Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860860 | XP_003617067.1 | 82.936 | 545 | 1 | 2 | 62 | 514 | 17 | 561 | 0.0 | 877 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860860 | sp|Q9SF16|TCPH_ARATH | 76.583 | 521 | 30 | 2 | 62 | 490 | 17 | 537 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860860 | G7K2W1 | 82.936 | 545 | 1 | 2 | 62 | 514 | 17 | 561 | 0.0 | 877 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0717380 | Msa0860860 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
| Msa0781310 | Msa0860860 | 0.961568 | 7.475948e-120 | -8.615850e-47 |
| Msa0786660 | Msa0860860 | 0.810233 | 1.276499e-50 | -8.615850e-47 |
| Msa0799830 | Msa0860860 | 0.805080 | 1.586313e-49 | -8.615850e-47 |
| Msa0138890 | Msa0860860 | 0.860197 | 2.443822e-63 | -8.615850e-47 |
| Msa0382210 | Msa0860860 | 0.806448 | 8.186320e-50 | -8.615850e-47 |
| Msa0265250 | Msa0860860 | 0.852393 | 4.754905e-61 | -8.615850e-47 |
| Msa0297830 | Msa0860860 | 0.825009 | 5.922226e-54 | -8.615850e-47 |
| Msa0335840 | Msa0860860 | 0.829675 | 4.508409e-55 | -8.615850e-47 |
| Msa0596370 | Msa0860860 | 0.816244 | 6.111251e-52 | -8.615850e-47 |
| Msa0860860 | Msa0888910 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0860860 | Msa1040160 | 0.809336 | 1.990106e-50 | -8.615850e-47 |
| Msa0860860 | Msa1082170 | 0.811382 | 7.198033e-51 | -8.615850e-47 |
| Msa0860860 | Msa1083370 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
| Msa0860860 | Msa1089220 | 0.846579 | 1.987489e-59 | -8.615850e-47 |
| Msa0860860 | Msa1091290 | 0.807819 | 4.194529e-50 | -8.615850e-47 |
| Msa0860860 | Msa1218170 | 0.840126 | 1.049156e-57 | -8.615850e-47 |
| Msa0860860 | Msa1332250 | 0.811148 | 8.091703e-51 | -8.615850e-47 |
| Msa0860860 | Msa1364110 | 0.802107 | 6.564435e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860860 | MtrunA17_Chr5g0440381 | 82.936 | 545 | 1 | 2 | 62 | 514 | 17 | 561 | 0.0 | 877 |
| Msa0860860 | MtrunA17_Chr8g0380331 | 33.015 | 524 | 247 | 12 | 66 | 485 | 17 | 540 | 7.57e-71 | 235 |
| Msa0860860 | MtrunA17_Chr7g0241881 | 31.801 | 522 | 251 | 12 | 55 | 479 | 3 | 516 | 4.27e-67 | 225 |
| Msa0860860 | MtrunA17_Chr7g0272821 | 32.359 | 513 | 246 | 11 | 61 | 479 | 11 | 516 | 1.14e-65 | 221 |
| Msa0860860 | MtrunA17_Chr2g0282161 | 28.902 | 519 | 260 | 9 | 72 | 489 | 23 | 533 | 1.33e-62 | 214 |
| Msa0860860 | MtrunA17_Chr3g0123341 | 26.824 | 507 | 264 | 9 | 72 | 479 | 32 | 530 | 7.19e-46 | 168 |
| Msa0860860 | MtrunA17_Chr1g0160221 | 24.851 | 503 | 280 | 12 | 70 | 479 | 26 | 523 | 3.01e-38 | 147 |
| Msa0860860 | MtrunA17_Chr6g0461541 | 24.254 | 503 | 283 | 10 | 70 | 479 | 23 | 520 | 1.42e-36 | 142 |
| Msa0860860 | MtrunA17_Chr7g0214841 | 23.007 | 552 | 290 | 11 | 37 | 480 | 2 | 526 | 2.82e-27 | 115 |
| Msa0860860 | MtrunA17_Chr3g0139481 | 35.135 | 185 | 116 | 3 | 296 | 479 | 291 | 472 | 1.34e-26 | 112 |
| Msa0860860 | MtrunA17_Chr3g0139481 | 49.367 | 79 | 40 | 0 | 60 | 138 | 16 | 94 | 3.31e-15 | 78.2 |
| Msa0860860 | MtrunA17_Chr8g0392171 | 27.957 | 279 | 156 | 11 | 203 | 447 | 10 | 277 | 1.75e-20 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860860 | AT3G11830.1 | 76.583 | 521 | 30 | 2 | 62 | 490 | 17 | 537 | 0.0 | 751 |
| Msa0860860 | AT3G11830.2 | 76.200 | 521 | 30 | 3 | 62 | 490 | 17 | 535 | 0.0 | 742 |
| Msa0860860 | AT3G20050.1 | 32.721 | 544 | 261 | 12 | 51 | 490 | 2 | 544 | 1.99e-74 | 245 |
| Msa0860860 | AT5G20890.1 | 31.094 | 521 | 256 | 12 | 55 | 479 | 3 | 516 | 1.08e-65 | 222 |
| Msa0860860 | AT5G26360.1 | 29.344 | 518 | 257 | 10 | 73 | 489 | 24 | 533 | 1.11e-58 | 204 |
| Msa0860860 | AT1G24510.1 | 25.933 | 509 | 270 | 9 | 72 | 481 | 32 | 532 | 5.42e-45 | 166 |
| Msa0860860 | AT3G03960.1 | 24.254 | 503 | 283 | 11 | 70 | 479 | 29 | 526 | 7.09e-37 | 144 |
| Msa0860860 | AT1G24510.3 | 24.370 | 476 | 253 | 9 | 105 | 481 | 12 | 479 | 1.59e-33 | 133 |
| Msa0860860 | AT1G24510.2 | 25.187 | 401 | 235 | 8 | 138 | 481 | 64 | 456 | 3.79e-29 | 120 |
| Msa0860860 | AT3G02530.1 | 21.898 | 548 | 301 | 9 | 37 | 480 | 2 | 526 | 7.03e-28 | 117 |
| Msa0860860 | AT3G18190.1 | 35.676 | 185 | 115 | 3 | 296 | 479 | 352 | 533 | 4.67e-27 | 115 |
| Msa0860860 | AT3G18190.1 | 34.483 | 203 | 88 | 3 | 72 | 230 | 32 | 233 | 5.93e-22 | 99.8 |
| Msa0860860 | AT5G16070.1 | 22.303 | 547 | 299 | 10 | 37 | 480 | 2 | 525 | 2.66e-25 | 109 |
Find 138 sgRNAs with CRISPR-Local
Find 550 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGAAGAGAGAGAGTTATT+AGG | 0.187281 | 5_4:-59938941 | None:intergenic |
| ACACTTTCTTCAAAACTTAT+AGG | 0.194659 | 5_4:+59940653 | Msa0860860:CDS |
| ATTCATTTGCCAACTTTGTC+TGG | 0.204932 | 5_4:+59945845 | Msa0860860:CDS |
| CTTATTTGCTTGAAGGTTCT+TGG | 0.219293 | 5_4:+59943406 | Msa0860860:intron |
| AGGAAGAGAGAGAGTTATTA+GGG | 0.227511 | 5_4:-59938940 | None:intergenic |
| TAGCCTTATGTAGTAATCTA+TGG | 0.238863 | 5_4:+59947720 | Msa0860860:three_prime_UTR |
| AAAGGAATTCTTTGCATCTA+TGG | 0.289996 | 5_4:+59940682 | Msa0860860:CDS |
| TGCCACTGGATGTATGTTTC+TGG | 0.292353 | 5_4:+59947435 | Msa0860860:three_prime_UTR |
| GAAATATTGGCACCTTATTT+CGG | 0.304281 | 5_4:-59942799 | None:intergenic |
| AAAAGAGTTGCTGCTGCAAC+TGG | 0.305439 | 5_4:+59943265 | Msa0860860:CDS |
| GAAGGTGAGGGTGCTCCATT+TGG | 0.310401 | 5_4:+59945793 | Msa0860860:intron |
| CAGAAACACGCGCTTCCTTC+TGG | 0.317305 | 5_4:+59944776 | Msa0860860:CDS |
| TGGTATGAAATGGTAATATT+GGG | 0.318845 | 5_4:+59947502 | Msa0860860:three_prime_UTR |
| TTTATCTACAGATGTTGATA+TGG | 0.326864 | 5_4:+59947482 | Msa0860860:three_prime_UTR |
| GAGGGGTTGAATTTATTAGA+TGG | 0.333080 | 5_4:+59947615 | Msa0860860:three_prime_UTR |
| ATGGTATGAAATGGTAATAT+TGG | 0.350835 | 5_4:+59947501 | Msa0860860:three_prime_UTR |
| AGAAAGAAAATGCCGAAATA+AGG | 0.352104 | 5_4:+59942787 | Msa0860860:CDS |
| AAGGTGAGGGTGCTCCATTT+GGG | 0.365916 | 5_4:+59945794 | Msa0860860:intron |
| TGCTACAGAGGCAGCTTGCC+TGG | 0.375773 | 5_4:+59945987 | Msa0860860:CDS |
| ATGCAATCATGATTGTTAGA+AGG | 0.376275 | 5_4:+59943678 | Msa0860860:CDS |
| GAGCTAGCTGTTAGCATTGA+GGG | 0.383111 | 5_4:+59940581 | Msa0860860:CDS |
| CTGATCAAACTAGGATTTGA+TGG | 0.387094 | 5_4:+59947542 | Msa0860860:three_prime_UTR |
| CAGCATTGTCACATAATTGC+CGG | 0.405508 | 5_4:-59944718 | None:intergenic |
| TTGTGCGTGCATGCTGCCTT+AGG | 0.406875 | 5_4:-59943857 | None:intergenic |
| CAGCATGCACGCACAATAGC+TGG | 0.407586 | 5_4:+59943864 | Msa0860860:CDS |
| AAACTCATCCACGATGATAA+AGG | 0.411477 | 5_4:+59939231 | Msa0860860:CDS |
| TTGCAATTGGGACTGATGAT+AGG | 0.412581 | 5_4:+59940720 | Msa0860860:CDS |
| GAAGAACTATGGTGGCTGTT+TGG | 0.419517 | 5_4:-59943501 | None:intergenic |
| AGCAATATCAACTAAGATCT+TGG | 0.420275 | 5_4:-59939319 | None:intergenic |
| TATCTAAATACTTAGTGTTA+AGG | 0.421493 | 5_4:-59947679 | None:intergenic |
| GGAGGCAGAGGTCGCGGAGG+TGG | 0.424216 | 5_4:+59947317 | Msa0860860:CDS |
| GAAGAGAAGAAAAGTTTGCT+TGG | 0.426567 | 5_4:+59940614 | Msa0860860:CDS |
| GGCTCCACCACGAAGAACTA+TGG | 0.429012 | 5_4:-59943512 | None:intergenic |
| GTGGACGCTGTAATTGCAAT+TGG | 0.430540 | 5_4:+59940707 | Msa0860860:CDS |
| ATCTTCAATGGATGTCCATC+TGG | 0.432018 | 5_4:+59943478 | Msa0860860:CDS |
| ATATGAAAATGTCTTCTTGA+AGG | 0.433340 | 5_4:-59942685 | None:intergenic |
| TTCATTTGCCAACTTTGTCT+GGG | 0.434603 | 5_4:+59945846 | Msa0860860:CDS |
| GATGATAGGTTAAACATGAT+TGG | 0.435001 | 5_4:+59940734 | Msa0860860:CDS |
| TCTTCGTGGTGGAGCCGATC+AGG | 0.435496 | 5_4:+59943519 | Msa0860860:CDS |
| TTTATTAGATGGCTGTTGTT+GGG | 0.438626 | 5_4:+59947626 | Msa0860860:three_prime_UTR |
| AGCCTCTCCTTGTGCACTCT+CGG | 0.442120 | 5_4:-59947279 | None:intergenic |
| ATGGTAATATTGGGGATTCT+AGG | 0.449197 | 5_4:+59947511 | Msa0860860:three_prime_UTR |
| AGTAGCGCCGTCGTTAGAAA+TGG | 0.453461 | 5_4:-59939262 | None:intergenic |
| ATTCTTTGCATCTATGGTTG+TGG | 0.462064 | 5_4:+59940688 | Msa0860860:CDS |
| TGTAATATGCGCAATGCCAC+TGG | 0.462560 | 5_4:+59947421 | Msa0860860:three_prime_UTR |
| GGTTTCCGTGGCCGTGGACG+AGG | 0.463717 | 5_4:+59947338 | Msa0860860:CDS |
| CACCCTAGGTCCTCGCGGTA+TGG | 0.466201 | 5_4:+59939206 | Msa0860860:CDS |
| CGTGACTCATTTCTTGTCAA+TGG | 0.467306 | 5_4:+59942657 | Msa0860860:CDS |
| TTTGGATCGAGAAACTTCTT+GGG | 0.472807 | 5_4:-59942726 | None:intergenic |
| ATCAACTAAGATCTTGGCAG+CGG | 0.472906 | 5_4:-59939313 | None:intergenic |
| ACTATTACTTAATGTTGAGT+TGG | 0.473212 | 5_4:+59942752 | Msa0860860:CDS |
| GAGAGATTCAACATCTTCAA+TGG | 0.474859 | 5_4:+59943466 | Msa0860860:CDS |
| TTCCCATAGATTACTACATA+AGG | 0.479151 | 5_4:-59947723 | None:intergenic |
