Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039520 | XP_004494584.2 | 98.387 | 124 | 2 | 0 | 1 | 124 | 61 | 184 | 6.06e-83 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039520 | sp|Q9M9W1|RL222_ARATH | 87.903 | 124 | 15 | 0 | 1 | 124 | 1 | 124 | 1.81e-66 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039520 | A0A1S2XU70 | 98.387 | 124 | 2 | 0 | 1 | 124 | 61 | 184 | 2.90e-83 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1039520 | 0.817084 | 3.961225e-52 | -8.615850e-47 |
| Msa0002790 | Msa1039520 | 0.829655 | 4.559595e-55 | -8.615850e-47 |
| Msa0022970 | Msa1039520 | 0.847583 | 1.054981e-59 | -8.615850e-47 |
| Msa0032780 | Msa1039520 | 0.827569 | 1.455218e-54 | -8.615850e-47 |
| Msa0032810 | Msa1039520 | 0.808510 | 2.989931e-50 | -8.615850e-47 |
| Msa0045730 | Msa1039520 | 0.841467 | 4.668583e-58 | -8.615850e-47 |
| Msa0046830 | Msa1039520 | 0.826165 | 3.151206e-54 | -8.615850e-47 |
| Msa0047160 | Msa1039520 | 0.805871 | 1.082640e-49 | -8.615850e-47 |
| Msa0048180 | Msa1039520 | 0.819558 | 1.090686e-52 | -8.615850e-47 |
| Msa0049690 | Msa1039520 | 0.805632 | 1.215602e-49 | -8.615850e-47 |
| Msa0074030 | Msa1039520 | 0.817223 | 3.687078e-52 | -8.615850e-47 |
| Msa0077530 | Msa1039520 | 0.800363 | 1.492464e-48 | -8.615850e-47 |
| Msa0116130 | Msa1039520 | 0.844322 | 8.121216e-59 | -8.615850e-47 |
| Msa0116670 | Msa1039520 | 0.852829 | 3.571288e-61 | -8.615850e-47 |
| Msa0118710 | Msa1039520 | 0.818337 | 2.065968e-52 | -8.615850e-47 |
| Msa0603320 | Msa1039520 | 0.812082 | 5.071257e-51 | -8.615850e-47 |
| Msa0615580 | Msa1039520 | 0.845963 | 2.924784e-59 | -8.615850e-47 |
| Msa0622750 | Msa1039520 | 0.835846 | 1.322750e-56 | -8.615850e-47 |
| Msa0623200 | Msa1039520 | 0.857943 | 1.156119e-62 | -8.615850e-47 |
| Msa0625570 | Msa1039520 | 0.807384 | 5.190444e-50 | -8.615850e-47 |
| Msa0631250 | Msa1039520 | 0.838635 | 2.558558e-57 | -8.615850e-47 |
| Msa0666230 | Msa1039520 | 0.832972 | 6.966277e-56 | -8.615850e-47 |
| Msa0695450 | Msa1039520 | 0.855707 | 5.267662e-62 | -8.615850e-47 |
| Msa0698780 | Msa1039520 | 0.859193 | 4.900054e-63 | -8.615850e-47 |
| Msa0705800 | Msa1039520 | 0.829646 | 4.582169e-55 | -8.615850e-47 |
| Msa0706500 | Msa1039520 | 0.806516 | 7.920329e-50 | -8.615850e-47 |
| Msa0712610 | Msa1039520 | 0.832287 | 1.030330e-55 | -8.615850e-47 |
| Msa0729200 | Msa1039520 | 0.876423 | 1.412688e-68 | -8.615850e-47 |
| Msa0766080 | Msa1039520 | 0.877176 | 7.748287e-69 | -8.615850e-47 |
| Msa0769590 | Msa1039520 | 0.875523 | 2.881973e-68 | -8.615850e-47 |
| Msa0781080 | Msa1039520 | 0.812253 | 4.653378e-51 | -8.615850e-47 |
| Msa0783630 | Msa1039520 | 0.809793 | 1.587378e-50 | -8.615850e-47 |
| Msa0785130 | Msa1039520 | 0.861045 | 1.351209e-63 | -8.615850e-47 |
| Msa0806880 | Msa1039520 | 0.872364 | 3.365897e-67 | -8.615850e-47 |
| Msa0817540 | Msa1039520 | 0.826845 | 2.169435e-54 | -8.615850e-47 |
| Msa0133540 | Msa1039520 | 0.824912 | 6.242760e-54 | -8.615850e-47 |
| Msa0138890 | Msa1039520 | 0.801080 | 1.065814e-48 | -8.615850e-47 |
| Msa0146340 | Msa1039520 | 0.803828 | 2.893074e-49 | -8.615850e-47 |
| Msa0172270 | Msa1039520 | 0.869217 | 3.654004e-66 | -8.615850e-47 |
| Msa0173530 | Msa1039520 | 0.849929 | 2.357631e-60 | -8.615850e-47 |
| Msa0180020 | Msa1039520 | 0.804263 | 2.349238e-49 | -8.615850e-47 |
| Msa0181490 | Msa1039520 | 0.813079 | 3.069041e-51 | -8.615850e-47 |
| Msa0187930 | Msa1039520 | 0.815863 | 7.432006e-52 | -8.615850e-47 |
| Msa0194540 | Msa1039520 | 0.806169 | 9.373629e-50 | -8.615850e-47 |
| Msa0202020 | Msa1039520 | 0.862052 | 6.659322e-64 | -8.615850e-47 |
| Msa0210330 | Msa1039520 | 0.806817 | 6.841151e-50 | -8.615850e-47 |
| Msa0215390 | Msa1039520 | 0.810311 | 1.227943e-50 | -8.615850e-47 |
| Msa0218720 | Msa1039520 | 0.804193 | 2.428937e-49 | -8.615850e-47 |
| Msa0218830 | Msa1039520 | 0.860162 | 2.502323e-63 | -8.615850e-47 |
| Msa0219120 | Msa1039520 | 0.831485 | 1.625682e-55 | -8.615850e-47 |
| Msa0221030 | Msa1039520 | 0.843859 | 1.081324e-58 | -8.615850e-47 |
| Msa0230490 | Msa1039520 | 0.864333 | 1.311714e-64 | -8.615850e-47 |
