Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192230 | XP_003593601.1 | 100.000 | 248 | 0 | 0 | 1 | 248 | 1 | 248 | 5.82e-179 | 501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192230 | sp|Q9M3V8|RS6_ASPOF | 91.532 | 248 | 21 | 0 | 1 | 248 | 1 | 248 | 6.99e-166 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192230 | Q2HTS1 | 100.000 | 248 | 0 | 0 | 1 | 248 | 1 | 248 | 2.78e-179 | 501 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0192230 | 0.804768 | 1.843645e-49 | -8.615850e-47 |
| Msa0002790 | Msa0192230 | 0.801560 | 8.500353e-49 | -8.615850e-47 |
| Msa0022970 | Msa0192230 | 0.839743 | 1.320150e-57 | -8.615850e-47 |
| Msa0046830 | Msa0192230 | 0.834413 | 3.041034e-56 | -8.615850e-47 |
| Msa0091880 | Msa0192230 | 0.810872 | 9.289007e-51 | -8.615850e-47 |
| Msa0116130 | Msa0192230 | 0.808551 | 2.929467e-50 | -8.615850e-47 |
| Msa0116670 | Msa0192230 | 0.801303 | 9.595635e-49 | -8.615850e-47 |
| Msa0118710 | Msa0192230 | 0.832584 | 8.696239e-56 | -8.615850e-47 |
| Msa0173530 | Msa0192230 | 0.800960 | 1.127551e-48 | -8.615850e-47 |
| Msa0192160 | Msa0192230 | 0.929630 | 5.271365e-93 | -8.615850e-47 |
| Msa0192230 | Msa0218830 | 0.859040 | 5.443343e-63 | -8.615850e-47 |
| Msa0192230 | Msa0219120 | 0.814759 | 1.308052e-51 | -8.615850e-47 |
| Msa0192230 | Msa0258850 | 0.802730 | 4.883739e-49 | -8.615850e-47 |
| Msa0192230 | Msa0262480 | 0.800136 | 1.660705e-48 | -8.615850e-47 |
| Msa0192230 | Msa0266370 | 0.803634 | 3.174354e-49 | -8.615850e-47 |
| Msa0192230 | Msa0289580 | 0.801906 | 7.217024e-49 | -8.615850e-47 |
| Msa0192230 | Msa0289610 | 0.810435 | 1.154168e-50 | -8.615850e-47 |
| Msa0192230 | Msa0298200 | 0.810078 | 1.378511e-50 | -8.615850e-47 |
| Msa0192230 | Msa0300350 | 0.811551 | 6.615355e-51 | -8.615850e-47 |
| Msa0192230 | Msa0313100 | 0.882824 | 7.533170e-71 | -8.615850e-47 |
| Msa0192230 | Msa0327300 | 0.818322 | 2.082314e-52 | -8.615850e-47 |
| Msa0192230 | Msa0382210 | 0.832995 | 6.876435e-56 | -8.615850e-47 |
| Msa0192230 | Msa0443390 | 0.812962 | 3.255998e-51 | -8.615850e-47 |
| Msa0192230 | Msa0483110 | 0.811598 | 6.462848e-51 | -8.615850e-47 |
| Msa0192230 | Msa0526540 | 0.810647 | 1.038865e-50 | -8.615850e-47 |
| Msa0192230 | Msa0573500 | 0.806128 | 9.560689e-50 | -8.615850e-47 |
| Msa0192230 | Msa0576940 | 0.813204 | 2.881672e-51 | -8.615850e-47 |
| Msa0192230 | Msa0780490 | 0.814954 | 1.183983e-51 | -8.615850e-47 |
| Msa0192230 | Msa0867060 | 0.810928 | 9.032240e-51 | -8.615850e-47 |
| Msa0192230 | Msa1019240 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0192230 | Msa1048690 | 0.818685 | 1.723130e-52 | -8.615850e-47 |
| Msa0192230 | Msa1215820 | 0.805091 | 1.577960e-49 | -8.615850e-47 |
| Msa0192230 | Msa1266060 | 0.811972 | 5.358140e-51 | -8.615850e-47 |
| Msa0192230 | Msa1332250 | 0.825094 | 5.652717e-54 | -8.615850e-47 |
| Msa0192230 | Msa1349570 | 0.814587 | 1.428353e-51 | -8.615850e-47 |
| Msa0192230 | Msa1363330 | 0.808380 | 3.186694e-50 | -8.615850e-47 |
| Msa0192230 | Msa1386600 | 0.808122 | 3.617157e-50 | -8.615850e-47 |
| Msa0192230 | Msa1410440 | 0.813275 | 2.778968e-51 | -8.615850e-47 |
| Msa0192230 | Msa1426370 | 0.806207 | 9.199908e-50 | -8.615850e-47 |
| Msa0192230 | Msa1426490 | 0.825733 | 3.991107e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192230 | MtrunA17_Chr2g0282411 | 100.000 | 248 | 0 | 0 | 1 | 248 | 1 | 248 | 0.0 | 501 |
| Msa0192230 | MtrunA17_Chr4g0047021 | 96.774 | 248 | 8 | 0 | 1 | 248 | 1 | 248 | 1.60e-176 | 485 |
| Msa0192230 | MtrunA17_Chr7g0234621 | 95.968 | 248 | 10 | 0 | 1 | 248 | 1 | 248 | 4.54e-175 | 481 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192230 | AT5G10360.1 | 92.562 | 242 | 18 | 0 | 1 | 242 | 1 | 242 | 1.70e-163 | 452 |
| Msa0192230 | AT4G31700.1 | 92.149 | 242 | 19 | 0 | 1 | 242 | 1 | 242 | 4.25e-155 | 431 |
| Msa0192230 | AT5G10360.2 | 73.967 | 242 | 11 | 1 | 1 | 242 | 1 | 190 | 1.23e-118 | 337 |
| Msa0192230 | AT4G31700.2 | 91.667 | 180 | 15 | 0 | 63 | 242 | 1 | 180 | 1.19e-106 | 306 |
Find 92 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCAAAGATGATAGAAATT+AGG | 0.150491 | 2_1:+7979301 | None:intergenic |
| ATTGAAGAGCTTACGGATTT+TGG | 0.153100 | 2_1:+7977000 | None:intergenic |
| TAAATTGTAGTCGTGCATTT+TGG | 0.161193 | 2_1:-7978982 | Msa0192230:intron |
| TTGCTACTCGCAGGAATTTA+AGG | 0.172205 | 2_1:-7978838 | Msa0192230:intron |
| CTCAAAGATGATAGAAATTA+GGG | 0.226973 | 2_1:+7979302 | None:intergenic |
| CTCTTAGGACCCCTCATTCT+TGG | 0.233777 | 2_1:+7977028 | None:intergenic |
| CTCACCGGTGCAGTTCTTTC+CGG | 0.238048 | 2_1:-7975491 | Msa0192230:three_prime_UTR |
| GAGGATCTCACAAGAGGTTT+TGG | 0.240752 | 2_1:-7978954 | Msa0192230:CDS |
| CATCGATTTCAAGCTTCTTC+TGG | 0.245851 | 2_1:+7979104 | None:intergenic |
| GTGACCAGGCGCTGTATCTT+TGG | 0.280234 | 2_1:+7975880 | None:intergenic |
| TGACCAGGCGCTGTATCTTT+GGG | 0.285753 | 2_1:+7975881 | None:intergenic |
| TTCATTGTGAAATGTGGATT+TGG | 0.296731 | 2_1:+7979239 | None:intergenic |
| GTTAACACACCCTGCTTCAT+TGG | 0.338665 | 2_1:+7978771 | None:intergenic |
| GGAACGCCGCAGTGAGAGTT+TGG | 0.366197 | 2_1:-7975737 | Msa0192230:CDS |
