AlfalfaGEDB | Msa0394860

M. sativa cultivar zhongmu-4 / Msa0394860

KEGG: K15178
GO: GO:0000122 GO:0000428 GO:0000988 GO:0000989 GO:0000993 GO:0001076 GO:0001098 GO:0001099 GO:0001701 GO:0001704 GO:0001706 GO:0001711 GO:0001824 GO:0001832 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007369 GO:0007492 GO:0008023 GO:0008150 GO:0008152 GO:0008213 GO:0009653 GO:0009790 GO:0009792 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009909 GO:0009910 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016591 GO:0016593 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0019827 GO:0019899 GO:0030154 GO:0030880 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0033043 GO:0033044 GO:0034243 GO:0034968 GO:0035987 GO:0036211 GO:0040007 GO:0043009 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045165 GO:0045309 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048581 GO:0048589 GO:0048598 GO:0048646 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050815 GO:0051093 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051219 GO:0051239 GO:0051241 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051568 GO:0051569 GO:0051571 GO:0055029 GO:0060255 GO:0060795 GO:0061695 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0071840 GO:0080090 GO:0080182 GO:0097159 GO:0098727 GO:0099122 GO:0140110 GO:1901363 GO:1901564 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905269 GO:1990234 GO:1990269 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141 GO:2001252
PFAM: PF03126.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0394860	XP_003625428.1	89.155	627	38	4	9	608	1	624	0.0	1009

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0394860	sp\|Q9C950\|VIP5_ARATH	62.676	568	198	9	47	608	84	643	0.0	623

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0394860	G7KYI5	89.155	627	38	4	9	608	1	624	0.0	1009

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0015390	Msa0394860	0.814277	1.672352e-51	-8.615850e-47
Msa0026910	Msa0394860	0.800204	1.608640e-48	-8.615850e-47
Msa0037120	Msa0394860	0.808059	3.730483e-50	-8.615850e-47
Msa0237310	Msa0394860	0.821043	4.980584e-53	-8.615850e-47
Msa0394860	Msa0426640	0.804754	1.855941e-49	-8.615850e-47
Msa0394860	Msa0439970	0.811235	7.747794e-51	-8.615850e-47
Msa0394860	Msa0484780	0.811918	5.505525e-51	-8.615850e-47
Msa0394860	Msa0495320	0.813433	2.566429e-51	-8.615850e-47
Msa0394860	Msa0576880	0.813505	2.474542e-51	-8.615850e-47
Msa0394860	Msa0685750	0.807039	6.141044e-50	-8.615850e-47
Msa0394860	Msa0703050	0.823311	1.483115e-53	-8.615850e-47
Msa0394860	Msa0795250	0.804750	1.859653e-49	-8.615850e-47
Msa0394860	Msa0816710	0.800284	1.549201e-48	-8.615850e-47
Msa0394860	Msa0832090	0.801334	9.454576e-49	-8.615850e-47
Msa0394860	Msa0861540	0.807386	5.183946e-50	-8.615850e-47
Msa0394860	Msa0933450	0.800515	1.389880e-48	-8.615850e-47
Msa0394860	Msa1032850	0.800418	1.454476e-48	-8.615850e-47
Msa0394860	Msa1199570	0.803244	3.824127e-49	-8.615850e-47
Msa0394860	Msa1328640	0.801394	9.193969e-49	-8.615850e-47
Msa0394860	Msa1353470	0.814575	1.436721e-51	-8.615850e-47
Msa0245940	Msa0394860	0.812908	3.346065e-51	-8.615850e-47
Msa0274730	Msa0394860	0.820861	5.483068e-53	-8.615850e-47
Msa0284520	Msa0394860	0.818194	2.226377e-52	-8.615850e-47
Msa0286670	Msa0394860	0.804287	2.322771e-49	-8.615850e-47
Msa0292930	Msa0394860	0.817687	2.898181e-52	-8.615850e-47
Msa0315530	Msa0394860	0.813247	2.819848e-51	-8.615850e-47
Msa0326110	Msa0394860	0.804017	2.642977e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0394860	MtrunA17_Chr7g0262441	89.155	627	38	4	9	608	1	624	0.0	1009
Msa0394860	MtrunA17_Chr4g0047731	63.374	658	180	8	9	608	1	655	0.0	764
Msa0394860	MtrunA17_Chr4g0014481	48.187	662	266	8	9	608	1	647	0.0	540
Msa0394860	MtrunA17_Chr4g0014471	60.000	40	16	0	569	608	3	42	1.28e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	bit score
Msa0394860	AT1G61040.3	62.676	568	198	9	47	608	84	643	623
Msa0394860	AT1G61040.2	62.676	568	198	9	47	608	84	643	623
Msa0394860	AT1G61040.1	62.676	568	198	9	47	608	84	643	623

