3_1:-84698662 | Msa0382210:CDS |
| TTTATGCAACTGATGTTGAA+TGG | 0.458529 | 3_1:-84696506 | Msa0382210:CDS |
| TGTAACTTCAGTTCATGAAA+TGG | 0.459413 | 3_1:-84696287 | Msa0382210:CDS |
| TGATAAGTACTTTGCAAGGA+TGG | 0.459925 | 3_1:-84697314 | Msa0382210:CDS |
| CCTTCTACTGAAAAGTCCTT+GGG | 0.460856 | 3_1:-84698820 | Msa0382210:CDS |
| TTTGTTGATTTAGGGTTTGG+AGG | 0.461123 | 3_1:+84699493 | None:intergenic |
| CCAAACAAGGAATATGCTCC+AGG | 0.464666 | 3_1:-84698559 | Msa0382210:CDS |
| GAGGCGAAGAAGTATGTAAC+TGG | 0.467713 | 3_1:-84695537 | Msa0382210:three_prime_UTR |
| GTATGTAACTGGCTAGTAGA+TGG | 0.467949 | 3_1:-84695526 | Msa0382210:three_prime_UTR |
| GTCAAGAAAGAGGCTGGTCT+GGG | 0.472650 | 3_1:+84695880 | None:intergenic |
| TTTGTACAATGGTCACCTTT+GGG | 0.473131 | 3_1:-84697936 | Msa0382210:CDS |
| AACAGACTTGTGTCTGAAAA+GGG | 0.474344 | 3_1:+84695348 | None:intergenic |
| CATGCGTTACGCACATCCTC+AGG | 0.475971 | 3_1:-84697844 | Msa0382210:intron |
| GGAGGTACTGGAGGTGTCAC+TGG | 0.476252 | 3_1:-84697464 | Msa0382210:CDS |
| TGAAAGAAGATTGGGACAAG+TGG | 0.476327 | 3_1:-84695738 | Msa0382210:CDS |
| CATTGAAGTTGAGGAAATAG+TGG | 0.477980 | 3_1:-84695614 | Msa0382210:CDS |
| CAGCCAGGTTTAGTTGTTGA+CGG | 0.479174 | 3_1:+84699420 | None:intergenic |
| TGCATTTGCTTGGGAGCCAA+AGG | 0.480773 | 3_1:-84696772 | Msa0382210:CDS |
| GGTTTGGAGGCTCTTCCAAA+TGG | 0.481121 | 3_1:+84699506 | None:intergenic |
| AAAATATAATGGATTTCAGC+TGG | 0.484915 | 3_1:-84697222 | Msa0382210:CDS |
| GAGTAGTGAGCTTTGAAACT+CGG | 0.485051 | 3_1:+84696667 | None:intergenic |
| GCTAATACTCCTCAACTTGA+AGG | 0.487202 | 3_1:+84695575 | None:intergenic |
| CAAAGGAAAATCTGCAACAA+TGG | 0.488176 | 3_1:-84698193 | Msa0382210:intron |
| AAACAGAAATTTACCCTAGC+AGG | 0.488817 | 3_1:+84697142 | None:intergenic |
| GGGACAAGTGGGCCAATGAA+TGG | 0.489541 | 3_1:-84695726 | Msa0382210:CDS |
| AGAAGCTAGTGATGAGGAAG+AGG | 0.489836 | 3_1:-84695653 | Msa0382210:CDS |
| TTATGCAACTGATGTTGAAT+GGG | 0.491113 | 3_1:-84696505 | Msa0382210:CDS |
| TGGTTACCACCTCCTGTCTC+AGG | 0.491207 | 3_1:+84697166 | None:intergenic |
| GTAGGGTCTTGAAAGAAGAT+TGG | 0.493073 | 3_1:-84695747 | Msa0382210:CDS |
| GCATATTCCTTGTTTGGAGG+AGG | 0.495988 | 3_1:+84698565 | None:intergenic |
| ATGAAGAAGAGAAGCTAGAG+AGG | 0.497330 | 3_1:-84695693 | Msa0382210:CDS |
| AGATACTAATATCAGGCTTA+GGG | 0.497798 | 3_1:+84696718 | None:intergenic |
| GACCAGTTTGTGATTCGTGC+TGG | 0.499072 | 3_1:-84698149 | Msa0382210:CDS |
| GCAGGATTGAAAGGTTTCAA+TGG | 0.500217 | 3_1:-84696585 | Msa0382210:CDS |
| AGGATTCCGCAGTTGTCACC+TGG | 0.502357 | 3_1:+84699117 | None:intergenic |
| AAATGGATATGTCTGTGGAT+TGG | 0.503467 | 3_1:+84699523 | None:intergenic |
| GCACGTTTATAAACAGGGTC+GGG | 0.503903 | 3_1:+84698083 | None:intergenic |
| AATCCACAGACATATCCATT+TGG | 0.506225 | 3_1:-84699521 | Msa0382210:five_prime_UTR |
| GAGGTGGTAACCAGCCTGCT+AGG | 0.506612 | 3_1:-84697156 | Msa0382210:CDS |
| TTAGCATCTCGAGGATTGCT+TGG | 0.508363 | 3_1:+84697645 | None:intergenic |
| TAGGGTCTTGAAAGAAGATT+GGG | 0.508845 | 3_1:-84695746 | Msa0382210:CDS |
| AACAAGAGCGTGAGAAGCGT+AGG | 0.510887 | 3_1:-84695765 | Msa0382210:CDS |
| TATGTCTGTGGATTGGGCTC+GGG | 0.511737 | 3_1:+84699530 | None:intergenic |
| GGAACAAACAATGAAATGAT+GGG | 0.513266 | 3_1:+84697187 | None:intergenic |
| GATTCCATTCACCTTCCTCC+AGG | 0.514429 | 3_1:-84699135 | Msa0382210:CDS |
| ACACTGCCCAACTAGCTACT+AGG | 0.516582 | 3_1:+84695479 | None:intergenic |
| GGTCGCTTCATTGTACTAGC+AGG | 0.518685 | 3_1:-84696603 | Msa0382210:CDS |
| GATGTTGAATGGGATCCAAC+TGG | 0.519724 | 3_1:-84696495 | Msa0382210:CDS |
| CACTACTCTGAAAGGCAAGC+AGG | 0.520325 | 3_1:-84696652 | Msa0382210:CDS |
| GCCTGAGTTCTTCTTTGCTG+GGG | 0.521347 | 3_1:+84696985 | None:intergenic |
| CCGCCGTCAACAACTAAACC+TGG | 0.522577 | 3_1:-84699423 | Msa0382210:five_prime_UTR |
| CATACTCACAGAAAATATAT+GGG | 0.522843 | 3_1:+84698633 | None:intergenic |
| TCAGCAGCAATGAAACATCT+TGG | 0.522882 | 3_1:+84695791 | None:intergenic |
| GTCACCTGGAGGAAGGTGAA+TGG | 0.523301 | 3_1:+84699131 | None:intergenic |
| TTTGTTCCTGAGACAGGAGG+TGG | 0.523334 | 3_1:-84697172 | Msa0382210:CDS |
| GTGACAACTGCGGAATCCTC+AGG | 0.526265 | 3_1:-84699113 | Msa0382210:intron |
| ATTTGGCAATATTATTGTAG+TGG | 0.528989 | 3_1:-84698956 | Msa0382210:CDS |
| CGCTTACCGACGGCACAGCC+AGG | 0.531040 | 3_1:+84699405 | None:intergenic |
| ATGCGGACGGCTCAGAACAC+TGG | 0.531191 | 3_1:-84696690 | Msa0382210:CDS |
| ATCACTCACCACCGCAATCA+TGG | 0.534565 | 3_1:-84699232 | Msa0382210:exon |
| CTTCTCAGCAGTCAAGAAAG+AGG | 0.535616 | 3_1:+84695870 | None:intergenic |
| CAAAGAGATCCTTCAAGTTG+AGG | 0.540194 | 3_1:-84695584 | Msa0382210:CDS |
| CGCAGTTGTCACCTGGAGGA+AGG | 0.540787 | 3_1:+84699124 | None:intergenic |
| AATGGAATCGAGATCGATAG+AGG | 0.542175 | 3_1:+84699149 | None:intergenic |
| ATTGTACTAGCAGGATTGAA+AGG | 0.547734 | 3_1:-84696594 | Msa0382210:CDS |
| TAGATAATATACCTTCCAGT+TGG | 0.547750 | 3_1:+84696480 | None:intergenic |
| TCAGCAGTCAAGAAAGAGGC+TGG | 0.549593 | 3_1:+84695874 | None:intergenic |
| AGCACGTTTATAAACAGGGT+CGG | 0.550976 | 3_1:+84698082 | None:intergenic |
| ACAAAGAAAAGCACATTCAC+AGG | 0.551860 | 3_1:-84696873 | Msa0382210:CDS |
| CATTGAGTACAATACTCCTC+AGG | 0.551994 | 3_1:-84698788 | Msa0382210:intron |
| GCATTTGCTTGGGAGCCAAA+GGG | 0.553319 | 3_1:-84696771 | Msa0382210:CDS |
| AGCCAAGGACATTGAAGTTG+AGG | 0.555326 | 3_1:-84695623 | Msa0382210:CDS |