| Msa0230520 | Msa1039520 | 0.807897 | 4.039178e-50 | -8.615850e-47 |
| Msa0382210 | Msa1039520 | 0.808370 | 3.202502e-50 | -8.615850e-47 |
| Msa0423750 | Msa1039520 | 0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0443390 | Msa1039520 | 0.850625 | 1.504932e-60 | -8.615850e-47 |
| Msa0481850 | Msa1039520 | 0.805643 | 1.208961e-49 | -8.615850e-47 |
| Msa1019240 | Msa1039520 | 0.838420 | 2.905759e-57 | -8.615850e-47 |
| Msa1019260 | Msa1039520 | 0.826021 | 3.408898e-54 | -8.615850e-47 |
| Msa1021120 | Msa1039520 | 0.814474 | 1.512297e-51 | -8.615850e-47 |
| Msa1039520 | Msa1072710 | 0.859005 | 5.577314e-63 | -8.615850e-47 |
| Msa1039520 | Msa1078870 | 0.803287 | 3.746891e-49 | -8.615850e-47 |
| Msa1039520 | Msa1080350 | 0.831109 | 2.010633e-55 | -8.615850e-47 |
| Msa1039520 | Msa1088490 | 0.820331 | 7.258119e-53 | -8.615850e-47 |
| Msa1039520 | Msa1094380 | 0.802095 | 6.599765e-49 | -8.615850e-47 |
| Msa1039520 | Msa1096900 | 0.804671 | 1.931632e-49 | -8.615850e-47 |
| Msa1039520 | Msa1104210 | 0.824126 | 9.558035e-54 | -8.615850e-47 |
| Msa1039520 | Msa1123830 | 0.810122 | 1.348690e-50 | -8.615850e-47 |
| Msa1039520 | Msa1125860 | 0.827515 | 1.499425e-54 | -8.615850e-47 |
| Msa1039520 | Msa1126060 | 0.825373 | 4.857815e-54 | -8.615850e-47 |
| Msa1039520 | Msa1126470 | 0.807753 | 4.333686e-50 | -8.615850e-47 |
| Msa1039520 | Msa1135890 | 0.801565 | 8.480161e-49 | -8.615850e-47 |
| Msa1039520 | Msa1143510 | 0.803715 | 3.054153e-49 | -8.615850e-47 |
| Msa1039520 | Msa1165780 | 0.807103 | 5.952648e-50 | -8.615850e-47 |
| Msa1039520 | Msa1166870 | 0.815507 | 8.923611e-52 | -8.615850e-47 |
| Msa1039520 | Msa1208020 | 0.827052 | 1.935997e-54 | -8.615850e-47 |
| Msa1039520 | Msa1215820 | 0.817283 | 3.574098e-52 | -8.615850e-47 |
| Msa1039520 | Msa1230580 | 0.813620 | 2.334474e-51 | -8.615850e-47 |
| Msa1039520 | Msa1260530 | 0.821926 | 3.113925e-53 | -8.615850e-47 |
| Msa1039520 | Msa1262890 | 0.810466 | 1.136953e-50 | -8.615850e-47 |
| Msa1039520 | Msa1265630 | 0.806089 | 9.743740e-50 | -8.615850e-47 |
| Msa1039520 | Msa1266060 | 0.820270 | 7.493456e-53 | -8.615850e-47 |
| Msa1039520 | Msa1273340 | 0.826424 | 2.733446e-54 | -8.615850e-47 |
| Msa1039520 | Msa1275680 | 0.804012 | 2.649391e-49 | -8.615850e-47 |
| Msa1039520 | Msa1299590 | 0.846349 | 2.297118e-59 | -8.615850e-47 |
| Msa1039520 | Msa1329300 | 0.833263 | 5.896449e-56 | -8.615850e-47 |
| Msa1039520 | Msa1331710 | 0.816676 | 4.890060e-52 | -8.615850e-47 |
| Msa1039520 | Msa1332250 | 0.848729 | 5.090380e-60 | -8.615850e-47 |
| Msa1039520 | Msa1338190 | 0.841327 | 5.081465e-58 | -8.615850e-47 |
| Msa1039520 | Msa1340980 | 0.823229 | 1.549985e-53 | -8.615850e-47 |
| Msa1039520 | Msa1343260 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa1039520 | Msa1349570 | 0.846612 | 1.946986e-59 | -8.615850e-47 |
| Msa1039520 | Msa1356790 | 0.841368 | 4.958867e-58 | -8.615850e-47 |
| Msa1039520 | Msa1362790 | 0.869306 | 3.417563e-66 | -8.615850e-47 |
| Msa1039520 | Msa1363330 | 0.840796 | 7.007857e-58 | -8.615850e-47 |
| Msa1039520 | Msa1366180 | 0.813952 | 1.972712e-51 | -8.615850e-47 |
| Msa1039520 | Msa1369190 | 0.871242 | 7.933887e-67 | -8.615850e-47 |
| Msa1039520 | Msa1386600 | 0.840860 | 6.741272e-58 | -8.615850e-47 |
| Msa1039520 | Msa1387410 | 0.845850 | 3.139750e-59 | -8.615850e-47 |
| Msa1039520 | Msa1407070 | 0.834219 | 3.401586e-56 | -8.615850e-47 |
| Msa1039520 | Msa1410440 | 0.816389 | 5.671963e-52 | -8.615850e-47 |
| Msa1039520 | Msa1413500 | 0.872173 | 3.898312e-67 | -8.615850e-47 |
| Msa1039520 | Msa1418770 | 0.836588 | 8.569983e-57 | -8.615850e-47 |
| Msa1039520 | Msa1426120 | 0.816786 | 4.622189e-52 | -8.615850e-47 |
| Msa1039520 | Msa1426490 | 0.844817 | 5.975721e-59 | -8.615850e-47 |
| Msa1039520 | Msa1427560 | 0.852407 | 4.711897e-61 | -8.615850e-47 |
| Msa1039520 | Msa1437280 | 0.811716 | 6.090845e-51 | -8.615850e-47 |
| Msa1039520 | Msa1448690 | 0.810855 | 9.367489e-51 | -8.615850e-47 |
| Msa1039520 | Msa1456050 | 0.823885 | 1.088451e-53 | -8.615850e-47 |
| Msa1039520 | Msa1462860 | 0.807355 | 5.264369e-50 | -8.615850e-47 |