Find 174 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAACTTACAAAATGGTTTA+TGG	0.170699	3_2:-10015713	Msa0394860:CDS
AGAATTCAGATCCAGGTTTA+TGG	0.177772	3_2:-10014292	Msa0394860:three_prime_UTR
CGTCCTTCTCCCGAGATTTC+CGG	0.188455	3_2:+10015167	None:intergenic
GGGAGTTCAGGCAGGGTTTA+TGG	0.216936	3_2:-10014744	Msa0394860:CDS
AACCTTGAAGGGTTACAAAT+TGG	0.223889	3_2:-10014180	Msa0394860:three_prime_UTR
AAAGAGGGGTCTAAAATTTC+AGG	0.225292	3_2:-10015937	Msa0394860:CDS
TGGCTTGAGCTACTGAAATT+AGG	0.237330	3_2:+10015886	None:intergenic
GCTTTCAATGCTTTATTAAC+TGG	0.248153	3_2:+10015070	None:intergenic
TTGACATTTACTTAGGTAAT+AGG	0.252703	3_2:-10017208	Msa0394860:intron
AGTGTCTTTGTAATGTTTAT+TGG	0.265714	3_2:-10014258	Msa0394860:three_prime_UTR
TGCCACATTGCTAGCGATAT+TGG	0.271011	3_2:+10014785	None:intergenic
CAAGGTCAAAACTTACAAAA+TGG	0.282281	3_2:-10015720	Msa0394860:CDS
GGAATATCTTGGAATATAAA+AGG	0.287775	3_2:+10014417	None:intergenic
TTCTCAGCTGCAACATTTAG+TGG	0.297595	3_2:+10015286	None:intergenic
ACATGCAGGCAGACAAATTA+TGG	0.302830	3_2:-10016427	Msa0394860:intron
CAGAGAATTGAAGAAGTTGT+TGG	0.303542	3_2:-10014713	Msa0394860:CDS
GTCCTTCTCCCGAGATTTCC+GGG	0.324137	3_2:+10015168	None:intergenic
GACGGCCACTGCCGAGGCTT+TGG	0.334682	3_2:-10014897	Msa0394860:CDS
TGATTGTTGGTTGTTTCGTT+AGG	0.335264	3_2:-10015672	Msa0394860:CDS
GAGGCTTTGGAAGCTGCTGC+TGG	0.336521	3_2:-10014884	Msa0394860:CDS
CTCACGCTTGGATGCTATCT+TGG	0.336928	3_2:+10016125	None:intergenic
TTGGAAGCTGCTGCTGGTGC+TGG	0.337203	3_2:-10014878	Msa0394860:CDS
CTAGTCCATCTCCTTGAAAA+AGG	0.345767	3_2:+10015028	None:intergenic
AGCATTAAAGTTTAGATTTG+TGG	0.347326	3_2:-10014483	Msa0394860:three_prime_UTR
TCTAATTTATACAGTCGATT+AGG	0.352085	3_2:+10015577	None:intergenic
TGATTTAGAAAATGACCTTT+TGG	0.354336	3_2:-10016403	Msa0394860:CDS
GTGTCTTTGTAATGTTTATT+GGG	0.354395	3_2:-10014257	Msa0394860:three_prime_UTR
TGGTGGAGCGCAGGGAGTTC+AGG	0.374759	3_2:-10014756	Msa0394860:CDS
ATCCAATTTGTAACCCTTCA+AGG	0.375356	3_2:+10014178	None:intergenic
TTCAGCTCGCGATGTGCTTC+CGG	0.380178	3_2:+10015958	None:intergenic
GACTCTGTTCCTTCATCCAC+TGG	0.384610	3_2:+10014833	None:intergenic
CCAGACAAAACTGCAAGAAT+TGG	0.386133	3_2:-10015197	Msa0394860:CDS
GAACCGGTTGAAAAGGGAAT+TGG	0.387225	3_2:-10015263	Msa0394860:CDS
CTGAGATGAACAGAAAGAAC+AGG	0.394551	3_2:-10015126	Msa0394860:CDS
AAATAAATCCCGGAATATCT+TGG	0.397480	3_2:+10014406	None:intergenic
ACCTACTTTCACTTTCACTA+TGG	0.405201	3_2:+10015866	None:intergenic
GGAGCGCAGGGAGTTCAGGC+AGG	0.411409	3_2:-10014752	Msa0394860:CDS
GCAGCTGGAAATAATACTTC+TGG	0.411995	3_2:-10014965	Msa0394860:CDS
TCTGGTGGTGCAGTGGGTGA+TGG	0.416049	3_2:-10014947	Msa0394860:CDS
ACAAGTACTTGAATGTTGTC+TGG	0.416298	3_2:-10015540	Msa0394860:CDS
TTTATATTCCAAGATATTCC+GGG	0.417016	3_2:-10014414	Msa0394860:three_prime_UTR
TGTTTCGTTAGGGTTGGTAT+TGG	0.420135	3_2:-10015661	Msa0394860:CDS
CTCTGCTGCGAGGTGGCAAA+TGG	0.421789	3_2:-10015506	Msa0394860:CDS
AGCATCCAAGCGTGAGAAGA+AGG	0.426279	3_2:-10016118	Msa0394860:CDS
CTCTATTACAAGGCAAAAGT+TGG	0.433637	3_2:-10014571	Msa0394860:three_prime_UTR
GGGTCTAAAATTTCAGGATC+AGG	0.435083	3_2:-10015931	Msa0394860:CDS
CCAGCTGCAGCCTCTTCAGC+CGG	0.436278	3_2:+10014980	None:intergenic
GTCTGATAGGGCTGCTAAGA+AGG	0.438794	3_2:-10016166	Msa0394860:CDS
GGAGTTTAAACAGTGGGTTA+AGG	0.439170	3_2:-10015452	Msa0394860:CDS
CTGAGAAGAACCGGTTGAAA+AGG	0.439527	3_2:-10015270	Msa0394860:CDS
GTTGGTTGTTTCGTTAGGGT+TGG	0.442169	3_2:-10015667	Msa0394860:CDS
TCGTTAGGGTTGGTATTGGC+AGG	0.445479	3_2:-10015657	Msa0394860:CDS
GCATTGAAAGCAGGGGAGGC+AGG	0.447530	3_2:-10015058	Msa0394860:CDS
AATCTAAACTTTAATGCTAA+GGG	0.447688	3_2:+10014488	None:intergenic
AAATTAGGTTTCCCTATTTG+CGG	0.450487	3_2:+10015901	None:intergenic
GTTAATAAAGCATTGAAAGC+AGG	0.455533	3_2:-10015067	Msa0394860:CDS
TGGAGGAATCCCGGAAATCT+CGG	0.458345	3_2:-10015177	Msa0394860:CDS
CAAAGACTGGGCCTATCTAC+AGG	0.458836	3_2:-10015633	Msa0394860:CDS
CCGGCTGAAGAGGCTGCAGC+TGG	0.464826	3_2:-10014980	Msa0394860:CDS
TTCTGACAGGTCAGCTGCTA+AGG	0.465616	3_2:-10016028	Msa0394860:CDS
CAAATTGGATCAACCAGCCT+TGG	0.467807	3_2:-10014165	Msa0394860:three_prime_UTR
ATTTCCCTTCTTCTCACGCT+TGG	0.468118	3_2:+10016113	None:intergenic