| TAATCTACCTGTTGTTCCCA+AGG | 0.563226 | 3_1:-84698932 | Msa0382210:CDS |
| AACATATTTGATGTGAGGAC+TGG | 0.564013 | 3_1:-84697533 | Msa0382210:CDS |
| TTCAGTGCAACGGAAGCGCA+AGG | 0.564465 | 3_1:+84699458 | None:intergenic |
| ACATCTTTATCGGATATTGA+AGG | 0.564648 | 3_1:-84696230 | Msa0382210:CDS |
| TTTCTTGACTGCTGAGAAGG+AGG | 0.564955 | 3_1:-84695866 | Msa0382210:CDS |
| TCAGTGACTGCAAGATGTAC+TGG | 0.566940 | 3_1:-84696944 | Msa0382210:CDS |
| AGCTAGAGAGGGAAAATCTG+AGG | 0.568066 | 3_1:-84695681 | Msa0382210:CDS |
| AGTACAATGAAGCGACCTGC+TGG | 0.569021 | 3_1:+84696609 | None:intergenic |
| AAAATGTTCAGTATTAGCCA+TGG | 0.570734 | 3_1:+84696527 | None:intergenic |
| TCAGATTGGTGCTATTAAAG+AGG | 0.572204 | 3_1:-84698866 | Msa0382210:CDS |
| ACAATGGCTTACTGATGCTA+AGG | 0.574787 | 3_1:-84698177 | Msa0382210:CDS |
| TTGTTTGTTCCTGAGACAGG+AGG | 0.576213 | 3_1:-84697175 | Msa0382210:CDS |
| ACTAAACCTGGCTGTGCCGT+CGG | 0.578062 | 3_1:-84699411 | Msa0382210:five_prime_UTR |
| CAGTGCAACGGAAGCGCAAG+GGG | 0.578270 | 3_1:+84699460 | None:intergenic |
| GATAAGTACTTTGCAAGGAT+GGG | 0.579491 | 3_1:-84697313 | Msa0382210:CDS |
| TCAAAGCTCACTACTCTGAA+AGG | 0.580014 | 3_1:-84696660 | Msa0382210:CDS |
| ATTGGTGCTATTAAAGAGGA+TGG | 0.581702 | 3_1:-84698862 | Msa0382210:CDS |
| TTGGCAACAGTTCACCGTCA+GGG | 0.582074 | 3_1:-84697906 | Msa0382210:CDS |
| GTAACGCATGAGACGATTGA+AGG | 0.583285 | 3_1:+84697857 | None:intergenic |
| AGAAATTTACCCTAGCAGGC+TGG | 0.583948 | 3_1:+84697146 | None:intergenic |
| CATGAAAGTGCCAGACGAGT+GGG | 0.584342 | 3_1:-84698590 | Msa0382210:CDS |
| GTGGGCTCCTCCTCCAAACA+AGG | 0.584356 | 3_1:-84698572 | Msa0382210:CDS |
| TCGCCTCACTCTTGAAAACA+TGG | 0.584580 | 3_1:+84695553 | None:intergenic |
| AATGAAATGATGGGATCAGT+TGG | 0.584945 | 3_1:+84697196 | None:intergenic |
| CATTACATCCGCCATGATTG+CGG | 0.586421 | 3_1:+84699221 | None:intergenic |
| TCCCCAGCAAAGAAGAACTC+AGG | 0.587881 | 3_1:-84696986 | Msa0382210:CDS |
| TGACGATGATGTTATTCAAG+AGG | 0.592706 | 3_1:-84699001 | Msa0382210:CDS |
| ATCGGTAGAGTTCAGTGCAA+CGG | 0.593909 | 3_1:+84699448 | None:intergenic |
| GAGGTGTCACTGGAGTGTCA+TGG | 0.597067 | 3_1:-84697454 | Msa0382210:CDS |
| CTTCCAAATGGATATGTCTG+TGG | 0.597999 | 3_1:+84699518 | None:intergenic |
| TCATGAAAGTGCCAGACGAG+TGG | 0.602382 | 3_1:-84698591 | Msa0382210:CDS |
| AGGTGGTAACCAGCCTGCTA+GGG | 0.602403 | 3_1:-84697155 | Msa0382210:intron |
| AAGATGATAAGTACTTTGCA+AGG | 0.602451 | 3_1:-84697318 | Msa0382210:CDS |
| TTTGCTATCGGAGGTACTGG+AGG | 0.604919 | 3_1:-84697473 | Msa0382210:CDS |
| GAAAGAAGATTGGGACAAGT+GGG | 0.605311 | 3_1:-84695737 | Msa0382210:CDS |
| TTTCTTTGCAGATGGAGTGG+TGG | 0.605394 | 3_1:-84697343 | Msa0382210:intron |
| GGAAGAGGAATATGAAGCCA+AGG | 0.609071 | 3_1:-84695638 | Msa0382210:CDS |
| CTGGCTGTGCCGTCGGTAAG+CGG | 0.609889 | 3_1:-84699404 | Msa0382210:intron |
| CTTGCTAAAGAGAAGACTCA+AGG | 0.612535 | 3_1:-84698673 | Msa0382210:CDS |
| CAAACAAGGAATATGCTCCA+GGG | 0.614249 | 3_1:-84698558 | Msa0382210:CDS |
| GAGAGGGAAAATCTGAGGGA+CGG | 0.615059 | 3_1:-84695676 | Msa0382210:CDS |
| TCAGTGCAACGGAAGCGCAA+GGG | 0.616804 | 3_1:+84699459 | None:intergenic |
| TCGTGCTGGTTCAGATACTG+AGG | 0.620611 | 3_1:-84698135 | Msa0382210:CDS |
| ACCATAGTCCATGATAACAT+AGG | 0.624794 | 3_1:+84695251 | None:intergenic |
| AACGATCAACATTAACAGCA+AGG | 0.625990 | 3_1:+84696904 | None:intergenic |
| GGATTCTTACCGCTTACCGA+CGG | 0.626941 | 3_1:+84699395 | None:intergenic |
| GGACGGAGAAGCTAGTGATG+AGG | 0.627430 | 3_1:-84695659 | Msa0382210:CDS |
| GTTACCAAATACTTCTCACC+AGG | 0.628866 | 3_1:+84697684 | None:intergenic |
| TGGCAACAGTTCACCGTCAG+GGG | 0.629158 | 3_1:-84697905 | Msa0382210:CDS |
| GCTAGAGAGGGAAAATCTGA+GGG | 0.630478 | 3_1:-84695680 | Msa0382210:CDS |
| AAGATGTACTGGCAGAGCAA+TGG | 0.630702 | 3_1:-84696933 | Msa0382210:CDS |
| TAGTATCTACTCTATGCGGA+CGG | 0.640265 | 3_1:-84696703 | Msa0382210:CDS |
| CTCAATGAAGCAGTAACCCA+AGG | 0.644342 | 3_1:+84698804 | None:intergenic |
| GGCAACAGTTCACCGTCAGG+GGG | 0.645973 | 3_1:-84697904 | Msa0382210:CDS |
| TTGAATGGGATCCAACTGGA+AGG | 0.646444 | 3_1:-84696491 | Msa0382210:intron |
| TACATCCGCCATGATTGCGG+TGG | 0.656957 | 3_1:+84699224 | None:intergenic |
| ACAAGAGCGTGAGAAGCGTA+GGG | 0.657658 | 3_1:-84695764 | Msa0382210:CDS |
| AAACAAGGAATATGCTCCAG+GGG | 0.658157 | 3_1:-84698557 | Msa0382210:intron |
| TGATAAACATATTTGATGTG+AGG | 0.659557 | 3_1:-84697538 | Msa0382210:CDS |
| TGTTGATGAGCTTGAAACCA+TGG | 0.663924 | 3_1:-84696544 | Msa0382210:CDS |
| TGAAGAAGAGAAGCTAGAGA+GGG | 0.666164 | 3_1:-84695692 | Msa0382210:CDS |
| ACACTCACATTAGCATCTCG+AGG | 0.667806 | 3_1:+84697636 | None:intergenic |
| TTACAGCACGTTTATAAACA+GGG | 0.671673 | 3_1:+84698078 | None:intergenic |
| ACGCATGAGACGATTGAAGG+TGG | 0.677518 | 3_1:+84697860 | None:intergenic |
| CTTCCTCCAGGTGACAACTG+CGG | 0.689197 | 3_1:-84699123 | Msa0382210:CDS |
| ATTCCGCAGTTGTCACCTGG+AGG | 0.690949 | 3_1:+84699120 | None:intergenic |
| GTTGCCAAGTAAGTACCCAA+AGG | 0.691070 | 3_1:+84697921 | None:intergenic |
| ATATTAGTATCTACTCTATG+CGG | 0.708759 | 3_1:-84696707 | Msa0382210:CDS |
| CCAGGTTTAGTTGTTGACGG+CGG | 0.714336 | 3_1:+84699423 | None:intergenic |
| GTCTACAAAGATGAACACAA+AGG | 0.743492 | 3_1:+84695456 | None:intergenic |
| ACTCACCACCGCAATCATGG+CGG | 0.744529 | 3_1:-84699229 | Msa0382210:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTAATATCTTTTACT+TGG | - | chr3_1:84696516-84696535 | Msa0382210:CDS | 10.0% |