| Msa1039520 | Msa1465260 | 0.816156 | 6.394931e-52 | -8.615850e-47 |
| Msa0244780 | Msa1039520 | 0.822251 | 2.618069e-53 | -8.615850e-47 |
| Msa0258850 | Msa1039520 | 0.828235 | 1.006159e-54 | -8.615850e-47 |
| Msa0262480 | Msa1039520 | 0.818225 | 2.190280e-52 | -8.615850e-47 |
| Msa0264010 | Msa1039520 | 0.819546 | 1.097201e-52 | -8.615850e-47 |
| Msa0266370 | Msa1039520 | 0.803013 | 4.268270e-49 | -8.615850e-47 |
| Msa0268130 | Msa1039520 | 0.802953 | 4.391413e-49 | -8.615850e-47 |
| Msa0269180 | Msa1039520 | 0.836594 | 8.538386e-57 | -8.615850e-47 |
| Msa0289580 | Msa1039520 | 0.833624 | 4.791045e-56 | -8.615850e-47 |
| Msa0289610 | Msa1039520 | 0.835975 | 1.227162e-56 | -8.615850e-47 |
| Msa0297830 | Msa1039520 | 0.870335 | 1.577098e-66 | -8.615850e-47 |
| Msa0298200 | Msa1039520 | 0.824039 | 1.001770e-53 | -8.615850e-47 |
| Msa0298990 | Msa1039520 | 0.813762 | 2.172466e-51 | -8.615850e-47 |
| Msa0300350 | Msa1039520 | 0.836999 | 6.733543e-57 | -8.615850e-47 |
| Msa0306690 | Msa1039520 | 0.813850 | 2.077544e-51 | -8.615850e-47 |
| Msa0310080 | Msa1039520 | 0.838636 | 2.556642e-57 | -8.615850e-47 |
| Msa0317910 | Msa1039520 | 0.827944 | 1.182817e-54 | -8.615850e-47 |
| Msa0327300 | Msa1039520 | 0.839700 | 1.354462e-57 | -8.615850e-47 |
| Msa0327330 | Msa1039520 | 0.824791 | 6.666487e-54 | -8.615850e-47 |
| Msa0333910 | Msa1039520 | 0.803432 | 3.496782e-49 | -8.615850e-47 |
| Msa0335840 | Msa1039520 | 0.870397 | 1.505304e-66 | -8.615850e-47 |
| Msa0336010 | Msa1039520 | 0.836456 | 9.260879e-57 | -8.615850e-47 |
| Msa0348830 | Msa1039520 | 0.855637 | 5.518697e-62 | -8.615850e-47 |
| Msa0483110 | Msa1039520 | 0.830970 | 2.175975e-55 | -8.615850e-47 |
| Msa0526540 | Msa1039520 | 0.842272 | 2.861657e-58 | -8.615850e-47 |
| Msa0527150 | Msa1039520 | 0.834068 | 3.711503e-56 | -8.615850e-47 |
| Msa0531650 | Msa1039520 | 0.809459 | 1.872372e-50 | -8.615850e-47 |
| Msa0571920 | Msa1039520 | 0.805874 | 1.081438e-49 | -8.615850e-47 |
| Msa0576940 | Msa1039520 | 0.835554 | 1.568435e-56 | -8.615850e-47 |
| Msa0584030 | Msa1039520 | 0.802954 | 4.389871e-49 | -8.615850e-47 |
| Msa0586420 | Msa1039520 | 0.804031 | 2.625519e-49 | -8.615850e-47 |
| Msa0867060 | Msa1039520 | 0.825807 | 3.832325e-54 | -8.615850e-47 |
| Msa0876170 | Msa1039520 | 0.831179 | 1.933371e-55 | -8.615850e-47 |
| Msa0888810 | Msa1039520 | 0.882840 | 7.430090e-71 | -8.615850e-47 |
| Msa0915540 | Msa1039520 | 0.803385 | 3.575397e-49 | -8.615850e-47 |
| Msa0945480 | Msa1039520 | 0.821500 | 3.907271e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039520 | MtrunA17_Chr7g0272321 | 97.581 | 124 | 3 | 0 | 1 | 124 | 1 | 124 | 2.65e-86 | 246 |
| Msa1039520 | MtrunA17_Chr1g0195471 | 94.915 | 118 | 6 | 0 | 7 | 124 | 2 | 119 | 4.12e-69 | 203 |
| Msa1039520 | MtrunA17_Chr1g0192241 | 94.915 | 59 | 3 | 0 | 66 | 124 | 18 | 76 | 1.74e-25 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039520 | AT3G05560.1 | 87.903 | 124 | 15 | 0 | 1 | 124 | 1 | 124 | 1.84e-67 | 199 |
| Msa1039520 | AT3G05560.3 | 87.903 | 124 | 15 | 0 | 1 | 124 | 1 | 124 | 1.84e-67 | 199 |
| Msa1039520 | AT3G05560.2 | 87.903 | 124 | 15 | 0 | 1 | 124 | 1 | 124 | 1.84e-67 | 199 |
| Msa1039520 | AT5G27770.1 | 86.726 | 113 | 15 | 0 | 1 | 113 | 1 | 113 | 8.66e-52 | 160 |
| Msa1039520 | AT1G02830.1 | 70.085 | 117 | 33 | 1 | 1 | 115 | 1 | 117 | 8.70e-45 | 142 |
Find 43 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATACTTGATGCTGAATTT+TGG | 0.259787 | 7_1:+76785045 | None:intergenic |
| TGCACCCTTCTTCTTTCCCT+TGG | 0.344547 | 7_1:+76786681 | None:intergenic |
| AAAGCTAGCTCTAGTGATAA+AGG | 0.353854 | 7_1:+76785241 | None:intergenic |
| CAAGAGATGAGAGCAGCTTT+AGG | 0.353880 | 7_1:+76786912 | None:intergenic |
| ACTAGAGCTAGCTTTCGTTT+TGG | 0.375738 | 7_1:-76785233 | Msa1039520:three_prime_UTR |
| TGATTATTTAATAGTTGTGT+TGG | 0.426344 | 7_1:-76785152 | Msa1039520:three_prime_UTR |
| TCCATGATCTTGTCTTCCAC+TGG | 0.448631 | 7_1:+76786634 | None:intergenic |
| GGTGGAAAAGCTGGTGCTCT+TGG | 0.478615 | 7_1:-76786568 | Msa1039520:CDS |
| AAGCTAGCTCTAGTGATAAA+GGG | 0.483158 | 7_1:+76785242 | None:intergenic |
