Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781310 | XP_003617067.1 | 86.631 | 561 | 3 | 2 | 1 | 489 | 1 | 561 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781310 | sp|Q9SF16|TCPH_ARATH | 79.888 | 537 | 36 | 2 | 1 | 465 | 1 | 537 | 0.0 | 824 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781310 | G7K2W1 | 86.631 | 561 | 3 | 2 | 1 | 489 | 1 | 561 | 0.0 | 951 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617540 | Msa0781310 | 0.829289 | 5.593461e-55 | -8.615850e-47 |
| Msa0717380 | Msa0781310 | 0.820704 | 5.960063e-53 | -8.615850e-47 |
| Msa0781310 | Msa0783630 | 0.809875 | 1.524295e-50 | -8.615850e-47 |
| Msa0781310 | Msa0786660 | 0.832447 | 9.405099e-56 | -8.615850e-47 |
| Msa0781310 | Msa0788380 | 0.810066 | 1.386284e-50 | -8.615850e-47 |
| Msa0781310 | Msa0799830 | 0.820738 | 5.853765e-53 | -8.615850e-47 |
| Msa0781310 | Msa0822580 | 0.810949 | 8.936328e-51 | -8.615850e-47 |
| Msa0781310 | Msa0860860 | 0.961568 | 7.475948e-120 | -8.615850e-47 |
| Msa0781310 | Msa1037290 | 0.814110 | 1.819940e-51 | -8.615850e-47 |
| Msa0781310 | Msa1040160 | 0.823433 | 1.388866e-53 | -8.615850e-47 |
| Msa0781310 | Msa1058700 | 0.804736 | 1.871769e-49 | -8.615850e-47 |
| Msa0781310 | Msa1082170 | 0.823349 | 1.453390e-53 | -8.615850e-47 |
| Msa0781310 | Msa1083370 | 0.807005 | 6.244544e-50 | -8.615850e-47 |
| Msa0781310 | Msa1089220 | 0.828570 | 8.352576e-55 | -8.615850e-47 |
| Msa0781310 | Msa1195290 | 0.808746 | 2.661247e-50 | -8.615850e-47 |
| Msa0781310 | Msa1218170 | 0.851776 | 7.120560e-61 | -8.615850e-47 |
| Msa0781310 | Msa1240270 | 0.802369 | 5.798030e-49 | -8.615850e-47 |
| Msa0781310 | Msa1332250 | 0.832609 | 8.572031e-56 | -8.615850e-47 |
| Msa0781310 | Msa1368920 | 0.813886 | 2.039394e-51 | -8.615850e-47 |
| Msa0781310 | Msa1374240 | 0.803505 | 3.376972e-49 | -8.615850e-47 |
| Msa0781310 | Msa1426370 | 0.807239 | 5.570619e-50 | -8.615850e-47 |
| Msa0138890 | Msa0781310 | 0.862705 | 4.192951e-64 | -8.615850e-47 |
| Msa0210360 | Msa0781310 | 0.802215 | 6.236122e-49 | -8.615850e-47 |
| Msa0382210 | Msa0781310 | 0.806484 | 8.042394e-50 | -8.615850e-47 |
| Msa0265250 | Msa0781310 | 0.831968 | 1.235281e-55 | -8.615850e-47 |
| Msa0297830 | Msa0781310 | 0.814356 | 1.606253e-51 | -8.615850e-47 |
| Msa0302030 | Msa0781310 | 0.807112 | 5.927121e-50 | -8.615850e-47 |
| Msa0335840 | Msa0781310 | 0.820772 | 5.749342e-53 | -8.615850e-47 |
| Msa0596370 | Msa0781310 | 0.832167 | 1.103013e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781310 | MtrunA17_Chr5g0440381 | 86.631 | 561 | 3 | 2 | 1 | 489 | 1 | 561 | 0.0 | 951 |
| Msa0781310 | MtrunA17_Chr8g0380331 | 33.333 | 528 | 260 | 12 | 21 | 460 | 17 | 540 | 1.58e-75 | 247 |
| Msa0781310 | MtrunA17_Chr7g0241881 | 32.634 | 524 | 260 | 12 | 11 | 454 | 6 | 516 | 3.99e-71 | 235 |
| Msa0781310 | MtrunA17_Chr7g0272821 | 32.177 | 519 | 269 | 10 | 11 | 454 | 6 | 516 | 1.22e-70 | 234 |
| Msa0781310 | MtrunA17_Chr2g0282161 | 29.205 | 541 | 294 | 9 | 5 | 464 | 1 | 533 | 2.47e-69 | 231 |
| Msa0781310 | MtrunA17_Chr3g0123341 | 27.221 | 529 | 297 | 10 | 6 | 454 | 10 | 530 | 9.12e-51 | 181 |
| Msa0781310 | MtrunA17_Chr1g0160221 | 25.483 | 518 | 307 | 12 | 11 | 454 | 11 | 523 | 4.08e-44 | 163 |
| Msa0781310 | MtrunA17_Chr3g0139481 | 28.602 | 465 | 275 | 12 | 27 | 454 | 28 | 472 | 1.05e-42 | 157 |
| Msa0781310 | MtrunA17_Chr6g0461541 | 25.290 | 518 | 308 | 11 | 11 | 454 | 8 | 520 | 2.14e-42 | 158 |
| Msa0781310 | MtrunA17_Chr7g0214841 | 23.314 | 519 | 299 | 10 | 25 | 455 | 19 | 526 | 8.43e-31 | 125 |
| Msa0781310 | MtrunA17_Chr8g0392171 | 27.957 | 279 | 156 | 11 | 178 | 422 | 10 | 277 | 1.77e-20 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781310 | AT3G11830.1 | 79.888 | 537 | 36 | 2 | 1 | 465 | 1 | 537 | 0.0 | 824 |
| Msa0781310 | AT3G11830.2 | 79.516 | 537 | 36 | 3 | 1 | 465 | 1 | 535 | 0.0 | 815 |
| Msa0781310 | AT3G20050.1 | 32.276 | 536 | 272 | 11 | 17 | 465 | 13 | 544 | 2.51e-76 | 249 |
| Msa0781310 | AT5G20890.1 | 31.538 | 520 | 271 | 11 | 11 | 454 | 6 | 516 | 1.53e-69 | 231 |
| Msa0781310 | AT5G26360.1 | 29.205 | 541 | 294 | 10 | 5 | 464 | 1 | 533 | 9.79e-64 | 216 |
| Msa0781310 | AT1G24510.1 | 26.177 | 531 | 304 | 10 | 6 | 456 | 10 | 532 | 7.81e-49 | 176 |
| Msa0781310 | AT3G03960.1 | 25.237 | 527 | 311 | 13 | 5 | 454 | 6 | 526 | 4.68e-44 | 163 |
| Msa0781310 | AT1G24510.3 | 24.580 | 476 | 272 | 9 | 60 | 456 | 12 | 479 | 1.17e-36 | 141 |
| Msa0781310 | AT1G24510.2 | 24.709 | 429 | 258 | 8 | 85 | 456 | 36 | 456 | 2.35e-32 | 129 |
| Msa0781310 | AT3G02530.1 | 22.266 | 512 | 305 | 8 | 29 | 455 | 23 | 526 | 9.53e-31 | 125 |
| Msa0781310 | AT5G16070.1 | 22.505 | 511 | 304 | 9 | 29 | 455 | 23 | 525 | 2.62e-28 | 118 |
| Msa0781310 | AT3G18190.1 | 35.676 | 185 | 115 | 3 | 271 | 454 | 352 | 533 | 5.24e-27 | 114 |
| Msa0781310 | AT3G18190.1 | 34.466 | 206 | 104 | 4 | 27 | 205 | 32 | 233 | 6.45e-26 | 111 |
Find 143 sgRNAs with CRISPR-Local
Find 543 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGAAGAGAGAGAGTTATT+AGG | 0.187281 | 5_2:-63777734 | None:intergenic |
| ACACTTTCTTCAAAACTTAT+AGG | 0.194659 | 5_2:+63779444 | Msa0781310:CDS |
| ATTCATTTGCCAACTTTGTC+TGG | 0.204932 | 5_2:+63784630 | Msa0781310:CDS |
| CTTATTTGCTTGAAGGTTCT+TGG | 0.219293 | 5_2:+63782192 | Msa0781310:intron |
| AGGAAGAGAGAGAGTTATTA+GGG | 0.227511 | 5_2:-63777733 | None:intergenic |
| AAAATTTAATACGGAGTTAT+AGG | 0.246244 | 5_2:+63779211 | Msa0781310:CDS |
| TAGCCTTATGTAGTAATCTA+TGG | 0.260009 | 5_2:+63786513 | Msa0781310:three_prime_UTR |
| AAAGGAATTCTTTGCATCTA+TGG | 0.289996 | 5_2:+63779473 | Msa0781310:CDS |
| TGCCACTGGATGTATGTTTC+TGG | 0.292353 | 5_2:+63786228 | Msa0781310:three_prime_UTR |
| GAAATATTGGCACCTTATTT+CGG | 0.304281 | 5_2:-63781585 | None:intergenic |
| AAAAGAGTTGCTGCTGCAAC+TGG | 0.305439 | 5_2:+63782051 | Msa0781310:CDS |
| GAAGGTGAGGGTGCTCCATT+TGG | 0.310401 | 5_2:+63784578 | Msa0781310:intron |
| CAGAAACACGCGCTTCCTTC+TGG | 0.317305 | 5_2:+63783562 | Msa0781310:CDS |
| TGGTATGAAATGGTAATATT+GGG | 0.318845 | 5_2:+63786295 | Msa0781310:three_prime_UTR |
| TTTATCTACAGATGTTGATA+TGG | 0.326864 | 5_2:+63786275 | Msa0781310:three_prime_UTR |
| GAGGGGTTGAATTTATTAGA+TGG | 0.333080 | 5_2:+63786408 | Msa0781310:three_prime_UTR |
| ATGGTATGAAATGGTAATAT+TGG | 0.350835 | 5_2:+63786294 | Msa0781310:three_prime_UTR |
| AGAAAGAAAATGCCGAAATA+AGG | 0.352104 | 5_2:+63781573 | Msa0781310:CDS |
| AAGGTGAGGGTGCTCCATTT+GGG | 0.365916 | 5_2:+63784579 | Msa0781310:intron |
| TGCTACAGAGGCAGCTTGCC+TGG | 0.375773 | 5_2:+63784772 | Msa0781310:CDS |
| ATGCAATCATGATTGTTAGA+AGG | 0.376275 | 5_2:+63782464 | Msa0781310:CDS |
| GAGCTAGCTGTTAGCATTGA+GGG | 0.383111 | 5_2:+63779372 | Msa0781310:CDS |
| CTGATCAAACTAGGATTTGA+TGG | 0.387094 | 5_2:+63786335 | Msa0781310:three_prime_UTR |
| CAGCATTGTCACATAATTGC+CGG | 0.405508 | 5_2:-63783504 | None:intergenic |
| TTGTGCGTGCATGCTGCCTT+AGG | 0.406875 | 5_2:-63782643 | None:intergenic |
| CAGCATGCACGCACAATAGC+TGG | 0.407586 | 5_2:+63782650 | Msa0781310:CDS |
| TTCACTCTCAAAATTTAATA+CGG | 0.412053 | 5_2:+63779202 | Msa0781310:CDS |
| AAACTCATCCACGATGATAA+AGG | 0.412205 | 5_2:+63778014 | Msa0781310:CDS |
| TTGCAATTGGGACTGATGAT+AGG | 0.412581 | 5_2:+63779511 | Msa0781310:CDS |
| GAAGAACTATGGTGGCTGTT+TGG | 0.419517 | 5_2:-63782287 | None:intergenic |
| AGCAATATCAACTAAGATCT+TGG | 0.420275 | 5_2:-63778102 | None:intergenic |
| TATCTAAATACTTAGTGTTA+AGG | 0.421493 | 5_2:-63786472 | None:intergenic |
| GGAGGCAGAGGTCGCGGAGG+TGG | 0.424216 | 5_2:+63786108 | Msa0781310:CDS |
| GAAGAGAAGAAAAGTTTGCT+TGG | 0.426567 | 5_2:+63779405 | Msa0781310:CDS |
| GGCTCCACCACGAAGAACTA+TGG | 0.429012 | 5_2:-63782298 | None:intergenic |
| GTGGACGCTGTAATTGCAAT+TGG | 0.430540 | 5_2:+63779498 | Msa0781310:CDS |
| ATCTTCAATGGATGTCCATC+TGG | 0.432018 | 5_2:+63782264 | Msa0781310:CDS |
| ATATGAAAATGTCTTCTTGA+AGG | 0.433340 | 5_2:-63781471 | None:intergenic |
| TTCATTTGCCAACTTTGTCT+GGG | 0.434603 | 5_2:+63784631 | Msa0781310:CDS |
| GATGATAGGTTAAACATGAT+TGG | 0.435001 | 5_2:+63779525 | Msa0781310:CDS |
| TCTTCGTGGTGGAGCCGATC+AGG | 0.435496 | 5_2:+63782305 | Msa0781310:CDS |
| TTTATTAGATGGCTGTTGTT+GGG | 0.438626 | 5_2:+63786419 | Msa0781310:three_prime_UTR |
| AGCCTCTCCTTGTGCACTCT+CGG | 0.442120 | 5_2:-63786070 | None:intergenic |
| ATGGTAATATTGGGGATTCT+AGG | 0.449197 | 5_2:+63786304 | Msa0781310:three_prime_UTR |
| AGTAGCGCCGTCGTTAGAAA+TGG | 0.453461 | 5_2:-63778045 | None:intergenic |
| ATTCTTTGCATCTATGGTTG+TGG | 0.462064 | 5_2:+63779479 | Msa0781310:CDS |
| TGTAATATGCGCAATGCCAC+TGG | 0.462560 | 5_2:+63786214 | Msa0781310:three_prime_UTR |