| !!! | AATCATAAAATCTGAAATTA+TGG | + | chr3_1:84695722-84695741 | None:intergenic | 15.0% |
| !! | TTTGGTATAAAATTAACAAA+AGG | + | chr3_1:84696314-84696333 | None:intergenic | 15.0% |
| !!! | ATTTTATACCAAAAACAAAT+AGG | - | chr3_1:84696321-84696340 | Msa0382210:intron | 15.0% |
| !!! | TATTTTTTGAATTACAGTTT+TGG | - | chr3_1:84696807-84696826 | Msa0382210:CDS | 15.0% |
| !! | TTCAATATATATAGTTCTTA+TGG | - | chr3_1:84698869-84698888 | Msa0382210:CDS | 15.0% |
| !! | AACAAAAAAACTACAAAATT+GGG | + | chr3_1:84699344-84699363 | None:intergenic | 15.0% |
| !! | AAACAAAAAAACTACAAAAT+TGG | + | chr3_1:84699345-84699364 | None:intergenic | 15.0% |
| !! | TTCAAATTTATGAGAAAAAA+GGG | + | chr3_1:84699387-84699406 | None:intergenic | 15.0% |
| !! | AGAAAAATTTATAGTCAGAT+TGG | - | chr3_1:84695895-84695914 | Msa0382210:CDS | 20.0% |
| !!! | GTAAATAGATACTCTTTTTT+AGG | - | chr3_1:84696009-84696028 | Msa0382210:intron | 20.0% |
| !! | ATCATATTTGTAATTCTACA+AGG | + | chr3_1:84696430-84696449 | None:intergenic | 20.0% |
| !! | TGTAGAATTACAAATATGAT+TGG | - | chr3_1:84696430-84696449 | Msa0382210:intron | 20.0% |
| !!! | TGTATTATTTGATGTTTTCT+AGG | - | chr3_1:84696743-84696762 | Msa0382210:CDS | 20.0% |
| !! | TTAAGAGATTAATGATCAAA+GGG | + | chr3_1:84696770-84696789 | None:intergenic | 20.0% |
| !! | ATTAAGAGATTAATGATCAA+AGG | + | chr3_1:84696771-84696790 | None:intergenic | 20.0% |
| !! | AAAAATATGACAACCATAAA+GGG | + | chr3_1:84696794-84696813 | None:intergenic | 20.0% |
| !! | AAAAAATATGACAACCATAA+AGG | + | chr3_1:84696795-84696814 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAAAAACCTG+AGG | + | chr3_1:84696950-84696969 | None:intergenic | 20.0% |
| !! | AGTATATGAATATAAATCTC+AGG | - | chr3_1:84697048-84697067 | Msa0382210:intron | 20.0% |
| !! | TTTGAAGGTTGAAAATATAA+TGG | - | chr3_1:84697542-84697561 | Msa0382210:CDS | 20.0% |
| !!! | TTTTTAATTTCTGTTCTTGA+TGG | - | chr3_1:84697742-84697761 | Msa0382210:intron | 20.0% |
| !!! | ATGGTTATAGTTTTTTTACA+TGG | - | chr3_1:84698667-84698686 | Msa0382210:CDS | 20.0% |
| !!! | TGGTTATAGTTTTTTTACAT+GGG | - | chr3_1:84698668-84698687 | Msa0382210:CDS | 20.0% |
| !!! | AAATATTGTACAGCAATTTT+TGG | + | chr3_1:84698824-84698843 | None:intergenic | 20.0% |
| !! | GTTCAAATTTATGAGAAAAA+AGG | + | chr3_1:84699388-84699407 | None:intergenic | 20.0% |
| !!! | AACGATGTTTTGTTGATTTA+GGG | + | chr3_1:84695293-84695312 | None:intergenic | 25.0% |
| ! | AAGAGTAAATTAATGTGGAA+AGG | + | chr3_1:84695458-84695477 | None:intergenic | 25.0% |
| ! | GATAGAAGAGTAAATTAATG+TGG | + | chr3_1:84695463-84695482 | None:intergenic | 25.0% |
| ! | ATTTGGCAATATTATTGTAG+TGG | - | chr3_1:84695819-84695838 | Msa0382210:CDS | 25.0% |
| !!! | TTCAATGTTTGTTTTACCAT+CGG | - | chr3_1:84696037-84696056 | Msa0382210:intron | 25.0% |
| !!! | TAAATTGCAATGGCTATTTT+AGG | - | chr3_1:84696071-84696090 | Msa0382210:intron | 25.0% |
| ! | CATACTCACAGAAAATATAT+GGG | + | chr3_1:84696145-84696164 | None:intergenic | 25.0% |
| ! | ACATACTCACAGAAAATATA+TGG | + | chr3_1:84696146-84696165 | None:intergenic | 25.0% |
| ! | GTAGTTAGATACTTAGATTA+AGG | - | chr3_1:84696375-84696394 | Msa0382210:intron | 25.0% |
| !!! | ACAAATATGATTGGTTTACT+TGG | - | chr3_1:84696439-84696458 | Msa0382210:intron | 25.0% |
| ! | AATCACTATGTTCTTAAATC+TGG | - | chr3_1:84696479-84696498 | Msa0382210:intron | 25.0% |
| ! | TAAGAATCACTAAACATAGA+AGG | + | chr3_1:84696545-84696564 | None:intergenic | 25.0% |
| ! | CTATGTTTAGTGATTCTTAA+TGG | - | chr3_1:84696546-84696565 | Msa0382210:CDS | 25.0% |
| ! | TTAATCTCTTAATCCCTTTA+TGG | - | chr3_1:84696778-84696797 | Msa0382210:CDS | 25.0% |
| !!! | TTTTGAATTACAGTTTTGGA+CGG | - | chr3_1:84696811-84696830 | Msa0382210:CDS | 25.0% |
| ! | TGATAAACATATTTGATGTG+AGG | - | chr3_1:84697237-84697256 | Msa0382210:CDS | 25.0% |
| !! | TAAAGTGATGAGAGATTTTA+AGG | - | chr3_1:84697265-84697284 | Msa0382210:CDS | 25.0% |
| !! | AAAGTGATGAGAGATTTTAA+GGG | - | chr3_1:84697266-84697285 | Msa0382210:CDS | 25.0% |
| ! | ATGCAAATTCATCACTAAAT+TGG | + | chr3_1:84697409-84697428 | None:intergenic | 25.0% |
| !!! | AAAATATAATGGATTTCAGC+TGG | - | chr3_1:84697553-84697572 | Msa0382210:intron | 25.0% |
| ! | AATAAATACATACACACATG+AGG | + | chr3_1:84697720-84697739 | None:intergenic | 25.0% |
| ! | ATAGAGTAGATACTAATATC+AGG | + | chr3_1:84698067-84698086 | None:intergenic | 25.0% |
| ! | ATATTAGTATCTACTCTATG+CGG | - | chr3_1:84698068-84698087 | Msa0382210:intron | 25.0% |
| ! | AAGTCAACATTTAATAGCTA+CGG | + | chr3_1:84698401-84698420 | None:intergenic | 25.0% |
| ! | TGGATAACCAATATAAACAT+GGG | + | chr3_1:84698440-84698459 | None:intergenic | 25.0% |
| ! | ATGGATAACCAATATAAACA+TGG | + | chr3_1:84698441-84698460 | None:intergenic | 25.0% |
| !! | TGGAAAATGGATTCAATATA+TGG | - | chr3_1:84698508-84698527 | Msa0382210:intron | 25.0% |
| ! | TTCAATATATGGTCTTTCAA+TGG | - | chr3_1:84698519-84698538 | Msa0382210:intron | 25.0% |
| !! | ATTTTATCCGTGTATTACAA+TGG | - | chr3_1:84698610-84698629 | Msa0382210:CDS | 25.0% |
| ! | TTGGATGTACAATGTTTATA+TGG | - | chr3_1:84698648-84698667 | Msa0382210:CDS | 25.0% |
| ! | TTAGTAAAGCTACTGAAAAA+AGG | + | chr3_1:84698779-84698798 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTGATTTAGGGTT+TGG | + | chr3_1:84695288-84695307 | None:intergenic | 30.0% |
| !!! | GAACGATGTTTTGTTGATTT+AGG | + | chr3_1:84695294-84695313 | None:intergenic | 30.0% |