| TGGTCTCTTGACATATAGTT+GGG | 0.391584 | 2_1:-7975385 | Msa0192230:three_prime_UTR |
| TGCTACTCGCAGGAATTTAA+GGG | 0.399045 | 2_1:-7978837 | Msa0192230:intron |
| AGACCTCTCTGTTCTGAACT+TGG | 0.408965 | 2_1:-7977104 | Msa0192230:CDS |
| ACTTCTTGCCTCTAGATTGA+AGG | 0.416460 | 2_1:-7975767 | Msa0192230:CDS |
| TTGTAGCCTTGTCTGTCACT+TGG | 0.431299 | 2_1:-7975312 | Msa0192230:three_prime_UTR |
| TTGGTCTCTTGACATATAGT+TGG | 0.432634 | 2_1:-7975386 | Msa0192230:three_prime_UTR |
| TGGAAAGATTGAAGAGCTTA+CGG | 0.437945 | 2_1:+7976993 | None:intergenic |
| CTCTTTCTTTGAAGAGTCAA+AGG | 0.440470 | 2_1:+7975856 | None:intergenic |
| AAGTTCAGAACAGAGAGGTC+TGG | 0.450666 | 2_1:+7977106 | None:intergenic |
| AAATCCACATTTCACAATGA+AGG | 0.452458 | 2_1:-7979237 | Msa0192230:intron |
| CGCTGCAACACCTTGCTTAG+CGG | 0.459636 | 2_1:+7975690 | None:intergenic |
| GGCGCAATGGAGAGCGAAGA+AGG | 0.461619 | 2_1:-7977156 | Msa0192230:CDS |
| CTTTGACTCTTCAAAGAAAG+AGG | 0.462251 | 2_1:-7975855 | Msa0192230:CDS |
| CTTCCTGACATCATCATCCT+TGG | 0.467618 | 2_1:+7976973 | None:intergenic |
| AGCAAGAGGCGAACACGACC+AGG | 0.471596 | 2_1:+7978747 | None:intergenic |
| ACAAGGATTTCCAATGAAGC+AGG | 0.480359 | 2_1:-7978781 | Msa0192230:CDS |
| GAACTTGGTTATTGTGAAGA+AGG | 0.484415 | 2_1:-7977089 | Msa0192230:CDS |
| GACAAGGCTACAAACACAAC+AGG | 0.494733 | 2_1:+7975322 | None:intergenic |
| AAGGGTGAAAATGATTTGCC+TGG | 0.498405 | 2_1:-7977070 | Msa0192230:CDS |
| AGTTCAGAACAGAGAGGTCT+GGG | 0.504245 | 2_1:+7977107 | None:intergenic |
| TGTAGCCTTGTCTGTCACTT+GGG | 0.516737 | 2_1:-7975311 | Msa0192230:three_prime_UTR |
| TTTCCAAGGATGATGATGTC+AGG | 0.517231 | 2_1:-7976976 | Msa0192230:CDS |
| GACCAGGCGCTGTATCTTTG+GGG | 0.517909 | 2_1:+7975882 | None:intergenic |
| TTCTTCTGGCAACCAGTGGT+TGG | 0.519589 | 2_1:+7979118 | None:intergenic |
| CATTGCGCCTTCCGTGTCCT+CGG | 0.523620 | 2_1:+7977170 | None:intergenic |
| CAGCAAGTACACGCAAGGTC+CGG | 0.528584 | 2_1:+7975472 | None:intergenic |
| AACGTTGCAAATCCAACCAC+TGG | 0.533153 | 2_1:-7979130 | Msa0192230:CDS |
| CTTCCGTGTCCTCGGAAACA+AGG | 0.533549 | 2_1:+7977178 | None:intergenic |
| GAGCTTCTTCGTTCGCGATA+CGG | 0.533638 | 2_1:+7979266 | None:intergenic |
| GTTTGGCTAAGAAGAGATCA+AGG | 0.534691 | 2_1:-7975720 | Msa0192230:CDS |
| ATGTTGAAAAGCCAAGAATG+AGG | 0.544680 | 2_1:-7977039 | Msa0192230:CDS |
| TACTCGTCTGATGAATCGAT+TGG | 0.544878 | 2_1:-7975405 | Msa0192230:three_prime_UTR |
| GTAACCTTCATTGTGAAATG+TGG | 0.547012 | 2_1:+7979233 | None:intergenic |
| AGCCCCAAAGATACAGCGCC+TGG | 0.547274 | 2_1:-7975884 | Msa0192230:CDS |
| AAGCTTCTTCTGGCAACCAG+TGG | 0.547317 | 2_1:+7979114 | None:intergenic |
| CGGACTTTCACAACCAAAGC+AGG | 0.557230 | 2_1:-7976932 | Msa0192230:intron |
| CGAAGAAGGAAGTCTGTTCG+TGG | 0.557458 | 2_1:-7977142 | Msa0192230:CDS |
| CGAGGACACGGAAGGCGCAA+TGG | 0.561877 | 2_1:-7977169 | Msa0192230:CDS |
| CTCTAGATTGAAGGAGCAGA+GGG | 0.562368 | 2_1:-7975758 | Msa0192230:CDS |
| GGATACGTCTTCAAAATCAC+TGG | 0.563795 | 2_1:-7978816 | Msa0192230:CDS |
| GCTTCTTGATCTCTTCTCAC+CGG | 0.564576 | 2_1:-7975506 | Msa0192230:three_prime_UTR |
| AAGCAGGGTGTGTTAACCCC+TGG | 0.565983 | 2_1:-7978765 | Msa0192230:CDS |
| TGTTGAAAAGCCAAGAATGA+GGG | 0.570225 | 2_1:-7977038 | Msa0192230:CDS |
| ACTCCTTGTTTCCGAGGACA+CGG | 0.574407 | 2_1:-7977181 | Msa0192230:CDS |
| TTTGACTCTTCAAAGAAAGA+GGG | 0.574504 | 2_1:-7975854 | Msa0192230:CDS |
| AGAAGCTACTCAATCCATCA+AGG | 0.579693 | 2_1:+7975523 | None:intergenic |
| TAAGCTCTTCAATCTTTCCA+AGG | 0.582836 | 2_1:-7976990 | Msa0192230:CDS |
| GCGGTTATTTACACATGTTG+TGG | 0.587667 | 2_1:-7975346 | Msa0192230:three_prime_UTR |
| AGGTCCGGAAAGAACTGCAC+CGG | 0.591209 | 2_1:+7975487 | None:intergenic |
| AACTTGGTTATTGTGAAGAA+GGG | 0.597761 | 2_1:-7977088 | Msa0192230:CDS |
| GCAGGTACTCCTTGTTTCCG+AGG | 0.602952 | 2_1:-7977187 | Msa0192230:intron |
| GAAGAGTCAAAGGAGTGACC+AGG | 0.604666 | 2_1:+7975866 | None:intergenic |
| TTATACCTCTGTGGAGCAAG+AGG | 0.605499 | 2_1:+7978733 | None:intergenic |
| TACGTCTTCAAAATCACTGG+TGG | 0.606695 | 2_1:-7978813 | Msa0192230:CDS |
| CTTTGGTTGTGAAAGTCCGA+CGG | 0.609736 | 2_1:+7976936 | None:intergenic |
| CTTGTTTCCGAGGACACGGA+AGG | 0.610269 | 2_1:-7977177 | Msa0192230:CDS |
| AGGCTCTCCACCGCTAAGCA+AGG | 0.611423 | 2_1:-7975700 | Msa0192230:CDS |
| GGACAAGAGGATCTCACAAG+AGG | 0.614846 | 2_1:-7978960 | Msa0192230:CDS |
| GCAAGAGGCGAACACGACCA+GGG | 0.615545 | 2_1:+7978748 | None:intergenic |
| GGTTGTGAAAGTCCGACGGT+AGG | 0.616762 | 2_1:+7976940 | None:intergenic |
| TGCAACACCTTGCTTAGCGG+TGG | 0.616816 | 2_1:+7975693 | None:intergenic |
| GGGGTATCTATTGACTGTTG+CGG | 0.620040 | 2_1:-7975365 | Msa0192230:three_prime_UTR |
| CCTCTAGATTGAAGGAGCAG+AGG | 0.621309 | 2_1:-7975759 | Msa0192230:CDS |
| CCTCTGCTCCTTCAATCTAG+AGG | 0.626623 | 2_1:+7975759 | None:intergenic |
| GTTGAAAAGCCAAGAATGAG+GGG | 0.636999 | 2_1:-7977037 | Msa0192230:CDS |
| CAAGGATTTCCAATGAAGCA+GGG | 0.641279 | 2_1:-7978780 | Msa0192230:CDS |
| GAAGAAGGAAGTCTGTTCGT+GGG | 0.645378 | 2_1:-7977141 | Msa0192230:CDS |
| GGTCTCTTGACATATAGTTG+GGG | 0.645550 | 2_1:-7975384 | Msa0192230:three_prime_UTR |
| GAACACAGCAAGTACACGCA+AGG | 0.662556 | 2_1:+7975467 | None:intergenic |