| TCTCTTGCAACCCTCGCCGC+TGG | 0.489525 | 7_1:-76786896 | Msa1039520:five_prime_UTR |
| ATCAAGGTCGGTGGAAAAGC+TGG | 0.491281 | 7_1:-76786577 | Msa1039520:CDS |
| TCATTATCTCAAGCAATACT+TGG | 0.502195 | 7_1:+76785210 | None:intergenic |
| CACTGGCTTAGCACAGTCAA+TGG | 0.524581 | 7_1:+76786651 | None:intergenic |
| ATGATGCATAGATTCACAAA+AGG | 0.527231 | 7_1:-76786738 | Msa1039520:intron |
| CATTGCTGAGAACGAGGGAG+AGG | 0.527747 | 7_1:-76785313 | Msa1039520:CDS |
| TGGTGCCAAGGGAAAGAAGA+AGG | 0.529349 | 7_1:-76786686 | Msa1039520:CDS |
| CTTGCTCTTCTCACGGGTAA+CGG | 0.534877 | 7_1:+76786534 | None:intergenic |
| GCATAGATTCACAAAAGGTA+AGG | 0.538383 | 7_1:-76786733 | Msa1039520:intron |
| GTTTCTTCAAGAGCGAATCA+AGG | 0.539769 | 7_1:-76786593 | Msa1039520:CDS |
| CAGTGCAACTGTTTAACAGC+AGG | 0.541665 | 7_1:+76785081 | None:intergenic |
| TGAAGAGAGACCAGCGGCGA+GGG | 0.543454 | 7_1:+76786886 | None:intergenic |
| ATAGAAGTATCTATGAGCTC+AGG | 0.546088 | 7_1:-76785344 | Msa1039520:CDS |
| AGTGATCTTGCTCTTCTCAC+GGG | 0.552636 | 7_1:+76786528 | None:intergenic |
| GAAAGGGAATTACCGTTCGA+AGG | 0.553022 | 7_1:+76786861 | None:intergenic |
| CAGTGATCTTGCTCTTCTCA+CGG | 0.553223 | 7_1:+76786527 | None:intergenic |
| GCCAGTGGAAGACAAGATCA+TGG | 0.553292 | 7_1:-76786635 | Msa1039520:CDS |
| TAGTAACGCAGCTGGTGCCA+AGG | 0.558833 | 7_1:-76786698 | Msa1039520:CDS |
| CTTCTCACGGGTAACGGTGA+CGG | 0.568235 | 7_1:+76786540 | None:intergenic |
| AGAAACACAATGTAAGAGAC+TGG | 0.568481 | 7_1:-76785392 | Msa1039520:CDS |
| ATGAGTCGTAGTAACGCAGC+TGG | 0.571019 | 7_1:-76786706 | Msa1039520:CDS |
| CTTCAACATTGCTGAGAACG+AGG | 0.581013 | 7_1:-76785319 | Msa1039520:CDS |
| CTTGGAAAAGTTACTGTCAG+AGG | 0.604590 | 7_1:+76786501 | None:intergenic |
| CTTAGCACAGTCAATGGTGA+AGG | 0.610280 | 7_1:+76786657 | None:intergenic |
| AGTAACGCAGCTGGTGCCAA+GGG | 0.611343 | 7_1:-76786697 | Msa1039520:CDS |
| CTTCAAGAGCGAATCAAGGT+CGG | 0.612896 | 7_1:-76786589 | Msa1039520:CDS |
| TGCAACTGTTTAACAGCAGG+AGG | 0.613856 | 7_1:+76785084 | None:intergenic |
| CATTGACTGTGCTAAGCCAG+TGG | 0.621872 | 7_1:-76786650 | Msa1039520:CDS |
| TTGAAGAGAGACCAGCGGCG+AGG | 0.633100 | 7_1:+76786885 | None:intergenic |
| CAAGAGCGAATCAAGGTCGG+TGG | 0.643278 | 7_1:-76786586 | Msa1039520:CDS |
| GGTGCCAAGGGAAAGAAGAA+GGG | 0.657143 | 7_1:-76786685 | Msa1039520:CDS |
| TCTCTCTTCAAACCTTCGAA+CGG | 0.668536 | 7_1:-76786873 | Msa1039520:intron |
| AAGGTTTGAAGAGAGACCAG+CGG | 0.677612 | 7_1:+76786880 | None:intergenic |
| TTCAACATTGCTGAGAACGA+GGG | 0.691023 | 7_1:-76785318 | Msa1039520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GCTTTGATTTAATATTTTAT+TGG | - | chr7_1:76785512-76785531 | Msa1039520:intron | 15.0% |
| !! | TAAAGATAAATGATAGTTAT+GGG | + | chr7_1:76786190-76786209 | None:intergenic | 15.0% |
| !!! | GCTTTGATTTAATATTTTAT+TGG | - | chr7_1:76785512-76785531 | Msa1039520:intron | 15.0% |
| !! | TAAAGATAAATGATAGTTAT+GGG | + | chr7_1:76786190-76786209 | None:intergenic | 15.0% |
| !!! | CATTTTCATTTTCATAAACT+CGG | - | chr7_1:76785118-76785137 | Msa1039520:three_prime_UTR | 20.0% |
| !! | ATCTATTAACAGAAAATCAA+TGG | + | chr7_1:76785152-76785171 | None:intergenic | 20.0% |
| !!! | TCATTTTGGTTTCAATTTAT+TGG | - | chr7_1:76785647-76785666 | Msa1039520:intron | 20.0% |
| !!! | TAATAAGTGTTCTTTAAGAT+AGG | - | chr7_1:76785791-76785810 | Msa1039520:intron | 20.0% |
| !!! | ACATCTTATTTATAGCTTAT+TGG | - | chr7_1:76785868-76785887 | Msa1039520:intron | 20.0% |
| !! | AAGATAAATGATAGAGTAAT+GGG | + | chr7_1:76786134-76786153 | None:intergenic | 20.0% |
| !! | AAAGATAAATGATAGAGTAA+TGG | + | chr7_1:76786135-76786154 | None:intergenic | 20.0% |
| !! | GTAAAGATAAATGATAGTTA+TGG | + | chr7_1:76786191-76786210 | None:intergenic | 20.0% |
| !! | ATACTATATTCTGTAGATAT+AGG | + | chr7_1:76786289-76786308 | None:intergenic | 20.0% |
| !! | ATATCTACAGAATATAGTAT+TGG | - | chr7_1:76786289-76786308 | Msa1039520:intron | 20.0% |
| !! | TATCTACAGAATATAGTATT+GGG | - | chr7_1:76786290-76786309 | Msa1039520:intron | 20.0% |
| !! | TGATTATTTAATAGTTGTGT+TGG | - | chr7_1:76786782-76786801 | Msa1039520:intron | 20.0% |