| AAAACTTATAGGCGGAGAAA+AGG | 0.483886 | 5_4:+59940664 | Msa0860860:CDS |
| ATTTATTAGATGGCTGTTGT+TGG | 0.484825 | 5_4:+59947625 | Msa0860860:three_prime_UTR |
| GTGGCTATGTCGACCCCAAA+TGG | 0.487755 | 5_4:-59945808 | None:intergenic |
| TTCAACCATGTCTTCTATGC+TGG | 0.488113 | 5_4:+59938977 | Msa0860860:CDS |
| TGGAAATAAGCCGGTACCTA+AGG | 0.491090 | 5_4:+59943841 | Msa0860860:CDS |
| AGCATTGTCACATAATTGCC+GGG | 0.495335 | 5_4:-59944717 | None:intergenic |
| TGTGTTACCTTTACAACTGC+AGG | 0.496824 | 5_4:-59945871 | None:intergenic |
| AAGAATTCAACTGTAGTTGC+TGG | 0.502547 | 5_4:+59943707 | Msa0860860:CDS |
| CTGGGAGCCTGCAGTTGTAA+AGG | 0.504005 | 5_4:+59945864 | Msa0860860:CDS |
| TCCGCGACCTCTGCCTCCCA+TGG | 0.505514 | 5_4:-59947312 | None:intergenic |
| TTATTAGATGGCTGTTGTTG+GGG | 0.507293 | 5_4:+59947627 | Msa0860860:three_prime_UTR |
| AGAGGCTGCTGCAAGTGCCA+TGG | 0.507829 | 5_4:+59947295 | Msa0860860:CDS |
| GTCCATACCGCGAGGACCTA+GGG | 0.509242 | 5_4:-59939208 | None:intergenic |
| GAGGCTGCTGCAAGTGCCAT+GGG | 0.510487 | 5_4:+59947296 | Msa0860860:CDS |
| GCCATGGGAGGCAGAGGTCG+CGG | 0.511189 | 5_4:+59947311 | Msa0860860:CDS |
| TGTCCATACCGCGAGGACCT+AGG | 0.512184 | 5_4:-59939209 | None:intergenic |
| CTCCTATGCAAAAGCTCTTG+AGG | 0.514576 | 5_4:+59943908 | Msa0860860:CDS |
| GCAAGTGCCATGGGAGGCAG+AGG | 0.514740 | 5_4:+59947305 | Msa0860860:CDS |
| TGGACGCTGTAATTGCAATT+GGG | 0.522784 | 5_4:+59940708 | Msa0860860:CDS |
| GTGCATGCTGCCTTAGGTAC+CGG | 0.523446 | 5_4:-59943851 | None:intergenic |
| TGCTATAAATGCTGCTACAG+AGG | 0.524498 | 5_4:+59945975 | Msa0860860:CDS |
| TGCAATCATGATTGTTAGAA+GGG | 0.525847 | 5_4:+59943679 | Msa0860860:CDS |
| ATGGTGGCTGTTTGGCCAGA+TGG | 0.526129 | 5_4:-59943493 | None:intergenic |
| CGGCAATTATGTGACAATGC+TGG | 0.526950 | 5_4:+59944719 | Msa0860860:CDS |
| AAACATGATTGGAATAAAGA+AGG | 0.527009 | 5_4:+59940745 | Msa0860860:CDS |
| GATGTTGATATGGTATGAAA+TGG | 0.530542 | 5_4:+59947492 | Msa0860860:three_prime_UTR |
| AATAAAATGAAAATGAAGCC+TGG | 0.531904 | 5_4:+59938803 | None:intergenic |
| AAGAGTTGCTGCTGCAACTG+GGG | 0.532157 | 5_4:+59943267 | Msa0860860:CDS |
| GGAGGTGGTTTCCGTGGCCG+TGG | 0.540350 | 5_4:+59947332 | Msa0860860:CDS |
| TGTTATTGCAGGTTATTCCC+CGG | 0.542735 | 5_4:+59944699 | Msa0860860:intron |
| AAAGAGTTGCTGCTGCAACT+GGG | 0.544621 | 5_4:+59943266 | Msa0860860:CDS |
| GTTGAAGACGGTGATGGAGG+AGG | 0.544625 | 5_4:-59938960 | None:intergenic |
| TTGATGTTGCTTACGAGTTG+AGG | 0.547025 | 5_4:-59939150 | None:intergenic |
| GAGCATCATCTGATCAAACT+AGG | 0.549384 | 5_4:+59947533 | Msa0860860:three_prime_UTR |
| GCATTCCTCGTCCACGGCCA+CGG | 0.551786 | 5_4:-59947343 | None:intergenic |
| AGCCTTATGTAGTAATCTAT+GGG | 0.556362 | 5_4:+59947721 | Msa0860860:three_prime_UTR |
| AGAGCTAGCTGTTAGCATTG+AGG | 0.556400 | 5_4:+59940580 | Msa0860860:CDS |
| TGATTAGAAATGTGTTCTGA+TGG | 0.557936 | 5_4:+59947371 | Msa0860860:exon |
| GGTTCGAACGACGTCGGCGA+CGG | 0.561806 | 5_4:-59939184 | None:intergenic |
| TGCAGGCTCCCAGACAAAGT+TGG | 0.565410 | 5_4:-59945854 | None:intergenic |
| TGTCAATAACATTATTGATG+AGG | 0.570369 | 5_4:+59943306 | Msa0860860:CDS |
| TCAACTAAGATCTTGGCAGC+GGG | 0.578759 | 5_4:-59939312 | None:intergenic |
| GGTATGAAATGGTAATATTG+GGG | 0.582148 | 5_4:+59947503 | Msa0860860:three_prime_UTR |
| GTTGTCAGATGGAAATAAGC+CGG | 0.584185 | 5_4:+59943832 | Msa0860860:intron |
| GACGTCGTTCGAACCACCCT+AGG | 0.584290 | 5_4:+59939192 | Msa0860860:CDS |
| TCAACTGTAGTTGCTGGTGG+AGG | 0.588207 | 5_4:+59943713 | Msa0860860:CDS |
| ACAGCCACCATAGTTCTTCG+TGG | 0.595963 | 5_4:+59943505 | Msa0860860:CDS |
| TTTGGGGTCGACATAGCCAC+TGG | 0.598540 | 5_4:+59945811 | Msa0860860:CDS |
| ATGGTTGAAGACGGTGATGG+AGG | 0.605889 | 5_4:-59938963 | None:intergenic |
| AGGTGAGGGTGCTCCATTTG+GGG | 0.609656 | 5_4:+59945795 | Msa0860860:intron |
| GTCCGAGAGTGCACAAGGAG+AGG | 0.612084 | 5_4:+59947277 | Msa0860860:intron |
| GGTCGCGGAGGTGGTTTCCG+TGG | 0.612096 | 5_4:+59947326 | Msa0860860:CDS |
| AATTCAACTGTAGTTGCTGG+TGG | 0.612307 | 5_4:+59943710 | Msa0860860:CDS |
| ATGTAGTCCGAGAGTGCACA+AGG | 0.618575 | 5_4:+59947272 | Msa0860860:intron |
| CTTTCTTCAAAACTTATAGG+CGG | 0.620972 | 5_4:+59940656 | Msa0860860:CDS |
| TTTCATCCACACTTAAGACC+AGG | 0.622642 | 5_4:-59946005 | None:intergenic |
| AGCTTGCCTGGTCTTAAGTG+TGG | 0.623799 | 5_4:+59945999 | Msa0860860:CDS |
| ATTTATATAGGCGATTGAGA+AGG | 0.626592 | 5_4:+59940553 | Msa0860860:intron |
| GAAGGTACAGACACATCGCA+AGG | 0.628380 | 5_4:+59939123 | Msa0860860:intron |
| ATCTACGCATTCCTCGTCCA+CGG | 0.629446 | 5_4:-59947349 | None:intergenic |
| ATGGGAGGCAGAGGTCGCGG+AGG | 0.629988 | 5_4:+59947314 | Msa0860860:CDS |
| GCTGCTGCAAGTGCCATGGG+AGG | 0.631802 | 5_4:+59947299 | Msa0860860:CDS |
| AGAGTTGCTGCTGCAACTGG+GGG | 0.633739 | 5_4:+59943268 | Msa0860860:CDS |
| GATTAGAAATGTGTTCTGAT+GGG | 0.635259 | 5_4:+59947372 | Msa0860860:exon |
| ATAGAAGACATGGTTGAAGA+CGG | 0.635825 | 5_4:-59938972 | None:intergenic |
| GACATGGTTGAAGACGGTGA+TGG | 0.638234 | 5_4:-59938966 | None:intergenic |
| CCACATGTAACAGACCTGAT+CGG | 0.638379 | 5_4:-59943533 | None:intergenic |
| TGCTAAGTCTCAAGACTCTG+AGG | 0.641653 | 5_4:+59939338 | Msa0860860:CDS |
| TACCAGAAACATACATCCAG+TGG | 0.644183 | 5_4:-59947437 | None:intergenic |
| TTATGTAGTAATCTATGGGA+AGG | 0.650704 | 5_4:+59947725 | Msa0860860:three_prime_UTR |
| GAGTCACGCATGTTACCACC+AGG | 0.652404 | 5_4:-59942642 | None:intergenic |
| GCTTACCAGCATAGAAGACA+TGG | 0.652653 | 5_4:-59938982 | None:intergenic |
| TGAATCAGCAATTCCACCAG+TGG | 0.658303 | 5_4:-59945827 | None:intergenic |
| GCCACCATAGTTCTTCGTGG+TGG | 0.660027 | 5_4:+59943508 | Msa0860860:CDS |
| GGGGTCGACATAGCCACTGG+TGG | 0.660282 | 5_4:+59945814 | Msa0860860:CDS |
| TCTGTCACCATTTCTAACGA+CGG | 0.662631 | 5_4:+59939255 | Msa0860860:CDS |
| AAGGTACAGACACATCGCAA+GGG | 0.678150 | 5_4:+59939124 | Msa0860860:intron |
| GCATTGTCACATAATTGCCG+GGG | 0.690605 | 5_4:-59944716 | None:intergenic |
| TCCACCACGAAGAACTATGG+TGG | 0.692737 | 5_4:-59943509 | None:intergenic |
| TTTCTTCTACAGGTTCCTGG+TGG | 0.695286 | 5_4:+59942627 | Msa0860860:intron |
| TGACAGAACCTTTATCATCG+TGG | 0.697727 | 5_4:-59939239 | None:intergenic |
| CATACCGCGAGGACCTAGGG+TGG | 0.704746 | 5_4:-59939205 | None:intergenic |
| TAGGGTGGTTCGAACGACGT+CGG | 0.704807 | 5_4:-59939190 | None:intergenic |
| CGAACCACCCTAGGTCCTCG+CGG | 0.746042 | 5_4:+59939201 | Msa0860860:CDS |
| ATGAGTTTGTCCATACCGCG+AGG | 0.761718 | 5_4:-59939216 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAATTAAACATATTTAAT+AGG | + | chr5_4:59943578-59943597 | Msa0860860:intron | 10.0% |
| !!! | AAATGAAAAAAAGTATATAT+TGG | - | chr5_4:59944602-59944621 | None:intergenic | 10.0% |
| !!! | TATTTGTTAATTTTATATGT+TGG | + | chr5_4:59947593-59947612 | Msa0860860:three_prime_UTR | 10.0% |
| !! | AAAAAAATAAGAAATGAGTT+AGG | - | chr5_4:59939055-59939074 | None:intergenic | 15.0% |
| !!! | TCTTATTTTTTTTGAAAATG+CGG | + | chr5_4:59939063-59939082 | Msa0860860:intron | 15.0% |
| !! | CCTATATAAATTATTATACA+CGG | - | chr5_4:59940544-59940563 | None:intergenic | 15.0% |
| !! | TCAATTGAAAAGAAATTATT+AGG | + | chr5_4:59940847-59940866 | Msa0860860:intron | 15.0% |
| !!! | ATTACATAGAATTTTATATC+TGG | + | chr5_4:59941160-59941179 | Msa0860860:intron | 15.0% |
| !!! | ATTTTTTTTTACATATTTGC+AGG | - | chr5_4:59941805-59941824 | None:intergenic | 15.0% |
| !! | AAAAATCTTTCTTTATTCTT+AGG | - | chr5_4:59941959-59941978 | None:intergenic | 15.0% |
| !!! | ACATTAAGTAATAGTATTTT+TGG | - | chr5_4:59942747-59942766 | None:intergenic | 15.0% |
| !! | GAATATTATTTATGACAAAT+TGG | + | chr5_4:59942962-59942981 | Msa0860860:intron | 15.0% |
| !! | AAACTACTTATTAATATATG+TGG | - | chr5_4:59943166-59943185 | None:intergenic | 15.0% |
| !! | GACTAAAATATTAGAATATT+AGG | - | chr5_4:59943977-59943996 | None:intergenic | 15.0% |
| !! | AGTCATATATCTTTAAATTA+AGG | + | chr5_4:59943993-59944012 | Msa0860860:intron | 15.0% |
| !! | GTCATATATCTTTAAATTAA+GGG | + | chr5_4:59943994-59944013 | Msa0860860:intron | 15.0% |
| !! | GACTAAAATAATAGAATATT+AGG | - | chr5_4:59944093-59944112 | None:intergenic | 15.0% |
| !! | AGTCATATATCTTTAAATTA+AGG | + | chr5_4:59943993-59944012 | Msa0860860:intron | 15.0% |
| !! | GTCATATATCTTTAAATTAA+GGG | + | chr5_4:59943994-59944013 | Msa0860860:intron | 15.0% |
| !!! | CATTATATGCAATTAATTTT+GGG | - | chr5_4:59944502-59944521 | None:intergenic | 15.0% |
| !! | ACTTATTAAAACAAATTATG+TGG | - | chr5_4:59945081-59945100 | None:intergenic | 15.0% |
| !!! | ATAAATTTTTCTATGATGAT+GGG | - | chr5_4:59945409-59945428 | None:intergenic | 15.0% |