| GGTTTCCGTGGCCGTGGACG+AGG | 0.463717 | 5_2:+63786129 | Msa0781310:CDS |
| CACCCTAGGTCCTCGCGGTA+TGG | 0.466201 | 5_2:+63777989 | Msa0781310:CDS |
| CGTGACTCATTTCTTGTCAA+TGG | 0.467306 | 5_2:+63781443 | Msa0781310:CDS |
| TTTGGATCGAGAAACTTCTT+GGG | 0.472807 | 5_2:-63781512 | None:intergenic |
| ATCAACTAAGATCTTGGCAG+CGG | 0.472906 | 5_2:-63778096 | None:intergenic |
| ACTATTACTTAATGTTGAGT+TGG | 0.473212 | 5_2:+63781538 | Msa0781310:CDS |
| GAGAGATTCAACATCTTCAA+TGG | 0.474859 | 5_2:+63782252 | Msa0781310:CDS |
| TTCCCATAGATTACTACATA+AGG | 0.479151 | 5_2:-63786516 | None:intergenic |
| GCAAAGCCTTTCATTGAAGA+TGG | 0.481903 | 5_2:+63779177 | Msa0781310:CDS |
| AAAACTTATAGGCGGAGAAA+AGG | 0.483886 | 5_2:+63779455 | Msa0781310:CDS |
| ATTTATTAGATGGCTGTTGT+TGG | 0.484825 | 5_2:+63786418 | Msa0781310:three_prime_UTR |
| GTGGCTATGTCGACCCCAAA+TGG | 0.487755 | 5_2:-63784593 | None:intergenic |
| TTCAACCATGTCTTCTATGC+TGG | 0.488113 | 5_2:+63777770 | Msa0781310:exon |
| TGGAAATAAGCCGGTACCTA+AGG | 0.491090 | 5_2:+63782627 | Msa0781310:CDS |
| AGCATTGTCACATAATTGCC+GGG | 0.495335 | 5_2:-63783503 | None:intergenic |
| TGTGTTACCTTTACAACTGC+AGG | 0.496824 | 5_2:-63784656 | None:intergenic |
| AAGAATTCAACTGTAGTTGC+TGG | 0.502547 | 5_2:+63782493 | Msa0781310:CDS |
| CTGGGAGCCTGCAGTTGTAA+AGG | 0.504005 | 5_2:+63784649 | Msa0781310:CDS |
| TCCGCGACCTCTGCCTCCCA+TGG | 0.505514 | 5_2:-63786103 | None:intergenic |
| TTATTAGATGGCTGTTGTTG+GGG | 0.507293 | 5_2:+63786420 | Msa0781310:three_prime_UTR |
| AGAGGCTGCTGCAAGTGCCA+TGG | 0.507829 | 5_2:+63786086 | Msa0781310:CDS |
| GTCCATACCGCGAGGACCTA+GGG | 0.509242 | 5_2:-63777991 | None:intergenic |
| GAGGCTGCTGCAAGTGCCAT+GGG | 0.510487 | 5_2:+63786087 | Msa0781310:CDS |
| GCCATGGGAGGCAGAGGTCG+CGG | 0.511189 | 5_2:+63786102 | Msa0781310:CDS |
| TGTCCATACCGCGAGGACCT+AGG | 0.512184 | 5_2:-63777992 | None:intergenic |
| CTCCTATGCAAAAGCTCTTG+AGG | 0.514576 | 5_2:+63782694 | Msa0781310:CDS |
| GCAAGTGCCATGGGAGGCAG+AGG | 0.514740 | 5_2:+63786096 | Msa0781310:CDS |
| TGGACGCTGTAATTGCAATT+GGG | 0.522784 | 5_2:+63779499 | Msa0781310:CDS |
| GTGCATGCTGCCTTAGGTAC+CGG | 0.523446 | 5_2:-63782637 | None:intergenic |
| TGCTATAAATGCTGCTACAG+AGG | 0.524498 | 5_2:+63784760 | Msa0781310:CDS |
| TGCAATCATGATTGTTAGAA+GGG | 0.525847 | 5_2:+63782465 | Msa0781310:CDS |
| ATGGTGGCTGTTTGGCCAGA+TGG | 0.526129 | 5_2:-63782279 | None:intergenic |
| TTATAGGAATGCATGCTCCT+TGG | 0.526307 | 5_2:+63779227 | Msa0781310:CDS |
| CGGCAATTATGTGACAATGC+TGG | 0.526950 | 5_2:+63783505 | Msa0781310:CDS |
| AAACATGATTGGAATAAAGA+AGG | 0.527009 | 5_2:+63779536 | Msa0781310:CDS |
| GATGTTGATATGGTATGAAA+TGG | 0.530542 | 5_2:+63786285 | Msa0781310:three_prime_UTR |
| AAGAGTTGCTGCTGCAACTG+GGG | 0.532157 | 5_2:+63782053 | Msa0781310:CDS |
| GGAGGTGGTTTCCGTGGCCG+TGG | 0.540350 | 5_2:+63786123 | Msa0781310:CDS |
| TTGATGTTGCTTACGAGTTG+TGG | 0.541866 | 5_2:-63777933 | None:intergenic |
| TGTTATTGCAGGTTATTCCC+CGG | 0.542735 | 5_2:+63783485 | Msa0781310:intron |
| AAAGAGTTGCTGCTGCAACT+GGG | 0.544621 | 5_2:+63782052 | Msa0781310:CDS |
| GTTGAAGACGGTGATGGAGG+AGG | 0.544625 | 5_2:-63777753 | None:intergenic |
| GAGCATCATCTGATCAAACT+AGG | 0.549384 | 5_2:+63786326 | Msa0781310:three_prime_UTR |
| GCATTCCTCGTCCACGGCCA+CGG | 0.551786 | 5_2:-63786134 | None:intergenic |
| AGAGCTAGCTGTTAGCATTG+AGG | 0.556400 | 5_2:+63779371 | Msa0781310:CDS |
| TGATTAGAAATGTGTTCTGA+TGG | 0.557936 | 5_2:+63786162 | Msa0781310:exon |
| AGCCTTATGTAGTAATCTAT+GGG | 0.558534 | 5_2:+63786514 | Msa0781310:three_prime_UTR |
| GATGTCGTTCGAACCACCCT+AGG | 0.565085 | 5_2:+63777975 | Msa0781310:CDS |
| TGCAGGCTCCCAGACAAAGT+TGG | 0.565410 | 5_2:-63784639 | None:intergenic |
| TGTCAATAACATTATTGATG+AGG | 0.570369 | 5_2:+63782092 | Msa0781310:CDS |
| TCAACTAAGATCTTGGCAGC+GGG | 0.578759 | 5_2:-63778095 | None:intergenic |
| GGTATGAAATGGTAATATTG+GGG | 0.582148 | 5_2:+63786296 | Msa0781310:three_prime_UTR |
| GTTGTCAGATGGAAATAAGC+CGG | 0.584185 | 5_2:+63782618 | Msa0781310:intron |
| GAAGGTACAGACACGTCTCA+AGG | 0.586298 | 5_2:+63777906 | Msa0781310:CDS |
| CAGATCATACTACTGAAAGA+AGG | 0.586463 | 5_2:+63777888 | Msa0781310:CDS |
| TCAACTGTAGTTGCTGGTGG+AGG | 0.588207 | 5_2:+63782499 | Msa0781310:CDS |
| TCTTTCAGTAGTATGATCTG+TGG | 0.588647 | 5_2:-63777885 | None:intergenic |
| ACAGCCACCATAGTTCTTCG+TGG | 0.595963 | 5_2:+63782291 | Msa0781310:CDS |
| TGAACACCATCTTCAATGAA+AGG | 0.598288 | 5_2:-63779183 | None:intergenic |
| TTTGGGGTCGACATAGCCAC+TGG | 0.598540 | 5_2:+63784596 | Msa0781310:CDS |
| GGTTCGAACGACATCGGCAA+CGG | 0.599367 | 5_2:-63777967 | None:intergenic |
| ATGGTTGAAGACGGTGATGG+AGG | 0.605889 | 5_2:-63777756 | None:intergenic |
| AGGTGAGGGTGCTCCATTTG+GGG | 0.609656 | 5_2:+63784580 | Msa0781310:intron |
| GTCCGAGAGTGCACAAGGAG+AGG | 0.612084 | 5_2:+63786068 | Msa0781310:intron |
| GGTCGCGGAGGTGGTTTCCG+TGG | 0.612096 | 5_2:+63786117 | Msa0781310:CDS |
| AATTCAACTGTAGTTGCTGG+TGG | 0.612307 | 5_2:+63782496 | Msa0781310:CDS |
| ATGTAGTCCGAGAGTGCACA+AGG | 0.618575 | 5_2:+63786063 | Msa0781310:intron |
| CTTTCTTCAAAACTTATAGG+CGG | 0.620972 | 5_2:+63779447 | Msa0781310:CDS |
| AAGGTACAGACACGTCTCAA+GGG | 0.621195 | 5_2:+63777907 | Msa0781310:CDS |
| TTTCATCCACACTTAAGACC+AGG | 0.622642 | 5_2:-63784790 | None:intergenic |
| AGCTTGCCTGGTCTTAAGTG+TGG | 0.623799 | 5_2:+63784784 | Msa0781310:CDS |
| ATTTATATAGGCGATTGAGA+AGG | 0.626592 | 5_2:+63779344 | Msa0781310:intron |
| ATCTACGCATTCCTCGTCCA+CGG | 0.629446 | 5_2:-63786140 | None:intergenic |
| ATGGGAGGCAGAGGTCGCGG+AGG | 0.629988 | 5_2:+63786105 | Msa0781310:CDS |
| GCTGCTGCAAGTGCCATGGG+AGG | 0.631802 | 5_2:+63786090 | Msa0781310:CDS |
| AGAGTTGCTGCTGCAACTGG+GGG | 0.633739 | 5_2:+63782054 | Msa0781310:CDS |
| GATTAGAAATGTGTTCTGAT+GGG | 0.635259 | 5_2:+63786163 | Msa0781310:exon |
| ATAGAAGACATGGTTGAAGA+CGG | 0.635825 | 5_2:-63777765 | None:intergenic |
| GACATGGTTGAAGACGGTGA+TGG | 0.638234 | 5_2:-63777759 | None:intergenic |
| CCACATGTAACAGACCTGAT+CGG | 0.638379 | 5_2:-63782319 | None:intergenic |
| TACCAGAAACATACATCCAG+TGG | 0.644183 | 5_2:-63786230 | None:intergenic |
| TAGGGTGGTTCGAACGACAT+CGG | 0.648371 | 5_2:-63777973 | None:intergenic |
| TTATGTAGTAATCTATGGGA+AGG | 0.650704 | 5_2:+63786518 | Msa0781310:three_prime_UTR |
| GAGTCACGCATGTTACCACC+AGG | 0.652404 | 5_2:-63781428 | None:intergenic |
| GCTTACCAGCATAGAAGACA+TGG | 0.652653 | 5_2:-63777775 | None:intergenic |
| TTTCTTCTACAGGTTCCTGG+TGG | 0.652923 | 5_2:+63781413 | Msa0781310:intron |
| TGAATCAGCAATTCCACCAG+TGG | 0.658303 | 5_2:-63784612 | None:intergenic |
| GCCACCATAGTTCTTCGTGG+TGG | 0.660027 | 5_2:+63782294 | Msa0781310:CDS |
| GGGGTCGACATAGCCACTGG+TGG | 0.660282 | 5_2:+63784599 | Msa0781310:CDS |
| TCAGTCACCATTTCTAACGA+CGG | 0.690068 | 5_2:+63778038 | Msa0781310:CDS |
| GCATTGTCACATAATTGCCG+GGG | 0.690605 | 5_2:-63783502 | None:intergenic |
| TCCACCACGAAGAACTATGG+TGG | 0.692737 | 5_2:-63782295 | None:intergenic |
| CATACCGCGAGGACCTAGGG+TGG | 0.704746 | 5_2:-63777988 | None:intergenic |
| CGAACCACCCTAGGTCCTCG+CGG | 0.746042 | 5_2:+63777984 | Msa0781310:CDS |
| TGACTGAGCCTTTATCATCG+TGG | 0.748471 | 5_2:-63778022 | None:intergenic |
| ATGAGTTTGTCCATACCGCG+AGG | 0.761718 | 5_2:-63777999 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAATTAAACATATTTAAT+AGG | + | chr5_2:63782364-63782383 | Msa0781310:intron | 10.0% |
| !!! | AAATGAAAAAAAGTATATAT+TGG | - | chr5_2:63783388-63783407 | None:intergenic | 10.0% |
| !! | TATTTAATGTACATAAAAAA+TGG | - | chr5_2:63785846-63785865 | None:intergenic | 10.0% |
| !!! | TATTTGTTAATTTTATATGT+TGG | + | chr5_2:63786386-63786405 | Msa0781310:three_prime_UTR | 10.0% |
| !! | CCTATATAAATTATTATACA+CGG | - | chr5_2:63779335-63779354 | None:intergenic | 15.0% |
| !! | TCAATAGAAAAGAAATTATT+AGG | + | chr5_2:63779638-63779657 | Msa0781310:intron | 15.0% |
| !!! | ATTACATAGAATTTTATATC+TGG | + | chr5_2:63779951-63779970 | Msa0781310:intron | 15.0% |
| !!! | ATTTTTTTTTACATATTTGC+AGG | - | chr5_2:63780594-63780613 | None:intergenic | 15.0% |
| !! | AAAATTCTTTCTTTATTCTT+AGG | - | chr5_2:63780748-63780767 | None:intergenic | 15.0% |
| !!! | ACATTAAGTAATAGTATTTT+TGG | - | chr5_2:63781533-63781552 | None:intergenic | 15.0% |
| !! | GAATATTATTTATGACAAAT+TGG | + | chr5_2:63781748-63781767 | Msa0781310:intron | 15.0% |
| !! | GACTAAAATATTAGAATATT+AGG | - | chr5_2:63782763-63782782 | None:intergenic | 15.0% |
| !! | AGTCATATATCTTTAAATTA+AGG | + | chr5_2:63782779-63782798 | Msa0781310:intron | 15.0% |
| !! | GTCATATATCTTTAAATTAA+GGG | + | chr5_2:63782780-63782799 | Msa0781310:intron | 15.0% |