| !!! | CATTTTCATTTTCATAAACT+CGG | - | chr7_1:76785118-76785137 | Msa1039520:three_prime_UTR | 20.0% |
| !! | ATCTATTAACAGAAAATCAA+TGG | + | chr7_1:76785152-76785171 | None:intergenic | 20.0% |
| !!! | TCATTTTGGTTTCAATTTAT+TGG | - | chr7_1:76785647-76785666 | Msa1039520:intron | 20.0% |
| !!! | TAATAAGTGTTCTTTAAGAT+AGG | - | chr7_1:76785791-76785810 | Msa1039520:intron | 20.0% |
| !!! | ACATCTTATTTATAGCTTAT+TGG | - | chr7_1:76785868-76785887 | Msa1039520:intron | 20.0% |
| !! | AAGATAAATGATAGAGTAAT+GGG | + | chr7_1:76786134-76786153 | None:intergenic | 20.0% |
| !! | AAAGATAAATGATAGAGTAA+TGG | + | chr7_1:76786135-76786154 | None:intergenic | 20.0% |
| !! | GTAAAGATAAATGATAGTTA+TGG | + | chr7_1:76786191-76786210 | None:intergenic | 20.0% |
| !! | ATACTATATTCTGTAGATAT+AGG | + | chr7_1:76786289-76786308 | None:intergenic | 20.0% |
| !! | ATATCTACAGAATATAGTAT+TGG | - | chr7_1:76786289-76786308 | Msa1039520:intron | 20.0% |
| !! | TATCTACAGAATATAGTATT+GGG | - | chr7_1:76786290-76786309 | Msa1039520:intron | 20.0% |
| !! | TGATTATTTAATAGTTGTGT+TGG | - | chr7_1:76786782-76786801 | Msa1039520:intron | 20.0% |
| ! | TAATCTATTCGTACAAGAAA+GGG | + | chr7_1:76785092-76785111 | None:intergenic | 25.0% |
| ! | ATAATCTATTCGTACAAGAA+AGG | + | chr7_1:76785093-76785112 | None:intergenic | 25.0% |
| ! | ATTCAGTGAAGATAAGTTAT+TGG | - | chr7_1:76785559-76785578 | Msa1039520:intron | 25.0% |
| !! | TTGCTTGGTTGATTTATTTA+TGG | - | chr7_1:76785599-76785618 | Msa1039520:intron | 25.0% |
| !!! | AAGATAGTTGATAGTCATTT+TGG | - | chr7_1:76785633-76785652 | Msa1039520:intron | 25.0% |
| !! | TTTCAATTTATTGGTCTGTT+TGG | - | chr7_1:76785656-76785675 | Msa1039520:intron | 25.0% |
| ! | ATAACTTAGTGCTTATACAA+CGG | - | chr7_1:76785822-76785841 | Msa1039520:intron | 25.0% |
| ! | AATAAGATGTTTATCCAAAC+AGG | + | chr7_1:76785858-76785877 | None:intergenic | 25.0% |
| ! | AAGTAGTCTCACAAAATTTA+TGG | - | chr7_1:76786073-76786092 | Msa1039520:intron | 25.0% |
| ! | AGTACGATAACAACAATATA+AGG | - | chr7_1:76786378-76786397 | Msa1039520:intron | 25.0% |
| ! | CAATATAAGGTCTACTTAAT+TGG | - | chr7_1:76786391-76786410 | Msa1039520:intron | 25.0% |
| !!! | ATCTGATATTTTGCTGTTTT+TGG | - | chr7_1:76786419-76786438 | Msa1039520:intron | 25.0% |
| !!! | TCTGATATTTTGCTGTTTTT+GGG | - | chr7_1:76786420-76786439 | Msa1039520:intron | 25.0% |
| ! | TAATCTATTCGTACAAGAAA+GGG | + | chr7_1:76785092-76785111 | None:intergenic | 25.0% |
| ! | ATAATCTATTCGTACAAGAA+AGG | + | chr7_1:76785093-76785112 | None:intergenic | 25.0% |
| ! | ATTCAGTGAAGATAAGTTAT+TGG | - | chr7_1:76785559-76785578 | Msa1039520:intron | 25.0% |
| !! | TTGCTTGGTTGATTTATTTA+TGG | - | chr7_1:76785599-76785618 | Msa1039520:intron | 25.0% |
| !!! | AAGATAGTTGATAGTCATTT+TGG | - | chr7_1:76785633-76785652 | Msa1039520:intron | 25.0% |
| !! | TTTCAATTTATTGGTCTGTT+TGG | - | chr7_1:76785656-76785675 | Msa1039520:intron | 25.0% |
| ! | ATAACTTAGTGCTTATACAA+CGG | - | chr7_1:76785822-76785841 | Msa1039520:intron | 25.0% |
| ! | AATAAGATGTTTATCCAAAC+AGG | + | chr7_1:76785858-76785877 | None:intergenic | 25.0% |
| ! | AAGTAGTCTCACAAAATTTA+TGG | - | chr7_1:76786073-76786092 | Msa1039520:intron | 25.0% |
| ! | AGTACGATAACAACAATATA+AGG | - | chr7_1:76786378-76786397 | Msa1039520:intron | 25.0% |
| ! | CAATATAAGGTCTACTTAAT+TGG | - | chr7_1:76786391-76786410 | Msa1039520:intron | 25.0% |
| !!! | ATCTGATATTTTGCTGTTTT+TGG | - | chr7_1:76786419-76786438 | Msa1039520:intron | 25.0% |
| !!! | TCTGATATTTTGCTGTTTTT+GGG | - | chr7_1:76786420-76786439 | Msa1039520:intron | 25.0% |
| ATGATGCATAGATTCACAAA+AGG | - | chr7_1:76785196-76785215 | Msa1039520:three_prime_UTR | 30.0% | |
| GTAAATGAATTATTACCGCT+TGG | + | chr7_1:76785454-76785473 | None:intergenic | 30.0% | |
| AAGTTATTGGCATGAAATCA+TGG | - | chr7_1:76785572-76785591 | Msa1039520:intron | 30.0% | |
| ! | ATTTATTGGTCTGTTTGGAT+TGG | - | chr7_1:76785661-76785680 | Msa1039520:intron | 30.0% |
| ! | ATAAGTTTTGCGAGACTATT+TGG | - | chr7_1:76785707-76785726 | Msa1039520:intron | 30.0% |
| ! | TAAGTTTTGCGAGACTATTT+GGG | - | chr7_1:76785708-76785727 | Msa1039520:intron | 30.0% |