| GTAGAAAGGTTATACCTCTG+TGG | 0.668019 | 2_1:+7978724 | None:intergenic |
| AATTGCCAAAGCAAAATCAG+AGG | 0.670645 | 2_1:-7975806 | Msa0192230:CDS |
| CAAGAGGCGAACACGACCAG+GGG | 0.676279 | 2_1:+7978749 | None:intergenic |
| ACTGGTGGATGTGACAAACA+AGG | 0.694989 | 2_1:-7978798 | Msa0192230:CDS |
| AGTATGTCAACACCTACCGT+CGG | 0.698935 | 2_1:-7976952 | Msa0192230:CDS |
| GGCAACCCAAGTGACAGACA+AGG | 0.707717 | 2_1:+7975306 | None:intergenic |
| GTTCGCCTCTTGCTCCACAG+AGG | 0.710024 | 2_1:-7978738 | Msa0192230:intron |
| TCTTAGCCAAACTCTCACTG+CGG | 0.768400 | 2_1:+7975731 | None:intergenic |
| TAACCAAGTTCAGAACAGAG+AGG | 0.775773 | 2_1:+7977101 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAAAAATAAAAATT+AGG | + | chr2_1:7975576-7975595 | None:intergenic | 0.0% |
| !! | TATATATATATATATAAAAA+TGG | + | chr2_1:7977135-7977154 | None:intergenic | 0.0% |
| !! | TCAATATAACAATTAATTTA+AGG | + | chr2_1:7975698-7975717 | None:intergenic | 10.0% |
| !!! | TTTTATTAATTATTATAGTG+AGG | - | chr2_1:7975901-7975920 | Msa0192230:CDS | 10.0% |
| !! | ATAATTAATATACAAAACAA+AGG | + | chr2_1:7978060-7978079 | None:intergenic | 10.0% |
| !!! | AAAAAAAGATCTAAAATAGA+GGG | + | chr2_1:7976202-7976221 | None:intergenic | 15.0% |
| !!! | TAAAAGTTTTGCTTAAAAAT+TGG | - | chr2_1:7976744-7976763 | Msa0192230:intron | 15.0% |
| !! | CATAATTAACAAAACTAAAA+AGG | + | chr2_1:7977022-7977041 | None:intergenic | 15.0% |
| !! | GATTTATTAATTATGTTGTT+CGG | - | chr2_1:7977065-7977084 | Msa0192230:CDS | 15.0% |
| !! | ATTTATTAATTATGTTGTTC+GGG | - | chr2_1:7977066-7977085 | Msa0192230:CDS | 15.0% |
| !! | TTGTAATAGAATATTATCTA+TGG | - | chr2_1:7978586-7978605 | Msa0192230:intron | 15.0% |
| !! | TATGGATCTATAATTTATAA+TGG | - | chr2_1:7978616-7978635 | Msa0192230:intron | 15.0% |
| !! | ACTGCAAAATAATTTCTATA+TGG | + | chr2_1:7975424-7975443 | None:intergenic | 20.0% |
| !! | AAGGCAATAAAAATTGAAAA+AGG | + | chr2_1:7975523-7975542 | None:intergenic | 20.0% |
| !! | AAACAAAAAAAACTGTAGAA+AGG | + | chr2_1:7975869-7975888 | None:intergenic | 20.0% |
| !! | TGTACTATTATTTGCATTAT+AGG | - | chr2_1:7976080-7976099 | Msa0192230:intron | 20.0% |
| !! | CAAACAGTAATAAAAACAAA+AGG | + | chr2_1:7976140-7976159 | None:intergenic | 20.0% |
| !!! | GAAAAAAAGATCTAAAATAG+AGG | + | chr2_1:7976203-7976222 | None:intergenic | 20.0% |
| !!! | AATTTATTTTGTATGTGTTG+AGG | - | chr2_1:7976247-7976266 | Msa0192230:intron | 20.0% |
| !! | TCTTAAAATAGTATGATACA+AGG | - | chr2_1:7976708-7976727 | Msa0192230:intron | 20.0% |
| !!! | TATGTTTTTTATAATACCAG+CGG | - | chr2_1:7977196-7977215 | Msa0192230:intron | 20.0% |
| !! | ACCAAATAAATACTTAACAA+GGG | + | chr2_1:7977344-7977363 | None:intergenic | 20.0% |
| !! | TACCAAATAAATACTTAACA+AGG | + | chr2_1:7977345-7977364 | None:intergenic | 20.0% |
| !! | ACAAGTGATAAATACTAAAT+AGG | + | chr2_1:7977739-7977758 | None:intergenic | 20.0% |
| !! | AAAAATTCCAACTTAGATAT+TGG | + | chr2_1:7977774-7977793 | None:intergenic | 20.0% |
| !!! | ATCACTTGCTATTATAATAT+AGG | - | chr2_1:7977798-7977817 | Msa0192230:intron | 20.0% |
| !!! | TCACTTGCTATTATAATATA+GGG | - | chr2_1:7977799-7977818 | Msa0192230:intron | 20.0% |
| !!! | ATATTAATTATGCTTTGTTG+TGG | - | chr2_1:7978069-7978088 | Msa0192230:intron | 20.0% |
| !! | GATTTAAAAATAGAATCAGA+GGG | + | chr2_1:7978354-7978373 | None:intergenic | 20.0% |
| !! | AGATTTAAAAATAGAATCAG+AGG | + | chr2_1:7978355-7978374 | None:intergenic | 20.0% |
| !! | AAATAATACTACAAAAACTC+AGG | + | chr2_1:7978945-7978964 | None:intergenic | 20.0% |
| !!! | TTTTAATACTTTGTGTTTGA+TGG | - | chr2_1:7979010-7979029 | Msa0192230:intron | 20.0% |
| ! | CTCAAAGATGATAGAAATTA+GGG | + | chr2_1:7975277-7975296 | None:intergenic | 25.0% |
| ! | ACTCAAAGATGATAGAAATT+AGG | + | chr2_1:7975278-7975297 | None:intergenic | 25.0% |
| ! | CATAATAGCAATGAAATCAA+AGG | + | chr2_1:7975395-7975414 | None:intergenic | 25.0% |
| ! | CTCTTTATCATTTACTTGAA+TGG | - | chr2_1:7976112-7976131 | Msa0192230:intron | 25.0% |
| ! | CAAAATAAATTCACCAGTTT+GGG | + | chr2_1:7976238-7976257 | None:intergenic | 25.0% |
| ! | ACAAAATAAATTCACCAGTT+TGG | + | chr2_1:7976239-7976258 | None:intergenic | 25.0% |
| !!! | CTATTTTAAGAGAGATAGAA+GGG | + | chr2_1:7976699-7976718 | None:intergenic | 25.0% |
| !!! | ACTATTTTAAGAGAGATAGA+AGG | + | chr2_1:7976700-7976719 | None:intergenic | 25.0% |
| !! | AATAACAGAAACGTATTTTC+TGG | + | chr2_1:7976782-7976801 | None:intergenic | 25.0% |
| !!! | TATGTTAGTGGATTTTTTGT+AGG | - | chr2_1:7976958-7976977 | Msa0192230:CDS | 25.0% |
| ! | AATTTAATGTTTGTTTGAGC+AGG | - | chr2_1:7977371-7977390 | Msa0192230:intron | 25.0% |
| !!! | ATAGCTTTGGTTTTGAAAAA+TGG | - | chr2_1:7977700-7977719 | Msa0192230:intron | 25.0% |
| !!! | TCAATTTTTCAAGGATTGAT+GGG | + | chr2_1:7977977-7977996 | None:intergenic | 25.0% |
| !!! | TTCAATTTTTCAAGGATTGA+TGG | + | chr2_1:7977978-7977997 | None:intergenic | 25.0% |
| !! | TAGCTTCTTTCAATTTTTCA+AGG | + | chr2_1:7977986-7978005 | None:intergenic | 25.0% |
| !!! | ACAAAGGTTTTAAGTTTAGT+GGG | + | chr2_1:7978044-7978063 | None:intergenic | 25.0% |
| !!! | AACAAAGGTTTTAAGTTTAG+TGG | + | chr2_1:7978045-7978064 | None:intergenic | 25.0% |