| !! | GACTAAAATAATAGAATATT+AGG | - | chr5_2:63782879-63782898 | None:intergenic | 15.0% |
| !! | AGTCATATATCTTTAAATTA+AGG | + | chr5_2:63782779-63782798 | Msa0781310:intron | 15.0% |
| !! | GTCATATATCTTTAAATTAA+GGG | + | chr5_2:63782780-63782799 | Msa0781310:intron | 15.0% |
| !!! | CATTATATGCAATTAATTTT+GGG | - | chr5_2:63783288-63783307 | None:intergenic | 15.0% |
| !! | ACTTATTAAAACAAATTATG+TGG | - | chr5_2:63783870-63783889 | None:intergenic | 15.0% |
| !!! | ATAAATTTTTCTATGATGAT+GGG | - | chr5_2:63784198-63784217 | None:intergenic | 15.0% |
| !! | TACATTATTGTATAACAATA+TGG | - | chr5_2:63784312-63784331 | None:intergenic | 15.0% |
| !!! | ATCAAATACTTATTTGTTTT+GGG | + | chr5_2:63785199-63785218 | Msa0781310:intron | 15.0% |
| !!! | GAACTTTTTTATTTTATAGA+AGG | - | chr5_2:63785359-63785378 | None:intergenic | 15.0% |
| !!! | ATAATCAAATAAAGTTTTGA+TGG | - | chr5_2:63785636-63785655 | None:intergenic | 15.0% |
| !! | AAAACTATTTACATTTATGT+GGG | - | chr5_2:63785937-63785956 | None:intergenic | 15.0% |
| !! | AAAAACTATTTACATTTATG+TGG | - | chr5_2:63785938-63785957 | None:intergenic | 15.0% |
| !! | CAACTTAAATAAGAACTTAT+AGG | + | chr5_2:63778355-63778374 | Msa0781310:intron | 20.0% |
| !! | TACATAAACACTAATATGAT+AGG | - | chr5_2:63778388-63778407 | None:intergenic | 20.0% |
| !! | TTATTTCCATAAGTTATCTA+GGG | - | chr5_2:63778487-63778506 | None:intergenic | 20.0% |
| !! | TTCACTCTCAAAATTTAATA+CGG | + | chr5_2:63779202-63779221 | Msa0781310:CDS | 20.0% |
| !! | AAAATTTAATACGGAGTTAT+AGG | + | chr5_2:63779211-63779230 | Msa0781310:CDS | 20.0% |
| !! | CCGTGTATAATAATTTATAT+AGG | + | chr5_2:63779332-63779351 | Msa0781310:intron | 20.0% |
| !! | TTGTGAAAAAAAACATTTGA+TGG | + | chr5_2:63780017-63780036 | Msa0781310:intron | 20.0% |
| !! | GATTGTTCATAAAATGTAAT+AGG | + | chr5_2:63780618-63780637 | Msa0781310:intron | 20.0% |
| !!! | TCGTATATGTTTTTGTTTTA+TGG | + | chr5_2:63781311-63781330 | Msa0781310:intron | 20.0% |
| !!! | AACAAACGAATTTGAAATAT+TGG | - | chr5_2:63781601-63781620 | None:intergenic | 20.0% |
| !! | AAACTACTTATTAATATACG+TGG | - | chr5_2:63781952-63781971 | None:intergenic | 20.0% |
| !! | GACTGTTAAATATTAAAATG+TGG | + | chr5_2:63782582-63782601 | Msa0781310:intron | 20.0% |
| !! | AATATTAAAATGTGGTTATG+TGG | + | chr5_2:63782590-63782609 | Msa0781310:intron | 20.0% |
| !!! | AAGTTTTTGTAAACTAGATA+TGG | + | chr5_2:63782718-63782737 | Msa0781310:intron | 20.0% |
| !!! | AAGTTTTTGTAAACTAGATA+TGG | + | chr5_2:63782718-63782737 | Msa0781310:intron | 20.0% |
| !!! | AATCATTCTAGAAAATTTTC+AGG | + | chr5_2:63783017-63783036 | Msa0781310:intron | 20.0% |
| !! | GAAAATTTCATACACAAAAA+GGG | - | chr5_2:63783251-63783270 | None:intergenic | 20.0% |
| !! | AGAAAATTTCATACACAAAA+AGG | - | chr5_2:63783252-63783271 | None:intergenic | 20.0% |
| !!! | GCATTATATGCAATTAATTT+TGG | - | chr5_2:63783289-63783308 | None:intergenic | 20.0% |
| !!! | ATTTTTGAAATCACTATTTC+AGG | + | chr5_2:63783404-63783423 | Msa0781310:intron | 20.0% |
| !!! | TAAATTTTTCTATGATGATG+GGG | - | chr5_2:63784197-63784216 | None:intergenic | 20.0% |
| !!! | GATAAATTTTTCTATGATGA+TGG | - | chr5_2:63784199-63784218 | None:intergenic | 20.0% |
| !! | ATCATAGAAAAATTTATCGA+AGG | + | chr5_2:63784201-63784220 | Msa0781310:intron | 20.0% |
| !! | TCATAGAAAAATTTATCGAA+GGG | + | chr5_2:63784202-63784221 | Msa0781310:intron | 20.0% |
| !! | TGTTATACAATAATGTATTC+AGG | + | chr5_2:63784315-63784334 | Msa0781310:intron | 20.0% |
| !! | TAAATATAAACTGATAGAGA+TGG | - | chr5_2:63784845-63784864 | None:intergenic | 20.0% |
| !!! | AAAGGATTTTTTCTACTTTA+AGG | + | chr5_2:63784958-63784977 | Msa0781310:intron | 20.0% |
| !!! | AAGGATTTTTTCTACTTTAA+GGG | + | chr5_2:63784959-63784978 | Msa0781310:intron | 20.0% |
| !!! | TAGTATATAACTTTTACCTT+TGG | + | chr5_2:63784987-63785006 | Msa0781310:intron | 20.0% |
| !! | CAAAACAAATAAGTATTTGA+TGG | - | chr5_2:63785200-63785219 | None:intergenic | 20.0% |
| !!! | CATCAAATACTTATTTGTTT+TGG | + | chr5_2:63785198-63785217 | Msa0781310:intron | 20.0% |
| !!! | TCAAATACTTATTTGTTTTG+GGG | + | chr5_2:63785200-63785219 | Msa0781310:intron | 20.0% |
| !! | TTTCTCATTAAAATCATTGA+AGG | - | chr5_2:63785602-63785621 | None:intergenic | 20.0% |
| !! | ATTAATTGTTGCATAATCAT+GGG | + | chr5_2:63785701-63785720 | Msa0781310:intron | 20.0% |
| !! | AAATAACATAATCGTAGAAT+AGG | - | chr5_2:63785974-63785993 | None:intergenic | 20.0% |
| !!! | TTGTTAATTTTATATGTTGG+AGG | + | chr5_2:63786389-63786408 | Msa0781310:three_prime_UTR | 20.0% |
| !!! | TGTTAATTTTATATGTTGGA+GGG | + | chr5_2:63786390-63786409 | Msa0781310:three_prime_UTR | 20.0% |
| !! | TATCTAAATACTTAGTGTTA+AGG | - | chr5_2:63786475-63786494 | None:intergenic | 20.0% |
| !! | CTAATTCATTTCTGAAAATG+CGG | + | chr5_2:63777846-63777865 | Msa0781310:intron | 25.0% |
| ! | TTGTATTTGTTTCATTCAGA+TGG | + | chr5_2:63778294-63778313 | Msa0781310:intron | 25.0% |
| !! | ATTCAGATGGTTAAGATTTT+TGG | + | chr5_2:63778307-63778326 | Msa0781310:intron | 25.0% |
| !!! | GGTTAAGATTTTTGGAATTA+AGG | + | chr5_2:63778315-63778334 | Msa0781310:intron | 25.0% |
| !!! | AACACAAACTTTTTTGTGTA+AGG | + | chr5_2:63778439-63778458 | Msa0781310:intron | 25.0% |
| ! | CTTATTTCCATAAGTTATCT+AGG | - | chr5_2:63778488-63778507 | None:intergenic | 25.0% |
| ! | CATTCTATAGCAAAAGATTA+AGG | + | chr5_2:63778593-63778612 | Msa0781310:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr5_2:63778619-63778638 | None:intergenic | 25.0% |
| ! | TTATTTGCATAAGTTCTCTA+GGG | - | chr5_2:63778934-63778953 | None:intergenic | 25.0% |
| ! | ACACTTTCTTCAAAACTTAT+AGG | + | chr5_2:63779444-63779463 | Msa0781310:CDS | 25.0% |
| ! | AAACATGATTGGAATAAAGA+AGG | + | chr5_2:63779536-63779555 | Msa0781310:CDS | 25.0% |
| ! | AAAAGAGATAATGTACCAAA+TGG | - | chr5_2:63779594-63779613 | None:intergenic | 25.0% |
| !! | TTGGTACATTATCTCTTTTA+TGG | + | chr5_2:63779595-63779614 | Msa0781310:intron | 25.0% |
| !! | GAACTAATGTGTTTTATGAT+TGG | + | chr5_2:63779860-63779879 | Msa0781310:intron | 25.0% |
| !!! | ATAGAATTTTGAGTGTACTT+TGG | + | chr5_2:63779889-63779908 | Msa0781310:intron | 25.0% |
| !!! | CATTTGAAGATTTTTAAAGC+CGG | + | chr5_2:63780132-63780151 | Msa0781310:intron | 25.0% |
| ! | TTATTAGAATGGTGGTTATA+TGG | - | chr5_2:63780175-63780194 | None:intergenic | 25.0% |
| ! | AATTGATGTTTCATAGTTCT+CGG | - | chr5_2:63780262-63780281 | None:intergenic | 25.0% |
| ! | TGCAAAAATAGTAACTGTTT+GGG | - | chr5_2:63780290-63780309 | None:intergenic | 25.0% |
| ! | TGATTACAATGTTAGGAAAT+GGG | - | chr5_2:63780348-63780367 | None:intergenic | 25.0% |
| ! | TTGATTACAATGTTAGGAAA+TGG | - | chr5_2:63780349-63780368 | None:intergenic | 25.0% |
| ! | TGAAACTTGATTACAATGTT+AGG | - | chr5_2:63780355-63780374 | None:intergenic | 25.0% |
| !! | GATACATTTCAATTGATAGT+AGG | + | chr5_2:63780538-63780557 | Msa0781310:intron | 25.0% |
| ! | CATAAAATGTAATAGGAAGT+TGG | + | chr5_2:63780625-63780644 | Msa0781310:intron | 25.0% |
| ! | AATTAGATAACTGTAAGCTA+CGG | + | chr5_2:63780854-63780873 | Msa0781310:intron | 25.0% |
| ! | AATTAACAAGTAAAATGGCA+AGG | - | chr5_2:63780993-63781012 | None:intergenic | 25.0% |
| ! | AGTGGAATTAACAAGTAAAA+TGG | - | chr5_2:63780998-63781017 | None:intergenic | 25.0% |
| ! | ACATAATTCAGTGTAATCAT+AGG | + | chr5_2:63781167-63781186 | Msa0781310:intron | 25.0% |
| !!! | TTTAGGTACTTTTTTTTGTG+TGG | + | chr5_2:63781366-63781385 | Msa0781310:intron | 25.0% |
| ! | ATATGAAAATGTCTTCTTGA+AGG | - | chr5_2:63781474-63781493 | None:intergenic | 25.0% |
| ! | ACTATTACTTAATGTTGAGT+TGG | + | chr5_2:63781538-63781557 | Msa0781310:CDS | 25.0% |
| !! | TATTTTTCCTCATTAGATCA+AGG | + | chr5_2:63781860-63781879 | Msa0781310:intron | 25.0% |
| ! | TGTCAATAACATTATTGATG+AGG | + | chr5_2:63782092-63782111 | Msa0781310:CDS | 25.0% |
| !!! | TTTTTACCTTATTTGCTTGA+AGG | + | chr5_2:63782185-63782204 | Msa0781310:intron | 25.0% |
| !!! | TATTTTTTCACAGTTCATAG+AGG | + | chr5_2:63782420-63782439 | Msa0781310:intron | 25.0% |
| !!! | AATTTTGTTGTGCATTTCAT+TGG | + | chr5_2:63782548-63782567 | Msa0781310:intron | 25.0% |
| ! | CATTTCATTGGATTATGATA+GGG | + | chr5_2:63782560-63782579 | Msa0781310:intron | 25.0% |
| !!! | AAAATTTTCAGGTTTCCAAT+AGG | + | chr5_2:63783028-63783047 | Msa0781310:intron | 25.0% |
| !!! | TCCAATAGGTTTTTTAATCT+TGG | + | chr5_2:63783042-63783061 | Msa0781310:intron | 25.0% |
| ! | ACCAAGATTAAAAAACCTAT+TGG | - | chr5_2:63783046-63783065 | None:intergenic | 25.0% |
| !! | CAAATTTAATGTGTTATTGC+AGG | + | chr5_2:63783474-63783493 | Msa0781310:intron | 25.0% |
| ! | CAATGATCTTATATTGAACT+AGG | - | chr5_2:63783681-63783700 | None:intergenic | 25.0% |