| !! | AGCATTGATTAATATACCTG+AGG | + | chr3_1:84695681-84695700 | None:intergenic | 30.0% |
| !! | AAAGAGTATCTATTTACCTG+AGG | + | chr3_1:84696006-84696025 | None:intergenic | 30.0% |
| TTGATGAGGTTAAATTGCAA+TGG | - | chr3_1:84696061-84696080 | Msa0382210:intron | 30.0% | |
| ! | ATGGTCTTTATTTCTCTCAA+AGG | - | chr3_1:84696565-84696584 | Msa0382210:CDS | 30.0% |
| TTACAGCACGTTTATAAACA+GGG | + | chr3_1:84696700-84696719 | None:intergenic | 30.0% | |
| !!! | AAGCTTATTGATTTTTCACC+TGG | - | chr3_1:84697073-84697092 | Msa0382210:intron | 30.0% |
| ATTTCACGAAAAGCTCAAAA+TGG | + | chr3_1:84697181-84697200 | None:intergenic | 30.0% | |
| AGAGAAAGAATGTTGTAGTT+AGG | + | chr3_1:84697208-84697227 | None:intergenic | 30.0% | |
| TACAACATTCTTTCTCTAGA+GGG | - | chr3_1:84697211-84697230 | Msa0382210:CDS | 30.0% | |
| !!! | TGCATTTTTTTCTTTGCAGA+TGG | - | chr3_1:84697424-84697443 | Msa0382210:intron | 30.0% |
| AAGATGATAAGTACTTTGCA+AGG | - | chr3_1:84697457-84697476 | Msa0382210:CDS | 30.0% | |
| CGTTGACAAAAAATCTTTGA+AGG | - | chr3_1:84697527-84697546 | Msa0382210:CDS | 30.0% | |
| GGAACAAACAATGAAATGAT+GGG | + | chr3_1:84697591-84697610 | None:intergenic | 30.0% | |
| AGGAACAAACAATGAAATGA+TGG | + | chr3_1:84697592-84697611 | None:intergenic | 30.0% | |
| ATAAGATCATTGCATTTGCT+TGG | - | chr3_1:84697993-84698012 | Msa0382210:intron | 30.0% | |
| TAAGATCATTGCATTTGCTT+GGG | - | chr3_1:84697994-84698013 | Msa0382210:intron | 30.0% | |
| !! | CATAGATTTGCTGTTATTCA+TGG | - | chr3_1:84698028-84698047 | Msa0382210:intron | 30.0% |
| AGATACTAATATCAGGCTTA+GGG | + | chr3_1:84698060-84698079 | None:intergenic | 30.0% | |
| TAGATACTAATATCAGGCTT+AGG | + | chr3_1:84698061-84698080 | None:intergenic | 30.0% | |
| AAAATGTTCAGTATTAGCCA+TGG | + | chr3_1:84698251-84698270 | None:intergenic | 30.0% | |
| TTTATGCAACTGATGTTGAA+TGG | - | chr3_1:84698269-84698288 | Msa0382210:intron | 30.0% | |
| TTATGCAACTGATGTTGAAT+GGG | - | chr3_1:84698270-84698289 | Msa0382210:intron | 30.0% | |
| TAGATAATATACCTTCCAGT+TGG | + | chr3_1:84698298-84698317 | None:intergenic | 30.0% | |
| AAGCAATATCAACACACATT+TGG | + | chr3_1:84698322-84698341 | None:intergenic | 30.0% | |
| GGATAACCAATATAAACATG+GGG | + | chr3_1:84698439-84698458 | None:intergenic | 30.0% | |
| AACATACCTGTCGTATAAAA+TGG | + | chr3_1:84698460-84698479 | None:intergenic | 30.0% | |
| TGTAACTTCAGTTCATGAAA+TGG | - | chr3_1:84698488-84698507 | Msa0382210:intron | 30.0% | |
| TCAGTTCATGAAATGGAAAA+TGG | - | chr3_1:84698495-84698514 | Msa0382210:intron | 30.0% | |
| TCAATGGCAAACATCTTTAT+CGG | - | chr3_1:84698535-84698554 | Msa0382210:intron | 30.0% | |
| ACATCTTTATCGGATATTGA+AGG | - | chr3_1:84698545-84698564 | Msa0382210:intron | 30.0% | |
| TACATCCAAAAGTCATTCTT+TGG | + | chr3_1:84698637-84698656 | None:intergenic | 30.0% | |
| ! | AAAACTTTTACAGCCAACAA+TGG | + | chr3_1:84698703-84698722 | None:intergenic | 30.0% |
| !! | AAAAAGGCTTTTGGAAACAA+GGG | + | chr3_1:84698763-84698782 | None:intergenic | 30.0% |
| !! | AAAAAAGGCTTTTGGAAACA+AGG | + | chr3_1:84698764-84698783 | None:intergenic | 30.0% |
| !!! | TACAGCAATTTTTGGTTTGT+GGG | + | chr3_1:84698816-84698835 | None:intergenic | 30.0% |
| !! | TTGTCCGATTATTGTTTTAC+AGG | - | chr3_1:84699501-84699520 | Msa0382210:five_prime_UTR | 30.0% |
| TAGGCCTGTAAAACAATAAT+CGG | + | chr3_1:84699508-84699527 | None:intergenic | 30.0% | |
| AATGGATATGTCTGTGGATT+GGG | + | chr3_1:84695254-84695273 | None:intergenic | 35.0% | |
| AAATGGATATGTCTGTGGAT+TGG | + | chr3_1:84695255-84695274 | None:intergenic | 35.0% | |
| AATCCACAGACATATCCATT+TGG | - | chr3_1:84695254-84695273 | Msa0382210:three_prime_UTR | 35.0% | |
| !! | TTTGTTGATTTAGGGTTTGG+AGG | + | chr3_1:84695285-84695304 | None:intergenic | 35.0% |
| GATGAAGAGAAGAGAATCTA+GGG | + | chr3_1:84695404-84695423 | None:intergenic | 35.0% | |
| AGATGAAGAGAAGAGAATCT+AGG | + | chr3_1:84695405-84695424 | None:intergenic | 35.0% | |
| TGACGATGATGTTATTCAAG+AGG | - | chr3_1:84695774-84695793 | Msa0382210:CDS | 35.0% | |
| TGTTATTCAAGAGGAGAATC+TGG | - | chr3_1:84695783-84695802 | Msa0382210:CDS | 35.0% | |
| !! | TCAGATTGGTGCTATTAAAG+AGG | - | chr3_1:84695909-84695928 | Msa0382210:intron | 35.0% |
| !! | ATTGGTGCTATTAAAGAGGA+TGG | - | chr3_1:84695913-84695932 | Msa0382210:intron | 35.0% |
| ! | TTTTCAGTAGAAGGATCAAC+AGG | + | chr3_1:84695949-84695968 | None:intergenic | 35.0% |
| ATTTAACCTCATCAAACCGA+TGG | + | chr3_1:84696056-84696075 | None:intergenic | 35.0% | |
| AGAGATATAATCATTACCCC+TGG | + | chr3_1:84696237-84696256 | None:intergenic | 35.0% | |
| ! | TCATTTGAGACCACCATATT+AGG | - | chr3_1:84696277-84696296 | Msa0382210:CDS | 35.0% |
| AGACCACCATATTAGGATTA+TGG | - | chr3_1:84696284-84696303 | Msa0382210:CDS | 35.0% | |
| GACCACCATATTAGGATTAT+GGG | - | chr3_1:84696285-84696304 | Msa0382210:CDS | 35.0% | |
| !! | AAGTGGTGCCTATTTGTTTT+TGG | + | chr3_1:84696332-84696351 | None:intergenic | 35.0% |
| ! | GGCAATTTCATGTTTTCTCA+TGG | - | chr3_1:84696396-84696415 | Msa0382210:intron | 35.0% |
| TTGTAATTCTACAAGGAGTG+TGG | + | chr3_1:84696423-84696442 | None:intergenic | 35.0% | |
| AACATAGTGATTGAACGTTG+GGG | + | chr3_1:84696471-84696490 | None:intergenic | 35.0% | |
| GAACATAGTGATTGAACGTT+GGG | + | chr3_1:84696472-84696491 | None:intergenic | 35.0% | |
| AGAACATAGTGATTGAACGT+TGG | + | chr3_1:84696473-84696492 | None:intergenic | 35.0% | |