| !!! | GAATATTTAGTTGTTTTGAG+AGG | - | chr2_1:7978204-7978223 | Msa0192230:intron | 25.0% |
| !! | TGTCAATTTGCAATTGTTTT+GGG | + | chr2_1:7978378-7978397 | None:intergenic | 25.0% |
| !! | TTGTCAATTTGCAATTGTTT+TGG | + | chr2_1:7978379-7978398 | None:intergenic | 25.0% |
| ! | AATAATTGTCATAAGTTAGC+TGG | + | chr2_1:7978463-7978482 | None:intergenic | 25.0% |
| ! | ACTTATGACAATTATTACAG+CGG | - | chr2_1:7978467-7978486 | Msa0192230:intron | 25.0% |
| !! | AAAATATCCGCTCTTTTATT+TGG | - | chr2_1:7978498-7978517 | Msa0192230:intron | 25.0% |
| !!! | AAATATCCGCTCTTTTATTT+GGG | - | chr2_1:7978499-7978518 | Msa0192230:intron | 25.0% |
| ! | ATTATCTATGGTCATAACTA+TGG | - | chr2_1:7978598-7978617 | Msa0192230:intron | 25.0% |
| !!! | AGAATTTACTTTTACCTTGA+TGG | - | chr2_1:7979039-7979058 | Msa0192230:intron | 25.0% |
| ! | TACATTGAGAATCTCAAAAA+TGG | + | chr2_1:7979294-7979313 | None:intergenic | 25.0% |
| TTCATTGTGAAATGTGGATT+TGG | + | chr2_1:7975340-7975359 | None:intergenic | 30.0% | |
| AAATCCACATTTCACAATGA+AGG | - | chr2_1:7975339-7975358 | Msa0192230:three_prime_UTR | 30.0% | |
| CAATGAAATCAAAGGAACAA+GGG | + | chr2_1:7975387-7975406 | None:intergenic | 30.0% | |
| AAATCGTGTGAATTGAAGAA+AGG | + | chr2_1:7975542-7975561 | None:intergenic | 30.0% | |
| ! | TAAATTGTAGTCGTGCATTT+TGG | - | chr2_1:7975594-7975613 | Msa0192230:three_prime_UTR | 30.0% |
| ! | AAATTGTAGTCGTGCATTTT+GGG | - | chr2_1:7975595-7975614 | Msa0192230:three_prime_UTR | 30.0% |
| TACTATAAACCCATTTGTGT+TGG | - | chr2_1:7975950-7975969 | Msa0192230:intron | 30.0% | |
| TGTTTGAATTATTCGTTTCC+TGG | - | chr2_1:7976154-7976173 | Msa0192230:intron | 30.0% | |
| ! | TCTAAAATAGAGGGTTAAAC+CGG | + | chr2_1:7976193-7976212 | None:intergenic | 30.0% |
| !! | TGTTCCATACACTTTGATTT+TGG | + | chr2_1:7976334-7976353 | None:intergenic | 30.0% |
| !!! | TCGTTGTTGTTTTCTACTTT+TGG | + | chr2_1:7976368-7976387 | None:intergenic | 30.0% |
| GAAAACAACAACGAAAGAAA+AGG | - | chr2_1:7976374-7976393 | Msa0192230:intron | 30.0% | |
| CGTTACAAAGAGATATCAAT+GGG | - | chr2_1:7976492-7976511 | Msa0192230:intron | 30.0% | |
| TTTGTATAGAGTTTGTCTCT+TGG | + | chr2_1:7976637-7976656 | None:intergenic | 30.0% | |
| GTGAGAGTTAACTTAAAATC+AGG | + | chr2_1:7976936-7976955 | None:intergenic | 30.0% | |
| TATTAATTATGTTGTTCGGG+TGG | - | chr2_1:7977069-7977088 | Msa0192230:CDS | 30.0% | |
| ATTTGGGGGAAAAACATAAA+TGG | + | chr2_1:7977102-7977121 | None:intergenic | 30.0% | |
| GAACCATCTAATATTAGAGA+CGG | + | chr2_1:7977303-7977322 | None:intergenic | 30.0% | |
| GCCCTTGTTAAGTATTTATT+TGG | - | chr2_1:7977340-7977359 | Msa0192230:intron | 30.0% | |
| AACTTGGTTATTGTGAAGAA+GGG | - | chr2_1:7977488-7977507 | Msa0192230:intron | 30.0% | |
| TGTATTATCAACAGAGAATC+AGG | + | chr2_1:7977681-7977700 | None:intergenic | 30.0% | |
| !! | CTGTTGATAATACATAGCTT+TGG | - | chr2_1:7977687-7977706 | Msa0192230:intron | 30.0% |
| !!! | TTGGTTTTGAAAAATGGTCT+TGG | - | chr2_1:7977706-7977725 | Msa0192230:intron | 30.0% |
| ATTGTCTCCAATATCTAAGT+TGG | - | chr2_1:7977764-7977783 | Msa0192230:intron | 30.0% | |
| ATTATAATATAGGGTGAGTC+TGG | - | chr2_1:7977808-7977827 | Msa0192230:intron | 30.0% | |
| CACAAACTCATCTATACAAT+GGG | + | chr2_1:7977917-7977936 | None:intergenic | 30.0% | |
| ! | TTTGTTGTGGTTAGAAGTAT+AGG | - | chr2_1:7978082-7978101 | Msa0192230:intron | 30.0% |
| TGTCGTTAGTTAGTTAACAT+TGG | - | chr2_1:7978135-7978154 | Msa0192230:intron | 30.0% | |
| GTCGTTAGTTAGTTAACATT+GGG | - | chr2_1:7978136-7978155 | Msa0192230:intron | 30.0% | |
| TTAGTTAGTTAACATTGGGA+AGG | - | chr2_1:7978140-7978159 | Msa0192230:intron | 30.0% | |
| CATCTATTTAGCAATCTATC+AGG | + | chr2_1:7978253-7978272 | None:intergenic | 30.0% | |
| AGATTGCTAAATAGATGAAG+TGG | - | chr2_1:7978256-7978275 | Msa0192230:intron | 30.0% | |
| GATTGCTAAATAGATGAAGT+GGG | - | chr2_1:7978257-7978276 | Msa0192230:intron | 30.0% | |
| TTTGACTCTTCAAAGAAAGA+GGG | - | chr2_1:7978722-7978741 | Msa0192230:intron | 30.0% | |
| GTAACCTTCATTGTGAAATG+TGG | + | chr2_1:7975346-7975365 | None:intergenic | 35.0% | |
| CAAAGGAACAAGGGAAATTA+CGG | + | chr2_1:7975378-7975397 | None:intergenic | 35.0% | |
| GCAATGAAATCAAAGGAACA+AGG | + | chr2_1:7975388-7975407 | None:intergenic | 35.0% | |
| CTGAATTAGCCCATCTAAAT+TGG | + | chr2_1:7976038-7976057 | None:intergenic | 35.0% | |
| ! | ACATCAAGTTGTTATTGGTG+TGG | + | chr2_1:7976287-7976306 | None:intergenic | 35.0% |
| ACCAATAACAACTTGATGTG+TGG | - | chr2_1:7976288-7976307 | Msa0192230:intron | 35.0% | |
| ! | TCCACACATCAAGTTGTTAT+TGG | + | chr2_1:7976292-7976311 | None:intergenic | 35.0% |
| GCAACCAAAATCAAAGTGTA+TGG | - | chr2_1:7976327-7976346 | Msa0192230:intron | 35.0% | |
| !! | AAGAATTTGTTGACCCAGTT+CGG | - | chr2_1:7976410-7976429 | Msa0192230:intron | 35.0% |
| ! | CTACTCATCATATAGTGGAA+CGG | + | chr2_1:7976472-7976491 | None:intergenic | 35.0% |
| TAACGCTACTCATCATATAG+TGG | + | chr2_1:7976477-7976496 | None:intergenic | 35.0% | |
| GCGTTACAAAGAGATATCAA+TGG | - | chr2_1:7976491-7976510 | Msa0192230:intron | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr2_1:7976573-7976592 | None:intergenic | 35.0% | |