| ! | TGGAGGTTATAATATGTTAA+AGG | + | chr5_2:63783730-63783749 | Msa0781310:intron | 25.0% |
| ! | TTAAAACAATTTGCATGAAC+AGG | + | chr5_2:63784064-63784083 | Msa0781310:intron | 25.0% |
| !! | AGTTAATACATTCTGAAAGT+GGG | - | chr5_2:63784100-63784119 | None:intergenic | 25.0% |
| !! | TAGTTAATACATTCTGAAAG+TGG | - | chr5_2:63784101-63784120 | None:intergenic | 25.0% |
| ! | TCAAGAGGAAATAAATAAAG+TGG | - | chr5_2:63784163-63784182 | None:intergenic | 25.0% |
| ! | TCCAATTCTAATGTTCTATA+TGG | + | chr5_2:63784701-63784720 | Msa0781310:intron | 25.0% |
| ! | TCCATATAGAACATTAGAAT+TGG | - | chr5_2:63784705-63784724 | None:intergenic | 25.0% |
| ! | ATTCTAATGTTCTATATGGA+TGG | + | chr5_2:63784705-63784724 | Msa0781310:intron | 25.0% |
| ! | TGAAACAGTTAAAAATCCTA+AGG | + | chr5_2:63784808-63784827 | Msa0781310:CDS | 25.0% |
| !!! | TGTTTTGGTTAATATTTCCT+AGG | + | chr5_2:63784881-63784900 | Msa0781310:intron | 25.0% |
| !!! | GTTTTGGTTAATATTTCCTA+GGG | + | chr5_2:63784882-63784901 | Msa0781310:intron | 25.0% |
| !! | TGACACATTTCTTTTTGTAA+AGG | + | chr5_2:63784940-63784959 | Msa0781310:intron | 25.0% |
| !!! | AGGATTTTTTCTACTTTAAG+GGG | + | chr5_2:63784960-63784979 | Msa0781310:intron | 25.0% |
| ! | CGAGTAAAAGAAATTTGTAT+GGG | - | chr5_2:63785153-63785172 | None:intergenic | 25.0% |
| !! | CCATACAAATTTCTTTTACT+CGG | + | chr5_2:63785151-63785170 | Msa0781310:intron | 25.0% |
| !! | GAAAAATATCATTCTGGAAA+TGG | - | chr5_2:63785314-63785333 | None:intergenic | 25.0% |
| ! | AGAAGGAATAAGATCAAATT+GGG | - | chr5_2:63785342-63785361 | None:intergenic | 25.0% |
| ! | TAGAAGGAATAAGATCAAAT+TGG | - | chr5_2:63785343-63785362 | None:intergenic | 25.0% |
| ! | AATTCACTTATCTTGACTAA+GGG | - | chr5_2:63785381-63785400 | None:intergenic | 25.0% |
| ! | TAATTCACTTATCTTGACTA+AGG | - | chr5_2:63785382-63785401 | None:intergenic | 25.0% |
| ! | TGCTAATATCAAAGCAAATT+GGG | - | chr5_2:63785519-63785538 | None:intergenic | 25.0% |
| ! | TTGAATACATAATATGAGTG+AGG | - | chr5_2:63785574-63785593 | None:intergenic | 25.0% |
| ! | TGATTATGCAACAATTAATC+AGG | - | chr5_2:63785700-63785719 | None:intergenic | 25.0% |
| ! | GATTAATTGTTGCATAATCA+TGG | + | chr5_2:63785700-63785719 | Msa0781310:intron | 25.0% |
| !!! | TACATTGATTTACAGAATTG+TGG | + | chr5_2:63785797-63785816 | Msa0781310:intron | 25.0% |
| ! | TTTATCTACAGATGTTGATA+TGG | + | chr5_2:63786275-63786294 | Msa0781310:three_prime_UTR | 25.0% |
| ! | ATGGTATGAAATGGTAATAT+TGG | + | chr5_2:63786294-63786313 | Msa0781310:three_prime_UTR | 25.0% |
| ! | TGGTATGAAATGGTAATATT+GGG | + | chr5_2:63786295-63786314 | Msa0781310:three_prime_UTR | 25.0% |
| !! | GTTAATTTTATATGTTGGAG+GGG | + | chr5_2:63786391-63786410 | Msa0781310:three_prime_UTR | 25.0% |
| ! | CGCATTTTCAGAAATGAATT+AGG | - | chr5_2:63777848-63777867 | None:intergenic | 30.0% |
| AGCAATATCAACTAAGATCT+TGG | - | chr5_2:63778105-63778124 | None:intergenic | 30.0% | |
| TTTCTGCAAAATGATGAGAT+CGG | - | chr5_2:63778177-63778196 | None:intergenic | 30.0% | |
| ATATTACTCTCTGCTTAGAT+CGG | + | chr5_2:63778239-63778258 | Msa0781310:intron | 30.0% | |
| AAACTACCCTAGATAACTTA+TGG | + | chr5_2:63778478-63778497 | Msa0781310:intron | 30.0% | |
| GATAACTTATGGAAATAAGC+TGG | + | chr5_2:63778489-63778508 | Msa0781310:intron | 30.0% | |
| TTATTTGTAGCTTATAGCAC+AGG | + | chr5_2:63778634-63778653 | Msa0781310:intron | 30.0% | |
| ! | TACGTTTTGTGACATTGTTT+TGG | - | chr5_2:63778823-63778842 | None:intergenic | 30.0% |
| AAAACAATGTCACAAAACGT+AGG | + | chr5_2:63778822-63778841 | Msa0781310:intron | 30.0% | |
| CTTATTTGCATAAGTTCTCT+AGG | - | chr5_2:63778935-63778954 | None:intergenic | 30.0% | |
| GCTAAAATGAGCTTATCTAT+TGG | - | chr5_2:63779028-63779047 | None:intergenic | 30.0% | |
| CACTTAGAGCTTAATTGAAT+TGG | - | chr5_2:63779050-63779069 | None:intergenic | 30.0% | |
| TGAGATATAAGTATGTACCA+AGG | - | chr5_2:63779247-63779266 | None:intergenic | 30.0% | |
| ATTTATATAGGCGATTGAGA+AGG | + | chr5_2:63779344-63779363 | Msa0781310:intron | 30.0% | |
| CTTTCTTCAAAACTTATAGG+CGG | + | chr5_2:63779447-63779466 | Msa0781310:CDS | 30.0% | |
| AAAGGAATTCTTTGCATCTA+TGG | + | chr5_2:63779473-63779492 | Msa0781310:CDS | 30.0% | |
| GATGATAGGTTAAACATGAT+TGG | + | chr5_2:63779525-63779544 | Msa0781310:CDS | 30.0% | |
| ! | TTTACAACCTTTTCTCCATT+TGG | + | chr5_2:63779576-63779595 | Msa0781310:intron | 30.0% |
| TAATGTACCAAATGGAGAAA+AGG | - | chr5_2:63779586-63779605 | None:intergenic | 30.0% | |
| ! | GTACATTATCTCTTTTATGG+TGG | + | chr5_2:63779598-63779617 | Msa0781310:intron | 30.0% |
| ACACATTTATGCAAAGTGAT+TGG | - | chr5_2:63779747-63779766 | None:intergenic | 30.0% | |
| TTCGTTAAAATGATATCCAC+TGG | - | chr5_2:63780103-63780122 | None:intergenic | 30.0% | |
| CTGCAAAAATAGTAACTGTT+TGG | - | chr5_2:63780291-63780310 | None:intergenic | 30.0% | |
| AAACTAGGTAACCTTTATTG+AGG | - | chr5_2:63780459-63780478 | None:intergenic | 30.0% | |
| TCTCAAATTATTATCCGTGT+CGG | - | chr5_2:63781142-63781161 | None:intergenic | 30.0% | |
| TTTGAACTGTATCACTAACT+AGG | + | chr5_2:63781267-63781286 | Msa0781310:intron | 30.0% | |
| !! | TAAGCCATTTAGTTCTCTTT+AGG | + | chr5_2:63781349-63781368 | Msa0781310:intron | 30.0% |
| AGTACCTAAAGAGAACTAAA+TGG | - | chr5_2:63781356-63781375 | None:intergenic | 30.0% | |
| ! | TAGTGCTGTTATAATGATTC+AGG | + | chr5_2:63781389-63781408 | Msa0781310:intron | 30.0% |
| ! | AAGAAGACATTTTCATATGC+TGG | + | chr5_2:63781476-63781495 | Msa0781310:CDS | 30.0% |
| AGAAAGAAAATGCCGAAATA+AGG | + | chr5_2:63781573-63781592 | Msa0781310:CDS | 30.0% | |
| ! | GAAATATTGGCACCTTATTT+CGG | - | chr5_2:63781588-63781607 | None:intergenic | 30.0% |
| !!! | TTTTGTGTTCGTTGATTTTG+AGG | + | chr5_2:63781619-63781638 | Msa0781310:intron | 30.0% |
| AATCAATTGTTGATGCAGAA+TGG | + | chr5_2:63781726-63781745 | Msa0781310:intron | 30.0% | |
| AACTAAACCTTGATCTAATG+AGG | - | chr5_2:63781870-63781889 | None:intergenic | 30.0% | |
| ATGAGGTTGTGTATTATTAG+TGG | + | chr5_2:63782109-63782128 | Msa0781310:intron | 30.0% | |
| TGAGGTTGTGTATTATTAGT+GGG | + | chr5_2:63782110-63782129 | Msa0781310:intron | 30.0% | |
| !! | ATTTTTGAGGAAAAGCAAGT+AGG | + | chr5_2:63782225-63782244 | Msa0781310:CDS | 30.0% |
| TTTAATAGGATCTGCCATTA+TGG | + | chr5_2:63782378-63782397 | Msa0781310:intron | 30.0% | |
| TTAATAGGATCTGCCATTAT+GGG | + | chr5_2:63782379-63782398 | Msa0781310:intron | 30.0% | |
| ACTTAAATATGTGCCCATAA+TGG | - | chr5_2:63782395-63782414 | None:intergenic | 30.0% | |
| ATGCAATCATGATTGTTAGA+AGG | + | chr5_2:63782464-63782483 | Msa0781310:CDS | 30.0% | |
| TGCAATCATGATTGTTAGAA+GGG | + | chr5_2:63782465-63782484 | Msa0781310:CDS | 30.0% | |
| GCATTTCATTGGATTATGAT+AGG | + | chr5_2:63782559-63782578 | Msa0781310:intron | 30.0% | |
| AAACTAGATATGGTCTATAG+TGG | + | chr5_2:63782728-63782747 | Msa0781310:intron | 30.0% | |
| AAACTAGATATGGTCTATAG+TGG | + | chr5_2:63782728-63782747 | Msa0781310:intron | 30.0% | |
| !! | ATATTTTGGATAGCAGACAA+CGG | - | chr5_2:63783126-63783145 | None:intergenic | 30.0% |
| TCTTGTCAAATAGTGACTAT+AGG | + | chr5_2:63783155-63783174 | Msa0781310:intron | 30.0% | |
| CTTGTCAAATAGTGACTATA+GGG | + | chr5_2:63783156-63783175 | Msa0781310:intron | 30.0% | |
| AGAGAATGTTCAAAATCACA+AGG | - | chr5_2:63783311-63783330 | None:intergenic | 30.0% | |
| TTACTACATATACCTGCATT+TGG | + | chr5_2:63783621-63783640 | Msa0781310:intron | 30.0% | |
| ATCTTATATTGAACTAGGCT+TGG | - | chr5_2:63783676-63783695 | None:intergenic | 30.0% | |
| AATTGAATACAAGTTCAAGC+TGG | + | chr5_2:63783710-63783729 | Msa0781310:intron | 30.0% | |
| GTTATAATATGTTAAAGGCC+TGG | + | chr5_2:63783735-63783754 | Msa0781310:intron | 30.0% | |
| ATGCTTAGAAATTAGATTCG+TGG | + | chr5_2:63783995-63784014 | Msa0781310:intron | 30.0% | |
| AGAAATTAGATTCGTGGATT+TGG | + | chr5_2:63784001-63784020 | Msa0781310:intron | 30.0% | |
| TCCAATCAACATATACTTGA+TGG | - | chr5_2:63784136-63784155 | None:intergenic | 30.0% | |
| AAGGGTTTGAATGAACTAAA+TGG | - | chr5_2:63784276-63784295 | None:intergenic | 30.0% | |
| AATGCATTTACAGATATGTC+AGG | - | chr5_2:63784483-63784502 | None:intergenic | 30.0% | |
| ! | CAAAACAAAAGTGCAATCAT+CGG | - | chr5_2:63784868-63784887 | None:intergenic | 30.0% |
| ATGAAATTTCAACATACCCT+AGG | - | chr5_2:63784901-63784920 | None:intergenic | 30.0% | |
| CAAAAAGAAATGTGTCAAAC+AGG | - | chr5_2:63784937-63784956 | None:intergenic | 30.0% | |
| !!! | GGATTTTTTCTACTTTAAGG+GGG | + | chr5_2:63784961-63784980 | Msa0781310:intron | 30.0% |
| CAAGGAAAGTTAAGAACAAT+TGG | - | chr5_2:63785063-63785082 | None:intergenic | 30.0% | |
| ACAATGCTTAAAAGACAACA+AGG | - | chr5_2:63785081-63785100 | None:intergenic | 30.0% | |