| CAAAGGAAAATCTGCAACAA+TGG | - | chr3_1:84696582-84696601 | Msa0382210:CDS | 35.0% | |
| CTTACAGCACGTTTATAAAC+AGG | + | chr3_1:84696701-84696720 | None:intergenic | 35.0% | |
| ! | TTTTGTACAATGGTCACCTT+TGG | - | chr3_1:84696838-84696857 | Msa0382210:CDS | 35.0% |
| TTTGTACAATGGTCACCTTT+GGG | - | chr3_1:84696839-84696858 | Msa0382210:CDS | 35.0% | |
| CTACAACATTCTTTCTCTAG+AGG | - | chr3_1:84697210-84697229 | Msa0382210:CDS | 35.0% | |
| AACATATTTGATGTGAGGAC+TGG | - | chr3_1:84697242-84697261 | Msa0382210:CDS | 35.0% | |
| !!! | AGTGCTGATGATTTTGCTAT+CGG | - | chr3_1:84697290-84697309 | Msa0382210:CDS | 35.0% |
| AGAGAGATGTACTTGAAAAC+AGG | + | chr3_1:84697347-84697366 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTTTGCAGATGGAG+TGG | - | chr3_1:84697429-84697448 | Msa0382210:intron | 35.0% |
| TGATAAGTACTTTGCAAGGA+TGG | - | chr3_1:84697461-84697480 | Msa0382210:CDS | 35.0% | |
| GATAAGTACTTTGCAAGGAT+GGG | - | chr3_1:84697462-84697481 | Msa0382210:CDS | 35.0% | |
| ! | AATGAAATGATGGGATCAGT+TGG | + | chr3_1:84697582-84697601 | None:intergenic | 35.0% |
| AAACAGAAATTTACCCTAGC+AGG | + | chr3_1:84697636-84697655 | None:intergenic | 35.0% | |
| CATTACACATGACCATAGAA+GGG | + | chr3_1:84697664-84697683 | None:intergenic | 35.0% | |
| !! | TCTGTTCTTGATGGATTTGT+AGG | - | chr3_1:84697751-84697770 | Msa0382210:intron | 35.0% |
| AACGATCAACATTAACAGCA+AGG | + | chr3_1:84697874-84697893 | None:intergenic | 35.0% | |
| ! | GAATGTGCTTTTCTTTGTCT+TGG | + | chr3_1:84697900-84697919 | None:intergenic | 35.0% |
| ! | ACAAAGAAAAGCACATTCAC+AGG | - | chr3_1:84697902-84697921 | Msa0382210:CDS | 35.0% |
| ! | CTTTGAGCTTTTCCGTATAA+AGG | - | chr3_1:84697925-84697944 | Msa0382210:CDS | 35.0% |
| GTATGTCACGTTCCTTTATA+CGG | + | chr3_1:84697940-84697959 | None:intergenic | 35.0% | |
| TGACATACCTATTGAAGTTC+TGG | - | chr3_1:84697952-84697971 | Msa0382210:CDS | 35.0% | |
| ATTGTACTAGCAGGATTGAA+AGG | - | chr3_1:84698181-84698200 | Msa0382210:CDS | 35.0% | |
| ! | TGTGTTGATATTGCTTACCA+AGG | - | chr3_1:84698326-84698345 | Msa0382210:intron | 35.0% |
| TTATCCATGATCTTCAACCT+TGG | + | chr3_1:84698346-84698365 | None:intergenic | 35.0% | |
| ACTGATCCCCATGTTTATAT+TGG | - | chr3_1:84698430-84698449 | Msa0382210:intron | 35.0% | |
| ! | GGTTATCCATTTTATACGAC+AGG | - | chr3_1:84698451-84698470 | Msa0382210:intron | 35.0% |
| ATTGAAGGATCACTTCTTTC+AGG | - | chr3_1:84698560-84698579 | Msa0382210:CDS | 35.0% | |
| CTTTGGACCATTGTAATACA+CGG | + | chr3_1:84698620-84698639 | None:intergenic | 35.0% | |
| ! | ATGGTCCAAAGAATGACTTT+TGG | - | chr3_1:84698629-84698648 | Msa0382210:CDS | 35.0% |
| ! | AGCTACTGAAAAAAGGCTTT+TGG | + | chr3_1:84698772-84698791 | None:intergenic | 35.0% |
| !!! | GTACAGCAATTTTTGGTTTG+TGG | + | chr3_1:84698817-84698836 | None:intergenic | 35.0% |
| TAGGGTCTTGAAAGAAGATT+GGG | - | chr3_1:84699029-84699048 | Msa0382210:intron | 35.0% | |
| CATTGAAGTTGAGGAAATAG+TGG | - | chr3_1:84699161-84699180 | Msa0382210:CDS | 35.0% | |
| TAGTTATCCTAGTAGCTAGT+TGG | - | chr3_1:84699289-84699308 | Msa0382210:intron | 35.0% | |
| AGTTATCCTAGTAGCTAGTT+GGG | - | chr3_1:84699290-84699309 | Msa0382210:intron | 35.0% | |
| GTCTACAAAGATGAACACAA+AGG | + | chr3_1:84699322-84699341 | None:intergenic | 35.0% | |
| AACAGACTTGTGTCTGAAAA+GGG | + | chr3_1:84699430-84699449 | None:intergenic | 35.0% | |
| TAACAGACTTGTGTCTGAAA+AGG | + | chr3_1:84699431-84699450 | None:intergenic | 35.0% | |
| CTAGCATTTAAGTGCTAAGA+TGG | + | chr3_1:84699469-84699488 | None:intergenic | 35.0% | |
| TTTACAGGCCTATGTTATCA+TGG | - | chr3_1:84699516-84699535 | Msa0382210:five_prime_UTR | 35.0% | |
| ACCATAGTCCATGATAACAT+AGG | + | chr3_1:84699527-84699546 | None:intergenic | 35.0% | |
| CTTCCAAATGGATATGTCTG+TGG | + | chr3_1:84695260-84695279 | None:intergenic | 40.0% | |
| GAAGACAAAGCTTTGCTTCT+CGG | - | chr3_1:84695592-84695611 | Msa0382210:CDS | 40.0% | |
| AATGGAATCGAGATCGATAG+AGG | + | chr3_1:84695629-84695648 | None:intergenic | 40.0% | |
| ! | GAGAATCTGGAGTTTGATTC+TGG | - | chr3_1:84695796-84695815 | Msa0382210:CDS | 40.0% |
| CTGGAGTTTGATTCTGGATT+TGG | - | chr3_1:84695802-84695821 | Msa0382210:CDS | 40.0% | |
| TAATCTACCTGTTGTTCCCA+AGG | - | chr3_1:84695843-84695862 | Msa0382210:CDS | 40.0% | |
| AATTTCTCCTTGGGAACAAC+AGG | + | chr3_1:84695853-84695872 | None:intergenic | 40.0% | |
| AGCTTCTCGAATTTCTCCTT+GGG | + | chr3_1:84695862-84695881 | None:intergenic | 40.0% | |
| AAGCTTCTCGAATTTCTCCT+TGG | + | chr3_1:84695863-84695882 | None:intergenic | 40.0% | |
| CTATTAAAGAGGATGGTCTC+TGG | - | chr3_1:84695920-84695939 | Msa0382210:intron | 40.0% | |
| TCCTTCTACTGAAAAGTCCT+TGG | - | chr3_1:84695954-84695973 | Msa0382210:intron | 40.0% | |
| CCTTCTACTGAAAAGTCCTT+GGG | - | chr3_1:84695955-84695974 | Msa0382210:intron | 40.0% | |
| CATTGAGTACAATACTCCTC+AGG | - | chr3_1:84695987-84696006 | Msa0382210:intron | 40.0% | |
| !!! | GTTTTACCATCGGTTTGATG+AGG | - | chr3_1:84696047-84696066 | Msa0382210:intron | 40.0% |
| CTTGCTAAAGAGAAGACTCA+AGG | - | chr3_1:84696102-84696121 | Msa0382210:intron | 40.0% | |
| GAAGACTCAAGGATACAAAC+TGG | - | chr3_1:84696113-84696132 | Msa0382210:intron | 40.0% | |
| CAAACAAGGAATATGCTCCA+GGG | - | chr3_1:84696217-84696236 | Msa0382210:CDS | 40.0% | |
| AAACAAGGAATATGCTCCAG+GGG | - | chr3_1:84696218-84696237 | Msa0382210:CDS | 40.0% | |
| CTCCCATAATCCTAATATGG+TGG | + | chr3_1:84696290-84696309 | None:intergenic | 40.0% | |