CTCAGAAAGCCTCAGAGCCT+TGG	0.470974	3_2:+10015144	None:intergenic
GATGGAGGCAGCAATGGGAT+TGG	0.471168	3_2:-10014929	Msa0394860:CDS
GAACTACTATAATTCAAAAC+CGG	0.473536	3_2:-10014999	Msa0394860:CDS
ATTTGAAAAGCCATCGTTTG+AGG	0.474055	3_2:-10015764	Msa0394860:CDS
ATGTTGCAGCTGAGAAGAAC+CGG	0.474646	3_2:-10015279	Msa0394860:CDS
AAATCTAAACTTTAATGCTA+AGG	0.477655	3_2:+10014487	None:intergenic
GATTGTTGGTTGTTTCGTTA+GGG	0.478505	3_2:-10015671	Msa0394860:CDS
GCCTATCTACAGGCTCTGTA+TGG	0.481256	3_2:-10015623	Msa0394860:CDS
AGCAGCAGCTTCCAAAGCCT+CGG	0.484282	3_2:+10014886	None:intergenic
GGTATTGGCAGGTCAAAGAC+TGG	0.484693	3_2:-10015646	Msa0394860:CDS
CAAGGAGATGGACTAGATCA+AGG	0.488397	3_2:-10015021	Msa0394860:CDS
ATCAGAGTCATCATCGTCTC+CGG	0.491148	3_2:+10016320	None:intergenic
TGAGAAGAACCGGTTGAAAA+GGG	0.493411	3_2:-10015269	Msa0394860:CDS
GTTCTGACCGTGAGGTGGAC+AGG	0.495463	3_2:-10016287	Msa0394860:CDS
CAAGTACTTGAATGTTGTCT+GGG	0.495702	3_2:-10015539	Msa0394860:CDS
CGAGAAGACGGAAGAGGAGG+CGG	0.500413	3_2:+10016072	None:intergenic
AACATTCAAGTACTTGTATG+TGG	0.501552	3_2:+10015546	None:intergenic
GTTTAAACTCCTCCTCAAGC+GGG	0.503277	3_2:+10015464	None:intergenic
ACCATACAGAGCCTGTAGAT+AGG	0.505421	3_2:+10015622	None:intergenic
TGCAAGAATTGGAGGAATCC+CGG	0.506961	3_2:-10015186	Msa0394860:CDS
TTGTAATAGAGTTGACCAAA+AGG	0.508427	3_2:+10014583	None:intergenic
GTGGGTGATGGAGGCAGCAA+TGG	0.511883	3_2:-10014935	Msa0394860:CDS
AGCTTCCAAAGCCTCGGCAG+TGG	0.512251	3_2:+10014892	None:intergenic
TCACTGCGAAAGTTAGATTG+AGG	0.514217	3_2:-10014350	Msa0394860:three_prime_UTR
TGCTGCTGGTGCTGGAAAGT+TGG	0.516833	3_2:-10014870	Msa0394860:CDS
CTTCAACATCCTCGTCACTA+CGG	0.517935	3_2:+10015842	None:intergenic
GAAGCTTTGTCTGAAAATGA+AGG	0.519185	3_2:-10015823	Msa0394860:CDS
CGATGATCTTTACAAGGATG+AGG	0.522524	3_2:-10016241	Msa0394860:CDS
GACAAAACTGCAAGAATTGG+AGG	0.524371	3_2:-10015194	Msa0394860:CDS
TTCAACATCCTCGTCACTAC+GGG	0.525338	3_2:+10015843	None:intergenic
GGAGGAATCCCGGAAATCTC+GGG	0.526557	3_2:-10015176	Msa0394860:CDS
TTAATAAAGCATTGAAAGCA+GGG	0.529926	3_2:-10015066	Msa0394860:CDS
GGCAGCAATGGGATTGGAGC+TGG	0.532641	3_2:-10014923	Msa0394860:CDS
GGTGGTGCAGTGGGTGATGG+AGG	0.533573	3_2:-10014944	Msa0394860:CDS
TTTGAACTTACAACCTTGAA+GGG	0.533981	3_2:-10014191	Msa0394860:three_prime_UTR
TGGGTGATGGAGGCAGCAAT+GGG	0.535163	3_2:-10014934	Msa0394860:CDS
AAGCTTTGTCTGAAAATGAA+GGG	0.535182	3_2:-10015822	Msa0394860:CDS
TAATTCAAAACCGGCTGAAG+AGG	0.535280	3_2:-10014990	Msa0394860:CDS
TGTCTGGATCTTCTCTACTC+CGG	0.540198	3_2:+10015213	None:intergenic
TGAGGAGGAGTTTAAACAGT+GGG	0.546108	3_2:-10015458	Msa0394860:CDS
TGAATGAACTGCGTGCTAAG+AGG	0.547152	3_2:-10015996	Msa0394860:CDS
AGCACATCGCGAGCTGAAAG+AGG	0.547212	3_2:-10015953	Msa0394860:CDS
GAGCGCAGGGAGTTCAGGCA+GGG	0.549229	3_2:-10014751	Msa0394860:CDS
ATCCCGGAAATCTCGGGAGA+AGG	0.549427	3_2:-10015170	Msa0394860:CDS
GAGGCTGAAACAGCGAGAGC+CGG	0.553800	3_2:-10015977	Msa0394860:CDS
TTATACCAGCAGCCTCCAAA+AGG	0.555238	3_2:+10016388	None:intergenic
TGGTATGACGGCCACTGCCG+AGG	0.559819	3_2:-10014903	Msa0394860:CDS
ACGTCTAATTTCCATAAACC+TGG	0.561028	3_2:+10014281	None:intergenic
AAGTAGAGCGAAGTGGTGGC+CGG	0.562543	3_2:-10015429	Msa0394860:CDS
GGTGATTACAAGAGAAGAAG+AGG	0.564356	3_2:-10014638	Msa0394860:CDS
CATCTAGCCTCTTCAGCATC+CGG	0.564400	3_2:+10015410	None:intergenic
GAAAGCAAGAACGATGCAGC+CGG	0.567987	3_2:-10015232	Msa0394860:CDS
CATTTGCCACCTCGCAGCAG+AGG	0.570644	3_2:+10015507	None:intergenic
TAAAAGACTTAAACGAAGGA+AGG	0.571145	3_2:+10014119	None:intergenic
ACAAGAGCTCCAGTGGATGA+AGG	0.572277	3_2:-10014842	Msa0394860:CDS
GTGGTGGCCGGATGCTGAAG+AGG	0.573366	3_2:-10015417	Msa0394860:CDS
GACAGGTCAGCTGCTAAGGA+TGG	0.574292	3_2:-10016024	Msa0394860:CDS
GATGATGACAAGATAATGCC+TGG	0.576356	3_2:-10015787	Msa0394860:CDS
ATCTAAACTTTAATGCTAAG+GGG	0.579152	3_2:+10014489	None:intergenic
ATCACACGAGAAGACGGAAG+AGG	0.585226	3_2:+10016066	None:intergenic
GCCATAGTGAAAGTGAAAGT+AGG	0.587909	3_2:-10015867	Msa0394860:CDS
GCACATCGCGAGCTGAAAGA+GGG	0.588648	3_2:-10015952	Msa0394860:CDS
TGTTTAAACTCCTCCTCAAG+CGG	0.589955	3_2:+10015463	None:intergenic
GCATCCAAGCGTGAGAAGAA+GGG	0.590084	3_2:-10016117	Msa0394860:CDS