| !! | GTGTTCTTTAAGATAGGTTA+TGG | - | chr7_1:76785797-76785816 | Msa1039520:intron | 30.0% |
| AGTTATGGGACTGTTAAAAT+TGG | + | chr7_1:76786176-76786195 | None:intergenic | 30.0% | |
| TCAGCAAACTAATTCATTGA+AGG | - | chr7_1:76786316-76786335 | Msa1039520:intron | 30.0% | |
| TTTCCGCAACTAATAACATA+AGG | - | chr7_1:76786457-76786476 | Msa1039520:intron | 30.0% | |
| AGACCTTATGTTATTAGTTG+CGG | + | chr7_1:76786463-76786482 | None:intergenic | 30.0% | |
| TCATTATCTCAAGCAATACT+TGG | + | chr7_1:76786727-76786746 | None:intergenic | 30.0% | |
| ! | GAATACTTGATGCTGAATTT+TGG | + | chr7_1:76786892-76786911 | None:intergenic | 30.0% |
| ATGATGCATAGATTCACAAA+AGG | - | chr7_1:76785196-76785215 | Msa1039520:three_prime_UTR | 30.0% | |
| GTAAATGAATTATTACCGCT+TGG | + | chr7_1:76785454-76785473 | None:intergenic | 30.0% | |
| AAGTTATTGGCATGAAATCA+TGG | - | chr7_1:76785572-76785591 | Msa1039520:intron | 30.0% | |
| ! | ATTTATTGGTCTGTTTGGAT+TGG | - | chr7_1:76785661-76785680 | Msa1039520:intron | 30.0% |
| ! | ATAAGTTTTGCGAGACTATT+TGG | - | chr7_1:76785707-76785726 | Msa1039520:intron | 30.0% |
| ! | TAAGTTTTGCGAGACTATTT+GGG | - | chr7_1:76785708-76785727 | Msa1039520:intron | 30.0% |
| !! | GTGTTCTTTAAGATAGGTTA+TGG | - | chr7_1:76785797-76785816 | Msa1039520:intron | 30.0% |
| AGTTATGGGACTGTTAAAAT+TGG | + | chr7_1:76786176-76786195 | None:intergenic | 30.0% | |
| TCAGCAAACTAATTCATTGA+AGG | - | chr7_1:76786316-76786335 | Msa1039520:intron | 30.0% | |
| TTTCCGCAACTAATAACATA+AGG | - | chr7_1:76786457-76786476 | Msa1039520:intron | 30.0% | |
| AGACCTTATGTTATTAGTTG+CGG | + | chr7_1:76786463-76786482 | None:intergenic | 30.0% | |
| TCATTATCTCAAGCAATACT+TGG | + | chr7_1:76786727-76786746 | None:intergenic | 30.0% | |
| ! | GAATACTTGATGCTGAATTT+TGG | + | chr7_1:76786892-76786911 | None:intergenic | 30.0% |
| GCATAGATTCACAAAAGGTA+AGG | - | chr7_1:76785201-76785220 | Msa1039520:three_prime_UTR | 35.0% | |
| ! | CAAATCATTGTTTGCTACTC+TGG | - | chr7_1:76785473-76785492 | Msa1039520:intron | 35.0% |
| TGAAATCATGGTTCATTGCT+TGG | - | chr7_1:76785584-76785603 | Msa1039520:intron | 35.0% | |
| GCTTATTTGAGCTTGTCTAT+GGG | - | chr7_1:76785683-76785702 | Msa1039520:intron | 35.0% | |
| ! | ATTTGGGATAACTTACGAAC+AGG | - | chr7_1:76785724-76785743 | Msa1039520:intron | 35.0% |
| TGCTTATACAACGGCAATAT+AGG | - | chr7_1:76785831-76785850 | Msa1039520:intron | 35.0% | |
| GCTGTCTGAATAAGCTATAT+TGG | - | chr7_1:76785993-76786012 | Msa1039520:intron | 35.0% | |
| ! | AGTAATGGGACTGTTAAGAT+TGG | + | chr7_1:76786120-76786139 | None:intergenic | 35.0% |
| AGAAACACAATGTAAGAGAC+TGG | - | chr7_1:76786542-76786561 | Msa1039520:CDS | 35.0% | |
| !! | ATAGAAGTATCTATGAGCTC+AGG | - | chr7_1:76786590-76786609 | Msa1039520:CDS | 35.0% |
| !! | AAGCTAGCTCTAGTGATAAA+GGG | + | chr7_1:76786695-76786714 | None:intergenic | 35.0% |
| !! | AAAGCTAGCTCTAGTGATAA+AGG | + | chr7_1:76786696-76786715 | None:intergenic | 35.0% |
| GCATAGATTCACAAAAGGTA+AGG | - | chr7_1:76785201-76785220 | Msa1039520:three_prime_UTR | 35.0% | |
| ! | CAAATCATTGTTTGCTACTC+TGG | - | chr7_1:76785473-76785492 | Msa1039520:intron | 35.0% |
| TGAAATCATGGTTCATTGCT+TGG | - | chr7_1:76785584-76785603 | Msa1039520:intron | 35.0% | |
| GCTTATTTGAGCTTGTCTAT+GGG | - | chr7_1:76785683-76785702 | Msa1039520:intron | 35.0% | |
| ! | ATTTGGGATAACTTACGAAC+AGG | - | chr7_1:76785724-76785743 | Msa1039520:intron | 35.0% |
| TGCTTATACAACGGCAATAT+AGG | - | chr7_1:76785831-76785850 | Msa1039520:intron | 35.0% | |
| GCTGTCTGAATAAGCTATAT+TGG | - | chr7_1:76785993-76786012 | Msa1039520:intron | 35.0% | |
| ! | AGTAATGGGACTGTTAAGAT+TGG | + | chr7_1:76786120-76786139 | None:intergenic | 35.0% |
| AGAAACACAATGTAAGAGAC+TGG | - | chr7_1:76786542-76786561 | Msa1039520:CDS | 35.0% | |
| !! | ATAGAAGTATCTATGAGCTC+AGG | - | chr7_1:76786590-76786609 | Msa1039520:CDS | 35.0% |
| !! | AAGCTAGCTCTAGTGATAAA+GGG | + | chr7_1:76786695-76786714 | None:intergenic | 35.0% |
| !! | AAAGCTAGCTCTAGTGATAA+AGG | + | chr7_1:76786696-76786715 | None:intergenic | 35.0% |
| TCTCTCTTCAAACCTTCGAA+CGG | - | chr7_1:76785061-76785080 | Msa1039520:three_prime_UTR | 40.0% | |