| !! | TACATTATTGTATAACAATA+TGG | - | chr5_4:59945525-59945544 | None:intergenic | 15.0% |
| !!! | ATCAAATACTTATTTGTTTT+GGG | + | chr5_4:59946409-59946428 | Msa0860860:intron | 15.0% |
| !!! | GAACTTTTTTATTTTATAGA+AGG | - | chr5_4:59946569-59946588 | None:intergenic | 15.0% |
| !!! | ATAATCAAATAAAGTTTTGA+TGG | - | chr5_4:59946845-59946864 | None:intergenic | 15.0% |
| !! | TATGTAATGTACATAAAAAA+TGG | - | chr5_4:59947055-59947074 | None:intergenic | 15.0% |
| !! | AAAACTATTTACATTTATGT+GGG | - | chr5_4:59947146-59947165 | None:intergenic | 15.0% |
| !! | AAAAACTATTTACATTTATG+TGG | - | chr5_4:59947147-59947166 | None:intergenic | 15.0% |
| !! | ACAACTTAAATAAGAACTTA+TGG | + | chr5_4:59939571-59939590 | Msa0860860:intron | 20.0% |
| !! | TACATAAACACTAATATGAT+AGG | - | chr5_4:59939604-59939623 | None:intergenic | 20.0% |
| !! | TTCACTCTCAAAATTTAATA+CGG | + | chr5_4:59940411-59940430 | Msa0860860:intron | 20.0% |
| !! | AAAATTTAATACGGAGTTAT+AGG | + | chr5_4:59940420-59940439 | Msa0860860:intron | 20.0% |
| !! | CCGTGTATAATAATTTATAT+AGG | + | chr5_4:59940541-59940560 | Msa0860860:intron | 20.0% |
| !! | AATAGTAAAACATACCATAA+TGG | + | chr5_4:59940908-59940927 | Msa0860860:intron | 20.0% |
| !! | GATTGTTCATAAAATGTAAT+AGG | + | chr5_4:59941829-59941848 | Msa0860860:intron | 20.0% |
| !!! | TCGTATATGTTTTTGTTTTA+TGG | + | chr5_4:59942525-59942544 | Msa0860860:intron | 20.0% |
| !!! | AACAAACGAATTTGAAATAT+TGG | - | chr5_4:59942815-59942834 | None:intergenic | 20.0% |
| !! | GACTGTTAAATATTAAAATG+TGG | + | chr5_4:59943796-59943815 | Msa0860860:intron | 20.0% |
| !! | AATATTAAAATGTGGTTATG+TGG | + | chr5_4:59943804-59943823 | Msa0860860:intron | 20.0% |
| !!! | AAGTTTTTGTAAACTAGATA+TGG | + | chr5_4:59943932-59943951 | Msa0860860:intron | 20.0% |
| !!! | AAGTTTTTGTAAACTAGATA+TGG | + | chr5_4:59943932-59943951 | Msa0860860:intron | 20.0% |
| !!! | AATCATTCTAGAAAATTTTC+AGG | + | chr5_4:59944231-59944250 | Msa0860860:intron | 20.0% |
| !! | GAAAATTTCATACACAAAAA+GGG | - | chr5_4:59944465-59944484 | None:intergenic | 20.0% |
| !! | AGAAAATTTCATACACAAAA+AGG | - | chr5_4:59944466-59944485 | None:intergenic | 20.0% |
| !!! | GCATTATATGCAATTAATTT+TGG | - | chr5_4:59944503-59944522 | None:intergenic | 20.0% |
| !!! | ATTTTTGAAATCACTATTTC+AGG | + | chr5_4:59944618-59944637 | Msa0860860:intron | 20.0% |
| !!! | TAAATTTTTCTATGATGATG+GGG | - | chr5_4:59945408-59945427 | None:intergenic | 20.0% |
| !!! | GATAAATTTTTCTATGATGA+TGG | - | chr5_4:59945410-59945429 | None:intergenic | 20.0% |
| !! | ATCATAGAAAAATTTATCGA+AGG | + | chr5_4:59945412-59945431 | Msa0860860:intron | 20.0% |
| !! | TCATAGAAAAATTTATCGAA+GGG | + | chr5_4:59945413-59945432 | Msa0860860:intron | 20.0% |
| !! | TGTTATACAATAATGTATTC+AGG | + | chr5_4:59945528-59945547 | Msa0860860:intron | 20.0% |
| !! | TAAATATAAACTGATAGAGA+TGG | - | chr5_4:59946060-59946079 | None:intergenic | 20.0% |
| !!! | AAAGGATTTTTTCTACTTTA+AGG | + | chr5_4:59946168-59946187 | Msa0860860:intron | 20.0% |
| !!! | AAGGATTTTTTCTACTTTAA+GGG | + | chr5_4:59946169-59946188 | Msa0860860:intron | 20.0% |
| !!! | TAGTATATAACTTTTACCTT+TGG | + | chr5_4:59946197-59946216 | Msa0860860:intron | 20.0% |
| !! | CAAAACAAATAAGTATTTGA+TGG | - | chr5_4:59946410-59946429 | None:intergenic | 20.0% |
| !!! | CATCAAATACTTATTTGTTT+TGG | + | chr5_4:59946408-59946427 | Msa0860860:intron | 20.0% |
| !!! | TCAAATACTTATTTGTTTTG+GGG | + | chr5_4:59946410-59946429 | Msa0860860:intron | 20.0% |
| !! | TTTCTCATTAAAATCATTGA+AGG | - | chr5_4:59946811-59946830 | None:intergenic | 20.0% |
| !! | ATTAATTGTTGCATAATCAT+GGG | + | chr5_4:59946910-59946929 | Msa0860860:intron | 20.0% |
| !! | AAATAACATAATCGTAGAAT+AGG | - | chr5_4:59947183-59947202 | None:intergenic | 20.0% |
| !!! | TTGTTAATTTTATATGTTGG+AGG | + | chr5_4:59947596-59947615 | Msa0860860:three_prime_UTR | 20.0% |
| !!! | TGTTAATTTTATATGTTGGA+GGG | + | chr5_4:59947597-59947616 | Msa0860860:three_prime_UTR | 20.0% |
| !! | TATCTAAATACTTAGTGTTA+AGG | - | chr5_4:59947682-59947701 | None:intergenic | 20.0% |
| !!! | TTTTTTTGAAAATGCGGTTA+TGG | + | chr5_4:59939069-59939088 | Msa0860860:intron | 25.0% |
| ! | TTGTATTTGTTTCATTCAGA+TGG | + | chr5_4:59939511-59939530 | Msa0860860:intron | 25.0% |
| !! | ATTCAGATGGTTAAGATTTT+TGG | + | chr5_4:59939524-59939543 | Msa0860860:intron | 25.0% |
| !!! | GGTTAAGATTTTTGGAATTA+AGG | + | chr5_4:59939532-59939551 | Msa0860860:intron | 25.0% |
| !!! | AACACAAACTTTTTTGTGTA+AGG | + | chr5_4:59939655-59939674 | Msa0860860:intron | 25.0% |
| ! | TTATTTCCATAAGTTCTCTA+GGG | - | chr5_4:59939703-59939722 | None:intergenic | 25.0% |
| ! | CATTCTATAGCAAAAGATTA+AGG | + | chr5_4:59939809-59939828 | Msa0860860:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr5_4:59939835-59939854 | None:intergenic | 25.0% |
| !! | TCTAAAAGTTCAAGTTTACT+TGG | - | chr5_4:59940100-59940119 | None:intergenic | 25.0% |
| ! | TTATTTGCATAAGTTCTCTA+GGG | - | chr5_4:59940143-59940162 | None:intergenic | 25.0% |
| ! | ACACTTTCTTCAAAACTTAT+AGG | + | chr5_4:59940653-59940672 | Msa0860860:CDS | 25.0% |
| ! | AAACATGATTGGAATAAAGA+AGG | + | chr5_4:59940745-59940764 | Msa0860860:CDS | 25.0% |
| ! | AAAAGAGATAATGTACCAAA+TGG | - | chr5_4:59940803-59940822 | None:intergenic | 25.0% |
| !! | TTGGTACATTATCTCTTTTA+TGG | + | chr5_4:59940804-59940823 | Msa0860860:intron | 25.0% |
| !! | GAACTAATGTGTTTTATGAT+TGG | + | chr5_4:59941069-59941088 | Msa0860860:intron | 25.0% |
| !!! | ATAGAATTTTGAGTGTACTT+TGG | + | chr5_4:59941098-59941117 | Msa0860860:intron | 25.0% |
| ! | TGTTATGTTATCTAAACACT+TGG | + | chr5_4:59941206-59941225 | Msa0860860:intron | 25.0% |
| ! | TGGTGAAAAAAAACATTTGA+TGG | + | chr5_4:59941226-59941245 | Msa0860860:intron | 25.0% |
| !!! | CATTTGAAGATTTTTAAAGC+CGG | + | chr5_4:59941341-59941360 | Msa0860860:intron | 25.0% |
| ! | TTATTAGAATGGTGGTTATA+TGG | - | chr5_4:59941384-59941403 | None:intergenic | 25.0% |
| ! | TGCAAAAATAGTAACTGTTT+GGG | - | chr5_4:59941501-59941520 | None:intergenic | 25.0% |
| ! | TGATTACAATGTTAGGAAAT+GGG | - | chr5_4:59941559-59941578 | None:intergenic | 25.0% |
| ! | TTGATTACAATGTTAGGAAA+TGG | - | chr5_4:59941560-59941579 | None:intergenic | 25.0% |
| ! | TGAAACTTGATTACAATGTT+AGG | - | chr5_4:59941566-59941585 | None:intergenic | 25.0% |
| !! | GATACATTTCAATTGATAGT+AGG | + | chr5_4:59941749-59941768 | Msa0860860:intron | 25.0% |
| ! | CATAAAATGTAATAGGAAGT+TGG | + | chr5_4:59941836-59941855 | Msa0860860:intron | 25.0% |
| ! | AATTAGATAACTGTAAGCTA+CGG | + | chr5_4:59942069-59942088 | Msa0860860:intron | 25.0% |
| ! | AATTAACAAGTAAAATGGCA+AGG | - | chr5_4:59942207-59942226 | None:intergenic | 25.0% |
| ! | AGTGGAATTAACAAGTAAAA+TGG | - | chr5_4:59942212-59942231 | None:intergenic | 25.0% |
| ! | ACATAATTCAGTGTTATCAT+AGG | + | chr5_4:59942381-59942400 | Msa0860860:intron | 25.0% |
| !!! | TTTAGGTACTTTTTTTTGTG+TGG | + | chr5_4:59942580-59942599 | Msa0860860:intron | 25.0% |
| ! | ATATGAAAATGTCTTCTTGA+AGG | - | chr5_4:59942688-59942707 | None:intergenic | 25.0% |
| ! | ACTATTACTTAATGTTGAGT+TGG | + | chr5_4:59942752-59942771 | Msa0860860:CDS | 25.0% |
| !! | TATTTTTCCTCATTAGATCA+AGG | + | chr5_4:59943074-59943093 | Msa0860860:intron | 25.0% |
| ! | TGTCAATAACATTATTGATG+AGG | + | chr5_4:59943306-59943325 | Msa0860860:CDS | 25.0% |
| !!! | TTTTTACCTTATTTGCTTGA+AGG | + | chr5_4:59943399-59943418 | Msa0860860:intron | 25.0% |
| !!! | TATTTTTTCACAGTTCATAG+AGG | + | chr5_4:59943634-59943653 | Msa0860860:intron | 25.0% |
| !!! | AATTTTGTTGTGCATTTCAT+TGG | + | chr5_4:59943762-59943781 | Msa0860860:intron | 25.0% |
| ! | CATTTCATTGGATTATGATA+GGG | + | chr5_4:59943774-59943793 | Msa0860860:intron | 25.0% |
| !!! | AAAATTTTCAGGTTTCCAAT+AGG | + | chr5_4:59944242-59944261 | Msa0860860:intron | 25.0% |
| !!! | TCCAATAGGTTTTTTAATCT+TGG | + | chr5_4:59944256-59944275 | Msa0860860:intron | 25.0% |
| ! | ACCAAGATTAAAAAACCTAT+TGG | - | chr5_4:59944260-59944279 | None:intergenic | 25.0% |
| !! | CAAATTTAATGTGTTATTGC+AGG | + | chr5_4:59944688-59944707 | Msa0860860:intron | 25.0% |
| ! | CAATGATCTTATATTGAACT+AGG | - | chr5_4:59944895-59944914 | None:intergenic | 25.0% |
| ! | TGGAGGTTATAATATGTTAA+AGG | + | chr5_4:59944944-59944963 | Msa0860860:intron | 25.0% |
| ! | TTAAAACAATTTGCATGAAC+AGG | + | chr5_4:59945275-59945294 | Msa0860860:intron | 25.0% |
| !! | AGTTAATACATTCTGAAAGT+GGG | - | chr5_4:59945311-59945330 | None:intergenic | 25.0% |
| !! | TAGTTAATACATTCTGAAAG+TGG | - | chr5_4:59945312-59945331 | None:intergenic | 25.0% |