ATCTCGGGAGAAGGACGCCA+AGG	0.590489	3_2:-10015161	Msa0394860:CDS
GGTCTAAAATTTCAGGATCA+GGG	0.591143	3_2:-10015930	Msa0394860:CDS
AATACTTCTGGTGGTGCAGT+GGG	0.597159	3_2:-10014953	Msa0394860:CDS
TAAAAGAAATCACCATTCCA+AGG	0.599048	3_2:-10015738	Msa0394860:CDS
TGCGAGGTGGCAAATGGCCA+TGG	0.599400	3_2:-10015500	Msa0394860:CDS
CATCTACTAGATCTTCTGAC+AGG	0.600420	3_2:-10016041	Msa0394860:CDS
ACAATAAAAGACTTAAACGA+AGG	0.601237	3_2:+10014115	None:intergenic
TGTTGGCGATGATCTTTACA+AGG	0.605036	3_2:-10016247	Msa0394860:CDS
TGGGATTGGAGCTGGTATGA+CGG	0.607971	3_2:-10014915	Msa0394860:CDS
GATGACATCACACGAGAAGA+CGG	0.608285	3_2:+10016060	None:intergenic
TTTAAACTCCTCCTCAAGCG+GGG	0.608619	3_2:+10015465	None:intergenic
TGTAATGTTTATTGGGTACG+TGG	0.608871	3_2:-10014250	Msa0394860:three_prime_UTR
GTCTAAAATTTCAGGATCAG+GGG	0.613225	3_2:-10015929	Msa0394860:CDS
TAATACTTCTGGTGGTGCAG+TGG	0.614229	3_2:-10014954	Msa0394860:CDS
GAGTCCCAGAAAACGATGGA+AGG	0.614728	3_2:-10014685	Msa0394860:CDS
TGTGGTTTGCTATATTATCG+TGG	0.615059	3_2:-10014465	Msa0394860:three_prime_UTR
ACACGAGAAGACGGAAGAGG+AGG	0.615894	3_2:+10016069	None:intergenic
GGTAGACACAAGAGCTCCAG+TGG	0.616107	3_2:-10014849	Msa0394860:CDS
AGAAGGACGCCAAGGCTCTG+AGG	0.617944	3_2:-10015153	Msa0394860:CDS
TCTGAATTCTGAAAATTACC+AGG	0.620761	3_2:+10014305	None:intergenic
GCTGAAGAGGCTAGATGTGG+TGG	0.622446	3_2:-10015404	Msa0394860:CDS
AGTGATGATGAATCTGATGT+TGG	0.624462	3_2:-10016264	Msa0394860:CDS
TCTAAAATTTCAGGATCAGG+GGG	0.625310	3_2:-10015928	Msa0394860:CDS
TAAAGCATTGAAAGCAGGGG+AGG	0.625312	3_2:-10015062	Msa0394860:CDS
CATCACTCCTGTCCACCTCA+CGG	0.632979	3_2:+10016280	None:intergenic
GTATTGGCAGGTCAAAGACT+GGG	0.637870	3_2:-10015645	Msa0394860:CDS
CATCAGCTGACATTAACAGT+TGG	0.642633	3_2:-10014659	Msa0394860:CDS
GATGATGACTCTGATGATGA+TGG	0.644756	3_2:-10016312	Msa0394860:CDS
CACATCGCGAGCTGAAAGAG+GGG	0.647083	3_2:-10015951	Msa0394860:CDS
ATGAGACCTCTGCTGCGAGG+TGG	0.647938	3_2:-10015513	Msa0394860:CDS
AAGTAGGTCCCGTAGTGACG+AGG	0.658216	3_2:-10015851	Msa0394860:CDS
TAATAAAGCATTGAAAGCAG+GGG	0.659215	3_2:-10015065	Msa0394860:CDS
ATACAGTCGATTAGGATCCG+AGG	0.660349	3_2:+10015585	None:intergenic
GTGATTACAAGAGAAGAAGA+GGG	0.663120	3_2:-10014637	Msa0394860:CDS
AAGGAAGTAGAGCGAAGTGG+TGG	0.663190	3_2:-10015433	Msa0394860:CDS
TTAAACTCCTCCTCAAGCGG+GGG	0.674132	3_2:+10015466	None:intergenic
GTTAAGGAAGTAGAGCGAAG+TGG	0.674298	3_2:-10015436	Msa0394860:CDS
TTCTAACATCTGCTTCACAG+TGG	0.675939	3_2:+10015333	None:intergenic
TGGTGGTTCTGACCGTGAGG+TGG	0.679830	3_2:-10016292	Msa0394860:CDS
TTTCGAGTCCCAGAAAACGA+TGG	0.687907	3_2:-10014689	Msa0394860:CDS
AAGTACTTGAATGTTGTCTG+GGG	0.689030	3_2:-10015538	Msa0394860:CDS
TTGAGGAGGAGTTTAAACAG+TGG	0.689149	3_2:-10015459	Msa0394860:CDS
TGCCAATATCGCTAGCAATG+TGG	0.691084	3_2:-10014787	Msa0394860:CDS
GCTGGAAATAATACTTCTGG+TGG	0.697224	3_2:-10014962	Msa0394860:CDS
GATGACTCTGATGATGATGG+TGG	0.712456	3_2:-10016309	Msa0394860:CDS
GATGCTGAAGAGGCTAGATG+TGG	0.716515	3_2:-10015407	Msa0394860:CDS
GAAATGAGACCTCTGCTGCG+AGG	0.717415	3_2:-10015516	Msa0394860:CDS
TGATGGTGGTTCTGACCGTG+AGG	0.756865	3_2:-10016295	Msa0394860:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAAATTGATTTTTTGATGA+AGG	+	chr3_2:10015059-10015078	None:intergenic	15.0%
!!!	AAAAATCAATTTTTTGATTC+CGG	-	chr3_2:10015065-10015084	Msa0394860:CDS	15.0%
!!	AAAGAAAAATAAATAAATCC+CGG	+	chr3_2:10017011-10017030	None:intergenic	15.0%
!!	TTCTAATTTGACATTTACTT+AGG	-	chr3_2:10014189-10014208	Msa0394860:three_prime_UTR	20.0%
!!	ACAAATTAGGTTTCAAAAAA+CGG	+	chr3_2:10014886-10014905	None:intergenic	20.0%
!!	AAAACTTACAAAATGGTTTA+TGG	-	chr3_2:10015691-10015710	Msa0394860:CDS	20.0%
!!	AATCTAAACTTTAATGCTAA+GGG	+	chr3_2:10016919-10016938	None:intergenic	20.0%
!!	AAATCTAAACTTTAATGCTA+AGG	+	chr3_2:10016920-10016939	None:intergenic	20.0%
!!!	TTTTATATTCCAAGATATTC+CGG	-	chr3_2:10016989-10017008	Msa0394860:intron	20.0%
!	TTGACATTTACTTAGGTAAT+AGG	-	chr3_2:10014196-10014215	Msa0394860:three_prime_UTR	25.0%
!	TTTACTTAGGTAATAGGTAA+TGG	-	chr3_2:10014202-10014221	Msa0394860:three_prime_UTR	25.0%
!	TTGATAGATATTTCAACCTA+AGG	-	chr3_2:10014232-10014251	Msa0394860:three_prime_UTR	25.0%