| AATCCTAATAGTGTTTCCCA+AGG | - | chr2_1:7976581-7976600 | Msa0192230:intron | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | + | chr2_1:7976660-7976679 | None:intergenic | 35.0% | |
| AGAAAGGCAACAACAAAACT+AGG | + | chr2_1:7976661-7976680 | None:intergenic | 35.0% | |
| TAACTCTCACAGTATGTTAG+TGG | - | chr2_1:7976946-7976965 | Msa0192230:CDS | 35.0% | |
| AAATGGCAGCTGACAAATTT+GGG | + | chr2_1:7977118-7977137 | None:intergenic | 35.0% | |
| AAAATGGCAGCTGACAAATT+TGG | + | chr2_1:7977119-7977138 | None:intergenic | 35.0% | |
| !!! | TTTTTTATAATACCAGCGGC+TGG | - | chr2_1:7977200-7977219 | Msa0192230:intron | 35.0% |
| TAATATTAGAGACGGCAAAG+TGG | + | chr2_1:7977295-7977314 | None:intergenic | 35.0% | |
| TTGCCGTCTCTAATATTAGA+TGG | - | chr2_1:7977297-7977316 | Msa0192230:intron | 35.0% | |
| GAACTTGGTTATTGTGAAGA+AGG | - | chr2_1:7977487-7977506 | Msa0192230:intron | 35.0% | |
| ! | TTTTCAACATCAGTCAAACC+AGG | + | chr2_1:7977527-7977546 | None:intergenic | 35.0% |
| ATGTTGAAAAGCCAAGAATG+AGG | - | chr2_1:7977537-7977556 | Msa0192230:intron | 35.0% | |
| TGTTGAAAAGCCAAGAATGA+GGG | - | chr2_1:7977538-7977557 | Msa0192230:intron | 35.0% | |
| ! | ATTGAAGAGCTTACGGATTT+TGG | + | chr2_1:7977579-7977598 | None:intergenic | 35.0% |
| TGGAAAGATTGAAGAGCTTA+CGG | + | chr2_1:7977586-7977605 | None:intergenic | 35.0% | |
| TAAGCTCTTCAATCTTTCCA+AGG | - | chr2_1:7977586-7977605 | Msa0192230:intron | 35.0% | |
| ! | GGAAGAAATTTTACCTGCTT+TGG | + | chr2_1:7977660-7977679 | None:intergenic | 35.0% |
| CCACAAACTCATCTATACAA+TGG | + | chr2_1:7977918-7977937 | None:intergenic | 35.0% | |
| CCATTGTATAGATGAGTTTG+TGG | - | chr2_1:7977915-7977934 | Msa0192230:intron | 35.0% | |
| !! | TTTTCAAGGATTGATGGGAA+GGG | + | chr2_1:7977972-7977991 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGGATTGATGGGA+AGG | + | chr2_1:7977973-7977992 | None:intergenic | 35.0% |
| !!! | GGTTTTAAGTTTAGTGGGAA+GGG | + | chr2_1:7978039-7978058 | None:intergenic | 35.0% |
| !!! | AGGTTTTAAGTTTAGTGGGA+AGG | + | chr2_1:7978040-7978059 | None:intergenic | 35.0% |
| !!! | GGAAAGTAGTTTTGTAATCG+CGG | - | chr2_1:7978168-7978187 | Msa0192230:intron | 35.0% |
| !!! | TGTTTTGAGAGGAAGATTTC+AGG | - | chr2_1:7978215-7978234 | Msa0192230:intron | 35.0% |
| ! | ATATTCCCGTTGCTGTTAAT+AGG | - | chr2_1:7978280-7978299 | Msa0192230:intron | 35.0% |
| TAGTTCCTATTAACAGCAAC+GGG | + | chr2_1:7978288-7978307 | None:intergenic | 35.0% | |
| CTAGTTCCTATTAACAGCAA+CGG | + | chr2_1:7978289-7978308 | None:intergenic | 35.0% | |
| ACAAGAACTGAATTGCAACA+GGG | - | chr2_1:7978324-7978343 | Msa0192230:intron | 35.0% | |
| AGTAGGAAATTAGTTGAGAG+TGG | + | chr2_1:7978439-7978458 | None:intergenic | 35.0% | |
| ATGACAATTATTACAGCGGT+CGG | - | chr2_1:7978471-7978490 | Msa0192230:intron | 35.0% | |
| AAGGAACCCAAATAAAAGAG+CGG | + | chr2_1:7978508-7978527 | None:intergenic | 35.0% | |
| ! | CTCTTTCTTTGAAGAGTCAA+AGG | + | chr2_1:7978723-7978742 | None:intergenic | 35.0% |
| CTTTGACTCTTCAAAGAAAG+AGG | - | chr2_1:7978721-7978740 | Msa0192230:intron | 35.0% | |
| AATTGCCAAAGCAAAATCAG+AGG | - | chr2_1:7978770-7978789 | Msa0192230:CDS | 35.0% | |
| ! | ATCTAGAGGCAAGAAGTTTT+TGG | + | chr2_1:7978806-7978825 | None:intergenic | 35.0% |
| TTGGTCTCTTGACATATAGT+TGG | - | chr2_1:7979190-7979209 | Msa0192230:intron | 35.0% | |
| TGGTCTCTTGACATATAGTT+GGG | - | chr2_1:7979191-7979210 | Msa0192230:intron | 35.0% | |
| !! | CATCGATTTCAAGCTTCTTC+TGG | + | chr2_1:7975475-7975494 | None:intergenic | 40.0% |
| ! | AGGATCTCACAAGAGGTTTT+GGG | - | chr2_1:7975623-7975642 | Msa0192230:three_prime_UTR | 40.0% |
| TTGCTACTCGCAGGAATTTA+AGG | - | chr2_1:7975738-7975757 | Msa0192230:CDS | 40.0% | |
| TGCTACTCGCAGGAATTTAA+GGG | - | chr2_1:7975739-7975758 | Msa0192230:CDS | 40.0% | |
| GGATACGTCTTCAAAATCAC+TGG | - | chr2_1:7975760-7975779 | Msa0192230:CDS | 40.0% | |
| TACGTCTTCAAAATCACTGG+TGG | - | chr2_1:7975763-7975782 | Msa0192230:CDS | 40.0% | |
| ACAAGGATTTCCAATGAAGC+AGG | - | chr2_1:7975795-7975814 | Msa0192230:CDS | 40.0% | |
| CAAGGATTTCCAATGAAGCA+GGG | - | chr2_1:7975796-7975815 | Msa0192230:CDS | 40.0% | |
| GTAGAAAGGTTATACCTCTG+TGG | + | chr2_1:7975855-7975874 | None:intergenic | 40.0% | |
| CCATCATCACCAACACAAAT+GGG | + | chr2_1:7975962-7975981 | None:intergenic | 40.0% | |
| TCTCCGGTTCCAATTTAGAT+GGG | - | chr2_1:7976026-7976045 | Msa0192230:intron | 40.0% | |
| TAGCCCATCTAAATTGGAAC+CGG | + | chr2_1:7976032-7976051 | None:intergenic | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | + | chr2_1:7976468-7976487 | None:intergenic | 40.0% |
| AGGATTGAGTCTCTTGGTTA+CGG | + | chr2_1:7976567-7976586 | None:intergenic | 40.0% | |
| TCACCTTGGGAAACACTATT+AGG | + | chr2_1:7976587-7976606 | None:intergenic | 40.0% | |
| !! | TTTGTGGGTTGATTCACCTT+GGG | + | chr2_1:7976600-7976619 | None:intergenic | 40.0% |
| GCAACAAAACTAGGGTTTGT+GGG | + | chr2_1:7976615-7976634 | None:intergenic | 40.0% | |
| GTCTCTTGGCAACAAAACTA+GGG | + | chr2_1:7976623-7976642 | None:intergenic | 40.0% | |
| TGTCTCTTGGCAACAAAACT+AGG | + | chr2_1:7976624-7976643 | None:intergenic | 40.0% | |
| GCTGAAACAAGGGTTTAGAA+AGG | + | chr2_1:7976677-7976696 | None:intergenic | 40.0% | |