| ! | TCAAGAGGAAATAAATAAAG+TGG | - | chr5_4:59945374-59945393 | None:intergenic | 25.0% |
| ! | TCCAATTCTAATGTTCTATA+TGG | + | chr5_4:59945916-59945935 | Msa0860860:intron | 25.0% |
| ! | TCCATATAGAACATTAGAAT+TGG | - | chr5_4:59945920-59945939 | None:intergenic | 25.0% |
| ! | ATTCTAATGTTCTATATGGA+TGG | + | chr5_4:59945920-59945939 | Msa0860860:intron | 25.0% |
| ! | TGAAACAGTTAAAAATCCTA+AGG | + | chr5_4:59946023-59946042 | Msa0860860:CDS | 25.0% |
| !!! | TGTTTTGGTTAATATTTCCT+AGG | + | chr5_4:59946096-59946115 | Msa0860860:intron | 25.0% |
| !!! | GTTTTGGTTAATATTTCCTA+GGG | + | chr5_4:59946097-59946116 | Msa0860860:intron | 25.0% |
| !! | TGACACATTTCTTTTTGTAA+AGG | + | chr5_4:59946150-59946169 | Msa0860860:intron | 25.0% |
| !!! | AGGATTTTTTCTACTTTAAG+GGG | + | chr5_4:59946170-59946189 | Msa0860860:intron | 25.0% |
| ! | CGAGTAAAAGAAATTTGTAT+GGG | - | chr5_4:59946363-59946382 | None:intergenic | 25.0% |
| !! | CCATACAAATTTCTTTTACT+CGG | + | chr5_4:59946361-59946380 | Msa0860860:intron | 25.0% |
| !! | GAAAAATATCATTCTGGAAA+TGG | - | chr5_4:59946524-59946543 | None:intergenic | 25.0% |
| ! | AGAAGGAATAAGATCAAATT+GGG | - | chr5_4:59946552-59946571 | None:intergenic | 25.0% |
| ! | TAGAAGGAATAAGATCAAAT+TGG | - | chr5_4:59946553-59946572 | None:intergenic | 25.0% |
| ! | AATTCACTTATCTTGACTAA+GGG | - | chr5_4:59946591-59946610 | None:intergenic | 25.0% |
| ! | TAATTCACTTATCTTGACTA+AGG | - | chr5_4:59946592-59946611 | None:intergenic | 25.0% |
| ! | TGCTAATATCAAAGCAAATT+GGG | - | chr5_4:59946729-59946748 | None:intergenic | 25.0% |
| ! | TGATTATGCAACAATTAATC+AGG | - | chr5_4:59946909-59946928 | None:intergenic | 25.0% |
| ! | GATTAATTGTTGCATAATCA+TGG | + | chr5_4:59946909-59946928 | Msa0860860:intron | 25.0% |
| !!! | TACATTGATTTACAGAATTG+TGG | + | chr5_4:59947006-59947025 | Msa0860860:intron | 25.0% |
| ! | TTTATCTACAGATGTTGATA+TGG | + | chr5_4:59947482-59947501 | Msa0860860:three_prime_UTR | 25.0% |
| ! | ATGGTATGAAATGGTAATAT+TGG | + | chr5_4:59947501-59947520 | Msa0860860:three_prime_UTR | 25.0% |
| ! | TGGTATGAAATGGTAATATT+GGG | + | chr5_4:59947502-59947521 | Msa0860860:three_prime_UTR | 25.0% |
| !! | GTTAATTTTATATGTTGGAG+GGG | + | chr5_4:59947598-59947617 | Msa0860860:three_prime_UTR | 25.0% |
| ! | ATTGTTTTCACTGGACAAAA+TGG | - | chr5_4:59938849-59938868 | None:intergenic | 30.0% |
| AGCAATATCAACTAAGATCT+TGG | - | chr5_4:59939322-59939341 | None:intergenic | 30.0% | |
| TTTCTGCAAAATGATGAGAT+CGG | - | chr5_4:59939394-59939413 | None:intergenic | 30.0% | |
| ATATTACTCTCTGCTTAGAT+CGG | + | chr5_4:59939456-59939475 | Msa0860860:intron | 30.0% | |
| CTTATTTCCATAAGTTCTCT+AGG | - | chr5_4:59939704-59939723 | None:intergenic | 30.0% | |
| TTATTTGTAGCTTATAGCAC+AGG | + | chr5_4:59939850-59939869 | Msa0860860:intron | 30.0% | |
| ! | TACGTTTTGTGACATTGTTT+TGG | - | chr5_4:59940038-59940057 | None:intergenic | 30.0% |
| AAAACAATGTCACAAAACGT+AGG | + | chr5_4:59940037-59940056 | Msa0860860:intron | 30.0% | |
| CTTATTTGCATAAGTTCTCT+AGG | - | chr5_4:59940144-59940163 | None:intergenic | 30.0% | |
| GCTAAAATGAGCTTATCTAT+TGG | - | chr5_4:59940237-59940256 | None:intergenic | 30.0% | |
| CACTTAGAGCTTAATTGAAT+TGG | - | chr5_4:59940259-59940278 | None:intergenic | 30.0% | |
| TGAGATATAAGTATGTACCA+AGG | - | chr5_4:59940456-59940475 | None:intergenic | 30.0% | |
| ATTTATATAGGCGATTGAGA+AGG | + | chr5_4:59940553-59940572 | Msa0860860:intron | 30.0% | |
| CTTTCTTCAAAACTTATAGG+CGG | + | chr5_4:59940656-59940675 | Msa0860860:CDS | 30.0% | |
| AAAGGAATTCTTTGCATCTA+TGG | + | chr5_4:59940682-59940701 | Msa0860860:CDS | 30.0% | |
| GATGATAGGTTAAACATGAT+TGG | + | chr5_4:59940734-59940753 | Msa0860860:CDS | 30.0% | |
| ! | TTTACAACCTTTTCTCCATT+TGG | + | chr5_4:59940785-59940804 | Msa0860860:intron | 30.0% |
| TAATGTACCAAATGGAGAAA+AGG | - | chr5_4:59940795-59940814 | None:intergenic | 30.0% | |
| ! | GTACATTATCTCTTTTATGG+TGG | + | chr5_4:59940807-59940826 | Msa0860860:intron | 30.0% |
| ACACATTTATGCAAAGTGAT+TGG | - | chr5_4:59940956-59940975 | None:intergenic | 30.0% | |
| TTCGTTAAAATGATATCCAC+TGG | - | chr5_4:59941312-59941331 | None:intergenic | 30.0% | |
| ACTGTTTGGGAAATTAATTG+AGG | - | chr5_4:59941488-59941507 | None:intergenic | 30.0% | |
| CTGCAAAAATAGTAACTGTT+TGG | - | chr5_4:59941502-59941521 | None:intergenic | 30.0% | |
| AAACTAGGTAACCTTTATTG+AGG | - | chr5_4:59941670-59941689 | None:intergenic | 30.0% | |
| TCTCAAATTATTATCCGTGT+CGG | - | chr5_4:59942356-59942375 | None:intergenic | 30.0% | |
| TTTGAACTGTATCACTAACT+AGG | + | chr5_4:59942481-59942500 | Msa0860860:intron | 30.0% | |
| AGTACCTAAAGAGAACTAAA+TGG | - | chr5_4:59942570-59942589 | None:intergenic | 30.0% | |
| ! | TGATTCAGATTTTCTTCTAC+AGG | + | chr5_4:59942617-59942636 | Msa0860860:intron | 30.0% |
| ! | AAGAAGACATTTTCATATGC+TGG | + | chr5_4:59942690-59942709 | Msa0860860:CDS | 30.0% |
| AGAAAGAAAATGCCGAAATA+AGG | + | chr5_4:59942787-59942806 | Msa0860860:CDS | 30.0% | |
| ! | GAAATATTGGCACCTTATTT+CGG | - | chr5_4:59942802-59942821 | None:intergenic | 30.0% |
| !!! | TTTTGTGTTCGTTGATTTTG+AGG | + | chr5_4:59942833-59942852 | Msa0860860:intron | 30.0% |
| AATCAATTGTTGATGCAGAA+TGG | + | chr5_4:59942940-59942959 | Msa0860860:intron | 30.0% | |
| AACTAAACCTTGATCTAATG+AGG | - | chr5_4:59943084-59943103 | None:intergenic | 30.0% | |
| ATGAGGTTGTGTATTATTAG+TGG | + | chr5_4:59943323-59943342 | Msa0860860:intron | 30.0% | |
| TGAGGTTGTGTATTATTAGT+GGG | + | chr5_4:59943324-59943343 | Msa0860860:intron | 30.0% | |
| !! | ATTTTTGAGGAAAAGCAAGT+AGG | + | chr5_4:59943439-59943458 | Msa0860860:CDS | 30.0% |
| TTTAATAGGATCTGCCATTA+TGG | + | chr5_4:59943592-59943611 | Msa0860860:intron | 30.0% | |
| TTAATAGGATCTGCCATTAT+GGG | + | chr5_4:59943593-59943612 | Msa0860860:intron | 30.0% | |
| ACTTAAATATGTGCCCATAA+TGG | - | chr5_4:59943609-59943628 | None:intergenic | 30.0% | |
| ATGCAATCATGATTGTTAGA+AGG | + | chr5_4:59943678-59943697 | Msa0860860:CDS | 30.0% | |
| TGCAATCATGATTGTTAGAA+GGG | + | chr5_4:59943679-59943698 | Msa0860860:CDS | 30.0% | |
| GCATTTCATTGGATTATGAT+AGG | + | chr5_4:59943773-59943792 | Msa0860860:intron | 30.0% | |
| AAACTAGATATGGTCTATAG+TGG | + | chr5_4:59943942-59943961 | Msa0860860:intron | 30.0% | |
| AAACTAGATATGGTCTATAG+TGG | + | chr5_4:59943942-59943961 | Msa0860860:intron | 30.0% | |
| !! | ATATTTTGGATAGCAGACAA+CGG | - | chr5_4:59944340-59944359 | None:intergenic | 30.0% |
| CACTATTTGACAAGATTGAT+GGG | - | chr5_4:59944364-59944383 | None:intergenic | 30.0% | |
| TCACTATTTGACAAGATTGA+TGG | - | chr5_4:59944365-59944384 | None:intergenic | 30.0% | |
| TCTTGTCAAATAGTGACTAT+AGG | + | chr5_4:59944369-59944388 | Msa0860860:intron | 30.0% | |
| CTTGTCAAATAGTGACTATA+GGG | + | chr5_4:59944370-59944389 | Msa0860860:intron | 30.0% | |
| AGAGAATGTTCAAAATCACA+AGG | - | chr5_4:59944525-59944544 | None:intergenic | 30.0% | |
| TTACTACATATACCTGCATT+TGG | + | chr5_4:59944835-59944854 | Msa0860860:intron | 30.0% | |
| ATCTTATATTGAACTAGGCT+TGG | - | chr5_4:59944890-59944909 | None:intergenic | 30.0% | |
| AATTGAATACAAGTTCAAGC+TGG | + | chr5_4:59944924-59944943 | Msa0860860:intron | 30.0% | |
| GTTATAATATGTTAAAGGCC+TGG | + | chr5_4:59944949-59944968 | Msa0860860:intron | 30.0% | |
| AAATGAAGTAACTCACGAAT+AGG | + | chr5_4:59945109-59945128 | Msa0860860:intron | 30.0% | |
| ATGCTTAGAAATTAGATTCG+TGG | + | chr5_4:59945206-59945225 | Msa0860860:intron | 30.0% | |
| AGAAATTAGATTCGTGGATT+TGG | + | chr5_4:59945212-59945231 | Msa0860860:intron | 30.0% | |
| TCCAATCAACATATACTTGA+TGG | - | chr5_4:59945347-59945366 | None:intergenic | 30.0% | |
| GGGTTTGAATGAACTAAAAA+TGG | - | chr5_4:59945487-59945506 | None:intergenic | 30.0% | |
| AATGCATTTACAGATATGTC+AGG | - | chr5_4:59945698-59945717 | None:intergenic | 30.0% | |
| ! | CAAAACAAAAGTGCAATCAT+CGG | - | chr5_4:59946083-59946102 | None:intergenic | 30.0% |
| TTGAAATTTCAACATACCCT+AGG | - | chr5_4:59946116-59946135 | None:intergenic | 30.0% | |
| CAAAAAGAAATGTGTCAAAC+AGG | - | chr5_4:59946147-59946166 | None:intergenic | 30.0% | |
| !!! | GGATTTTTTCTACTTTAAGG+GGG | + | chr5_4:59946171-59946190 | Msa0860860:intron | 30.0% |
| CAAGGAAAGTTAAGAACAAT+TGG | - | chr5_4:59946273-59946292 | None:intergenic | 30.0% | |
| ACAATGCTTAAAAGACAACA+AGG | - | chr5_4:59946291-59946310 | None:intergenic | 30.0% | |
| CCGAGTAAAAGAAATTTGTA+TGG | - | chr5_4:59946364-59946383 | None:intergenic | 30.0% | |
| !!! | ACTTATTTGTTTTGGGGTAA+TGG | + | chr5_4:59946416-59946435 | Msa0860860:intron | 30.0% |
| GACGATGAAAAATATCATTC+TGG | - | chr5_4:59946530-59946549 | None:intergenic | 30.0% | |