!!	TGTCAAAAAAGCAATTTTCA+TGG	-	chr3_2:10014503-10014522	Msa0394860:three_prime_UTR	25.0%
!	GAAAATTCAGAAATTTGAAC+AGG	+	chr3_2:10014775-10014794	None:intergenic	25.0%
!!!	TGATTTTTGTTGTCCAAAAA+CGG	-	chr3_2:10014809-10014828	Msa0394860:CDS	25.0%
!	AACAATGAACACAACAAATT+AGG	+	chr3_2:10014899-10014918	None:intergenic	25.0%
!!	TGATTTAGAAAATGACCTTT+TGG	-	chr3_2:10015001-10015020	Msa0394860:CDS	25.0%
!!!	ATTGATTTTTTGATGAAGGT+GGG	+	chr3_2:10015055-10015074	None:intergenic	25.0%
!!!	AATTGATTTTTTGATGAAGG+TGG	+	chr3_2:10015056-10015075	None:intergenic	25.0%
!	TCTAATTTATACAGTCGATT+AGG	+	chr3_2:10015830-10015849	None:intergenic	25.0%
!!!	TTAATAAAGCATTGAAAGCA+GGG	-	chr3_2:10016338-10016357	Msa0394860:CDS	25.0%
!	GAACTACTATAATTCAAAAC+CGG	-	chr3_2:10016405-10016424	Msa0394860:CDS	25.0%
!	ATCTAAACTTTAATGCTAAG+GGG	+	chr3_2:10016918-10016937	None:intergenic	25.0%
!	AGCATTAAAGTTTAGATTTG+TGG	-	chr3_2:10016921-10016940	Msa0394860:intron	25.0%
!!	GGAATATAAAAGGAATTTTG+TGG	+	chr3_2:10016980-10016999	None:intergenic	25.0%
!	GGAATATCTTGGAATATAAA+AGG	+	chr3_2:10016990-10017009	None:intergenic	25.0%
!	TTTATATTCCAAGATATTCC+GGG	-	chr3_2:10016990-10017009	Msa0394860:intron	25.0%
!!!	TTGAGGCTTTTAAGTTTTAA+AGG	-	chr3_2:10017071-10017090	Msa0394860:intron	25.0%
!	AGTGTCTTTGTAATGTTTAT+TGG	-	chr3_2:10017146-10017165	Msa0394860:intron	25.0%
!	GTGTCTTTGTAATGTTTATT+GGG	-	chr3_2:10017147-10017166	Msa0394860:intron	25.0%
!	AGAAAGAAAAAGATAAACCA+AGG	+	chr3_2:10017259-10017278	None:intergenic	25.0%
!	ACAATAAAAGACTTAAACGA+AGG	+	chr3_2:10017292-10017311	None:intergenic	25.0%
!	ATTTTACATGAACCAAAGTG+TGG	-	chr3_2:10014112-10014131	Msa0394860:three_prime_UTR	30.0%
	GTAGTATAAATACCACACTT+TGG	+	chr3_2:10014127-10014146	None:intergenic	30.0%
!	ATTGAAGTTTGCGTGATTTT+TGG	-	chr3_2:10014322-10014341	Msa0394860:three_prime_UTR	30.0%
	AAATCGACAAAGAGAAGAAA+CGG	-	chr3_2:10014630-10014649	Msa0394860:CDS	30.0%
	GAATACAAGAATACAAGAAC+AGG	+	chr3_2:10014744-10014763	None:intergenic	30.0%
!!!	CTGAATTTTCAAGTCTGTAA+CGG	-	chr3_2:10014785-10014804	Msa0394860:CDS	30.0%
!!!	TGAATTTTCAAGTCTGTAAC+GGG	-	chr3_2:10014786-10014805	Msa0394860:CDS	30.0%
	ATACATTGTGTTATACATGC+AGG	-	chr3_2:10014963-10014982	Msa0394860:CDS	30.0%
!	TTTAGAAAATGACCTTTTGG+AGG	-	chr3_2:10015004-10015023	Msa0394860:CDS	30.0%
!	AGAGATGATTTTGTCTGATA+GGG	-	chr3_2:10015226-10015245	Msa0394860:CDS	30.0%
	AAATTAGGTTTCCCTATTTG+CGG	+	chr3_2:10015506-10015525	None:intergenic	30.0%
!	AAGCTTTGTCTGAAAATGAA+GGG	-	chr3_2:10015582-10015601	Msa0394860:CDS	30.0%
	TAAAAGAAATCACCATTCCA+AGG	-	chr3_2:10015666-10015685	Msa0394860:CDS	30.0%
!!	CATTTTGTAAGTTTTGACCT+TGG	+	chr3_2:10015686-10015705	None:intergenic	30.0%
	CAAGGTCAAAACTTACAAAA+TGG	-	chr3_2:10015684-10015703	Msa0394860:CDS	30.0%
	ACAATCAACTCCTCAAAAAA+GGG	+	chr3_2:10015719-10015738	None:intergenic	30.0%
	AACAATCAACTCCTCAAAAA+AGG	+	chr3_2:10015720-10015739	None:intergenic	30.0%
!!!	TTTTTTGAGGAGTTGATTGT+TGG	-	chr3_2:10015719-10015738	Msa0394860:CDS	30.0%
	AACATTCAAGTACTTGTATG+TGG	+	chr3_2:10015861-10015880	None:intergenic	30.0%
	AAGAGAAAAAATCTATCTCG+CGG	-	chr3_2:10016092-10016111	Msa0394860:CDS	30.0%
!	GCTTTCAATGCTTTATTAAC+TGG	+	chr3_2:10016337-10016356	None:intergenic	30.0%
!!	GTTAATAAAGCATTGAAAGC+AGG	-	chr3_2:10016337-10016356	Msa0394860:CDS	30.0%
!!	TAATAAAGCATTGAAAGCAG+GGG	-	chr3_2:10016339-10016358	Msa0394860:CDS	30.0%
!	TGAAGTGACAATTTTCCTTT+TGG	-	chr3_2:10016806-10016825	Msa0394860:intron	30.0%
	TTGTAATAGAGTTGACCAAA+AGG	+	chr3_2:10016824-10016843	None:intergenic	30.0%
!	TTTTGGTCAACTCTATTACA+AGG	-	chr3_2:10016823-10016842	Msa0394860:intron	30.0%
	AAATAAATCCCGGAATATCT+TGG	+	chr3_2:10017001-10017020	None:intergenic	30.0%
!	TCTGAATTCTGAAAATTACC+AGG	+	chr3_2:10017102-10017121	None:intergenic	30.0%
!	AATTTTCAGAATTCAGATCC+AGG	-	chr3_2:10017105-10017124	Msa0394860:intron	30.0%
!	TACGTGGTACACAATATTTT+AGG	-	chr3_2:10017170-10017189	Msa0394860:intron	30.0%
!	TTTTGAACTTACAACCTTGA+AGG	-	chr3_2:10017212-10017231	Msa0394860:intron	30.0%
	TTTGAACTTACAACCTTGAA+GGG	-	chr3_2:10017213-10017232	Msa0394860:intron	30.0%