| GGTCTCCCATAATCCTAATA+TGG | + | chr3_1:84696293-84696312 | None:intergenic | 40.0% | |
| ACAATGGCTTACTGATGCTA+AGG | - | chr3_1:84696598-84696617 | Msa0382210:CDS | 40.0% | |
| ! | GTTCAGATACTGAGGTTTTG+TGG | - | chr3_1:84696648-84696667 | Msa0382210:CDS | 40.0% |
| AGCACGTTTATAAACAGGGT+CGG | + | chr3_1:84696696-84696715 | None:intergenic | 40.0% | |
| !! | TTCACCTGGTGAGAAGTATT+TGG | - | chr3_1:84697087-84697106 | Msa0382210:intron | 40.0% |
| GTTACCAAATACTTCTCACC+AGG | + | chr3_1:84697094-84697113 | None:intergenic | 40.0% | |
| TCATTGTTTGTTCCTGAGAC+AGG | - | chr3_1:84697597-84697616 | Msa0382210:intron | 40.0% | |
| ! | TCTGTTTTCCTTCCCTTCTA+TGG | - | chr3_1:84697649-84697668 | Msa0382210:CDS | 40.0% |
| CCATTACACATGACCATAGA+AGG | + | chr3_1:84697665-84697684 | None:intergenic | 40.0% | |
| CCTTCTATGGTCATGTGTAA+TGG | - | chr3_1:84697662-84697681 | Msa0382210:CDS | 40.0% | |
| ACAGCAAATCTATGTCCCTT+TGG | + | chr3_1:84698022-84698041 | None:intergenic | 40.0% | |
| TAGTATCTACTCTATGCGGA+CGG | - | chr3_1:84698072-84698091 | Msa0382210:intron | 40.0% | |
| !! | GAGTAGTGAGCTTTGAAACT+CGG | + | chr3_1:84698111-84698130 | None:intergenic | 40.0% |
| TCAAAGCTCACTACTCTGAA+AGG | - | chr3_1:84698115-84698134 | Msa0382210:CDS | 40.0% | |
| !!! | AGCAGGCAAATGCTTTGTTT+TGG | - | chr3_1:84698140-84698159 | Msa0382210:CDS | 40.0% |
| GCAGGATTGAAAGGTTTCAA+TGG | - | chr3_1:84698190-84698209 | Msa0382210:CDS | 40.0% | |
| !! | GAAAGGTTTCAATGGACTGT+TGG | - | chr3_1:84698198-84698217 | Msa0382210:intron | 40.0% |
| ! | TGTTGATGAGCTTGAAACCA+TGG | - | chr3_1:84698231-84698250 | Msa0382210:intron | 40.0% |
| CTTACCAAGGTTGAAGATCA+TGG | - | chr3_1:84698339-84698358 | Msa0382210:intron | 40.0% | |
| TGGGATTGTGAATCCATTGT+TGG | - | chr3_1:84698687-84698706 | Msa0382210:intron | 40.0% | |
| TCAGCAGCAATGAAACATCT+TGG | + | chr3_1:84698987-84699006 | None:intergenic | 40.0% | |
| GTAGGGTCTTGAAAGAAGAT+TGG | - | chr3_1:84699028-84699047 | Msa0382210:intron | 40.0% | |
| TGAAAGAAGATTGGGACAAG+TGG | - | chr3_1:84699037-84699056 | Msa0382210:intron | 40.0% | |
| GAAAGAAGATTGGGACAAGT+GGG | - | chr3_1:84699038-84699057 | Msa0382210:intron | 40.0% | |
| ATGCAACAGCTTCCATTCAT+TGG | + | chr3_1:84699064-84699083 | None:intergenic | 40.0% | |
| ATGAAGAAGAGAAGCTAGAG+AGG | - | chr3_1:84699082-84699101 | Msa0382210:intron | 40.0% | |
| TGAAGAAGAGAAGCTAGAGA+GGG | - | chr3_1:84699083-84699102 | Msa0382210:intron | 40.0% | |
| TTCCTCAACTTCAATGTCCT+TGG | + | chr3_1:84699157-84699176 | None:intergenic | 40.0% | |
| CTCAACTTGAAGGATCTCTT+TGG | + | chr3_1:84699193-84699212 | None:intergenic | 40.0% | |
| !! | CAAAGAGATCCTTCAAGTTG+AGG | - | chr3_1:84699191-84699210 | Msa0382210:CDS | 40.0% |
| GCTAATACTCCTCAACTTGA+AGG | + | chr3_1:84699203-84699222 | None:intergenic | 40.0% | |
| !! | TAGCCATGTTTTCAAGAGTG+AGG | - | chr3_1:84699219-84699238 | Msa0382210:exon | 40.0% |
| GTATGTAACTGGCTAGTAGA+TGG | - | chr3_1:84699249-84699268 | Msa0382210:five_prime_UTR | 40.0% | |
| ! | GCCTATGTTATCATGGACTA+TGG | - | chr3_1:84699523-84699542 | Msa0382210:five_prime_UTR | 40.0% |
| !! | ATATGTCTGTGGATTGGGCT+CGG | + | chr3_1:84695249-84695268 | None:intergenic | 45.0% |
| ATCGGTAGAGTTCAGTGCAA+CGG | + | chr3_1:84695330-84695349 | None:intergenic | 45.0% | |
| CAGCCAGGTTTAGTTGTTGA+CGG | + | chr3_1:84695358-84695377 | None:intergenic | 45.0% | |
| TTAGCGTTGTCGCAGTGAAA+TGG | + | chr3_1:84695506-84695525 | None:intergenic | 45.0% | |
| GCGACAACGCTAAAGCTTTA+CGG | - | chr3_1:84695513-84695532 | Msa0382210:three_prime_UTR | 45.0% | |
| ATTGCGGTGGTGAGTGATTA+TGG | + | chr3_1:84695541-84695560 | None:intergenic | 45.0% | |
| CATTACATCCGCCATGATTG+CGG | + | chr3_1:84695557-84695576 | None:intergenic | 45.0% | |
| ! | CCCAAGGACTTTTCAGTAGA+AGG | + | chr3_1:84695958-84695977 | None:intergenic | 45.0% |
| CTCAATGAAGCAGTAACCCA+AGG | + | chr3_1:84695974-84695993 | None:intergenic | 45.0% | |
| ! | GCATATTCCTTGTTTGGAGG+AGG | + | chr3_1:84696213-84696232 | None:intergenic | 45.0% |
| ! | GGAGCATATTCCTTGTTTGG+AGG | + | chr3_1:84696216-84696235 | None:intergenic | 45.0% |
| CCTGGAGCATATTCCTTGTT+TGG | + | chr3_1:84696219-84696238 | None:intergenic | 45.0% | |
| CCAAACAAGGAATATGCTCC+AGG | - | chr3_1:84696216-84696235 | Msa0382210:CDS | 45.0% | |
| AACCAGCACGAATCACAAAC+TGG | + | chr3_1:84696631-84696650 | None:intergenic | 45.0% | |
| GCACGTTTATAAACAGGGTC+GGG | + | chr3_1:84696695-84696714 | None:intergenic | 45.0% | |
| !! | GGACGGAGAGTTTTGTACAA+TGG | - | chr3_1:84696828-84696847 | Msa0382210:CDS | 45.0% |
| GTCACCTTTGGGTACTTACT+TGG | - | chr3_1:84696850-84696869 | Msa0382210:CDS | 45.0% | |
| GTTGCCAAGTAAGTACCCAA+AGG | + | chr3_1:84696857-84696876 | None:intergenic | 45.0% | |
| GTAACGCATGAGACGATTGA+AGG | + | chr3_1:84696921-84696940 | None:intergenic | 45.0% | |
| TTAGCATCTCGAGGATTGCT+TGG | + | chr3_1:84697133-84697152 | None:intergenic | 45.0% | |
| ACACTCACATTAGCATCTCG+AGG | + | chr3_1:84697142-84697161 | None:intergenic | 45.0% | |
| !! | GCTGATGATTTTGCTATCGG+AGG | - | chr3_1:84697293-84697312 | Msa0382210:CDS | 45.0% |
| !! | GATTTTGCTATCGGAGGTAC+TGG | - | chr3_1:84697299-84697318 | Msa0382210:CDS | 45.0% |
| TTTCTTTGCAGATGGAGTGG+TGG | - | chr3_1:84697432-84697451 | Msa0382210:intron | 45.0% | |
| TTGTTTGTTCCTGAGACAGG+AGG | - | chr3_1:84697600-84697619 | Msa0382210:intron | 45.0% | |