| CCGAGTAAAAGAAATTTGTA+TGG | - | chr5_2:63785154-63785173 | None:intergenic | 30.0% | |
| !!! | ACTTATTTGTTTTGGGGTAA+TGG | + | chr5_2:63785206-63785225 | Msa0781310:intron | 30.0% |
| AATGATTAAGCGAGGAAAAA+GGG | - | chr5_2:63785432-63785451 | None:intergenic | 30.0% | |
| AGTATCAGATACACAATTCT+TGG | - | chr5_2:63785495-63785514 | None:intergenic | 30.0% | |
| GTGCTAATATCAAAGCAAAT+TGG | - | chr5_2:63785520-63785539 | None:intergenic | 30.0% | |
| CATCATTTGTACAATGTACA+TGG | - | chr5_2:63785662-63785681 | None:intergenic | 30.0% | |
| ATTCTTGCGATGATTTAAGT+TGG | + | chr5_2:63785749-63785768 | Msa0781310:intron | 30.0% | |
| ! | TTCTTGCGATGATTTAAGTT+GGG | + | chr5_2:63785750-63785769 | Msa0781310:intron | 30.0% |
| AAGTTCAAAAGTCACATTGA+GGG | - | chr5_2:63785777-63785796 | None:intergenic | 30.0% | |
| AAAGTTCAAAAGTCACATTG+AGG | - | chr5_2:63785778-63785797 | None:intergenic | 30.0% | |
| !! | TTCTCTAAGCTTGTTAGTTA+TGG | + | chr5_2:63785882-63785901 | Msa0781310:intron | 30.0% |
| TTTCACTAATACGAAGAAGT+AGG | + | chr5_2:63785992-63786011 | Msa0781310:intron | 30.0% | |
| GAAGTAGGAAACAACATTTA+TGG | + | chr5_2:63786007-63786026 | Msa0781310:intron | 30.0% | |
| TGATTAGAAATGTGTTCTGA+TGG | + | chr5_2:63786162-63786181 | Msa0781310:exon | 30.0% | |
| GATTAGAAATGTGTTCTGAT+GGG | + | chr5_2:63786163-63786182 | Msa0781310:exon | 30.0% | |
| GATGTTGATATGGTATGAAA+TGG | + | chr5_2:63786285-63786304 | Msa0781310:three_prime_UTR | 30.0% | |
| GGTATGAAATGGTAATATTG+GGG | + | chr5_2:63786296-63786315 | Msa0781310:three_prime_UTR | 30.0% | |
| ATTTATTAGATGGCTGTTGT+TGG | + | chr5_2:63786418-63786437 | Msa0781310:three_prime_UTR | 30.0% | |
| TTTATTAGATGGCTGTTGTT+GGG | + | chr5_2:63786419-63786438 | Msa0781310:three_prime_UTR | 30.0% | |
| !! | TAGCCTTATGTAGTAATCTA+TGG | + | chr5_2:63786513-63786532 | Msa0781310:three_prime_UTR | 30.0% |
| ! | AGCCTTATGTAGTAATCTAT+GGG | + | chr5_2:63786514-63786533 | Msa0781310:three_prime_UTR | 30.0% |
| TTCCCATAGATTACTACATA+AGG | - | chr5_2:63786519-63786538 | None:intergenic | 30.0% | |
| TTATGTAGTAATCTATGGGA+AGG | + | chr5_2:63786518-63786537 | Msa0781310:three_prime_UTR | 30.0% | |
| TTCTCACACTGCAAAAAAGA+AGG | + | chr5_2:63777669-63777688 | Msa0781310:five_prime_UTR | 35.0% | |
| !!! | TTTTTTCGAGTACCAGTTTC+TGG | - | chr5_2:63777697-63777716 | None:intergenic | 35.0% |
| AGGAAGAGAGAGAGTTATTA+GGG | - | chr5_2:63777736-63777755 | None:intergenic | 35.0% | |
| ATAGAAGACATGGTTGAAGA+CGG | - | chr5_2:63777768-63777787 | None:intergenic | 35.0% | |
| TCTTTCAGTAGTATGATCTG+TGG | - | chr5_2:63777888-63777907 | None:intergenic | 35.0% | |
| CAGATCATACTACTGAAAGA+AGG | + | chr5_2:63777888-63777907 | Msa0781310:CDS | 35.0% | |
| AAACTCATCCACGATGATAA+AGG | + | chr5_2:63778014-63778033 | Msa0781310:CDS | 35.0% | |
| ! | TGGAATTAAGGACGTGTTTT+TGG | + | chr5_2:63778327-63778346 | Msa0781310:intron | 35.0% |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr5_2:63778858-63778877 | Msa0781310:intron | 35.0% | |
| ! | CGTAGAAGTTCAAGTTTACT+TGG | - | chr5_2:63778885-63778904 | None:intergenic | 35.0% |
| TGAACACCATCTTCAATGAA+AGG | - | chr5_2:63779186-63779205 | None:intergenic | 35.0% | |
| ! | TAGCATTGAGGGAAAAAGTT+TGG | + | chr5_2:63779383-63779402 | Msa0781310:CDS | 35.0% |
| ! | GAAGAGAAGAAAAGTTTGCT+TGG | + | chr5_2:63779405-63779424 | Msa0781310:CDS | 35.0% |
| AAAACTTATAGGCGGAGAAA+AGG | + | chr5_2:63779455-63779474 | Msa0781310:CDS | 35.0% | |
| ATTCTTTGCATCTATGGTTG+TGG | + | chr5_2:63779479-63779498 | Msa0781310:CDS | 35.0% | |
| TAGGAAAATGAGTGCAAAAG+AGG | + | chr5_2:63779657-63779676 | Msa0781310:intron | 35.0% | |
| AAAATGAGTGCAAAAGAGGA+AGG | + | chr5_2:63779661-63779680 | Msa0781310:intron | 35.0% | |
| ! | CTTTCTGATTTCTTTTCCTG+CGG | + | chr5_2:63780071-63780090 | Msa0781310:intron | 35.0% |
| GTGGCAATTTATTAGAATGG+TGG | - | chr5_2:63780183-63780202 | None:intergenic | 35.0% | |
| CGAGTGGCAATTTATTAGAA+TGG | - | chr5_2:63780186-63780205 | None:intergenic | 35.0% | |
| TGTTGTCAACATCGAGAAAT+GGG | - | chr5_2:63780234-63780253 | None:intergenic | 35.0% | |
| ATGTTGTCAACATCGAGAAA+TGG | - | chr5_2:63780235-63780254 | None:intergenic | 35.0% | |
| TTTGCAGTTCTCCAAATATG+TGG | + | chr5_2:63780304-63780323 | Msa0781310:intron | 35.0% | |
| AGTAACAGCAACCACATATT+TGG | - | chr5_2:63780318-63780337 | None:intergenic | 35.0% | |
| TAGGTAACCTTTATTGAGGA+GGG | - | chr5_2:63780455-63780474 | None:intergenic | 35.0% | |
| TGCAATGCAACATGAAAACT+AGG | - | chr5_2:63780474-63780493 | None:intergenic | 35.0% | |
| TTTACCCACAGATTCTTAAG+TGG | + | chr5_2:63780516-63780535 | Msa0781310:intron | 35.0% | |
| GTATCCACTTAAGAATCTGT+GGG | - | chr5_2:63780523-63780542 | None:intergenic | 35.0% | |
| TGTATCCACTTAAGAATCTG+TGG | - | chr5_2:63780524-63780543 | None:intergenic | 35.0% | |
| TGATGCACAAGATATTGTAC+AGG | + | chr5_2:63780668-63780687 | Msa0781310:intron | 35.0% | |
| GATGCACAAGATATTGTACA+GGG | + | chr5_2:63780669-63780688 | Msa0781310:intron | 35.0% | |
| TCACTACCCATGAATAAGTA+GGG | + | chr5_2:63780801-63780820 | Msa0781310:intron | 35.0% | |
| GCTTCATAGGTTCAAACAAA+CGG | - | chr5_2:63781106-63781125 | None:intergenic | 35.0% | |
| TTGTTTGAACCTATGAAGCA+CGG | + | chr5_2:63781107-63781126 | Msa0781310:intron | 35.0% | |
| ACAGTTCAAAGTATGAAGCA+CGG | - | chr5_2:63781257-63781276 | None:intergenic | 35.0% | |
| AACTGTATCACTAACTAGGT+TGG | + | chr5_2:63781271-63781290 | Msa0781310:intron | 35.0% | |
| ! | ATCACTAACTAGGTTGGAAT+TGG | + | chr5_2:63781277-63781296 | Msa0781310:intron | 35.0% |
| ! | TCACTAACTAGGTTGGAATT+GGG | + | chr5_2:63781278-63781297 | Msa0781310:intron | 35.0% |
| !! | TGATTCAGGTTTTCTTCTAC+AGG | + | chr5_2:63781403-63781422 | Msa0781310:intron | 35.0% |
| TTTGGATCGAGAAACTTCTT+GGG | - | chr5_2:63781515-63781534 | None:intergenic | 35.0% | |
| ! | TTTTGGATCGAGAAACTTCT+TGG | - | chr5_2:63781516-63781535 | None:intergenic | 35.0% |
| TGAAGAGTTGCTTAGTTATG+TGG | + | chr5_2:63781648-63781667 | Msa0781310:intron | 35.0% | |
| AAGGATCTGATAATCTGTAG+AGG | - | chr5_2:63781697-63781716 | None:intergenic | 35.0% | |
| ACAATTGATTGATACTGCGA+AGG | - | chr5_2:63781716-63781735 | None:intergenic | 35.0% | |
| TTGGATAAATGTGTCCAAAG+TGG | + | chr5_2:63781767-63781786 | Msa0781310:intron | 35.0% | |
| TCGGCAAAATACTGTTTCAA+AGG | - | chr5_2:63781988-63782007 | None:intergenic | 35.0% | |
| AGCACAGAAAATGTCTCTAT+CGG | - | chr5_2:63782007-63782026 | None:intergenic | 35.0% | |
| CAAGAACCTTCAAGCAAATA+AGG | - | chr5_2:63782194-63782213 | None:intergenic | 35.0% | |
| CTTATTTGCTTGAAGGTTCT+TGG | + | chr5_2:63782192-63782211 | Msa0781310:intron | 35.0% | |
| ! | TGGAACTTGTGAGATTTTTG+AGG | + | chr5_2:63782212-63782231 | Msa0781310:CDS | 35.0% |
| GAGAGATTCAACATCTTCAA+TGG | + | chr5_2:63782252-63782271 | Msa0781310:CDS | 35.0% | |
| AAGAATTCAACTGTAGTTGC+TGG | + | chr5_2:63782493-63782512 | Msa0781310:CDS | 35.0% | |
| ATGCACAACAAAATTCTGAG+TGG | - | chr5_2:63782543-63782562 | None:intergenic | 35.0% | |
| ATGTGGTTATTGTTGTCAGA+TGG | + | chr5_2:63782607-63782626 | Msa0781310:intron | 35.0% | |
| TTTAAATTAAGGGACTGCAG+TGG | + | chr5_2:63782790-63782809 | Msa0781310:intron | 35.0% | |
| TTTAAATTAAGGGACTGCAG+TGG | + | chr5_2:63782790-63782809 | Msa0781310:intron | 35.0% | |
| ! | GGTCTAAAGTTCAAACTAAC+AGG | + | chr5_2:63782944-63782963 | Msa0781310:intron | 35.0% |
| TTGCAGATCTGGGAAAATAT+TGG | - | chr5_2:63783213-63783232 | None:intergenic | 35.0% | |
| TTTCTCTCAATTGCAGATCT+GGG | - | chr5_2:63783223-63783242 | None:intergenic | 35.0% | |
| ! | TTTTCTCTCAATTGCAGATC+TGG | - | chr5_2:63783224-63783243 | None:intergenic | 35.0% |
| AAATCACTATTTCAGGCATC+TGG | + | chr5_2:63783411-63783430 | Msa0781310:intron | 35.0% | |
| CAATCGTGCAAATAAAACGA+AGG | - | chr5_2:63783596-63783615 | None:intergenic | 35.0% | |
| TGAAGTAACTCACGAATATG+TGG | + | chr5_2:63783901-63783920 | Msa0781310:intron | 35.0% | |
| GCAGCTTAACTCAAGTAAAA+TGG | - | chr5_2:63783962-63783981 | None:intergenic | 35.0% | |
| GCCATCAAGTATATGTTGAT+TGG | + | chr5_2:63784132-63784151 | Msa0781310:intron | 35.0% | |
| !! | TTAGTTTGTGCTGTCATACT+TGG | + | chr5_2:63784340-63784359 | Msa0781310:intron | 35.0% |
| AAACTTCTGAGTTCTTCTGA+TGG | + | chr5_2:63784519-63784538 | Msa0781310:intron | 35.0% | |
| AACTTCTGAGTTCTTCTGAT+GGG | + | chr5_2:63784520-63784539 | Msa0781310:intron | 35.0% | |
| !! | TGCTTTTACATGCTTGTTGA+AGG | + | chr5_2:63784560-63784579 | Msa0781310:intron | 35.0% |
| ATTCATTTGCCAACTTTGTC+TGG | + | chr5_2:63784630-63784649 | Msa0781310:CDS | 35.0% | |
| TTCATTTGCCAACTTTGTCT+GGG | + | chr5_2:63784631-63784650 | Msa0781310:CDS | 35.0% | |