| AATGATTAAGCGAGGAAAAA+GGG | - | chr5_4:59946642-59946661 | None:intergenic | 30.0% | |
| AGTATCAGATACACAATTCT+TGG | - | chr5_4:59946705-59946724 | None:intergenic | 30.0% | |
| GTGCTAATATCAAAGCAAAT+TGG | - | chr5_4:59946730-59946749 | None:intergenic | 30.0% | |
| CATCATTTGTACAATGTACA+TGG | - | chr5_4:59946871-59946890 | None:intergenic | 30.0% | |
| ATTCTTGCGATGATTTAAGT+TGG | + | chr5_4:59946958-59946977 | Msa0860860:intron | 30.0% | |
| ! | TTCTTGCGATGATTTAAGTT+GGG | + | chr5_4:59946959-59946978 | Msa0860860:intron | 30.0% |
| AAGTTCAAAAGTCACATTGA+GGG | - | chr5_4:59946986-59947005 | None:intergenic | 30.0% | |
| AAAGTTCAAAAGTCACATTG+AGG | - | chr5_4:59946987-59947006 | None:intergenic | 30.0% | |
| !! | TTCTCTAAGCTTGTTAGTTA+TGG | + | chr5_4:59947091-59947110 | Msa0860860:intron | 30.0% |
| TTTCACTAATACGAAGAAGT+AGG | + | chr5_4:59947201-59947220 | Msa0860860:intron | 30.0% | |
| GAAGTAGGAAACAACATTTA+TGG | + | chr5_4:59947216-59947235 | Msa0860860:intron | 30.0% | |
| TGATTAGAAATGTGTTCTGA+TGG | + | chr5_4:59947371-59947390 | Msa0860860:exon | 30.0% | |
| GATTAGAAATGTGTTCTGAT+GGG | + | chr5_4:59947372-59947391 | Msa0860860:exon | 30.0% | |
| GATGTTGATATGGTATGAAA+TGG | + | chr5_4:59947492-59947511 | Msa0860860:three_prime_UTR | 30.0% | |
| GGTATGAAATGGTAATATTG+GGG | + | chr5_4:59947503-59947522 | Msa0860860:three_prime_UTR | 30.0% | |
| ATTTATTAGATGGCTGTTGT+TGG | + | chr5_4:59947625-59947644 | Msa0860860:three_prime_UTR | 30.0% | |
| TTTATTAGATGGCTGTTGTT+GGG | + | chr5_4:59947626-59947645 | Msa0860860:three_prime_UTR | 30.0% | |
| !! | TAGCCTTATGTAGTAATCTA+TGG | + | chr5_4:59947720-59947739 | Msa0860860:three_prime_UTR | 30.0% |
| ! | AGCCTTATGTAGTAATCTAT+GGG | + | chr5_4:59947721-59947740 | Msa0860860:three_prime_UTR | 30.0% |
| TTCCCATAGATTACTACATA+AGG | - | chr5_4:59947726-59947745 | None:intergenic | 30.0% | |
| TTATGTAGTAATCTATGGGA+AGG | + | chr5_4:59947725-59947744 | Msa0860860:three_prime_UTR | 30.0% | |
| ! | TCTCTGTCTATTTTCAAACC+AGG | - | chr5_4:59938824-59938843 | None:intergenic | 35.0% |
| ! | GAATGAGTGATTGTTTTCAC+TGG | - | chr5_4:59938858-59938877 | None:intergenic | 35.0% |
| TCTCAACACTGCAAAAAAGA+AGG | + | chr5_4:59938876-59938895 | Msa0860860:CDS | 35.0% | |
| !!! | TTTTTTCGAGTACCAGTTTC+TGG | - | chr5_4:59938904-59938923 | None:intergenic | 35.0% |
| AGGAAGAGAGAGAGTTATTA+GGG | - | chr5_4:59938943-59938962 | None:intergenic | 35.0% | |
| ATAGAAGACATGGTTGAAGA+CGG | - | chr5_4:59938975-59938994 | None:intergenic | 35.0% | |
| TCTTTCAGTAGTATGATCTG+TGG | - | chr5_4:59939105-59939124 | None:intergenic | 35.0% | |
| CAGATCATACTACTGAAAGA+AGG | + | chr5_4:59939105-59939124 | Msa0860860:intron | 35.0% | |
| AAACTCATCCACGATGATAA+AGG | + | chr5_4:59939231-59939250 | Msa0860860:CDS | 35.0% | |
| ! | TGGAATTAAGGACGTGTTTT+TGG | + | chr5_4:59939544-59939563 | Msa0860860:intron | 35.0% |
| AAACTACCCTAGAGAACTTA+TGG | + | chr5_4:59939694-59939713 | Msa0860860:intron | 35.0% | |
| GAGAACTTATGGAAATAAGC+TGG | + | chr5_4:59939705-59939724 | Msa0860860:intron | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr5_4:59940073-59940092 | Msa0860860:intron | 35.0% | |
| TGAACACCATCTTCAATGAA+AGG | - | chr5_4:59940395-59940414 | None:intergenic | 35.0% | |
| ! | TAGCATTGAGGGAAAAAGTT+TGG | + | chr5_4:59940592-59940611 | Msa0860860:CDS | 35.0% |
| ! | GAAGAGAAGAAAAGTTTGCT+TGG | + | chr5_4:59940614-59940633 | Msa0860860:CDS | 35.0% |
| AAAACTTATAGGCGGAGAAA+AGG | + | chr5_4:59940664-59940683 | Msa0860860:CDS | 35.0% | |
| ATTCTTTGCATCTATGGTTG+TGG | + | chr5_4:59940688-59940707 | Msa0860860:CDS | 35.0% | |
| TAGGAAAATGAGTGCAAAAG+AGG | + | chr5_4:59940866-59940885 | Msa0860860:intron | 35.0% | |
| AAAATGAGTGCAAAAGAGGA+AGG | + | chr5_4:59940870-59940889 | Msa0860860:intron | 35.0% | |
| ! | CTTTCTGATTTCTTTTCCTG+CGG | + | chr5_4:59941280-59941299 | Msa0860860:intron | 35.0% |
| GGTTTGACACTAAAATAGAC+CGG | - | chr5_4:59941363-59941382 | None:intergenic | 35.0% | |
| GTGGCAATTTATTAGAATGG+TGG | - | chr5_4:59941392-59941411 | None:intergenic | 35.0% | |
| CGAGTGGCAATTTATTAGAA+TGG | - | chr5_4:59941395-59941414 | None:intergenic | 35.0% | |
| TGTTGTCAACATCGAGAAAT+GGG | - | chr5_4:59941443-59941462 | None:intergenic | 35.0% | |
| ATGTTGTCAACATCGAGAAA+TGG | - | chr5_4:59941444-59941463 | None:intergenic | 35.0% | |
| ! | TTGAGGTGTTTCATAGTTCT+CGG | - | chr5_4:59941471-59941490 | None:intergenic | 35.0% |
| TTTGCAGTTCTCCAAATATG+TGG | + | chr5_4:59941515-59941534 | Msa0860860:intron | 35.0% | |
| AGTAACAGCAACCACATATT+TGG | - | chr5_4:59941529-59941548 | None:intergenic | 35.0% | |
| TAGGTAACCTTTATTGAGGA+GGG | - | chr5_4:59941666-59941685 | None:intergenic | 35.0% | |
| TGCAATGCAACATGAAAACT+AGG | - | chr5_4:59941685-59941704 | None:intergenic | 35.0% | |
| TTTACCCACAGATTCTTAAG+TGG | + | chr5_4:59941727-59941746 | Msa0860860:intron | 35.0% | |
| GTATCCACTTAAGAATCTGT+GGG | - | chr5_4:59941734-59941753 | None:intergenic | 35.0% | |
| TGTATCCACTTAAGAATCTG+TGG | - | chr5_4:59941735-59941754 | None:intergenic | 35.0% | |
| TGATGCACAAGATATTGTAC+AGG | + | chr5_4:59941879-59941898 | Msa0860860:intron | 35.0% | |
| GATGCACAAGATATTGTACA+GGG | + | chr5_4:59941880-59941899 | Msa0860860:intron | 35.0% | |
| TCACTACCCATGAATAAGTA+GGG | + | chr5_4:59942016-59942035 | Msa0860860:intron | 35.0% | |
| GCTTCATAGGTACAAACAAA+CGG | - | chr5_4:59942320-59942339 | None:intergenic | 35.0% | |
| TTGTTTGTACCTATGAAGCA+CGG | + | chr5_4:59942321-59942340 | Msa0860860:intron | 35.0% | |
| ACAGTTCAAAGTATGAAGCA+CGG | - | chr5_4:59942471-59942490 | None:intergenic | 35.0% | |
| AACTGTATCACTAACTAGGT+TGG | + | chr5_4:59942485-59942504 | Msa0860860:intron | 35.0% | |
| ! | ATCACTAACTAGGTTGGAAT+TGG | + | chr5_4:59942491-59942510 | Msa0860860:intron | 35.0% |
| ! | TCACTAACTAGGTTGGAATT+GGG | + | chr5_4:59942492-59942511 | Msa0860860:intron | 35.0% |
| !! | CAAGCCATTTAGTTCTCTTT+AGG | + | chr5_4:59942563-59942582 | Msa0860860:intron | 35.0% |
| TTTGGATCGAGAAACTTCTT+GGG | - | chr5_4:59942729-59942748 | None:intergenic | 35.0% | |
| ! | TTTTGGATCGAGAAACTTCT+TGG | - | chr5_4:59942730-59942749 | None:intergenic | 35.0% |
| TGAAGAGTTGCTTAGTTATG+TGG | + | chr5_4:59942862-59942881 | Msa0860860:intron | 35.0% | |
| AAGGATCTGATAATCTGTAG+AGG | - | chr5_4:59942911-59942930 | None:intergenic | 35.0% | |
| ACAATTGATTGATACTGCGA+AGG | - | chr5_4:59942930-59942949 | None:intergenic | 35.0% | |
| TTGGATAAATGTGTCCAAAG+TGG | + | chr5_4:59942981-59943000 | Msa0860860:intron | 35.0% | |
| TGTGGAAGTTTACAATTACG+TGG | - | chr5_4:59943148-59943167 | None:intergenic | 35.0% | |
| TCGGCAAAATACTGTTTCAA+AGG | - | chr5_4:59943202-59943221 | None:intergenic | 35.0% | |
| AGCACAGAAAATGTCTCTAT+CGG | - | chr5_4:59943221-59943240 | None:intergenic | 35.0% | |
| CAAGAACCTTCAAGCAAATA+AGG | - | chr5_4:59943408-59943427 | None:intergenic | 35.0% | |
| CTTATTTGCTTGAAGGTTCT+TGG | + | chr5_4:59943406-59943425 | Msa0860860:intron | 35.0% | |
| ! | TGGAACTTGTGAGATTTTTG+AGG | + | chr5_4:59943426-59943445 | Msa0860860:CDS | 35.0% |
| GAGAGATTCAACATCTTCAA+TGG | + | chr5_4:59943466-59943485 | Msa0860860:CDS | 35.0% | |
| AAGAATTCAACTGTAGTTGC+TGG | + | chr5_4:59943707-59943726 | Msa0860860:CDS | 35.0% | |
| ATGCACAACAAAATTCTGAG+TGG | - | chr5_4:59943757-59943776 | None:intergenic | 35.0% | |
| ATGTGGTTATTGTTGTCAGA+TGG | + | chr5_4:59943821-59943840 | Msa0860860:intron | 35.0% | |
| TTTAAATTAAGGGACTGCAG+TGG | + | chr5_4:59944004-59944023 | Msa0860860:intron | 35.0% | |
| TTTAAATTAAGGGACTGCAG+TGG | + | chr5_4:59944004-59944023 | Msa0860860:intron | 35.0% | |
| ! | GGTCTAAAGTTCAAACTAAC+AGG | + | chr5_4:59944158-59944177 | Msa0860860:intron | 35.0% |
| !! | CAAGATTGATGGGCATATTT+TGG | - | chr5_4:59944354-59944373 | None:intergenic | 35.0% |
| AAATCACTATTTCAGGCATC+TGG | + | chr5_4:59944625-59944644 | Msa0860860:intron | 35.0% | |
| CAATCGTGCAAATAAAACGA+AGG | - | chr5_4:59944810-59944829 | None:intergenic | 35.0% | |
| GCAGCTTAACTCAAGTAAAA+TGG | - | chr5_4:59945173-59945192 | None:intergenic | 35.0% | |
| GCCATCAAGTATATGTTGAT+TGG | + | chr5_4:59945343-59945362 | Msa0860860:intron | 35.0% | |
| !! | TTAGTTTGTGCTGTCATACT+TGG | + | chr5_4:59945553-59945572 | Msa0860860:intron | 35.0% |
| AAACTTCTGAGTTCTTCTGA+TGG | + | chr5_4:59945734-59945753 | Msa0860860:intron | 35.0% | |
| AACTTCTGAGTTCTTCTGAT+GGG | + | chr5_4:59945735-59945754 | Msa0860860:intron | 35.0% | |
| !! | TGCTTTTACATGCTTGTTGA+AGG | + | chr5_4:59945775-59945794 | Msa0860860:intron | 35.0% |