| AGAAATTTACCCTAGCAGGC+TGG | + | chr3_1:84697632-84697651 | None:intergenic | 45.0% | |
| ACACATGACCATAGAAGGGA+AGG | + | chr3_1:84697660-84697679 | None:intergenic | 45.0% | |
| TGCCTGAGTTCTTCTTTGCT+GGG | + | chr3_1:84697794-84697813 | None:intergenic | 45.0% | |
| TTGCCTGAGTTCTTCTTTGC+TGG | + | chr3_1:84697795-84697814 | None:intergenic | 45.0% | |
| TCAGTGACTGCAAGATGTAC+TGG | - | chr3_1:84697831-84697850 | Msa0382210:intron | 45.0% | |
| ! | AAGATGTACTGGCAGAGCAA+TGG | - | chr3_1:84697842-84697861 | Msa0382210:intron | 45.0% |
| TCGAGCTCCAGAACTTCAAT+AGG | + | chr3_1:84697962-84697981 | None:intergenic | 45.0% | |
| GATGTTGAATGGGATCCAAC+TGG | - | chr3_1:84698280-84698299 | Msa0382210:intron | 45.0% | |
| TTGAATGGGATCCAACTGGA+AGG | - | chr3_1:84698284-84698303 | Msa0382210:intron | 45.0% | |
| CTTCTCAGCAGTCAAGAAAG+AGG | + | chr3_1:84698908-84698927 | None:intergenic | 45.0% | |
| CTCTTTCTTGACTGCTGAGA+AGG | - | chr3_1:84698906-84698925 | Msa0382210:CDS | 45.0% | |
| TTTCTTGACTGCTGAGAAGG+AGG | - | chr3_1:84698909-84698928 | Msa0382210:CDS | 45.0% | |
| AGCTAGAGAGGGAAAATCTG+AGG | - | chr3_1:84699094-84699113 | Msa0382210:intron | 45.0% | |
| GCTAGAGAGGGAAAATCTGA+GGG | - | chr3_1:84699095-84699114 | Msa0382210:intron | 45.0% | |
| AGAAGCTAGTGATGAGGAAG+AGG | - | chr3_1:84699122-84699141 | Msa0382210:CDS | 45.0% | |
| GGAAGAGGAATATGAAGCCA+AGG | - | chr3_1:84699137-84699156 | Msa0382210:CDS | 45.0% | |
| AGCCAAGGACATTGAAGTTG+AGG | - | chr3_1:84699152-84699171 | Msa0382210:CDS | 45.0% | |
| TCGCCTCACTCTTGAAAACA+TGG | + | chr3_1:84699225-84699244 | None:intergenic | 45.0% | |
| ! | GAGGCGAAGAAGTATGTAAC+TGG | - | chr3_1:84699238-84699257 | Msa0382210:five_prime_UTR | 45.0% |
| GGTTTGGAGGCTCTTCCAAA+TGG | + | chr3_1:84695272-84695291 | None:intergenic | 50.0% | |
| TAGTTGTTGACGGCGGCAAT+CGG | + | chr3_1:84695348-84695367 | None:intergenic | 50.0% | |
| CCAGGTTTAGTTGTTGACGG+CGG | + | chr3_1:84695355-84695374 | None:intergenic | 50.0% | |
| GGATTCTTACCGCTTACCGA+CGG | + | chr3_1:84695383-84695402 | None:intergenic | 50.0% | |
| ATCACTCACCACCGCAATCA+TGG | - | chr3_1:84695543-84695562 | Msa0382210:three_prime_UTR | 50.0% | |
| GATTCCATTCACCTTCCTCC+AGG | - | chr3_1:84695640-84695659 | Msa0382210:CDS | 50.0% | |
| !! | TCATGAAAGTGCCAGACGAG+TGG | - | chr3_1:84696184-84696203 | Msa0382210:intron | 50.0% |
| !! | CATGAAAGTGCCAGACGAGT+GGG | - | chr3_1:84696185-84696204 | Msa0382210:intron | 50.0% |
| ACAACCAAGTAGCACGCAAG+TGG | + | chr3_1:84696349-84696368 | None:intergenic | 50.0% | |
| GACCAGTTTGTGATTCGTGC+TGG | - | chr3_1:84696626-84696645 | Msa0382210:CDS | 50.0% | |
| !! | TCGTGCTGGTTCAGATACTG+AGG | - | chr3_1:84696640-84696659 | Msa0382210:CDS | 50.0% |
| TTGGCAACAGTTCACCGTCA+GGG | - | chr3_1:84696869-84696888 | Msa0382210:CDS | 50.0% | |
| ACGCATGAGACGATTGAAGG+TGG | + | chr3_1:84696918-84696937 | None:intergenic | 50.0% | |
| CTCGAGGATTGCTTGGTTCA+TGG | + | chr3_1:84697126-84697145 | None:intergenic | 50.0% | |
| !! | TTTGCTATCGGAGGTACTGG+AGG | - | chr3_1:84697302-84697321 | Msa0382210:CDS | 50.0% |
| TTTGTTCCTGAGACAGGAGG+TGG | - | chr3_1:84697603-84697622 | Msa0382210:intron | 50.0% | |
| TCCCCAGCAAAGAAGAACTC+AGG | - | chr3_1:84697789-84697808 | Msa0382210:intron | 50.0% | |
| GCCTGAGTTCTTCTTTGCTG+GGG | + | chr3_1:84697793-84697812 | None:intergenic | 50.0% | |
| TGCATTTGCTTGGGAGCCAA+AGG | - | chr3_1:84698003-84698022 | Msa0382210:intron | 50.0% | |
| GCATTTGCTTGGGAGCCAAA+GGG | - | chr3_1:84698004-84698023 | Msa0382210:intron | 50.0% | |
| ! | CACTACTCTGAAAGGCAAGC+AGG | - | chr3_1:84698123-84698142 | Msa0382210:CDS | 50.0% |
| !!! | GCTTTGTTTTGGTCACCAGC+AGG | - | chr3_1:84698151-84698170 | Msa0382210:CDS | 50.0% |
| AGTACAATGAAGCGACCTGC+TGG | + | chr3_1:84698169-84698188 | None:intergenic | 50.0% | |
| GGTCGCTTCATTGTACTAGC+AGG | - | chr3_1:84698172-84698191 | Msa0382210:CDS | 50.0% | |
| !! | GTCAAGAAAGAGGCTGGTCT+GGG | + | chr3_1:84698898-84698917 | None:intergenic | 50.0% |
| ! | AGTCAAGAAAGAGGCTGGTC+TGG | + | chr3_1:84698899-84698918 | None:intergenic | 50.0% |
| TCAGCAGTCAAGAAAGAGGC+TGG | + | chr3_1:84698904-84698923 | None:intergenic | 50.0% | |
| ! | AACAAGAGCGTGAGAAGCGT+AGG | - | chr3_1:84699010-84699029 | Msa0382210:intron | 50.0% |
| ! | ACAAGAGCGTGAGAAGCGTA+GGG | - | chr3_1:84699011-84699030 | Msa0382210:intron | 50.0% |
| GAGAGGGAAAATCTGAGGGA+CGG | - | chr3_1:84699099-84699118 | Msa0382210:intron | 50.0% | |
| ACACTGCCCAACTAGCTACT+AGG | + | chr3_1:84699299-84699318 | None:intergenic | 50.0% | |
| ! | TCAGTGCAACGGAAGCGCAA+GGG | + | chr3_1:84695319-84695338 | None:intergenic | 55.0% |
| ! | TTCAGTGCAACGGAAGCGCA+AGG | + | chr3_1:84695320-84695339 | None:intergenic | 55.0% |
| CCGCCGTCAACAACTAAACC+TGG | - | chr3_1:84695352-84695371 | Msa0382210:three_prime_UTR | 55.0% | |
| ACTAAACCTGGCTGTGCCGT+CGG | - | chr3_1:84695364-84695383 | Msa0382210:three_prime_UTR | 55.0% | |
| ACTCACCACCGCAATCATGG+CGG | - | chr3_1:84695546-84695565 | Msa0382210:three_prime_UTR | 55.0% | |
| TACATCCGCCATGATTGCGG+TGG | + | chr3_1:84695554-84695573 | None:intergenic | 55.0% | |
| GTCACCTGGAGGAAGGTGAA+TGG | + | chr3_1:84695647-84695666 | None:intergenic | 55.0% | |
| CTTCCTCCAGGTGACAACTG+CGG | - | chr3_1:84695652-84695671 | Msa0382210:CDS | 55.0% | |
| ATTCCGCAGTTGTCACCTGG+AGG | + | chr3_1:84695658-84695677 | None:intergenic | 55.0% | |