| GTAACACACATTTATTTGCG+TGG | + | chr5_2:63784671-63784690 | Msa0781310:intron | 35.0% | |
| GATGGTCAGATATTTACCTT+AGG | - | chr5_2:63784827-63784846 | None:intergenic | 35.0% | |
| !! | CGATGATTGCACTTTTGTTT+TGG | + | chr5_2:63784866-63784885 | Msa0781310:intron | 35.0% |
| GGAAAGAGTCAAATATAGCA+TGG | - | chr5_2:63785020-63785039 | None:intergenic | 35.0% | |
| AGCATTGTTTACATATCACC+TGG | + | chr5_2:63785093-63785112 | Msa0781310:intron | 35.0% | |
| !! | TTTGTATGGGAAAAGTACCA+AGG | - | chr5_2:63785140-63785159 | None:intergenic | 35.0% |
| !! | ATAAGTATTTGATGGTGAGC+AGG | - | chr5_2:63785192-63785211 | None:intergenic | 35.0% |
| ! | CGATTAGTTCCTTAATTCGT+GGG | + | chr5_2:63785229-63785248 | Msa0781310:intron | 35.0% |
| ! | GATTAGTTCCTTAATTCGTG+GGG | + | chr5_2:63785230-63785249 | Msa0781310:intron | 35.0% |
| ! | TCTGTCTTTTCTCACAACTA+AGG | - | chr5_2:63785265-63785284 | None:intergenic | 35.0% |
| AGTTGTGAGAAAAGACAGAA+TGG | + | chr5_2:63785266-63785285 | Msa0781310:intron | 35.0% | |
| GACGAGGAAAAATATCATTC+TGG | - | chr5_2:63785320-63785339 | None:intergenic | 35.0% | |
| AATAAGATCAAATTGGGACG+AGG | - | chr5_2:63785336-63785355 | None:intergenic | 35.0% | |
| CAATGATTAAGCGAGGAAAA+AGG | - | chr5_2:63785433-63785452 | None:intergenic | 35.0% | |
| TTGCTTTGATATTAGCACCA+TGG | + | chr5_2:63785522-63785541 | Msa0781310:intron | 35.0% | |
| TACCAACCAAAAATGACTAC+AGG | - | chr5_2:63785730-63785749 | None:intergenic | 35.0% | |
| TACATTTATGTGGGACACAT+GGG | - | chr5_2:63785928-63785947 | None:intergenic | 35.0% | |
| TTACATTTATGTGGGACACA+TGG | - | chr5_2:63785929-63785948 | None:intergenic | 35.0% | |
| ATGGTAATATTGGGGATTCT+AGG | + | chr5_2:63786304-63786323 | Msa0781310:three_prime_UTR | 35.0% | |
| CTGATCAAACTAGGATTTGA+TGG | + | chr5_2:63786335-63786354 | Msa0781310:three_prime_UTR | 35.0% | |
| !! | ATTTGATGGTAGCGATTTTG+AGG | + | chr5_2:63786349-63786368 | Msa0781310:three_prime_UTR | 35.0% |
| GAGGGGTTGAATTTATTAGA+TGG | + | chr5_2:63786408-63786427 | Msa0781310:three_prime_UTR | 35.0% | |
| TTATTAGATGGCTGTTGTTG+GGG | + | chr5_2:63786420-63786439 | Msa0781310:three_prime_UTR | 35.0% | |
| AAAAAGAAGGAGCCAGAAAC+TGG | + | chr5_2:63777682-63777701 | Msa0781310:five_prime_UTR | 40.0% | |
| GAGGAAGAGAGAGAGTTATT+AGG | - | chr5_2:63777737-63777756 | None:intergenic | 40.0% | |
| TTCAACCATGTCTTCTATGC+TGG | + | chr5_2:63777770-63777789 | Msa0781310:exon | 40.0% | |
| AACGAGTAACGAAGAAGAGT+TGG | - | chr5_2:63777808-63777827 | None:intergenic | 40.0% | |
| ! | CATTTCTGAAAATGCGGTTG+TGG | + | chr5_2:63777852-63777871 | Msa0781310:intron | 40.0% |
| ! | TTGATGTTGCTTACGAGTTG+TGG | - | chr5_2:63777936-63777955 | None:intergenic | 40.0% |
| TCAGTCACCATTTCTAACGA+CGG | + | chr5_2:63778038-63778057 | Msa0781310:CDS | 40.0% | |
| ATCAACTAAGATCTTGGCAG+CGG | - | chr5_2:63778099-63778118 | None:intergenic | 40.0% | |
| TGACTGTTTGAGAGAGCTAA+CGG | - | chr5_2:63778546-63778565 | None:intergenic | 40.0% | |
| GCAAAAGATTAAGGCCTGTT+TGG | + | chr5_2:63778602-63778621 | Msa0781310:intron | 40.0% | |
| GCTTATTTGAGCTTACCTAC+TGG | - | chr5_2:63778848-63778867 | None:intergenic | 40.0% | |
| TTACTTGGACCTGTTTGGAT+TGG | - | chr5_2:63778870-63778889 | None:intergenic | 40.0% | |
| CAAGTTTACTTGGACCTGTT+TGG | - | chr5_2:63778875-63778894 | None:intergenic | 40.0% | |
| ! | CATTGTTGTTGTGACTGTGA+AGG | + | chr5_2:63779101-63779120 | Msa0781310:intron | 40.0% |
| GCAAAGCCTTTCATTGAAGA+TGG | + | chr5_2:63779177-63779196 | Msa0781310:CDS | 40.0% | |
| TTATAGGAATGCATGCTCCT+TGG | + | chr5_2:63779227-63779246 | Msa0781310:CDS | 40.0% | |
| TGGACGCTGTAATTGCAATT+GGG | + | chr5_2:63779499-63779518 | Msa0781310:CDS | 40.0% | |
| TTGCAATTGGGACTGATGAT+AGG | + | chr5_2:63779511-63779530 | Msa0781310:CDS | 40.0% | |
| ACCATAATAGCTCACCAGTA+TGG | + | chr5_2:63779712-63779731 | Msa0781310:intron | 40.0% | |
| CTTCTGCAGGATCAAATTAG+AGG | + | chr5_2:63779822-63779841 | Msa0781310:intron | 40.0% | |
| AAATATGCTCGAGTGTGCTT+TGG | + | chr5_2:63779916-63779935 | Msa0781310:intron | 40.0% | |
| ! | TTGATGGCATGATAGAGATC+TGG | + | chr5_2:63780033-63780052 | Msa0781310:intron | 40.0% |
| GGTTTGACACTAAAACAGAC+CGG | - | chr5_2:63780154-63780173 | None:intergenic | 40.0% | |
| GGGAATGAAATGAATAGCAC+AGG | - | chr5_2:63780214-63780233 | None:intergenic | 40.0% | |
| TGTTGTTCCCTCCTCAATAA+AGG | + | chr5_2:63780445-63780464 | Msa0781310:intron | 40.0% | |
| CTAGGTAACCTTTATTGAGG+AGG | - | chr5_2:63780456-63780475 | None:intergenic | 40.0% | |
| TTCATGGGTAGTGAGTGAAA+TGG | - | chr5_2:63780795-63780814 | None:intergenic | 40.0% | |
| CTCACTACCCATGAATAAGT+AGG | + | chr5_2:63780800-63780819 | Msa0781310:intron | 40.0% | |
| CACTACCCATGAATAAGTAG+GGG | + | chr5_2:63780802-63780821 | Msa0781310:intron | 40.0% | |
| TCCAACCCCTACTTATTCAT+GGG | - | chr5_2:63780810-63780829 | None:intergenic | 40.0% | |
| ATCCAACCCCTACTTATTCA+TGG | - | chr5_2:63780811-63780830 | None:intergenic | 40.0% | |
| ACATAGTCATCCATCCACAA+AGG | + | chr5_2:63781031-63781050 | Msa0781310:intron | 40.0% | |
| AGGTCTCTTGGTCATTCTAT+TGG | + | chr5_2:63781051-63781070 | Msa0781310:intron | 40.0% | |
| GGTCTCTTGGTCATTCTATT+GGG | + | chr5_2:63781052-63781071 | Msa0781310:intron | 40.0% | |
| AAACAAACGGTGGGTCAATT+GGG | - | chr5_2:63781093-63781112 | None:intergenic | 40.0% | |
| CATAGGTTCAAACAAACGGT+GGG | - | chr5_2:63781102-63781121 | None:intergenic | 40.0% | |
| TCATAGGTTCAAACAAACGG+TGG | - | chr5_2:63781103-63781122 | None:intergenic | 40.0% | |
| ! | TGTAATCATAGGTGTCGTGT+TGG | + | chr5_2:63781178-63781197 | Msa0781310:intron | 40.0% |
| CGTGACTCATTTCTTGTCAA+TGG | + | chr5_2:63781443-63781462 | Msa0781310:CDS | 40.0% | |
| AGGACACGAGAAATAAGAGA+AGG | - | chr5_2:63781677-63781696 | None:intergenic | 40.0% | |
| CGTGGAAGTTTACAATTACG+TGG | - | chr5_2:63781934-63781953 | None:intergenic | 40.0% | |
| ! | GATAGAGACATTTTCTGTGC+TGG | + | chr5_2:63782006-63782025 | Msa0781310:intron | 40.0% |
| ATCTTCAATGGATGTCCATC+TGG | + | chr5_2:63782264-63782283 | Msa0781310:CDS | 40.0% | |
| AATTCAACTGTAGTTGCTGG+TGG | + | chr5_2:63782496-63782515 | Msa0781310:CDS | 40.0% | |
| GTTGTCAGATGGAAATAAGC+CGG | + | chr5_2:63782618-63782637 | Msa0781310:intron | 40.0% | |
| ! | TACCTCAAGAGCTTTTGCAT+AGG | - | chr5_2:63782699-63782718 | None:intergenic | 40.0% |
| CAGTGGCTGTTTATCAAAAG+TGG | + | chr5_2:63782923-63782942 | Msa0781310:intron | 40.0% | |
| TGTTATTGCAGGTTATTCCC+CGG | + | chr5_2:63783485-63783504 | Msa0781310:intron | 40.0% | |
| AGCATTGTCACATAATTGCC+GGG | - | chr5_2:63783506-63783525 | None:intergenic | 40.0% | |
| CAGCATTGTCACATAATTGC+CGG | - | chr5_2:63783507-63783526 | None:intergenic | 40.0% | |
| ATTTGGAGACGCTTAGAAGT+AGG | + | chr5_2:63783638-63783657 | Msa0781310:intron | 40.0% | |
| TTTGGAGACGCTTAGAAGTA+GGG | + | chr5_2:63783639-63783658 | Msa0781310:intron | 40.0% | |
| TGAATACAAGTTCAAGCTGG+AGG | + | chr5_2:63783713-63783732 | Msa0781310:intron | 40.0% | |
| TTTGCATGAACAGGAATAGC+TGG | + | chr5_2:63784073-63784092 | Msa0781310:intron | 40.0% | |
| !! | ATGATGATGGGGTGAAACAA+TGG | - | chr5_2:63784186-63784205 | None:intergenic | 40.0% |
| !! | TATGGTTTGCTTCTGAGCAA+GGG | - | chr5_2:63784294-63784313 | None:intergenic | 40.0% |
| !! | ATATGGTTTGCTTCTGAGCA+AGG | - | chr5_2:63784295-63784314 | None:intergenic | 40.0% |
| TGCTAATGTCCTATGCACTT+TGG | + | chr5_2:63784374-63784393 | Msa0781310:intron | 40.0% | |
| TAATGTCCTATGCACTTTGG+TGG | + | chr5_2:63784377-63784396 | Msa0781310:intron | 40.0% | |
| TTCAAGGTCAGAGAATCTAC+AGG | - | chr5_2:63784434-63784453 | None:intergenic | 40.0% | |
| AATTCATGTGTGCCTGTGTA+TGG | + | chr5_2:63784452-63784471 | Msa0781310:intron | 40.0% | |
| ATTCATGTGTGCCTGTGTAT+GGG | + | chr5_2:63784453-63784472 | Msa0781310:intron | 40.0% | |
| ! | TTACATGCTTGTTGAAGGTG+AGG | + | chr5_2:63784565-63784584 | Msa0781310:intron | 40.0% |
| ! | TACATGCTTGTTGAAGGTGA+GGG | + | chr5_2:63784566-63784585 | Msa0781310:intron | 40.0% |
| TGTGTTACCTTTACAACTGC+AGG | - | chr5_2:63784659-63784678 | None:intergenic | 40.0% | |
| TGCTATAAATGCTGCTACAG+AGG | + | chr5_2:63784760-63784779 | Msa0781310:CDS | 40.0% | |
| TTTCATCCACACTTAAGACC+AGG | - | chr5_2:63784793-63784812 | None:intergenic | 40.0% | |
| ATAGCATGGCACATATCCAA+AGG | - | chr5_2:63785006-63785025 | None:intergenic | 40.0% | |
| GACTGCATGTGAATTTATGC+AGG | - | chr5_2:63785041-63785060 | None:intergenic | 40.0% | |
| CTAGACTCTATACTCAAACC+AGG | - | chr5_2:63785114-63785133 | None:intergenic | 40.0% | |
| AGTATAGAGTCTAGTTGCCT+TGG | + | chr5_2:63785120-63785139 | Msa0781310:intron | 40.0% | |