| ATTCATTTGCCAACTTTGTC+TGG | + | chr5_4:59945845-59945864 | Msa0860860:CDS | 35.0% | |
| TTCATTTGCCAACTTTGTCT+GGG | + | chr5_4:59945846-59945865 | Msa0860860:CDS | 35.0% | |
| GTAACACACATTTATTTGCG+TGG | + | chr5_4:59945886-59945905 | Msa0860860:intron | 35.0% | |
| GATGGTCAGATATTTACCTT+AGG | - | chr5_4:59946042-59946061 | None:intergenic | 35.0% | |
| !! | CGATGATTGCACTTTTGTTT+TGG | + | chr5_4:59946081-59946100 | Msa0860860:intron | 35.0% |
| GGAAAGAGTCAAATATAGCA+TGG | - | chr5_4:59946230-59946249 | None:intergenic | 35.0% | |
| AGCATTGTTTACATATCACC+TGG | + | chr5_4:59946303-59946322 | Msa0860860:intron | 35.0% | |
| !! | TTTGTATGGGAAAAGTACCA+AGG | - | chr5_4:59946350-59946369 | None:intergenic | 35.0% |
| !! | ATAAGTATTTGATGGTGAGC+AGG | - | chr5_4:59946402-59946421 | None:intergenic | 35.0% |
| ! | CGATTAGTTCCTTAATTCGT+GGG | + | chr5_4:59946439-59946458 | Msa0860860:intron | 35.0% |
| ! | GATTAGTTCCTTAATTCGTG+GGG | + | chr5_4:59946440-59946459 | Msa0860860:intron | 35.0% |
| ! | TCTGTCTTTTCTCACAACTA+AGG | - | chr5_4:59946475-59946494 | None:intergenic | 35.0% |
| AGTTGTGAGAAAAGACAGAA+TGG | + | chr5_4:59946476-59946495 | Msa0860860:intron | 35.0% | |
| CAATGATTAAGCGAGGAAAA+AGG | - | chr5_4:59946643-59946662 | None:intergenic | 35.0% | |
| TTGCTTTGATATTAGCACCA+TGG | + | chr5_4:59946732-59946751 | Msa0860860:intron | 35.0% | |
| TACCAACCAAAAATGACTAC+AGG | - | chr5_4:59946939-59946958 | None:intergenic | 35.0% | |
| TACATTTATGTGGGACACAT+GGG | - | chr5_4:59947137-59947156 | None:intergenic | 35.0% | |
| TTACATTTATGTGGGACACA+TGG | - | chr5_4:59947138-59947157 | None:intergenic | 35.0% | |
| ATGGTAATATTGGGGATTCT+AGG | + | chr5_4:59947511-59947530 | Msa0860860:three_prime_UTR | 35.0% | |
| CTGATCAAACTAGGATTTGA+TGG | + | chr5_4:59947542-59947561 | Msa0860860:three_prime_UTR | 35.0% | |
| !! | ATTTGATGGTAGCGATTTTG+AGG | + | chr5_4:59947556-59947575 | Msa0860860:three_prime_UTR | 35.0% |
| GAGGGGTTGAATTTATTAGA+TGG | + | chr5_4:59947615-59947634 | Msa0860860:three_prime_UTR | 35.0% | |
| TTATTAGATGGCTGTTGTTG+GGG | + | chr5_4:59947627-59947646 | Msa0860860:three_prime_UTR | 35.0% | |
| AAAAAGAAGGAGCCAGAAAC+TGG | + | chr5_4:59938889-59938908 | Msa0860860:CDS | 40.0% | |
| GAGGAAGAGAGAGAGTTATT+AGG | - | chr5_4:59938944-59938963 | None:intergenic | 40.0% | |
| TTCAACCATGTCTTCTATGC+TGG | + | chr5_4:59938977-59938996 | Msa0860860:CDS | 40.0% | |
| ! | TTGATGTTGCTTACGAGTTG+AGG | - | chr5_4:59939153-59939172 | None:intergenic | 40.0% |
| TGACAGAACCTTTATCATCG+TGG | - | chr5_4:59939242-59939261 | None:intergenic | 40.0% | |
| TCTGTCACCATTTCTAACGA+CGG | + | chr5_4:59939255-59939274 | Msa0860860:CDS | 40.0% | |
| ATCAACTAAGATCTTGGCAG+CGG | - | chr5_4:59939316-59939335 | None:intergenic | 40.0% | |
| CAAAATGATGAGATCGGAGT+TGG | - | chr5_4:59939388-59939407 | None:intergenic | 40.0% | |
| TGACTGTTTGAGAGAGCTAA+CGG | - | chr5_4:59939762-59939781 | None:intergenic | 40.0% | |
| GCAAAAGATTAAGGCCTGTT+TGG | + | chr5_4:59939818-59939837 | Msa0860860:intron | 40.0% | |
| GCTTATTTGAGCTTCCATAC+CGG | - | chr5_4:59940063-59940082 | None:intergenic | 40.0% | |
| TTACTTGGACCTGTTTGGAT+TGG | - | chr5_4:59940085-59940104 | None:intergenic | 40.0% | |
| CAAGTTTACTTGGACCTGTT+TGG | - | chr5_4:59940090-59940109 | None:intergenic | 40.0% | |
| ! | CATTGTTGTTGTGACTGTGA+AGG | + | chr5_4:59940310-59940329 | Msa0860860:intron | 40.0% |
| GCAAAGCCTTTCATTGAAGA+TGG | + | chr5_4:59940386-59940405 | Msa0860860:intron | 40.0% | |
| TTATAGGAATGCATGCTCCT+TGG | + | chr5_4:59940436-59940455 | Msa0860860:intron | 40.0% | |
| TGGACGCTGTAATTGCAATT+GGG | + | chr5_4:59940708-59940727 | Msa0860860:CDS | 40.0% | |
| TTGCAATTGGGACTGATGAT+AGG | + | chr5_4:59940720-59940739 | Msa0860860:CDS | 40.0% | |
| CTTCTGCAGGATCAAATTAG+AGG | + | chr5_4:59941031-59941050 | Msa0860860:intron | 40.0% | |
| AAATATGCTCGAGTGTGCTT+TGG | + | chr5_4:59941125-59941144 | Msa0860860:intron | 40.0% | |
| ! | TTGATGGCATGATAGAGATC+TGG | + | chr5_4:59941242-59941261 | Msa0860860:intron | 40.0% |
| GGGAATGAAATGAATAGCAC+AGG | - | chr5_4:59941423-59941442 | None:intergenic | 40.0% | |
| TGTTGTTCCCTCCTCAATAA+AGG | + | chr5_4:59941656-59941675 | Msa0860860:intron | 40.0% | |
| CTAGGTAACCTTTATTGAGG+AGG | - | chr5_4:59941667-59941686 | None:intergenic | 40.0% | |
| TTCATGGGTAGTGAGTGAAA+TGG | - | chr5_4:59942010-59942029 | None:intergenic | 40.0% | |
| CTCACTACCCATGAATAAGT+AGG | + | chr5_4:59942015-59942034 | Msa0860860:intron | 40.0% | |
| CACTACCCATGAATAAGTAG+GGG | + | chr5_4:59942017-59942036 | Msa0860860:intron | 40.0% | |
| TCCAACCCCTACTTATTCAT+GGG | - | chr5_4:59942025-59942044 | None:intergenic | 40.0% | |
| ATCCAACCCCTACTTATTCA+TGG | - | chr5_4:59942026-59942045 | None:intergenic | 40.0% | |
| ACATAGTCATCCATCCACAA+AGG | + | chr5_4:59942245-59942264 | Msa0860860:intron | 40.0% | |
| AGGTCTCTTGGTCATTCTAT+TGG | + | chr5_4:59942265-59942284 | Msa0860860:intron | 40.0% | |
| GGTCTCTTGGTCATTCTATT+GGG | + | chr5_4:59942266-59942285 | Msa0860860:intron | 40.0% | |
| AAACAAACGGTGGGTCAATT+GGG | - | chr5_4:59942307-59942326 | None:intergenic | 40.0% | |
| CATAGGTACAAACAAACGGT+GGG | - | chr5_4:59942316-59942335 | None:intergenic | 40.0% | |
| TCATAGGTACAAACAAACGG+TGG | - | chr5_4:59942317-59942336 | None:intergenic | 40.0% | |
| ! | TGTTATCATAGGTGTCGTGT+TGG | + | chr5_4:59942392-59942411 | Msa0860860:intron | 40.0% |
| ! | GATTTTCTTCTACAGGTTCC+TGG | + | chr5_4:59942624-59942643 | Msa0860860:intron | 40.0% |
| CGTGACTCATTTCTTGTCAA+TGG | + | chr5_4:59942657-59942676 | Msa0860860:CDS | 40.0% | |
| AGGACACGAGAAATAAGAGA+AGG | - | chr5_4:59942891-59942910 | None:intergenic | 40.0% | |
| ! | GATAGAGACATTTTCTGTGC+TGG | + | chr5_4:59943220-59943239 | Msa0860860:intron | 40.0% |
| ATCTTCAATGGATGTCCATC+TGG | + | chr5_4:59943478-59943497 | Msa0860860:CDS | 40.0% | |
| AATTCAACTGTAGTTGCTGG+TGG | + | chr5_4:59943710-59943729 | Msa0860860:CDS | 40.0% | |
| GTTGTCAGATGGAAATAAGC+CGG | + | chr5_4:59943832-59943851 | Msa0860860:intron | 40.0% | |
| ! | TACCTCAAGAGCTTTTGCAT+AGG | - | chr5_4:59943913-59943932 | None:intergenic | 40.0% |
| CAGTGGCTGTTTATCAAAAG+TGG | + | chr5_4:59944137-59944156 | Msa0860860:intron | 40.0% | |
| TTGCGGATCTGGGAAAATAT+TGG | - | chr5_4:59944427-59944446 | None:intergenic | 40.0% | |
| TTTCTCTCAATTGCGGATCT+GGG | - | chr5_4:59944437-59944456 | None:intergenic | 40.0% | |
| ! | TTTTCTCTCAATTGCGGATC+TGG | - | chr5_4:59944438-59944457 | None:intergenic | 40.0% |
| TGTTATTGCAGGTTATTCCC+CGG | + | chr5_4:59944699-59944718 | Msa0860860:intron | 40.0% | |
| AGCATTGTCACATAATTGCC+GGG | - | chr5_4:59944720-59944739 | None:intergenic | 40.0% | |
| CAGCATTGTCACATAATTGC+CGG | - | chr5_4:59944721-59944740 | None:intergenic | 40.0% | |
| ATTTGGAGACGCTTAGAAGT+AGG | + | chr5_4:59944852-59944871 | Msa0860860:intron | 40.0% | |
| TTTGGAGACGCTTAGAAGTA+GGG | + | chr5_4:59944853-59944872 | Msa0860860:intron | 40.0% | |
| TGAATACAAGTTCAAGCTGG+AGG | + | chr5_4:59944927-59944946 | Msa0860860:intron | 40.0% | |
| TGAAGTAACTCACGAATAGG+TGG | + | chr5_4:59945112-59945131 | Msa0860860:intron | 40.0% | |
| TTTGCATGAACAGGAATAGC+TGG | + | chr5_4:59945284-59945303 | Msa0860860:intron | 40.0% | |
| !! | ATGATGATGGGGTGAAACAA+TGG | - | chr5_4:59945397-59945416 | None:intergenic | 40.0% |
| !! | TATGGTTTGCTTCTGAGCAA+GGG | - | chr5_4:59945507-59945526 | None:intergenic | 40.0% |
| !! | ATATGGTTTGCTTCTGAGCA+AGG | - | chr5_4:59945508-59945527 | None:intergenic | 40.0% |
| TGCTAATGTCCTATGCACTT+TGG | + | chr5_4:59945587-59945606 | Msa0860860:intron | 40.0% | |
| TAATGTCCTATGCACTTTGG+TGG | + | chr5_4:59945590-59945609 | Msa0860860:intron | 40.0% | |
| ! | TTACATGCTTGTTGAAGGTG+AGG | + | chr5_4:59945780-59945799 | Msa0860860:intron | 40.0% |
| ! | TACATGCTTGTTGAAGGTGA+GGG | + | chr5_4:59945781-59945800 | Msa0860860:intron | 40.0% |
| TGTGTTACCTTTACAACTGC+AGG | - | chr5_4:59945874-59945893 | None:intergenic | 40.0% | |
| TGCTATAAATGCTGCTACAG+AGG | + | chr5_4:59945975-59945994 | Msa0860860:CDS | 40.0% | |
| TTTCATCCACACTTAAGACC+AGG | - | chr5_4:59946008-59946027 | None:intergenic | 40.0% | |
| ATAGCATGGCACATATCCAA+AGG | - | chr5_4:59946216-59946235 | None:intergenic | 40.0% | |
| GACTGCATGTGAATTTATGC+AGG | - | chr5_4:59946251-59946270 | None:intergenic | 40.0% | |
| CTAGACTCTATACTCAAACC+AGG | - | chr5_4:59946324-59946343 | None:intergenic | 40.0% | |
| AGTATAGAGTCTAGTTGCCT+TGG | + | chr5_4:59946330-59946349 | Msa0860860:intron | 40.0% | |
| ! | GCGATTAGTTCCTTAATTCG+TGG | + | chr5_4:59946438-59946457 | Msa0860860:intron | 40.0% |