| GTTTCTTCAAGAGCGAATCA+AGG | - | chr7_1:76785341-76785360 | Msa1039520:CDS | 40.0% | |
| CTTGGAAAAGTTACTGTCAG+AGG | + | chr7_1:76785436-76785455 | None:intergenic | 40.0% | |
| ! | CTGACAGTAACTTTTCCAAG+CGG | - | chr7_1:76785436-76785455 | Msa1039520:intron | 40.0% |
| GGCTTATTTGAGCTTGTCTA+TGG | - | chr7_1:76785682-76785701 | Msa1039520:intron | 40.0% | |
| AACTTACGAACAGGAGCTTA+TGG | - | chr7_1:76785733-76785752 | Msa1039520:intron | 40.0% | |
| AATTGGCACTACGTATAAGC+TGG | + | chr7_1:76786159-76786178 | None:intergenic | 40.0% | |
| CTGTAGATATAGGACGTGTT+AGG | + | chr7_1:76786279-76786298 | None:intergenic | 40.0% | |
| TTCAACATTGCTGAGAACGA+GGG | - | chr7_1:76786616-76786635 | Msa1039520:CDS | 40.0% | |
| !!! | ACTAGAGCTAGCTTTCGTTT+TGG | - | chr7_1:76786701-76786720 | Msa1039520:CDS | 40.0% |
| TCTCTCTTCAAACCTTCGAA+CGG | - | chr7_1:76785061-76785080 | Msa1039520:three_prime_UTR | 40.0% | |
| GTTTCTTCAAGAGCGAATCA+AGG | - | chr7_1:76785341-76785360 | Msa1039520:CDS | 40.0% | |
| CTTGGAAAAGTTACTGTCAG+AGG | + | chr7_1:76785436-76785455 | None:intergenic | 40.0% | |
| ! | CTGACAGTAACTTTTCCAAG+CGG | - | chr7_1:76785436-76785455 | Msa1039520:intron | 40.0% |
| GGCTTATTTGAGCTTGTCTA+TGG | - | chr7_1:76785682-76785701 | Msa1039520:intron | 40.0% | |
| AACTTACGAACAGGAGCTTA+TGG | - | chr7_1:76785733-76785752 | Msa1039520:intron | 40.0% | |
| AATTGGCACTACGTATAAGC+TGG | + | chr7_1:76786159-76786178 | None:intergenic | 40.0% | |
| CTGTAGATATAGGACGTGTT+AGG | + | chr7_1:76786279-76786298 | None:intergenic | 40.0% | |
| TTCAACATTGCTGAGAACGA+GGG | - | chr7_1:76786616-76786635 | Msa1039520:CDS | 40.0% | |
| !!! | ACTAGAGCTAGCTTTCGTTT+TGG | - | chr7_1:76786701-76786720 | Msa1039520:CDS | 40.0% |
| AAGGTTTGAAGAGAGACCAG+CGG | + | chr7_1:76785057-76785076 | None:intergenic | 45.0% | |
| GAAAGGGAATTACCGTTCGA+AGG | + | chr7_1:76785076-76785095 | None:intergenic | 45.0% | |
| CTTAGCACAGTCAATGGTGA+AGG | + | chr7_1:76785280-76785299 | None:intergenic | 45.0% | |
| TCCATGATCTTGTCTTCCAC+TGG | + | chr7_1:76785303-76785322 | None:intergenic | 45.0% | |
| CTTCAAGAGCGAATCAAGGT+CGG | - | chr7_1:76785345-76785364 | Msa1039520:CDS | 45.0% | |
| AGTGATCTTGCTCTTCTCAC+GGG | + | chr7_1:76785409-76785428 | None:intergenic | 45.0% | |
| CAGTGATCTTGCTCTTCTCA+CGG | + | chr7_1:76785410-76785429 | None:intergenic | 45.0% | |
| ACGGCAATATAGGTCCTGTT+TGG | - | chr7_1:76785841-76785860 | Msa1039520:intron | 45.0% | |
| CTTCAACATTGCTGAGAACG+AGG | - | chr7_1:76786615-76786634 | Msa1039520:CDS | 45.0% | |
| TGCAACTGTTTAACAGCAGG+AGG | + | chr7_1:76786853-76786872 | None:intergenic | 45.0% | |
| CAGTGCAACTGTTTAACAGC+AGG | + | chr7_1:76786856-76786875 | None:intergenic | 45.0% | |
| AAGGTTTGAAGAGAGACCAG+CGG | + | chr7_1:76785057-76785076 | None:intergenic | 45.0% | |
| GAAAGGGAATTACCGTTCGA+AGG | + | chr7_1:76785076-76785095 | None:intergenic | 45.0% | |
| CTTAGCACAGTCAATGGTGA+AGG | + | chr7_1:76785280-76785299 | None:intergenic | 45.0% | |
| TCCATGATCTTGTCTTCCAC+TGG | + | chr7_1:76785303-76785322 | None:intergenic | 45.0% | |
| CTTCAAGAGCGAATCAAGGT+CGG | - | chr7_1:76785345-76785364 | Msa1039520:CDS | 45.0% | |
| AGTGATCTTGCTCTTCTCAC+GGG | + | chr7_1:76785409-76785428 | None:intergenic | 45.0% | |
| CAGTGATCTTGCTCTTCTCA+CGG | + | chr7_1:76785410-76785429 | None:intergenic | 45.0% | |
| ACGGCAATATAGGTCCTGTT+TGG | - | chr7_1:76785841-76785860 | Msa1039520:intron | 45.0% | |
| CTTCAACATTGCTGAGAACG+AGG | - | chr7_1:76786615-76786634 | Msa1039520:CDS | 45.0% | |
| TGCAACTGTTTAACAGCAGG+AGG | + | chr7_1:76786853-76786872 | None:intergenic | 45.0% | |
| CAGTGCAACTGTTTAACAGC+AGG | + | chr7_1:76786856-76786875 | None:intergenic | 45.0% | |
| ATGAGTCGTAGTAACGCAGC+TGG | - | chr7_1:76785228-76785247 | Msa1039520:three_prime_UTR | 50.0% | |
| ! | TGGTGCCAAGGGAAAGAAGA+AGG | - | chr7_1:76785248-76785267 | Msa1039520:three_prime_UTR | 50.0% |
| GGTGCCAAGGGAAAGAAGAA+GGG | - | chr7_1:76785249-76785268 | Msa1039520:three_prime_UTR | 50.0% | |
| TGCACCCTTCTTCTTTCCCT+TGG | + | chr7_1:76785256-76785275 | None:intergenic | 50.0% | |
| !! | CACTGGCTTAGCACAGTCAA+TGG | + | chr7_1:76785286-76785305 | None:intergenic | 50.0% |