| AGATAGAAGGGCTGAAACAA+GGG | + | chr2_1:7976687-7976706 | None:intergenic | 40.0% | |
| GATGGTTGAAGAATTTCGTG+AGG | + | chr2_1:7976869-7976888 | None:intergenic | 40.0% | |
| ACGAAATTCTTCAACCATCG+TGG | - | chr2_1:7976870-7976889 | Msa0192230:intron | 40.0% | |
| AATGGCAGCTGACAAATTTG+GGG | + | chr2_1:7977117-7977136 | None:intergenic | 40.0% | |
| CAATTAACACGTCAAAGGAG+GGG | + | chr2_1:7977263-7977282 | None:intergenic | 40.0% | |
| GCAATTAACACGTCAAAGGA+GGG | + | chr2_1:7977264-7977283 | None:intergenic | 40.0% | |
| AGCAATTAACACGTCAAAGG+AGG | + | chr2_1:7977265-7977284 | None:intergenic | 40.0% | |
| GTCAGCAATTAACACGTCAA+AGG | + | chr2_1:7977268-7977287 | None:intergenic | 40.0% | |
| TAACCAAGTTCAGAACAGAG+AGG | + | chr2_1:7977478-7977497 | None:intergenic | 40.0% | |
| ! | AAGGGTGAAAATGATTTGCC+TGG | - | chr2_1:7977506-7977525 | Msa0192230:intron | 40.0% |
| GTTGAAAAGCCAAGAATGAG+GGG | - | chr2_1:7977539-7977558 | Msa0192230:intron | 40.0% | |
| ! | TTTCCAAGGATGATGATGTC+AGG | - | chr2_1:7977600-7977619 | Msa0192230:intron | 40.0% |
| TAATATAGGGTGAGTCTGGT+TGG | - | chr2_1:7977812-7977831 | Msa0192230:intron | 40.0% | |
| GTTAACATTGGGAAGGTAGT+TGG | - | chr2_1:7978147-7978166 | Msa0192230:intron | 40.0% | |
| CACAAGAACTGAATTGCAAC+AGG | - | chr2_1:7978323-7978342 | Msa0192230:intron | 40.0% | |
| ATCATGCAAGTCCATGAAAG+CGG | + | chr2_1:7978533-7978552 | None:intergenic | 40.0% | |
| CTTTCATGGACTTGCATGAT+AGG | - | chr2_1:7978533-7978552 | Msa0192230:intron | 40.0% | |
| !! | AGGTTGACTTGTTCTATCTG+AGG | - | chr2_1:7978556-7978575 | Msa0192230:intron | 40.0% |
| TAACACGTATCTGATTGTGC+AGG | - | chr2_1:7978654-7978673 | Msa0192230:intron | 40.0% | |
| AACACGTATCTGATTGTGCA+GGG | - | chr2_1:7978655-7978674 | Msa0192230:intron | 40.0% | |
| ACTTCTTGCCTCTAGATTGA+AGG | - | chr2_1:7978809-7978828 | Msa0192230:CDS | 40.0% | |
| GTTTGGCTAAGAAGAGATCA+AGG | - | chr2_1:7978856-7978875 | Msa0192230:intron | 40.0% | |
| AGAAGCTACTCAATCCATCA+AGG | + | chr2_1:7979056-7979075 | None:intergenic | 40.0% | |
| TACTCGTCTGATGAATCGAT+TGG | - | chr2_1:7979171-7979190 | Msa0192230:intron | 40.0% | |
| GGTCTCTTGACATATAGTTG+GGG | - | chr2_1:7979192-7979211 | Msa0192230:intron | 40.0% | |
| GCGGTTATTTACACATGTTG+TGG | - | chr2_1:7979230-7979249 | Msa0192230:intron | 40.0% | |
| AACGTTGCAAATCCAACCAC+TGG | - | chr2_1:7975446-7975465 | Msa0192230:three_prime_UTR | 45.0% | |
| ! | GAGGATCTCACAAGAGGTTT+TGG | - | chr2_1:7975622-7975641 | Msa0192230:three_prime_UTR | 45.0% |
| !!! | GAGGTTTTGGGTGATGCTTT+AGG | - | chr2_1:7975635-7975654 | Msa0192230:three_prime_UTR | 45.0% |
| ! | ACTGGTGGATGTGACAAACA+AGG | - | chr2_1:7975778-7975797 | Msa0192230:CDS | 45.0% |
| GTTAACACACCCTGCTTCAT+TGG | + | chr2_1:7975808-7975827 | None:intergenic | 45.0% | |
| TTATACCTCTGTGGAGCAAG+AGG | + | chr2_1:7975846-7975865 | None:intergenic | 45.0% | |
| !! | CCCATTTGTGTTGGTGATGA+TGG | - | chr2_1:7975959-7975978 | Msa0192230:intron | 45.0% |
| GCCATCATCACCAACACAAA+TGG | + | chr2_1:7975963-7975982 | None:intergenic | 45.0% | |
| AGATTCAAACCGAAACCTCG+AGG | + | chr2_1:7976007-7976026 | None:intergenic | 45.0% | |
| ! | GGTTTCGGTTTGAATCTCTC+CGG | - | chr2_1:7976010-7976029 | Msa0192230:intron | 45.0% |
| CTCTCCGGTTCCAATTTAGA+TGG | - | chr2_1:7976025-7976044 | Msa0192230:intron | 45.0% | |
| ! | TTATTCGTTTCCTGGTTCGC+TGG | - | chr2_1:7976162-7976181 | Msa0192230:intron | 45.0% |
| ! | TATTCGTTTCCTGGTTCGCT+GGG | - | chr2_1:7976163-7976182 | Msa0192230:intron | 45.0% |
| CACTTATACGAGACCCAAAC+TGG | - | chr2_1:7976222-7976241 | Msa0192230:intron | 45.0% | |
| ACAACTTGATGTGTGGAGCA+AGG | - | chr2_1:7976295-7976314 | Msa0192230:intron | 45.0% | |
| CAACTTGATGTGTGGAGCAA+GGG | - | chr2_1:7976296-7976315 | Msa0192230:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | + | chr2_1:7976426-7976445 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | + | chr2_1:7976427-7976446 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | - | chr2_1:7976431-7976450 | Msa0192230:intron | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | - | chr2_1:7976432-7976451 | Msa0192230:intron | 45.0% | |
| TCCAAATTGACCTAGTCTGG+GGG | - | chr2_1:7976433-7976452 | Msa0192230:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | + | chr2_1:7976469-7976488 | None:intergenic | 45.0% |
| GGATTTGGGTAGAATTAGGC+GGG | + | chr2_1:7976534-7976553 | None:intergenic | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | + | chr2_1:7976535-7976554 | None:intergenic | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | + | chr2_1:7976538-7976557 | None:intergenic | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | + | chr2_1:7976566-7976585 | None:intergenic | 45.0% | |
| !! | GTTTGTGGGTTGATTCACCT+TGG | + | chr2_1:7976601-7976620 | None:intergenic | 45.0% |
| GGCAACAAAACTAGGGTTTG+TGG | + | chr2_1:7976616-7976635 | None:intergenic | 45.0% | |
| GAGATAGAAGGGCTGAAACA+AGG | + | chr2_1:7976688-7976707 | None:intergenic | 45.0% | |
| ! | TGGATTTTTCGTGCCACGAT+GGG | + | chr2_1:7976838-7976857 | None:intergenic | 45.0% |
| AATTTCGTGAGGCAAGTCAC+TGG | + | chr2_1:7976858-7976877 | None:intergenic | 45.0% | |
| ATGGCAGCTGACAAATTTGG+GGG | + | chr2_1:7977116-7977135 | None:intergenic | 45.0% | |