	TAAAAGACTTAAACGAAGGA+AGG	+	chr3_2:10017288-10017307	None:intergenic	30.0%
	ATTTCAACCTAAGGAGTAGT+AGG	-	chr3_2:10014241-10014260	Msa0394860:three_prime_UTR	35.0%
!!!	TGCGTGATTTTTGGTTTGAA+TGG	-	chr3_2:10014331-10014350	Msa0394860:three_prime_UTR	35.0%
	GCAACACTGTAAACAGAAAA+TGG	-	chr3_2:10014366-10014385	Msa0394860:three_prime_UTR	35.0%
	ACACTGTAAACAGAAAATGG+AGG	-	chr3_2:10014369-10014388	Msa0394860:three_prime_UTR	35.0%
!!	GGTCATTTTCATGTGTCAAT+TGG	-	chr3_2:10014479-10014498	Msa0394860:three_prime_UTR	35.0%
	GAAATTTGAACAGGAGAAGA+AGG	+	chr3_2:10014766-10014785	None:intergenic	35.0%
	TTAGGTTTCAAAAAACGGAC+CGG	+	chr3_2:10014881-10014900	None:intergenic	35.0%
!	AGTGATGATGAATCTGATGT+TGG	-	chr3_2:10015140-10015159	Msa0394860:CDS	35.0%
!	GAGAGATGATTTTGTCTGAT+AGG	-	chr3_2:10015225-10015244	Msa0394860:CDS	35.0%
!	AAAGAGGGGTCTAAAATTTC+AGG	-	chr3_2:10015467-10015486	Msa0394860:CDS	35.0%
!	GGTCTAAAATTTCAGGATCA+GGG	-	chr3_2:10015474-10015493	Msa0394860:CDS	35.0%
!	GTCTAAAATTTCAGGATCAG+GGG	-	chr3_2:10015475-10015494	Msa0394860:CDS	35.0%
!	TCTAAAATTTCAGGATCAGG+GGG	-	chr3_2:10015476-10015495	Msa0394860:CDS	35.0%
	ACCTACTTTCACTTTCACTA+TGG	+	chr3_2:10015541-10015560	None:intergenic	35.0%
!	GAAGCTTTGTCTGAAAATGA+AGG	-	chr3_2:10015581-10015600	Msa0394860:CDS	35.0%
	ATTTGAAAAGCCATCGTTTG+AGG	-	chr3_2:10015640-10015659	Msa0394860:CDS	35.0%
!	TCTTTTATGTCCTCAAACGA+TGG	+	chr3_2:10015653-10015672	None:intergenic	35.0%
!!	TGTAAGTTTTGACCTTGGAA+TGG	+	chr3_2:10015681-10015700	None:intergenic	35.0%
!	TGATTGTTGGTTGTTTCGTT+AGG	-	chr3_2:10015732-10015751	Msa0394860:CDS	35.0%
!	GATTGTTGGTTGTTTCGTTA+GGG	-	chr3_2:10015733-10015752	Msa0394860:CDS	35.0%
	ACAAGTACTTGAATGTTGTC+TGG	-	chr3_2:10015864-10015883	Msa0394860:CDS	35.0%
	CAAGTACTTGAATGTTGTCT+GGG	-	chr3_2:10015865-10015884	Msa0394860:CDS	35.0%
	AAGTACTTGAATGTTGTCTG+GGG	-	chr3_2:10015866-10015885	Msa0394860:CDS	35.0%
!	TTTCCAATTCCCTTTTCAAC+CGG	+	chr3_2:10016147-10016166	None:intergenic	35.0%
!!	CAGGTTATGATCCTTTTTCA+AGG	-	chr3_2:10016365-10016384	Msa0394860:CDS	35.0%
!!!	ATGATCCTTTTTCAAGGAGA+TGG	-	chr3_2:10016371-10016390	Msa0394860:CDS	35.0%
	CTAGCAATGTGGCAAAAATT+TGG	-	chr3_2:10016628-10016647	Msa0394860:intron	35.0%
	CAGAGAATTGAAGAAGTTGT+TGG	-	chr3_2:10016691-10016710	Msa0394860:intron	35.0%
	GTGATTACAAGAGAAGAAGA+GGG	-	chr3_2:10016767-10016786	Msa0394860:intron	35.0%
	CTCTATTACAAGGCAAAAGT+TGG	-	chr3_2:10016833-10016852	Msa0394860:intron	35.0%
!!	TGTGGTTTGCTATATTATCG+TGG	-	chr3_2:10016939-10016958	Msa0394860:intron	35.0%
!!!	TAAGTTTTAAAGGCTCATCC+TGG	-	chr3_2:10017081-10017100	Msa0394860:intron	35.0%
	AGAATTCAGATCCAGGTTTA+TGG	-	chr3_2:10017112-10017131	Msa0394860:intron	35.0%
	ACGTCTAATTTCCATAAACC+TGG	+	chr3_2:10017126-10017145	None:intergenic	35.0%
	TGTAATGTTTATTGGGTACG+TGG	-	chr3_2:10017154-10017173	Msa0394860:intron	35.0%
	AACCTTGAAGGGTTACAAAT+TGG	-	chr3_2:10017224-10017243	Msa0394860:intron	35.0%
	ATCCAATTTGTAACCCTTCA+AGG	+	chr3_2:10017229-10017248	None:intergenic	35.0%
	AGAAAAAGATAAACCAAGGC+TGG	+	chr3_2:10017255-10017274	None:intergenic	35.0%
	ACCTAAGGAGTAGTAGGTAA+TGG	-	chr3_2:10014247-10014266	Msa0394860:three_prime_UTR	40.0%
	TCCATTACCTACTACTCCTT+AGG	+	chr3_2:10014251-10014270	None:intergenic	40.0%
	TCTTAAGATGCAGAACTCAG+CGG	-	chr3_2:10014401-10014420	Msa0394860:three_prime_UTR	40.0%
	ACAAAATCGCAAAGCGCAAA+CGG	-	chr3_2:10014587-10014606	Msa0394860:three_prime_UTR	40.0%
	ACAAGAACAGGAGAAGAAGA+AGG	+	chr3_2:10014732-10014751	None:intergenic	40.0%
	TTGTTGTCCAAAAACGGTCA+CGG	-	chr3_2:10014815-10014834	Msa0394860:CDS	40.0%
!	CTGCTGATACCGTTTTGTAA+CGG	-	chr3_2:10014841-10014860	Msa0394860:CDS	40.0%
	ACATGCAGGCAGACAAATTA+TGG	-	chr3_2:10014977-10014996	Msa0394860:CDS	40.0%
!	GATGATGACTCTGATGATGA+TGG	-	chr3_2:10015092-10015111	Msa0394860:CDS	40.0%
	TGTTGGCGATGATCTTTACA+AGG	-	chr3_2:10015157-10015176	Msa0394860:CDS	40.0%
	CGATGATCTTTACAAGGATG+AGG	-	chr3_2:10015163-10015182	Msa0394860:CDS	40.0%
	CATCTACTAGATCTTCTGAC+AGG	-	chr3_2:10015363-10015382	Msa0394860:CDS	40.0%
!	GGGTCTAAAATTTCAGGATC+AGG	-	chr3_2:10015473-10015492	Msa0394860:CDS	40.0%
	TGGCTTGAGCTACTGAAATT+AGG	+	chr3_2:10015521-10015540	None:intergenic	40.0%