| ! | CATTGACTGTGCTAAGCCAG+TGG | - | chr7_1:76785284-76785303 | Msa1039520:exon | 50.0% |
| GCCAGTGGAAGACAAGATCA+TGG | - | chr7_1:76785299-76785318 | Msa1039520:exon | 50.0% | |
| ATCAAGGTCGGTGGAAAAGC+TGG | - | chr7_1:76785357-76785376 | Msa1039520:CDS | 50.0% | |
| CTTGCTCTTCTCACGGGTAA+CGG | + | chr7_1:76785403-76785422 | None:intergenic | 50.0% | |
| ATGAGTCGTAGTAACGCAGC+TGG | - | chr7_1:76785228-76785247 | Msa1039520:three_prime_UTR | 50.0% | |
| ! | TGGTGCCAAGGGAAAGAAGA+AGG | - | chr7_1:76785248-76785267 | Msa1039520:three_prime_UTR | 50.0% |
| GGTGCCAAGGGAAAGAAGAA+GGG | - | chr7_1:76785249-76785268 | Msa1039520:three_prime_UTR | 50.0% | |
| TGCACCCTTCTTCTTTCCCT+TGG | + | chr7_1:76785256-76785275 | None:intergenic | 50.0% | |
| !! | CACTGGCTTAGCACAGTCAA+TGG | + | chr7_1:76785286-76785305 | None:intergenic | 50.0% |
| ! | CATTGACTGTGCTAAGCCAG+TGG | - | chr7_1:76785284-76785303 | Msa1039520:exon | 50.0% |
| GCCAGTGGAAGACAAGATCA+TGG | - | chr7_1:76785299-76785318 | Msa1039520:exon | 50.0% | |
| ATCAAGGTCGGTGGAAAAGC+TGG | - | chr7_1:76785357-76785376 | Msa1039520:CDS | 50.0% | |
| CTTGCTCTTCTCACGGGTAA+CGG | + | chr7_1:76785403-76785422 | None:intergenic | 50.0% | |
| ! | TAGTAACGCAGCTGGTGCCA+AGG | - | chr7_1:76785236-76785255 | Msa1039520:three_prime_UTR | 55.0% |
| ! | AGTAACGCAGCTGGTGCCAA+GGG | - | chr7_1:76785237-76785256 | Msa1039520:three_prime_UTR | 55.0% |
| CAAGAGCGAATCAAGGTCGG+TGG | - | chr7_1:76785348-76785367 | Msa1039520:CDS | 55.0% | |
| GGTGGAAAAGCTGGTGCTCT+TGG | - | chr7_1:76785366-76785385 | Msa1039520:CDS | 55.0% | |
| ! | CTTCTCACGGGTAACGGTGA+CGG | + | chr7_1:76785397-76785416 | None:intergenic | 55.0% |
| CATTGCTGAGAACGAGGGAG+AGG | - | chr7_1:76786621-76786640 | Msa1039520:CDS | 55.0% | |
| ! | TAGTAACGCAGCTGGTGCCA+AGG | - | chr7_1:76785236-76785255 | Msa1039520:three_prime_UTR | 55.0% |
| ! | AGTAACGCAGCTGGTGCCAA+GGG | - | chr7_1:76785237-76785256 | Msa1039520:three_prime_UTR | 55.0% |
| CAAGAGCGAATCAAGGTCGG+TGG | - | chr7_1:76785348-76785367 | Msa1039520:CDS | 55.0% | |
| GGTGGAAAAGCTGGTGCTCT+TGG | - | chr7_1:76785366-76785385 | Msa1039520:CDS | 55.0% | |
| ! | CTTCTCACGGGTAACGGTGA+CGG | + | chr7_1:76785397-76785416 | None:intergenic | 55.0% |
| CATTGCTGAGAACGAGGGAG+AGG | - | chr7_1:76786621-76786640 | Msa1039520:CDS | 55.0% | |
| TGAAGAGAGACCAGCGGCGA+GGG | + | chr7_1:76785051-76785070 | None:intergenic | 60.0% | |
| TTGAAGAGAGACCAGCGGCG+AGG | + | chr7_1:76785052-76785071 | None:intergenic | 60.0% | |
| TGAAGAGAGACCAGCGGCGA+GGG | + | chr7_1:76785051-76785070 | None:intergenic | 60.0% | |
| TTGAAGAGAGACCAGCGGCG+AGG | + | chr7_1:76785052-76785071 | None:intergenic | 60.0% | |
| TCTCTTGCAACCCTCGCCGC+TGG | - | chr7_1:76785038-76785057 | Msa1039520:three_prime_UTR | 65.0% | |
| TCTCTTGCAACCCTCGCCGC+TGG | - | chr7_1:76785038-76785057 | Msa1039520:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 76785025 | 76786931 | 76785025 | ID=Msa1039520;Name=Msa1039520 |
| chr7_1 | mRNA | 76785025 | 76786931 | 76785025 | ID=Msa1039520-mRNA-1;Parent=Msa1039520;Name=Msa1039520-mRNA-1;_AED=0.00;_eAED=0.00;_QI=79|1|1|1|0.5|0.33|3|277|124 |
| chr7_1 | exon | 76785025 | 76785446 | 76785025 | ID=Msa1039520-mRNA-1:exon:19958;Parent=Msa1039520-mRNA-1 |
| chr7_1 | exon | 76786499 | 76786749 | 76786499 | ID=Msa1039520-mRNA-1:exon:19957;Parent=Msa1039520-mRNA-1 |
| chr7_1 | exon | 76786874 | 76786931 | 76786874 | ID=Msa1039520-mRNA-1:exon:19956;Parent=Msa1039520-mRNA-1 |
| chr7_1 | five_prime_UTR | 76786874 | 76786931 | 76786874 | ID=Msa1039520-mRNA-1:five_prime_utr;Parent=Msa1039520-mRNA-1 |
| chr7_1 | five_prime_UTR | 76786729 | 76786749 | 76786729 | ID=Msa1039520-mRNA-1:five_prime_utr;Parent=Msa1039520-mRNA-1 |
| chr7_1 | CDS | 76786499 | 76786728 | 76786499 | ID=Msa1039520-mRNA-1:cds;Parent=Msa1039520-mRNA-1 |
| chr7_1 | CDS | 76785302 | 76785446 | 76785302 | ID=Msa1039520-mRNA-1:cds;Parent=Msa1039520-mRNA-1 |
| chr7_1 | three_prime_UTR | 76785025 | 76785301 | 76785025 | ID=Msa1039520-mRNA-1:three_prime_utr;Parent=Msa1039520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