| ! | GCGATTAGTTCCTTAATTCG+TGG | + | chr5_2:63785228-63785247 | Msa0781310:intron | 40.0% |
| TTCCTTAATTCGTGGGGATT+GGG | + | chr5_2:63785236-63785255 | Msa0781310:intron | 40.0% | |
| TTCTTGGTACAGCTACTACA+TGG | - | chr5_2:63785479-63785498 | None:intergenic | 40.0% | |
| AGCTATCAATGCGAATTCCA+TGG | - | chr5_2:63785542-63785561 | None:intergenic | 40.0% | |
| !!! | TGCCTGTAGTCATTTTTGGT+TGG | + | chr5_2:63785725-63785744 | Msa0781310:intron | 40.0% |
| TACCAGAAACATACATCCAG+TGG | - | chr5_2:63786233-63786252 | None:intergenic | 40.0% | |
| GAGCATCATCTGATCAAACT+AGG | + | chr5_2:63786326-63786345 | Msa0781310:three_prime_UTR | 40.0% | |
| GCTTACCAGCATAGAAGACA+TGG | - | chr5_2:63777778-63777797 | None:intergenic | 45.0% | |
| AAGGTACAGACACGTCTCAA+GGG | + | chr5_2:63777907-63777926 | Msa0781310:CDS | 45.0% | |
| TGACTGAGCCTTTATCATCG+TGG | - | chr5_2:63778025-63778044 | None:intergenic | 45.0% | |
| TCAACTAAGATCTTGGCAGC+GGG | - | chr5_2:63778098-63778117 | None:intergenic | 45.0% | |
| TGCTAAGTCTCAAGACTCTG+AGG | + | chr5_2:63778121-63778140 | Msa0781310:intron | 45.0% | |
| AGACTGTCTGAGAGAGCTTA+CGG | - | chr5_2:63778991-63779010 | None:intergenic | 45.0% | |
| TCTCTCAGACAGTCTGTCAA+GGG | + | chr5_2:63778996-63779015 | Msa0781310:intron | 45.0% | |
| GTTGTTGTGACTGTGAAGGT+TGG | + | chr5_2:63779105-63779124 | Msa0781310:intron | 45.0% | |
| AGAGCTAGCTGTTAGCATTG+AGG | + | chr5_2:63779371-63779390 | Msa0781310:CDS | 45.0% | |
| ! | GAGCTAGCTGTTAGCATTGA+GGG | + | chr5_2:63779372-63779391 | Msa0781310:CDS | 45.0% |
| GTGGACGCTGTAATTGCAAT+TGG | + | chr5_2:63779498-63779517 | Msa0781310:CDS | 45.0% | |
| GCCATACTGGTGAGCTATTA+TGG | - | chr5_2:63779716-63779735 | None:intergenic | 45.0% | |
| AATAGCTCACCAGTATGGCA+AGG | + | chr5_2:63779717-63779736 | Msa0781310:intron | 45.0% | |
| GTGTTTGAGTGTACTTCTGC+AGG | + | chr5_2:63779809-63779828 | Msa0781310:intron | 45.0% | |
| TTTCCTGCGGTTTATTCCAG+TGG | + | chr5_2:63780084-63780103 | Msa0781310:intron | 45.0% | |
| TATCCACTGGAATAAACCGC+AGG | - | chr5_2:63780090-63780109 | None:intergenic | 45.0% | |
| GAGGGAACAACAACAAAGAC+TGG | - | chr5_2:63780437-63780456 | None:intergenic | 45.0% | |
| ACCCATGAATAAGTAGGGGT+TGG | + | chr5_2:63780806-63780825 | Msa0781310:intron | 45.0% | |
| TATGTCTTGGCTCAAGTCAG+TGG | - | chr5_2:63781016-63781035 | None:intergenic | 45.0% | |
| GTGGATGGATGACTATGTCT+TGG | - | chr5_2:63781029-63781048 | None:intergenic | 45.0% | |
| ATCCATCCACAAAGGTCTCT+TGG | + | chr5_2:63781039-63781058 | Msa0781310:intron | 45.0% | |
| GAATGACCAAGAGACCTTTG+TGG | - | chr5_2:63781048-63781067 | None:intergenic | 45.0% | |
| CAAACAAACGGTGGGTCAAT+TGG | - | chr5_2:63781094-63781113 | None:intergenic | 45.0% | |
| ! | GGTTTTCTTCTACAGGTTCC+TGG | + | chr5_2:63781410-63781429 | Msa0781310:intron | 45.0% |
| TTTCTTCTACAGGTTCCTGG+TGG | + | chr5_2:63781413-63781432 | Msa0781310:intron | 45.0% | |
| GAACAACTTTGGCACCACTT+TGG | - | chr5_2:63781784-63781803 | None:intergenic | 45.0% | |
| ! | TATTGGTGATCTGGCAACAC+AGG | + | chr5_2:63781817-63781836 | Msa0781310:intron | 45.0% |
| AAAAGAGTTGCTGCTGCAAC+TGG | + | chr5_2:63782051-63782070 | Msa0781310:CDS | 45.0% | |
| AAAGAGTTGCTGCTGCAACT+GGG | + | chr5_2:63782052-63782071 | Msa0781310:CDS | 45.0% | |
| GAAGAACTATGGTGGCTGTT+TGG | - | chr5_2:63782290-63782309 | None:intergenic | 45.0% | |
| CCACATGTAACAGACCTGAT+CGG | - | chr5_2:63782322-63782341 | None:intergenic | 45.0% | |
| TGGAAATAAGCCGGTACCTA+AGG | + | chr5_2:63782627-63782646 | Msa0781310:CDS | 45.0% | |
| CTCCTATGCAAAAGCTCTTG+AGG | + | chr5_2:63782694-63782713 | Msa0781310:CDS | 45.0% | |
| CTATGCTCATCGTGGATGAA+GGG | - | chr5_2:63783343-63783362 | None:intergenic | 45.0% | |
| CGATATTCCTATGCTCATCG+TGG | - | chr5_2:63783351-63783370 | None:intergenic | 45.0% | |
| GCATTGTCACATAATTGCCG+GGG | - | chr5_2:63783505-63783524 | None:intergenic | 45.0% | |
| CGGCAATTATGTGACAATGC+TGG | + | chr5_2:63783505-63783524 | Msa0781310:CDS | 45.0% | |
| TTCTAAGCGTCTCCAAATGC+AGG | - | chr5_2:63783636-63783655 | None:intergenic | 45.0% | |
| GATCAGTTCAGGTCTACAAC+AGG | - | chr5_2:63783761-63783780 | None:intergenic | 45.0% | |
| CAAGAGCTTGAGATCAGTTC+AGG | - | chr5_2:63783772-63783791 | None:intergenic | 45.0% | |
| TTGAAGCCACCAAAGTGCAT+AGG | - | chr5_2:63784386-63784405 | None:intergenic | 45.0% | |
| CACAGGCACACATGAATTCA+AGG | - | chr5_2:63784450-63784469 | None:intergenic | 45.0% | |
| TGAATCAGCAATTCCACCAG+TGG | - | chr5_2:63784615-63784634 | None:intergenic | 45.0% | |
| GTTCCTTAATTCGTGGGGAT+TGG | + | chr5_2:63785235-63785254 | Msa0781310:intron | 45.0% | |
| ATCCCAATCCCCACGAATTA+AGG | - | chr5_2:63785241-63785260 | None:intergenic | 45.0% | |
| AAATGGAATCCTGCTGAGGA+TGG | - | chr5_2:63785297-63785316 | None:intergenic | 45.0% | |
| TTAAGCGAGGAAAAAGGGAG+AGG | - | chr5_2:63785427-63785446 | None:intergenic | 45.0% | |
| GCTGCTTCAATGATTAAGCG+AGG | - | chr5_2:63785440-63785459 | None:intergenic | 45.0% | |
| !! | GGGATGCCTGTAGTCATTTT+TGG | + | chr5_2:63785721-63785740 | Msa0781310:intron | 45.0% |
| TGTAATATGCGCAATGCCAC+TGG | + | chr5_2:63786214-63786233 | Msa0781310:three_prime_UTR | 45.0% | |
| TGCCACTGGATGTATGTTTC+TGG | + | chr5_2:63786228-63786247 | Msa0781310:three_prime_UTR | 45.0% | |
| !!! | ATGGTAGCGATTTTGAGGCA+TGG | + | chr5_2:63786354-63786373 | Msa0781310:three_prime_UTR | 45.0% |
| !! | AAATATGTAAAAAAAAATAT+TGG | + | chr5_2:63780596-63780615 | Msa0781310:intron | 5.0% |
| ! | ATGGTTGAAGACGGTGATGG+AGG | - | chr5_2:63777759-63777778 | None:intergenic | 50.0% |
| GACATGGTTGAAGACGGTGA+TGG | - | chr5_2:63777762-63777781 | None:intergenic | 50.0% | |
| ! | GAAGGTACAGACACGTCTCA+AGG | + | chr5_2:63777906-63777925 | Msa0781310:CDS | 50.0% |
| TAGGGTGGTTCGAACGACAT+CGG | - | chr5_2:63777976-63777995 | None:intergenic | 50.0% | |
| ATGAGTTTGTCCATACCGCG+AGG | - | chr5_2:63778002-63778021 | None:intergenic | 50.0% | |
| AGTAGCGCCGTCGTTAGAAA+TGG | - | chr5_2:63778048-63778067 | None:intergenic | 50.0% | |
| GTCACAAAACGTAGGCCAGT+AGG | + | chr5_2:63778830-63778849 | Msa0781310:intron | 50.0% | |
| CTGAGAGAGCTTACGGAAAC+AGG | - | chr5_2:63778984-63779003 | None:intergenic | 50.0% | |
| CTCTCTCAGACAGTCTGTCA+AGG | + | chr5_2:63778995-63779014 | Msa0781310:intron | 50.0% | |
| TGCAAGCAATACCACAGTGG+TGG | - | chr5_2:63779139-63779158 | None:intergenic | 50.0% | |
| AGCTGCAAGCAATACCACAG+TGG | - | chr5_2:63779142-63779161 | None:intergenic | 50.0% | |
| ATTGGAGAGCCTTGCCATAC+TGG | - | chr5_2:63779729-63779748 | None:intergenic | 50.0% | |
| GAATGTCCACTTTCGAGCAG+TGG | + | chr5_2:63780717-63780736 | Msa0781310:intron | 50.0% | |
| GACCAAGAGACCTTTGTGGA+TGG | - | chr5_2:63781044-63781063 | None:intergenic | 50.0% | |
| TGTCTGTGTCCGTGCTTCAT+AGG | - | chr5_2:63781119-63781138 | None:intergenic | 50.0% | |
| ! | CATAGGTGTCGTGTTGGTGT+CGG | + | chr5_2:63781184-63781203 | Msa0781310:intron | 50.0% |
| TATGAAGCACGGACACTCCT+CGG | - | chr5_2:63781246-63781265 | None:intergenic | 50.0% | |
| CAGGCGTGAGAGAACAACTT+TGG | - | chr5_2:63781795-63781814 | None:intergenic | 50.0% | |
| CAAAGTTGTTCTCTCACGCC+TGG | + | chr5_2:63781793-63781812 | Msa0781310:intron | 50.0% | |
| TTGCCAGATCACCAATAGCC+AGG | - | chr5_2:63781814-63781833 | None:intergenic | 50.0% | |
| AAGAGTTGCTGCTGCAACTG+GGG | + | chr5_2:63782053-63782072 | Msa0781310:CDS | 50.0% | |
| ACAGCCACCATAGTTCTTCG+TGG | + | chr5_2:63782291-63782310 | Msa0781310:CDS | 50.0% | |
| TCCACCACGAAGAACTATGG+TGG | - | chr5_2:63782298-63782317 | None:intergenic | 50.0% | |
| CCGATCAGGTCTGTTACATG+TGG | + | chr5_2:63782319-63782338 | Msa0781310:intron | 50.0% | |
| TCAACTGTAGTTGCTGGTGG+AGG | + | chr5_2:63782499-63782518 | Msa0781310:CDS | 50.0% | |
| CAGTGGCTGTTTGGCAAAAG+TGG | + | chr5_2:63782807-63782826 | Msa0781310:intron | 50.0% | |
| CCTATGCTCATCGTGGATGA+AGG | - | chr5_2:63783344-63783363 | None:intergenic | 50.0% | |
| CCTTCATCCACGATGAGCAT+AGG | + | chr5_2:63783341-63783360 | Msa0781310:intron | 50.0% | |
| ACGAAGGTCAACCAACCAGA+AGG | - | chr5_2:63783580-63783599 | None:intergenic | 50.0% | |
| GGGGTGAAACAATGGTCAAG+AGG | - | chr5_2:63784178-63784197 | None:intergenic | 50.0% | |
| TGTCAGGTACACCCATACAC+AGG | - | chr5_2:63784467-63784486 | None:intergenic | 50.0% | |
| !! | AAGGTGAGGGTGCTCCATTT+GGG | + | chr5_2:63784579-63784598 | Msa0781310:intron | 50.0% |
| !! | AGCTTGCCTGGTCTTAAGTG+TGG | + | chr5_2:63784784-63784803 | Msa0781310:CDS | 50.0% |
| ATGGTGTTTCCATCCTCAGC+AGG | + | chr5_2:63785285-63785304 | Msa0781310:intron | 50.0% | |
| CTGGAAATGGAATCCTGCTG+AGG | - | chr5_2:63785301-63785320 | None:intergenic | 50.0% | |