	GCCATAGTGAAAGTGAAAGT+AGG	-	chr3_2:10015537-10015556	Msa0394860:CDS	40.0%
	GATGATGACAAGATAATGCC+TGG	-	chr3_2:10015617-10015636	Msa0394860:CDS	40.0%
!	AACGATGGCTTTTCAAATCC+AGG	+	chr3_2:10015638-10015657	None:intergenic	40.0%
!!!	GTTTATGGAGCCCTTTTTTG+AGG	-	chr3_2:10015706-10015725	Msa0394860:CDS	40.0%
!!	TGTTTCGTTAGGGTTGGTAT+TGG	-	chr3_2:10015743-10015762	Msa0394860:CDS	40.0%
	GGTGAAAAATGTTGATGCCT+CGG	-	chr3_2:10015802-10015821	Msa0394860:CDS	40.0%
	TGTTTAAACTCCTCCTCAAG+CGG	+	chr3_2:10015944-10015963	None:intergenic	40.0%
	TTGAGGAGGAGTTTAAACAG+TGG	-	chr3_2:10015945-10015964	Msa0394860:CDS	40.0%
	TGAGGAGGAGTTTAAACAGT+GGG	-	chr3_2:10015946-10015965	Msa0394860:CDS	40.0%
!!	GGAGTTTAAACAGTGGGTTA+AGG	-	chr3_2:10015952-10015971	Msa0394860:CDS	40.0%
	TTCTAACATCTGCTTCACAG+TGG	+	chr3_2:10016074-10016093	None:intergenic	40.0%
	AGAAAAAATCTATCTCGCGG+AGG	-	chr3_2:10016095-10016114	Msa0394860:CDS	40.0%
	TTCTCAGCTGCAACATTTAG+TGG	+	chr3_2:10016121-10016140	None:intergenic	40.0%
	TGAGAAGAACCGGTTGAAAA+GGG	-	chr3_2:10016135-10016154	Msa0394860:CDS	40.0%
!!	CCAATTCTTGCAGTTTTGTC+TGG	+	chr3_2:10016210-10016229	None:intergenic	40.0%
	CCAGACAAAACTGCAAGAAT+TGG	-	chr3_2:10016207-10016226	Msa0394860:CDS	40.0%
	GACAAAACTGCAAGAATTGG+AGG	-	chr3_2:10016210-10016229	Msa0394860:CDS	40.0%
	CTGAGATGAACAGAAAGAAC+AGG	-	chr3_2:10016278-10016297	Msa0394860:CDS	40.0%
	CTAGTCCATCTCCTTGAAAA+AGG	+	chr3_2:10016379-10016398	None:intergenic	40.0%
	TAATTCAAAACCGGCTGAAG+AGG	-	chr3_2:10016414-10016433	Msa0394860:CDS	40.0%
	GCAGCTGGAAATAATACTTC+TGG	-	chr3_2:10016439-10016458	Msa0394860:intron	40.0%
	GCTGGAAATAATACTTCTGG+TGG	-	chr3_2:10016442-10016461	Msa0394860:intron	40.0%
	GCAATGTGGCAAAAATTTGG+TGG	-	chr3_2:10016631-10016650	Msa0394860:intron	40.0%
	CATCAGCTGACATTAACAGT+TGG	-	chr3_2:10016745-10016764	Msa0394860:intron	40.0%
	GGTGATTACAAGAGAAGAAG+AGG	-	chr3_2:10016766-10016785	Msa0394860:intron	40.0%
	TCACTGCGAAAGTTAGATTG+AGG	-	chr3_2:10017054-10017073	Msa0394860:intron	40.0%
	GACGGTAGTTAACAATCGCT+GGG	+	chr3_2:10014448-10014467	None:intergenic	45.0%
	TGACGGTAGTTAACAATCGC+TGG	+	chr3_2:10014449-10014468	None:intergenic	45.0%
	AGCGATTGTTAACTACCGTC+AGG	-	chr3_2:10014448-10014467	Msa0394860:three_prime_UTR	45.0%
	GCGATTGTTAACTACCGTCA+GGG	-	chr3_2:10014449-10014468	Msa0394860:three_prime_UTR	45.0%
	CGATTGTTAACTACCGTCAG+GGG	-	chr3_2:10014450-10014469	Msa0394860:three_prime_UTR	45.0%
	AATGACCTTAATGCCCCTGA+CGG	+	chr3_2:10014466-10014485	None:intergenic	45.0%
	TTCAAAAAACGGACCGGTAC+CGG	+	chr3_2:10014875-10014894	None:intergenic	45.0%
	TTATACCAGCAGCCTCCAAA+AGG	+	chr3_2:10015019-10015038	None:intergenic	45.0%
	ATCAGAGTCATCATCGTCTC+CGG	+	chr3_2:10015087-10015106	None:intergenic	45.0%
!!	GATGACTCTGATGATGATGG+TGG	-	chr3_2:10015095-10015114	Msa0394860:CDS	45.0%
	ATTTCCCTTCTTCTCACGCT+TGG	+	chr3_2:10015294-10015313	None:intergenic	45.0%
	GATGACATCACACGAGAAGA+CGG	+	chr3_2:10015347-10015366	None:intergenic	45.0%
	TGAATGAACTGCGTGCTAAG+AGG	-	chr3_2:10015408-10015427	Msa0394860:CDS	45.0%
	TTCAACATCCTCGTCACTAC+GGG	+	chr3_2:10015564-10015583	None:intergenic	45.0%
	CTTCAACATCCTCGTCACTA+CGG	+	chr3_2:10015565-10015584	None:intergenic	45.0%
!	GTTGGTTGTTTCGTTAGGGT+TGG	-	chr3_2:10015737-10015756	Msa0394860:CDS	45.0%
!	GTATTGGCAGGTCAAAGACT+GGG	-	chr3_2:10015759-10015778	Msa0394860:CDS	45.0%
	ACCATACAGAGCCTGTAGAT+AGG	+	chr3_2:10015785-10015804	None:intergenic	45.0%
	ATACAGTCGATTAGGATCCG+AGG	+	chr3_2:10015822-10015841	None:intergenic	45.0%
	TTTAAACTCCTCCTCAAGCG+GGG	+	chr3_2:10015942-10015961	None:intergenic	45.0%
	GTTTAAACTCCTCCTCAAGC+GGG	+	chr3_2:10015943-10015962	None:intergenic	45.0%
	GTTAAGGAAGTAGAGCGAAG+TGG	-	chr3_2:10015968-10015987	Msa0394860:CDS	45.0%
	ATGTTGCAGCTGAGAAGAAC+CGG	-	chr3_2:10016125-10016144	Msa0394860:CDS	45.0%
	CTGAGAAGAACCGGTTGAAA+AGG	-	chr3_2:10016134-10016153	Msa0394860:CDS	45.0%
	GAACCGGTTGAAAAGGGAAT+TGG	-	chr3_2:10016141-10016160	Msa0394860:CDS	45.0%
	TGTCTGGATCTTCTCTACTC+CGG	+	chr3_2:10016194-10016213	None:intergenic	45.0%
	TGCAAGAATTGGAGGAATCC+CGG	-	chr3_2:10016218-10016237	Msa0394860:CDS	45.0%
!!	TAAAGCATTGAAAGCAGGGG+AGG	-	chr3_2:10016342-10016361	Msa0394860:CDS	45.0%