| TTCCTTAATTCGTGGGGATT+GGG | + | chr5_4:59946446-59946465 | Msa0860860:intron | 40.0% | |
| TTCTTGGTACAGCTACTACA+TGG | - | chr5_4:59946689-59946708 | None:intergenic | 40.0% | |
| AGCTATCAATGCGAATTCCA+TGG | - | chr5_4:59946752-59946771 | None:intergenic | 40.0% | |
| ! | GGAATTCGCATTGATAGCTT+TGG | + | chr5_4:59946753-59946772 | Msa0860860:intron | 40.0% |
| !!! | TGCCTGTAGTCATTTTTGGT+TGG | + | chr5_4:59946934-59946953 | Msa0860860:intron | 40.0% |
| TACCAGAAACATACATCCAG+TGG | - | chr5_4:59947440-59947459 | None:intergenic | 40.0% | |
| GAGCATCATCTGATCAAACT+AGG | + | chr5_4:59947533-59947552 | Msa0860860:three_prime_UTR | 40.0% | |
| GCTTACCAGCATAGAAGACA+TGG | - | chr5_4:59938985-59939004 | None:intergenic | 45.0% | |
| AACGCGTAACGAAGAAGAGT+TGG | - | chr5_4:59939015-59939034 | None:intergenic | 45.0% | |
| AAGGTACAGACACATCGCAA+GGG | + | chr5_4:59939124-59939143 | Msa0860860:intron | 45.0% | |
| TCAACTAAGATCTTGGCAGC+GGG | - | chr5_4:59939315-59939334 | None:intergenic | 45.0% | |
| TGCTAAGTCTCAAGACTCTG+AGG | + | chr5_4:59939338-59939357 | Msa0860860:CDS | 45.0% | |
| CAATGTCACAAAACGTAGGC+CGG | + | chr5_4:59940041-59940060 | Msa0860860:intron | 45.0% | |
| AGACTGTCTGAGAGAGCTTA+CGG | - | chr5_4:59940200-59940219 | None:intergenic | 45.0% | |
| GTTGTTGTGACTGTGAAGGT+TGG | + | chr5_4:59940314-59940333 | Msa0860860:intron | 45.0% | |
| AGAGCTAGCTGTTAGCATTG+AGG | + | chr5_4:59940580-59940599 | Msa0860860:CDS | 45.0% | |
| ! | GAGCTAGCTGTTAGCATTGA+GGG | + | chr5_4:59940581-59940600 | Msa0860860:CDS | 45.0% |
| GTGGACGCTGTAATTGCAAT+TGG | + | chr5_4:59940707-59940726 | Msa0860860:CDS | 45.0% | |
| ACCATAATGGCTCACCAGTA+TGG | + | chr5_4:59940921-59940940 | Msa0860860:intron | 45.0% | |
| GTGTTTGAGTGTACTTCTGC+AGG | + | chr5_4:59941018-59941037 | Msa0860860:intron | 45.0% | |
| TTTCCTGCGGTTTATTCCAG+TGG | + | chr5_4:59941293-59941312 | Msa0860860:intron | 45.0% | |
| TATCCACTGGAATAAACCGC+AGG | - | chr5_4:59941299-59941318 | None:intergenic | 45.0% | |
| GAGGGAACAACAACAAAGAC+TGG | - | chr5_4:59941648-59941667 | None:intergenic | 45.0% | |
| ACCCATGAATAAGTAGGGGT+TGG | + | chr5_4:59942021-59942040 | Msa0860860:intron | 45.0% | |
| TATGTCTTGGCTCAAGTCAG+TGG | - | chr5_4:59942230-59942249 | None:intergenic | 45.0% | |
| GTGGATGGATGACTATGTCT+TGG | - | chr5_4:59942243-59942262 | None:intergenic | 45.0% | |
| ATCCATCCACAAAGGTCTCT+TGG | + | chr5_4:59942253-59942272 | Msa0860860:intron | 45.0% | |
| GAATGACCAAGAGACCTTTG+TGG | - | chr5_4:59942262-59942281 | None:intergenic | 45.0% | |
| CAAACAAACGGTGGGTCAAT+TGG | - | chr5_4:59942308-59942327 | None:intergenic | 45.0% | |
| TTTCTTCTACAGGTTCCTGG+TGG | + | chr5_4:59942627-59942646 | Msa0860860:intron | 45.0% | |
| GAACAACTTTGGCACCACTT+TGG | - | chr5_4:59942998-59943017 | None:intergenic | 45.0% | |
| ! | TATTGGTGATCTGGCAACAC+AGG | + | chr5_4:59943031-59943050 | Msa0860860:intron | 45.0% |
| AAAAGAGTTGCTGCTGCAAC+TGG | + | chr5_4:59943265-59943284 | Msa0860860:CDS | 45.0% | |
| AAAGAGTTGCTGCTGCAACT+GGG | + | chr5_4:59943266-59943285 | Msa0860860:CDS | 45.0% | |
| GAAGAACTATGGTGGCTGTT+TGG | - | chr5_4:59943504-59943523 | None:intergenic | 45.0% | |
| CCACATGTAACAGACCTGAT+CGG | - | chr5_4:59943536-59943555 | None:intergenic | 45.0% | |
| TGGAAATAAGCCGGTACCTA+AGG | + | chr5_4:59943841-59943860 | Msa0860860:CDS | 45.0% | |
| CTCCTATGCAAAAGCTCTTG+AGG | + | chr5_4:59943908-59943927 | Msa0860860:CDS | 45.0% | |
| CAGTGGCTGTTTAGCAAAAG+TGG | + | chr5_4:59944021-59944040 | Msa0860860:intron | 45.0% | |
| ! | GGCAGCTTTTCTCTCAATTG+CGG | - | chr5_4:59944444-59944463 | None:intergenic | 45.0% |
| CTATGCTCATCGTGGATGAA+GGG | - | chr5_4:59944557-59944576 | None:intergenic | 45.0% | |
| CGATATTCCTATGCTCATCG+TGG | - | chr5_4:59944565-59944584 | None:intergenic | 45.0% | |
| GCATTGTCACATAATTGCCG+GGG | - | chr5_4:59944719-59944738 | None:intergenic | 45.0% | |
| CGGCAATTATGTGACAATGC+TGG | + | chr5_4:59944719-59944738 | Msa0860860:CDS | 45.0% | |
| TTCTAAGCGTCTCCAAATGC+AGG | - | chr5_4:59944850-59944869 | None:intergenic | 45.0% | |
| GATCAGTTCAGGTCTACAAC+AGG | - | chr5_4:59944975-59944994 | None:intergenic | 45.0% | |
| CAAGAGCTTGAGATCAGTTC+AGG | - | chr5_4:59944986-59945005 | None:intergenic | 45.0% | |
| TTGAAGCCACCAAAGTGCAT+AGG | - | chr5_4:59945599-59945618 | None:intergenic | 45.0% | |
| CACAGGCACACATGAATTCA+AGG | - | chr5_4:59945663-59945682 | None:intergenic | 45.0% | |
| TTCATGTGTGCCTGTGTGTA+TGG | + | chr5_4:59945667-59945686 | Msa0860860:intron | 45.0% | |
| TCATGTGTGCCTGTGTGTAT+GGG | + | chr5_4:59945668-59945687 | Msa0860860:intron | 45.0% | |
| TGAATCAGCAATTCCACCAG+TGG | - | chr5_4:59945830-59945849 | None:intergenic | 45.0% | |
| GTTCCTTAATTCGTGGGGAT+TGG | + | chr5_4:59946445-59946464 | Msa0860860:intron | 45.0% | |
| ATCCCAATCCCCACGAATTA+AGG | - | chr5_4:59946451-59946470 | None:intergenic | 45.0% | |
| AAATGGAATCCTGCTGAGGA+TGG | - | chr5_4:59946507-59946526 | None:intergenic | 45.0% | |
| TTAAGCGAGGAAAAAGGGAG+AGG | - | chr5_4:59946637-59946656 | None:intergenic | 45.0% | |
| GCTGCTTCAATGATTAAGCG+AGG | - | chr5_4:59946650-59946669 | None:intergenic | 45.0% | |
| !! | GGGATGCCTGTAGTCATTTT+TGG | + | chr5_4:59946930-59946949 | Msa0860860:intron | 45.0% |
| TGTAATATGCGCAATGCCAC+TGG | + | chr5_4:59947421-59947440 | Msa0860860:three_prime_UTR | 45.0% | |
| TGCCACTGGATGTATGTTTC+TGG | + | chr5_4:59947435-59947454 | Msa0860860:three_prime_UTR | 45.0% | |
| !!! | ATGGTAGCGATTTTGAGGCA+TGG | + | chr5_4:59947561-59947580 | Msa0860860:three_prime_UTR | 45.0% |
| !! | AAATATGTAAAAAAAAATAT+TGG | + | chr5_4:59941807-59941826 | Msa0860860:intron | 5.0% |
| ! | ATGGTTGAAGACGGTGATGG+AGG | - | chr5_4:59938966-59938985 | None:intergenic | 50.0% |
| GACATGGTTGAAGACGGTGA+TGG | - | chr5_4:59938969-59938988 | None:intergenic | 50.0% | |
| ! | GAAGGTACAGACACATCGCA+AGG | + | chr5_4:59939123-59939142 | Msa0860860:intron | 50.0% |
| ATGAGTTTGTCCATACCGCG+AGG | - | chr5_4:59939219-59939238 | None:intergenic | 50.0% | |
| AGTAGCGCCGTCGTTAGAAA+TGG | - | chr5_4:59939265-59939284 | None:intergenic | 50.0% | |
| TCACAAAACGTAGGCCGGTA+TGG | + | chr5_4:59940046-59940065 | Msa0860860:intron | 50.0% | |
| CTGAGAGAGCTTACGGAAAC+AGG | - | chr5_4:59940193-59940212 | None:intergenic | 50.0% | |
| TGCAAGCAATACCACAGTGG+TGG | - | chr5_4:59940348-59940367 | None:intergenic | 50.0% | |
| AGCTGCAAGCAATACCACAG+TGG | - | chr5_4:59940351-59940370 | None:intergenic | 50.0% | |
| GCCATACTGGTGAGCCATTA+TGG | - | chr5_4:59940925-59940944 | None:intergenic | 50.0% | |
| AATGGCTCACCAGTATGGCA+AGG | + | chr5_4:59940926-59940945 | Msa0860860:intron | 50.0% | |
| ATTGGAGAGCCTTGCCATAC+TGG | - | chr5_4:59940938-59940957 | None:intergenic | 50.0% | |
| GAATGTCCACTTTCGAGCAG+TGG | + | chr5_4:59941928-59941947 | Msa0860860:intron | 50.0% | |
| GACCAAGAGACCTTTGTGGA+TGG | - | chr5_4:59942258-59942277 | None:intergenic | 50.0% | |
| TGTCTGTGTCCGTGCTTCAT+AGG | - | chr5_4:59942333-59942352 | None:intergenic | 50.0% | |
| ! | CATAGGTGTCGTGTTGGTGT+CGG | + | chr5_4:59942398-59942417 | Msa0860860:intron | 50.0% |
| TATGAAGCACGGACACTCCT+CGG | - | chr5_4:59942460-59942479 | None:intergenic | 50.0% | |
| CAGGCGTGAGAGAACAACTT+TGG | - | chr5_4:59943009-59943028 | None:intergenic | 50.0% | |
| CAAAGTTGTTCTCTCACGCC+TGG | + | chr5_4:59943007-59943026 | Msa0860860:intron | 50.0% | |
| TTGCCAGATCACCAATAGCC+AGG | - | chr5_4:59943028-59943047 | None:intergenic | 50.0% | |
| AAGAGTTGCTGCTGCAACTG+GGG | + | chr5_4:59943267-59943286 | Msa0860860:CDS | 50.0% | |
| ACAGCCACCATAGTTCTTCG+TGG | + | chr5_4:59943505-59943524 | Msa0860860:CDS | 50.0% | |
| TCCACCACGAAGAACTATGG+TGG | - | chr5_4:59943512-59943531 | None:intergenic | 50.0% | |
| CCGATCAGGTCTGTTACATG+TGG | + | chr5_4:59943533-59943552 | Msa0860860:intron | 50.0% | |
| TCAACTGTAGTTGCTGGTGG+AGG | + | chr5_4:59943713-59943732 | Msa0860860:CDS | 50.0% | |
| CCTATGCTCATCGTGGATGA+AGG | - | chr5_4:59944558-59944577 | None:intergenic | 50.0% | |
| CCTTCATCCACGATGAGCAT+AGG | + | chr5_4:59944555-59944574 | Msa0860860:intron | 50.0% | |
| ACGAAGGTCAACCAACCAGA+AGG | - | chr5_4:59944794-59944813 | None:intergenic | 50.0% | |
| GGGGTGAAACAATGGTCAAG+AGG | - | chr5_4:59945389-59945408 | None:intergenic | 50.0% | |
| TCAGGTACACCCATACACAC+AGG | - | chr5_4:59945680-59945699 | None:intergenic | 50.0% | |
| !! | AAGGTGAGGGTGCTCCATTT+GGG | + | chr5_4:59945794-59945813 | Msa0860860:intron | 50.0% |
| !! | AGCTTGCCTGGTCTTAAGTG+TGG | + | chr5_4:59945999-59946018 | Msa0860860:CDS | 50.0% |