| ! | ATGTAGTCCGAGAGTGCACA+AGG | + | chr5_2:63786063-63786082 | Msa0781310:intron | 50.0% |
| ATCTACGCATTCCTCGTCCA+CGG | - | chr5_2:63786143-63786162 | None:intergenic | 50.0% | |
| !! | GTTGAAGACGGTGATGGAGG+AGG | - | chr5_2:63777756-63777775 | None:intergenic | 55.0% |
| GGTTCGAACGACATCGGCAA+CGG | - | chr5_2:63777970-63777989 | None:intergenic | 55.0% | |
| GATGTCGTTCGAACCACCCT+AGG | + | chr5_2:63777975-63777994 | Msa0781310:CDS | 55.0% | |
| GTGACTGTGAAGGTTGGCGA+TGG | + | chr5_2:63779111-63779130 | Msa0781310:intron | 55.0% | |
| AATAGCACAGGCACAGCGAG+TGG | - | chr5_2:63780202-63780221 | None:intergenic | 55.0% | |
| GAGCAACCACTGCTCGAAAG+TGG | - | chr5_2:63780726-63780745 | None:intergenic | 55.0% | |
| GAGTCACGCATGTTACCACC+AGG | - | chr5_2:63781431-63781450 | None:intergenic | 55.0% | |
| GTTCTCTCACGCCTGGCTAT+TGG | + | chr5_2:63781800-63781819 | Msa0781310:intron | 55.0% | |
| ! | ACGCCTGGCTATTGGTGATC+TGG | + | chr5_2:63781808-63781827 | Msa0781310:intron | 55.0% |
| AGAGTTGCTGCTGCAACTGG+GGG | + | chr5_2:63782054-63782073 | Msa0781310:CDS | 55.0% | |
| ATGGTGGCTGTTTGGCCAGA+TGG | - | chr5_2:63782282-63782301 | None:intergenic | 55.0% | |
| GCCACCATAGTTCTTCGTGG+TGG | + | chr5_2:63782294-63782313 | Msa0781310:CDS | 55.0% | |
| GGCTCCACCACGAAGAACTA+TGG | - | chr5_2:63782301-63782320 | None:intergenic | 55.0% | |
| GTGCATGCTGCCTTAGGTAC+CGG | - | chr5_2:63782640-63782659 | None:intergenic | 55.0% | |
| TTGTGCGTGCATGCTGCCTT+AGG | - | chr5_2:63782646-63782665 | None:intergenic | 55.0% | |
| CAGCATGCACGCACAATAGC+TGG | + | chr5_2:63782650-63782669 | Msa0781310:CDS | 55.0% | |
| AAGGGACTGCAGTGGCTGTT+TGG | + | chr5_2:63782798-63782817 | Msa0781310:intron | 55.0% | |
| CAGAAACACGCGCTTCCTTC+TGG | + | chr5_2:63783562-63783581 | Msa0781310:CDS | 55.0% | |
| AACACGCGCTTCCTTCTGGT+TGG | + | chr5_2:63783566-63783585 | Msa0781310:intron | 55.0% | |
| GTTCAGGTCTACAACAGGCC+AGG | - | chr5_2:63783756-63783775 | None:intergenic | 55.0% | |
| !! | GAAGGTGAGGGTGCTCCATT+TGG | + | chr5_2:63784578-63784597 | Msa0781310:intron | 55.0% |
| !! | AGGTGAGGGTGCTCCATTTG+GGG | + | chr5_2:63784580-63784599 | Msa0781310:intron | 55.0% |
| GTGGCTATGTCGACCCCAAA+TGG | - | chr5_2:63784596-63784615 | None:intergenic | 55.0% | |
| ! | TTTGGGGTCGACATAGCCAC+TGG | + | chr5_2:63784596-63784615 | Msa0781310:CDS | 55.0% |
| TGCAGGCTCCCAGACAAAGT+TGG | - | chr5_2:63784642-63784661 | None:intergenic | 55.0% | |
| CTGGGAGCCTGCAGTTGTAA+AGG | + | chr5_2:63784649-63784668 | Msa0781310:CDS | 55.0% | |
| AGCCTCTCCTTGTGCACTCT+CGG | - | chr5_2:63786073-63786092 | None:intergenic | 55.0% | |
| GTCCATACCGCGAGGACCTA+GGG | - | chr5_2:63777994-63778013 | None:intergenic | 60.0% | |
| TGTCCATACCGCGAGGACCT+AGG | - | chr5_2:63777995-63778014 | None:intergenic | 60.0% | |
| TGGCGATGGAACCACCACTG+TGG | + | chr5_2:63779125-63779144 | Msa0781310:intron | 60.0% | |
| CACGGACACAGACACCGACA+CGG | + | chr5_2:63781125-63781144 | Msa0781310:intron | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr5_2:63781224-63781243 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr5_2:63781230-63781249 | None:intergenic | 60.0% |
| GCACGGACACTCCTCGGATT+AGG | - | chr5_2:63781240-63781259 | None:intergenic | 60.0% | |
| ! | TCTTCGTGGTGGAGCCGATC+AGG | + | chr5_2:63782305-63782324 | Msa0781310:CDS | 60.0% |
| CTCATCGTGGATGAAGGGCG+TGG | - | chr5_2:63783338-63783357 | None:intergenic | 60.0% | |
| TGCTACAGAGGCAGCTTGCC+TGG | + | chr5_2:63784772-63784791 | Msa0781310:CDS | 60.0% | |
| ! | GTCCGAGAGTGCACAAGGAG+AGG | + | chr5_2:63786068-63786087 | Msa0781310:intron | 60.0% |
| AGAGGCTGCTGCAAGTGCCA+TGG | + | chr5_2:63786086-63786105 | Msa0781310:CDS | 60.0% | |
| GAGGCTGCTGCAAGTGCCAT+GGG | + | chr5_2:63786087-63786106 | Msa0781310:CDS | 60.0% | |
| CGAACCACCCTAGGTCCTCG+CGG | + | chr5_2:63777984-63778003 | Msa0781310:CDS | 65.0% | |
| CATACCGCGAGGACCTAGGG+TGG | - | chr5_2:63777991-63778010 | None:intergenic | 65.0% | |
| CACCCTAGGTCCTCGCGGTA+TGG | + | chr5_2:63777989-63778008 | Msa0781310:CDS | 65.0% | |
| ACCGGGACACGCCTAATCCG+AGG | + | chr5_2:63781226-63781245 | Msa0781310:intron | 65.0% | |
| GGGGTCGACATAGCCACTGG+TGG | + | chr5_2:63784599-63784618 | Msa0781310:CDS | 65.0% | |
| GCTGCTGCAAGTGCCATGGG+AGG | + | chr5_2:63786090-63786109 | Msa0781310:CDS | 65.0% | |
| GCAAGTGCCATGGGAGGCAG+AGG | + | chr5_2:63786096-63786115 | Msa0781310:CDS | 65.0% | |
| GCATTCCTCGTCCACGGCCA+CGG | - | chr5_2:63786137-63786156 | None:intergenic | 65.0% | |
| CTCCGACGCGTGTCCGACAC+CGG | + | chr5_2:63781208-63781227 | Msa0781310:intron | 70.0% | |
| TCCGACGCGTGTCCGACACC+GGG | + | chr5_2:63781209-63781228 | Msa0781310:intron | 70.0% | |
| ! | TCCCGGTGTCGGACACGCGT+CGG | - | chr5_2:63781213-63781232 | None:intergenic | 70.0% |
| GCCATGGGAGGCAGAGGTCG+CGG | + | chr5_2:63786102-63786121 | Msa0781310:CDS | 70.0% | |
| TCCGCGACCTCTGCCTCCCA+TGG | - | chr5_2:63786106-63786125 | None:intergenic | 70.0% | |
| ATGGGAGGCAGAGGTCGCGG+AGG | + | chr5_2:63786105-63786124 | Msa0781310:CDS | 70.0% | |
| GGTCGCGGAGGTGGTTTCCG+TGG | + | chr5_2:63786117-63786136 | Msa0781310:CDS | 70.0% | |
| GGAGGTGGTTTCCGTGGCCG+TGG | + | chr5_2:63786123-63786142 | Msa0781310:CDS | 70.0% | |
| GGTTTCCGTGGCCGTGGACG+AGG | + | chr5_2:63786129-63786148 | Msa0781310:CDS | 70.0% | |
| GGAGGCAGAGGTCGCGGAGG+TGG | + | chr5_2:63786108-63786127 | Msa0781310:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 63777652 | 63786569 | 63777652 | ID=Msa0781310;Name=Msa0781310 |
| chr5_2 | mRNA | 63777652 | 63786569 | 63777652 | ID=Msa0781310-mRNA-1;Parent=Msa0781310;Name=Msa0781310-mRNA-1;_AED=0.13;_eAED=0.13;_QI=125|0.83|0.76|1|0.83|0.76|13|405|489 |
| chr5_2 | exon | 63777652 | 63777791 | 63777652 | ID=Msa0781310-mRNA-1:exon:18926;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63777882 | 63778126 | 63777882 | ID=Msa0781310-mRNA-1:exon:18927;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63779173 | 63779248 | 63779173 | ID=Msa0781310-mRNA-1:exon:18928;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63779354 | 63779557 | 63779354 | ID=Msa0781310-mRNA-1:exon:18929;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63781425 | 63781594 | 63781425 | ID=Msa0781310-mRNA-1:exon:18930;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63782011 | 63782113 | 63782011 | ID=Msa0781310-mRNA-1:exon:18931;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63782207 | 63782326 | 63782207 | ID=Msa0781310-mRNA-1:exon:18932;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63782433 | 63782531 | 63782433 | ID=Msa0781310-mRNA-1:exon:18933;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63782626 | 63782715 | 63782626 | ID=Msa0781310-mRNA-1:exon:18934;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63783496 | 63783583 | 63783496 | ID=Msa0781310-mRNA-1:exon:18935;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63784582 | 63784670 | 63784582 | ID=Msa0781310-mRNA-1:exon:18936;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63784755 | 63784829 | 63784755 | ID=Msa0781310-mRNA-1:exon:18937;Parent=Msa0781310-mRNA-1 |
| chr5_2 | exon | 63786069 | 63786569 | 63786069 | ID=Msa0781310-mRNA-1:exon:18938;Parent=Msa0781310-mRNA-1 |
| chr5_2 | five_prime_UTR | 63777652 | 63777776 | 63777652 | ID=Msa0781310-mRNA-1:five_prime_utr;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63777777 | 63777791 | 63777777 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63777882 | 63778126 | 63777882 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63779173 | 63779248 | 63779173 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63779354 | 63779557 | 63779354 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63781425 | 63781594 | 63781425 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63782011 | 63782113 | 63782011 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63782207 | 63782326 | 63782207 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63782433 | 63782531 | 63782433 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63782626 | 63782715 | 63782626 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63783496 | 63783583 | 63783496 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63784582 | 63784670 | 63784582 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63784755 | 63784829 | 63784755 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | CDS | 63786069 | 63786164 | 63786069 | ID=Msa0781310-mRNA-1:cds;Parent=Msa0781310-mRNA-1 |
| chr5_2 | three_prime_UTR | 63786165 | 63786569 | 63786165 | ID=Msa0781310-mRNA-1:three_prime_utr;Parent=Msa0781310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