| TGACGTGTTAATTGCTGACC+TGG | - | chr2_1:7977269-7977288 | Msa0192230:intron | 45.0% | |
| GAAGAAGGAAGTCTGTTCGT+GGG | - | chr2_1:7977435-7977454 | Msa0192230:intron | 45.0% | |
| AGTTCAGAACAGAGAGGTCT+GGG | + | chr2_1:7977472-7977491 | None:intergenic | 45.0% | |
| AAGTTCAGAACAGAGAGGTC+TGG | + | chr2_1:7977473-7977492 | None:intergenic | 45.0% | |
| ! | AGACCTCTCTGTTCTGAACT+TGG | - | chr2_1:7977472-7977491 | Msa0192230:intron | 45.0% |
| !! | CGGATTTTGGAAGCTCTCTT+AGG | + | chr2_1:7977566-7977585 | None:intergenic | 45.0% |
| CTTCCTGACATCATCATCCT+TGG | + | chr2_1:7977606-7977625 | None:intergenic | 45.0% | |
| AGTATGTCAACACCTACCGT+CGG | - | chr2_1:7977624-7977643 | Msa0192230:intron | 45.0% | |
| CTTTGGTTGTGAAAGTCCGA+CGG | + | chr2_1:7977643-7977662 | None:intergenic | 45.0% | |
| ! | GTGGAGCAAGACTGTACTTT+TGG | - | chr2_1:7977934-7977953 | Msa0192230:intron | 45.0% |
| TAGTGGGAAGGGATAGAAGT+CGG | + | chr2_1:7978028-7978047 | None:intergenic | 45.0% | |
| GTCATAAGTTAGCTGGCAGT+AGG | + | chr2_1:7978456-7978475 | None:intergenic | 45.0% | |
| TCATGCAAGTCCATGAAAGC+GGG | + | chr2_1:7978532-7978551 | None:intergenic | 45.0% | |
| TCATGGACTTGCATGATAGG+AGG | - | chr2_1:7978536-7978555 | Msa0192230:intron | 45.0% | |
| ! | TGCTGCCTCTGATTTTGCTT+TGG | + | chr2_1:7978778-7978797 | None:intergenic | 45.0% |
| CTCTAGATTGAAGGAGCAGA+GGG | - | chr2_1:7978818-7978837 | Msa0192230:CDS | 45.0% | |
| TCTTAGCCAAACTCTCACTG+CGG | + | chr2_1:7978848-7978867 | None:intergenic | 45.0% | |
| GCTTCTTGATCTCTTCTCAC+CGG | - | chr2_1:7979070-7979089 | Msa0192230:intron | 45.0% | |
| ! | GGGGTATCTATTGACTGTTG+CGG | - | chr2_1:7979211-7979230 | Msa0192230:intron | 45.0% |
| GACAAGGCTACAAACACAAC+AGG | + | chr2_1:7979257-7979276 | None:intergenic | 45.0% | |
| !! | TTGTAGCCTTGTCTGTCACT+TGG | - | chr2_1:7979264-7979283 | Msa0192230:five_prime_UTR | 45.0% |
| !! | TGTAGCCTTGTCTGTCACTT+GGG | - | chr2_1:7979265-7979284 | Msa0192230:five_prime_UTR | 45.0% |
| GAGCTTCTTCGTTCGCGATA+CGG | + | chr2_1:7975313-7975332 | None:intergenic | 50.0% | |
| TTCTTCTGGCAACCAGTGGT+TGG | + | chr2_1:7975461-7975480 | None:intergenic | 50.0% | |
| AAGCTTCTTCTGGCAACCAG+TGG | + | chr2_1:7975465-7975484 | None:intergenic | 50.0% | |
| !!! | GTCGTGCATTTTGGGACAAG+AGG | - | chr2_1:7975603-7975622 | Msa0192230:three_prime_UTR | 50.0% |
| GGACAAGAGGATCTCACAAG+AGG | - | chr2_1:7975616-7975635 | Msa0192230:three_prime_UTR | 50.0% | |
| ! | TGCGTGATTTTGCTACTCGC+AGG | - | chr2_1:7975729-7975748 | Msa0192230:CDS | 50.0% |
| !! | TGGTGATGATGGCTTGACCT+TGG | - | chr2_1:7975970-7975989 | Msa0192230:intron | 50.0% |
| TTCAAACCGAAACCTCGAGG+AGG | + | chr2_1:7976004-7976023 | None:intergenic | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | - | chr2_1:7976430-7976449 | Msa0192230:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | + | chr2_1:7976437-7976456 | None:intergenic | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | + | chr2_1:7976560-7976579 | None:intergenic | 50.0% | |
| ! | GGATTTTTCGTGCCACGATG+GGG | + | chr2_1:7976837-7976856 | None:intergenic | 50.0% |
| ! | CTGGATTTTTCGTGCCACGA+TGG | + | chr2_1:7976839-7976858 | None:intergenic | 50.0% |
| ! | ACTCCTTGTTTCCGAGGACA+CGG | - | chr2_1:7977395-7977414 | Msa0192230:intron | 50.0% |
| CGAAGAAGGAAGTCTGTTCG+TGG | - | chr2_1:7977434-7977453 | Msa0192230:intron | 50.0% | |
| CTCTTAGGACCCCTCATTCT+TGG | + | chr2_1:7977551-7977570 | None:intergenic | 50.0% | |
| CGGACTTTCACAACCAAAGC+AGG | - | chr2_1:7977644-7977663 | Msa0192230:intron | 50.0% | |
| CAAGTCCATGAAAGCGGGAA+AGG | + | chr2_1:7978527-7978546 | None:intergenic | 50.0% | |
| ! | TGACCAGGCGCTGTATCTTT+GGG | + | chr2_1:7978698-7978717 | None:intergenic | 50.0% |
| GAAGAGTCAAAGGAGTGACC+AGG | + | chr2_1:7978713-7978732 | None:intergenic | 50.0% | |
| CCTCTGCTCCTTCAATCTAG+AGG | + | chr2_1:7978820-7978839 | None:intergenic | 50.0% | |
| CCTCTAGATTGAAGGAGCAG+AGG | - | chr2_1:7978817-7978836 | Msa0192230:CDS | 50.0% | |
| GAACACAGCAAGTACACGCA+AGG | + | chr2_1:7979112-7979131 | None:intergenic | 50.0% | |
| AAGCAGGGTGTGTTAACCCC+TGG | - | chr2_1:7975811-7975830 | Msa0192230:CDS | 55.0% | |
| AGTGCTCCTCCTCGAGGTTT+CGG | - | chr2_1:7975995-7976014 | Msa0192230:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | + | chr2_1:7976548-7976567 | None:intergenic | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | + | chr2_1:7976549-7976568 | None:intergenic | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | + | chr2_1:7976555-7976574 | None:intergenic | 55.0% | |
| TCTTGGTTACGGGAAGAGGC+TGG | + | chr2_1:7976556-7976575 | None:intergenic | 55.0% | |
| CTCAAATAGTCACCAGCCGC+TGG | + | chr2_1:7977215-7977234 | None:intergenic | 55.0% | |
| AACACGTCAAAGGAGGGGAG+TGG | + | chr2_1:7977258-7977277 | None:intergenic | 55.0% | |
| TTAGAGACGGCAAAGTGGCC+AGG | + | chr2_1:7977290-7977309 | None:intergenic | 55.0% | |
| ! | GCAGGTACTCCTTGTTTCCG+AGG | - | chr2_1:7977389-7977408 | Msa0192230:intron | 55.0% |
| CTTCCGTGTCCTCGGAAACA+AGG | + | chr2_1:7977401-7977420 | None:intergenic | 55.0% | |
| CTTGTTTCCGAGGACACGGA+AGG | - | chr2_1:7977399-7977418 | Msa0192230:intron | 55.0% | |