| AGGATTCCGCAGTTGTCACC+TGG | + | chr3_1:84695661-84695680 | None:intergenic | 55.0% | |
| GTGACAACTGCGGAATCCTC+AGG | - | chr3_1:84695662-84695681 | Msa0382210:CDS | 55.0% | |
| CTTGGCAACAGTTCACCGTC+AGG | - | chr3_1:84696868-84696887 | Msa0382210:CDS | 55.0% | |
| TGGCAACAGTTCACCGTCAG+GGG | - | chr3_1:84696870-84696889 | Msa0382210:CDS | 55.0% | |
| CATGCGTTACGCACATCCTC+AGG | - | chr3_1:84696931-84696950 | Msa0382210:CDS | 55.0% | |
| !! | GAGGTGTCACTGGAGTGTCA+TGG | - | chr3_1:84697321-84697340 | Msa0382210:CDS | 55.0% |
| TGGTTACCACCTCCTGTCTC+AGG | + | chr3_1:84697612-84697631 | None:intergenic | 55.0% | |
| AGGTGGTAACCAGCCTGCTA+GGG | - | chr3_1:84697620-84697639 | Msa0382210:intron | 55.0% | |
| GGGACAAGTGGGCCAATGAA+TGG | - | chr3_1:84699049-84699068 | Msa0382210:intron | 55.0% | |
| GGACGGAGAAGCTAGTGATG+AGG | - | chr3_1:84699116-84699135 | Msa0382210:CDS | 55.0% | |
| ! | CAGTGCAACGGAAGCGCAAG+GGG | + | chr3_1:84695318-84695337 | None:intergenic | 60.0% |
| CGCAGTTGTCACCTGGAGGA+AGG | + | chr3_1:84695654-84695673 | None:intergenic | 60.0% | |
| GTGGGCTCCTCCTCCAAACA+AGG | - | chr3_1:84696203-84696222 | Msa0382210:intron | 60.0% | |
| ! | GGCACCACTTGCGTGCTACT+TGG | - | chr3_1:84696342-84696361 | Msa0382210:intron | 60.0% |
| GGCAACAGTTCACCGTCAGG+GGG | - | chr3_1:84696871-84696890 | Msa0382210:CDS | 60.0% | |
| !! | GGAGGTACTGGAGGTGTCAC+TGG | - | chr3_1:84697311-84697330 | Msa0382210:CDS | 60.0% |
| GAGGTGGTAACCAGCCTGCT+AGG | - | chr3_1:84697619-84697638 | Msa0382210:intron | 60.0% | |
| ATGCGGACGGCTCAGAACAC+TGG | - | chr3_1:84698085-84698104 | Msa0382210:CDS | 60.0% | |
| CTGGCTGTGCCGTCGGTAAG+CGG | - | chr3_1:84695371-84695390 | Msa0382210:three_prime_UTR | 65.0% | |
| ACCGTCAGGGGGCAGCAGTT+TGG | - | chr3_1:84696882-84696901 | Msa0382210:CDS | 65.0% | |
| CCCAAACTGCTGCCCCCTGA+CGG | + | chr3_1:84696886-84696905 | None:intergenic | 65.0% | |
| CCGTCAGGGGGCAGCAGTTT+GGG | - | chr3_1:84696883-84696902 | Msa0382210:CDS | 65.0% | |
| CGTCAGGGGGCAGCAGTTTG+GGG | - | chr3_1:84696884-84696903 | Msa0382210:CDS | 65.0% | |
| CGCTTACCGACGGCACAGCC+AGG | + | chr3_1:84695373-84695392 | None:intergenic | 70.0% | |
| GGAGGAGGAGCCCACTCGTC+TGG | + | chr3_1:84696198-84696217 | None:intergenic | 70.0% | |
| CAGGGGGCAGCAGTTTGGGG+AGG | - | chr3_1:84696887-84696906 | Msa0382210:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 84695246 | 84699551 | 84695246 | ID=Msa0382210;Name=Msa0382210 |
| chr3_1 | mRNA | 84695246 | 84699551 | 84695246 | ID=Msa0382210-mRNA-1;Parent=Msa0382210;Name=Msa0382210-mRNA-1;_AED=0.07;_eAED=0.07;_QI=209|1|1|1|0.90|0.83|12|330|717 |
| chr3_1 | exon | 84695246 | 84695914 | 84695246 | ID=Msa0382210-mRNA-1:exon:22137;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84696216 | 84696324 | 84696216 | ID=Msa0382210-mRNA-1:exon:22136;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84696492 | 84697024 | 84696492 | ID=Msa0382210-mRNA-1:exon:22135;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84697156 | 84697354 | 84697156 | ID=Msa0382210-mRNA-1:exon:22134;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84697443 | 84697567 | 84697443 | ID=Msa0382210-mRNA-1:exon:22133;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84697644 | 84697727 | 84697644 | ID=Msa0382210-mRNA-1:exon:22132;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84697845 | 84697973 | 84697845 | ID=Msa0382210-mRNA-1:exon:22131;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84698082 | 84698210 | 84698082 | ID=Msa0382210-mRNA-1:exon:22130;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84698558 | 84698704 | 84698558 | ID=Msa0382210-mRNA-1:exon:22129;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84698789 | 84699026 | 84698789 | ID=Msa0382210-mRNA-1:exon:22128;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84699114 | 84699297 | 84699114 | ID=Msa0382210-mRNA-1:exon:22127;Parent=Msa0382210-mRNA-1 |
| chr3_1 | exon | 84699405 | 84699551 | 84699405 | ID=Msa0382210-mRNA-1:exon:22126;Parent=Msa0382210-mRNA-1 |
| chr3_1 | five_prime_UTR | 84699405 | 84699551 | 84699405 | ID=Msa0382210-mRNA-1:five_prime_utr;Parent=Msa0382210-mRNA-1 |
| chr3_1 | five_prime_UTR | 84699236 | 84699297 | 84699236 | ID=Msa0382210-mRNA-1:five_prime_utr;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84699114 | 84699235 | 84699114 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84698789 | 84699026 | 84698789 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84698558 | 84698704 | 84698558 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84698082 | 84698210 | 84698082 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84697845 | 84697973 | 84697845 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84697644 | 84697727 | 84697644 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84697443 | 84697567 | 84697443 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84697156 | 84697354 | 84697156 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84696492 | 84697024 | 84696492 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84696216 | 84696324 | 84696216 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | CDS | 84695576 | 84695914 | 84695576 | ID=Msa0382210-mRNA-1:cds;Parent=Msa0382210-mRNA-1 |
| chr3_1 | three_prime_UTR | 84695246 | 84695575 | 84695246 | ID=Msa0382210-mRNA-1:three_prime_utr;Parent=Msa0382210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