| ATGGTGTTTCCATCCTCAGC+AGG | + | chr5_4:59946495-59946514 | Msa0860860:intron | 50.0% | |
| CTGGAAATGGAATCCTGCTG+AGG | - | chr5_4:59946511-59946530 | None:intergenic | 50.0% | |
| ! | ATGTAGTCCGAGAGTGCACA+AGG | + | chr5_4:59947272-59947291 | Msa0860860:intron | 50.0% |
| ATCTACGCATTCCTCGTCCA+CGG | - | chr5_4:59947352-59947371 | None:intergenic | 50.0% | |
| !! | GTTGAAGACGGTGATGGAGG+AGG | - | chr5_4:59938963-59938982 | None:intergenic | 55.0% |
| TAGGGTGGTTCGAACGACGT+CGG | - | chr5_4:59939193-59939212 | None:intergenic | 55.0% | |
| GTGACTGTGAAGGTTGGCGA+TGG | + | chr5_4:59940320-59940339 | Msa0860860:intron | 55.0% | |
| AATAGCACAGGCACAGCGAG+TGG | - | chr5_4:59941411-59941430 | None:intergenic | 55.0% | |
| GAGCAACCACTGCTCGAAAG+TGG | - | chr5_4:59941937-59941956 | None:intergenic | 55.0% | |
| GAGTCACGCATGTTACCACC+AGG | - | chr5_4:59942645-59942664 | None:intergenic | 55.0% | |
| GTTCTCTCACGCCTGGCTAT+TGG | + | chr5_4:59943014-59943033 | Msa0860860:intron | 55.0% | |
| ! | ACGCCTGGCTATTGGTGATC+TGG | + | chr5_4:59943022-59943041 | Msa0860860:intron | 55.0% |
| AGAGTTGCTGCTGCAACTGG+GGG | + | chr5_4:59943268-59943287 | Msa0860860:CDS | 55.0% | |
| ATGGTGGCTGTTTGGCCAGA+TGG | - | chr5_4:59943496-59943515 | None:intergenic | 55.0% | |
| GCCACCATAGTTCTTCGTGG+TGG | + | chr5_4:59943508-59943527 | Msa0860860:CDS | 55.0% | |
| GGCTCCACCACGAAGAACTA+TGG | - | chr5_4:59943515-59943534 | None:intergenic | 55.0% | |
| GTGCATGCTGCCTTAGGTAC+CGG | - | chr5_4:59943854-59943873 | None:intergenic | 55.0% | |
| TTGTGCGTGCATGCTGCCTT+AGG | - | chr5_4:59943860-59943879 | None:intergenic | 55.0% | |
| CAGCATGCACGCACAATAGC+TGG | + | chr5_4:59943864-59943883 | Msa0860860:CDS | 55.0% | |
| CAGAAACACGCGCTTCCTTC+TGG | + | chr5_4:59944776-59944795 | Msa0860860:CDS | 55.0% | |
| AACACGCGCTTCCTTCTGGT+TGG | + | chr5_4:59944780-59944799 | Msa0860860:intron | 55.0% | |
| GTTCAGGTCTACAACAGGCC+AGG | - | chr5_4:59944970-59944989 | None:intergenic | 55.0% | |
| !! | GAAGGTGAGGGTGCTCCATT+TGG | + | chr5_4:59945793-59945812 | Msa0860860:intron | 55.0% |
| !! | AGGTGAGGGTGCTCCATTTG+GGG | + | chr5_4:59945795-59945814 | Msa0860860:intron | 55.0% |
| GTGGCTATGTCGACCCCAAA+TGG | - | chr5_4:59945811-59945830 | None:intergenic | 55.0% | |
| ! | TTTGGGGTCGACATAGCCAC+TGG | + | chr5_4:59945811-59945830 | Msa0860860:CDS | 55.0% |
| TGCAGGCTCCCAGACAAAGT+TGG | - | chr5_4:59945857-59945876 | None:intergenic | 55.0% | |
| CTGGGAGCCTGCAGTTGTAA+AGG | + | chr5_4:59945864-59945883 | Msa0860860:CDS | 55.0% | |
| AGCCTCTCCTTGTGCACTCT+CGG | - | chr5_4:59947282-59947301 | None:intergenic | 55.0% | |
| GACGTCGTTCGAACCACCCT+AGG | + | chr5_4:59939192-59939211 | Msa0860860:CDS | 60.0% | |
| GTCCATACCGCGAGGACCTA+GGG | - | chr5_4:59939211-59939230 | None:intergenic | 60.0% | |
| TGTCCATACCGCGAGGACCT+AGG | - | chr5_4:59939212-59939231 | None:intergenic | 60.0% | |
| TGGCGATGGAACCACCACTG+TGG | + | chr5_4:59940334-59940353 | Msa0860860:intron | 60.0% | |
| CACGGACACAGACACCGACA+CGG | + | chr5_4:59942339-59942358 | Msa0860860:intron | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr5_4:59942438-59942457 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr5_4:59942444-59942463 | None:intergenic | 60.0% |
| GCACGGACACTCCTCGGATT+AGG | - | chr5_4:59942454-59942473 | None:intergenic | 60.0% | |
| ! | TCTTCGTGGTGGAGCCGATC+AGG | + | chr5_4:59943519-59943538 | Msa0860860:CDS | 60.0% |
| CTCATCGTGGATGAAGGGCG+TGG | - | chr5_4:59944552-59944571 | None:intergenic | 60.0% | |
| TGCTACAGAGGCAGCTTGCC+TGG | + | chr5_4:59945987-59946006 | Msa0860860:CDS | 60.0% | |
| ! | GTCCGAGAGTGCACAAGGAG+AGG | + | chr5_4:59947277-59947296 | Msa0860860:intron | 60.0% |
| AGAGGCTGCTGCAAGTGCCA+TGG | + | chr5_4:59947295-59947314 | Msa0860860:CDS | 60.0% | |
| GAGGCTGCTGCAAGTGCCAT+GGG | + | chr5_4:59947296-59947315 | Msa0860860:CDS | 60.0% | |
| GGTTCGAACGACGTCGGCGA+CGG | - | chr5_4:59939187-59939206 | None:intergenic | 65.0% | |
| CGAACCACCCTAGGTCCTCG+CGG | + | chr5_4:59939201-59939220 | Msa0860860:CDS | 65.0% | |
| CATACCGCGAGGACCTAGGG+TGG | - | chr5_4:59939208-59939227 | None:intergenic | 65.0% | |
| CACCCTAGGTCCTCGCGGTA+TGG | + | chr5_4:59939206-59939225 | Msa0860860:CDS | 65.0% | |
| ACCGGGACACGCCTAATCCG+AGG | + | chr5_4:59942440-59942459 | Msa0860860:intron | 65.0% | |
| GGGGTCGACATAGCCACTGG+TGG | + | chr5_4:59945814-59945833 | Msa0860860:CDS | 65.0% | |
| GCTGCTGCAAGTGCCATGGG+AGG | + | chr5_4:59947299-59947318 | Msa0860860:CDS | 65.0% | |
| GCAAGTGCCATGGGAGGCAG+AGG | + | chr5_4:59947305-59947324 | Msa0860860:CDS | 65.0% | |
| GCATTCCTCGTCCACGGCCA+CGG | - | chr5_4:59947346-59947365 | None:intergenic | 65.0% | |
| CTCCGACGCGTGTCCGACAC+CGG | + | chr5_4:59942422-59942441 | Msa0860860:intron | 70.0% | |
| TCCGACGCGTGTCCGACACC+GGG | + | chr5_4:59942423-59942442 | Msa0860860:intron | 70.0% | |
| ! | TCCCGGTGTCGGACACGCGT+CGG | - | chr5_4:59942427-59942446 | None:intergenic | 70.0% |
| GCCATGGGAGGCAGAGGTCG+CGG | + | chr5_4:59947311-59947330 | Msa0860860:CDS | 70.0% | |
| TCCGCGACCTCTGCCTCCCA+TGG | - | chr5_4:59947315-59947334 | None:intergenic | 70.0% | |
| ATGGGAGGCAGAGGTCGCGG+AGG | + | chr5_4:59947314-59947333 | Msa0860860:CDS | 70.0% | |
| GGTCGCGGAGGTGGTTTCCG+TGG | + | chr5_4:59947326-59947345 | Msa0860860:CDS | 70.0% | |
| GGAGGTGGTTTCCGTGGCCG+TGG | + | chr5_4:59947332-59947351 | Msa0860860:CDS | 70.0% | |
| GGTTTCCGTGGCCGTGGACG+AGG | + | chr5_4:59947338-59947357 | Msa0860860:CDS | 70.0% | |
| GGAGGCAGAGGTCGCGGAGG+TGG | + | chr5_4:59947317-59947336 | Msa0860860:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 59938815 | 59947776 | 59938815 | ID=Msa0860860;Name=Msa0860860 |
| chr5_4 | mRNA | 59938815 | 59947776 | 59938815 | ID=Msa0860860-mRNA-1;Parent=Msa0860860;Name=Msa0860860-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.72|0.75|1|0.81|0.83|12|403|514 |
| chr5_4 | exon | 59938815 | 59938998 | 59938815 | ID=Msa0860860-mRNA-1:exon:18459;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59939133 | 59939359 | 59939133 | ID=Msa0860860-mRNA-1:exon:18460;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59940563 | 59940766 | 59940563 | ID=Msa0860860-mRNA-1:exon:18461;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59942639 | 59942808 | 59942639 | ID=Msa0860860-mRNA-1:exon:18462;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59943225 | 59943327 | 59943225 | ID=Msa0860860-mRNA-1:exon:18463;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59943421 | 59943540 | 59943421 | ID=Msa0860860-mRNA-1:exon:18464;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59943647 | 59943745 | 59943647 | ID=Msa0860860-mRNA-1:exon:18465;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59943840 | 59943929 | 59943840 | ID=Msa0860860-mRNA-1:exon:18466;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59944710 | 59944797 | 59944710 | ID=Msa0860860-mRNA-1:exon:18467;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59945797 | 59945885 | 59945797 | ID=Msa0860860-mRNA-1:exon:18468;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59945970 | 59946044 | 59945970 | ID=Msa0860860-mRNA-1:exon:18469;Parent=Msa0860860-mRNA-1 |
| chr5_4 | exon | 59947278 | 59947776 | 59947278 | ID=Msa0860860-mRNA-1:exon:18470;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59938815 | 59938998 | 59938815 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59939133 | 59939359 | 59939133 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59940563 | 59940766 | 59940563 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59942639 | 59942808 | 59942639 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59943225 | 59943327 | 59943225 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59943421 | 59943540 | 59943421 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59943647 | 59943745 | 59943647 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59943840 | 59943929 | 59943840 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59944710 | 59944797 | 59944710 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59945797 | 59945885 | 59945797 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59945970 | 59946044 | 59945970 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | CDS | 59947278 | 59947373 | 59947278 | ID=Msa0860860-mRNA-1:cds;Parent=Msa0860860-mRNA-1 |
| chr5_4 | three_prime_UTR | 59947374 | 59947776 | 59947374 | ID=Msa0860860-mRNA-1:three_prime_utr;Parent=Msa0860860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