| GGTTGTGAAAGTCCGACGGT+AGG | + | chr2_1:7977639-7977658 | None:intergenic | 55.0% | |
| GGGTTCCTTTCCCGCTTTCA+TGG | - | chr2_1:7978519-7978538 | Msa0192230:intron | 55.0% | |
| ! | GACCAGGCGCTGTATCTTTG+GGG | + | chr2_1:7978697-7978716 | None:intergenic | 55.0% |
| ! | GTGACCAGGCGCTGTATCTT+TGG | + | chr2_1:7978699-7978718 | None:intergenic | 55.0% |
| TGCAACACCTTGCTTAGCGG+TGG | + | chr2_1:7978886-7978905 | None:intergenic | 55.0% | |
| CGCTGCAACACCTTGCTTAG+CGG | + | chr2_1:7978889-7978908 | None:intergenic | 55.0% | |
| CTCACCGGTGCAGTTCTTTC+CGG | - | chr2_1:7979085-7979104 | Msa0192230:intron | 55.0% | |
| AGGTCCGGAAAGAACTGCAC+CGG | + | chr2_1:7979092-7979111 | None:intergenic | 55.0% | |
| CAGCAAGTACACGCAAGGTC+CGG | + | chr2_1:7979107-7979126 | None:intergenic | 55.0% | |
| GGCAACCCAAGTGACAGACA+AGG | + | chr2_1:7979273-7979292 | None:intergenic | 55.0% | |
| CAAGAGGCGAACACGACCAG+GGG | + | chr2_1:7975830-7975849 | None:intergenic | 60.0% | |
| GCAAGAGGCGAACACGACCA+GGG | + | chr2_1:7975831-7975850 | None:intergenic | 60.0% | |
| AGCAAGAGGCGAACACGACC+AGG | + | chr2_1:7975832-7975851 | None:intergenic | 60.0% | |
| GTTCGCCTCTTGCTCCACAG+AGG | - | chr2_1:7975838-7975857 | Msa0192230:CDS | 60.0% | |
| !! | TCGAGGAGGAGCACTCTCCA+AGG | + | chr2_1:7975990-7976009 | None:intergenic | 60.0% |
| !! | TTGGAGAGTGCTCCTCCTCG+AGG | - | chr2_1:7975989-7976008 | Msa0192230:intron | 60.0% |
| AACGTGGCACGATGGTGTGC+TGG | + | chr2_1:7976810-7976829 | None:intergenic | 60.0% | |
| GGAGAAGCAACGTGCCACGA+TGG | + | chr2_1:7976887-7976906 | None:intergenic | 60.0% | |
| GGCACGTTGCTTCTCCATCG+TGG | - | chr2_1:7976891-7976910 | Msa0192230:intron | 60.0% | |
| GCAGAAGCAACGTGCCACGA+TGG | + | chr2_1:7976908-7976927 | None:intergenic | 60.0% | |
| GTCAAAGGAGGGGAGTGGCA+GGG | + | chr2_1:7977253-7977272 | None:intergenic | 60.0% | |
| CATTGCGCCTTCCGTGTCCT+CGG | + | chr2_1:7977409-7977428 | None:intergenic | 60.0% | |
| GGCGCAATGGAGAGCGAAGA+AGG | - | chr2_1:7977420-7977439 | Msa0192230:intron | 60.0% | |
| AGCCCCAAAGATACAGCGCC+TGG | - | chr2_1:7978692-7978711 | Msa0192230:intron | 60.0% | |
| GGAACGCCGCAGTGAGAGTT+TGG | - | chr2_1:7978839-7978858 | Msa0192230:intron | 60.0% | |
| AGGCTCTCCACCGCTAAGCA+AGG | - | chr2_1:7978876-7978895 | Msa0192230:intron | 60.0% | |
| ! | TCCTGGTTCGCTGGGCTGTC+CGG | - | chr2_1:7976171-7976190 | Msa0192230:intron | 65.0% |
| GCTGCTCTCTCCCCCAGACT+AGG | + | chr2_1:7976446-7976465 | None:intergenic | 65.0% | |
| AGTGGCAGGGCAACGTGAGG+CGG | + | chr2_1:7977240-7977259 | None:intergenic | 65.0% | |
| CGTCAAAGGAGGGGAGTGGC+AGG | + | chr2_1:7977254-7977273 | None:intergenic | 65.0% | |
| ! | CGAGGACACGGAAGGCGCAA+TGG | - | chr2_1:7977407-7977426 | Msa0192230:intron | 65.0% |
| ACCGGACAGCCCAGCGAACC+AGG | + | chr2_1:7976175-7976194 | None:intergenic | 70.0% | |
| GGGGTCGCAACGTGGCACGA+TGG | + | chr2_1:7976818-7976837 | None:intergenic | 70.0% | |
| GCCACGTTGCGACCCCATCG+TGG | - | chr2_1:7976822-7976841 | Msa0192230:intron | 70.0% | |
| GCCACGATGGGGTCGCAACG+TGG | + | chr2_1:7976826-7976845 | None:intergenic | 70.0% | |
| TGGCAGGGCAACGTGAGGCG+GGG | + | chr2_1:7977238-7977257 | None:intergenic | 70.0% | |
| GTGGCAGGGCAACGTGAGGC+GGG | + | chr2_1:7977239-7977258 | None:intergenic | 70.0% | |
| GGGAGTGGCAGGGCAACGTG+AGG | + | chr2_1:7977243-7977262 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 7975268 | 7979330 | 7975268 | ID=Msa0192230;Name=Msa0192230 |
| chr2_1 | mRNA | 7975268 | 7979330 | 7975268 | ID=Msa0192230-mRNA-1;Parent=Msa0192230;Name=Msa0192230-mRNA-1;_AED=0.04;_eAED=0.04;_QI=87|1|1|1|1|1|6|419|248 |
| chr2_1 | exon | 7975268 | 7975922 | 7975268 | ID=Msa0192230-mRNA-1:exon:3684;Parent=Msa0192230-mRNA-1 |
| chr2_1 | exon | 7976933 | 7977205 | 7976933 | ID=Msa0192230-mRNA-1:exon:3683;Parent=Msa0192230-mRNA-1 |
| chr2_1 | exon | 7978739 | 7978847 | 7978739 | ID=Msa0192230-mRNA-1:exon:3682;Parent=Msa0192230-mRNA-1 |
| chr2_1 | exon | 7978937 | 7978994 | 7978937 | ID=Msa0192230-mRNA-1:exon:3681;Parent=Msa0192230-mRNA-1 |
| chr2_1 | exon | 7979091 | 7979155 | 7979091 | ID=Msa0192230-mRNA-1:exon:3680;Parent=Msa0192230-mRNA-1 |
| chr2_1 | exon | 7979238 | 7979330 | 7979238 | ID=Msa0192230-mRNA-1:exon:3679;Parent=Msa0192230-mRNA-1 |
| chr2_1 | five_prime_UTR | 7979244 | 7979330 | 7979244 | ID=Msa0192230-mRNA-1:five_prime_utr;Parent=Msa0192230-mRNA-1 |
| chr2_1 | CDS | 7979238 | 7979243 | 7979238 | ID=Msa0192230-mRNA-1:cds;Parent=Msa0192230-mRNA-1 |
| chr2_1 | CDS | 7979091 | 7979155 | 7979091 | ID=Msa0192230-mRNA-1:cds;Parent=Msa0192230-mRNA-1 |
| chr2_1 | CDS | 7978937 | 7978994 | 7978937 | ID=Msa0192230-mRNA-1:cds;Parent=Msa0192230-mRNA-1 |
| chr2_1 | CDS | 7978739 | 7978847 | 7978739 | ID=Msa0192230-mRNA-1:cds;Parent=Msa0192230-mRNA-1 |
| chr2_1 | CDS | 7976933 | 7977205 | 7976933 | ID=Msa0192230-mRNA-1:cds;Parent=Msa0192230-mRNA-1 |
| chr2_1 | CDS | 7975687 | 7975922 | 7975687 | ID=Msa0192230-mRNA-1:cds;Parent=Msa0192230-mRNA-1 |
| chr2_1 | three_prime_UTR | 7975268 | 7975686 | 7975268 | ID=Msa0192230-mRNA-1:three_prime_utr;Parent=Msa0192230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