!!	CAAGGAGATGGACTAGATCA+AGG	-	chr3_2:10016383-10016402	Msa0394860:CDS	45.0%
!	TAATACTTCTGGTGGTGCAG+TGG	-	chr3_2:10016450-10016469	Msa0394860:intron	45.0%
!	AATACTTCTGGTGGTGCAGT+GGG	-	chr3_2:10016451-10016470	Msa0394860:intron	45.0%
	TGCCAATATCGCTAGCAATG+TGG	-	chr3_2:10016617-10016636	Msa0394860:intron	45.0%
	TGCCACATTGCTAGCGATAT+TGG	+	chr3_2:10016622-10016641	None:intergenic	45.0%
!	CAAAAATTTGGTGGAGCGCA+GGG	-	chr3_2:10016640-10016659	Msa0394860:intron	45.0%
!	TTTCGAGTCCCAGAAAACGA+TGG	-	chr3_2:10016715-10016734	Msa0394860:intron	45.0%
!	GACTCCTTCCATCGTTTTCT+GGG	+	chr3_2:10016726-10016745	None:intergenic	45.0%
!	TGACTCCTTCCATCGTTTTC+TGG	+	chr3_2:10016727-10016746	None:intergenic	45.0%
	CAAATTGGATCAACCAGCCT+TGG	-	chr3_2:10017239-10017258	Msa0394860:intron	45.0%
!!	ATAATATATTATAACATATT+TGG	-	chr3_2:10014284-10014303	Msa0394860:three_prime_UTR	5.0%
!!	AACTACCGTCAGGGGCATTA+AGG	-	chr3_2:10014458-10014477	Msa0394860:three_prime_UTR	50.0%
	GAGAATCGCAAATCGCAAGC+AGG	-	chr3_2:10014659-10014678	Msa0394860:CDS	50.0%
	GGATTGCGGCCGTTACAAAA+CGG	+	chr3_2:10014853-10014872	None:intergenic	50.0%
!	TTTTGTAACGGCCGCAATCC+CGG	-	chr3_2:10014853-10014872	Msa0394860:CDS	50.0%
	TCAAAAAACGGACCGGTACC+GGG	+	chr3_2:10014874-10014893	None:intergenic	50.0%
!!	AATGACCTTTTGGAGGCTGC+TGG	-	chr3_2:10015011-10015030	Msa0394860:CDS	50.0%
	GTCTGATAGGGCTGCTAAGA+AGG	-	chr3_2:10015238-10015257	Msa0394860:CDS	50.0%
	CTCACGCTTGGATGCTATCT+TGG	+	chr3_2:10015282-10015301	None:intergenic	50.0%
	AGCATCCAAGCGTGAGAAGA+AGG	-	chr3_2:10015286-10015305	Msa0394860:CDS	50.0%
	GCATCCAAGCGTGAGAAGAA+GGG	-	chr3_2:10015287-10015306	Msa0394860:CDS	50.0%
	ATCACACGAGAAGACGGAAG+AGG	+	chr3_2:10015341-10015360	None:intergenic	50.0%
	TTCTGACAGGTCAGCTGCTA+AGG	-	chr3_2:10015376-10015395	Msa0394860:CDS	50.0%
!	TCAGGGGGTTTTCCGCAAAT+AGG	-	chr3_2:10015491-10015510	Msa0394860:CDS	50.0%
!	CAGGGGGTTTTCCGCAAATA+GGG	-	chr3_2:10015492-10015511	Msa0394860:CDS	50.0%
!!	TCGTTAGGGTTGGTATTGGC+AGG	-	chr3_2:10015747-10015766	Msa0394860:CDS	50.0%
!!	GGTATTGGCAGGTCAAAGAC+TGG	-	chr3_2:10015758-10015777	Msa0394860:CDS	50.0%
	CAAAGACTGGGCCTATCTAC+AGG	-	chr3_2:10015771-10015790	Msa0394860:CDS	50.0%
	GCCTATCTACAGGCTCTGTA+TGG	-	chr3_2:10015781-10015800	Msa0394860:CDS	50.0%
	TTAAACTCCTCCTCAAGCGG+GGG	+	chr3_2:10015941-10015960	None:intergenic	50.0%
	AAGGAAGTAGAGCGAAGTGG+TGG	-	chr3_2:10015971-10015990	Msa0394860:CDS	50.0%
	CATCTAGCCTCTTCAGCATC+CGG	+	chr3_2:10015997-10016016	None:intergenic	50.0%
	GATGCTGAAGAGGCTAGATG+TGG	-	chr3_2:10015997-10016016	Msa0394860:CDS	50.0%
	GAAAGCAAGAACGATGCAGC+CGG	-	chr3_2:10016172-10016191	Msa0394860:CDS	50.0%
	TGGAGGAATCCCGGAAATCT+CGG	-	chr3_2:10016227-10016246	Msa0394860:CDS	50.0%
	TGGGATTGGAGCTGGTATGA+CGG	-	chr3_2:10016489-10016508	Msa0394860:intron	50.0%
	ACAAGAGCTCCAGTGGATGA+AGG	-	chr3_2:10016562-10016581	Msa0394860:intron	50.0%
	GACTCTGTTCCTTCATCCAC+TGG	+	chr3_2:10016574-10016593	None:intergenic	50.0%
!	GCAAAAATTTGGTGGAGCGC+AGG	-	chr3_2:10016639-10016658	Msa0394860:intron	50.0%
	GAGTCCCAGAAAACGATGGA+AGG	-	chr3_2:10016719-10016738	Msa0394860:intron	50.0%
	CAGCGGTTGTTAACAACCGC+TGG	-	chr3_2:10014418-10014437	Msa0394860:three_prime_UTR	55.0%
	AAGCGCAAACGGTAAGCAGC+AGG	-	chr3_2:10014598-10014617	Msa0394860:three_prime_UTR	55.0%
!	GCAGTCACCGTGACCGTTTT+TGG	+	chr3_2:10014825-10014844	None:intergenic	55.0%
!!	TGATGGTGGTTCTGACCGTG+AGG	-	chr3_2:10015109-10015128	Msa0394860:CDS	55.0%
	CATCACTCCTGTCCACCTCA+CGG	+	chr3_2:10015127-10015146	None:intergenic	55.0%
	ACACGAGAAGACGGAAGAGG+AGG	+	chr3_2:10015338-10015357	None:intergenic	55.0%
	GACAGGTCAGCTGCTAAGGA+TGG	-	chr3_2:10015380-10015399	Msa0394860:CDS	55.0%
	TTCAGCTCGCGATGTGCTTC+CGG	+	chr3_2:10015449-10015468	None:intergenic	55.0%
	AGCACATCGCGAGCTGAAAG+AGG	-	chr3_2:10015451-10015470	Msa0394860:CDS	55.0%
	GCACATCGCGAGCTGAAAGA+GGG	-	chr3_2:10015452-10015471	Msa0394860:CDS	55.0%
	CACATCGCGAGCTGAAAGAG+GGG	-	chr3_2:10015453-10015472	Msa0394860:CDS	55.0%
	AAGTAGGTCCCGTAGTGACG+AGG	-	chr3_2:10015553-10015572	Msa0394860:CDS	55.0%
	GAAATGAGACCTCTGCTGCG+AGG	-	chr3_2:10015888-10015907	Msa0394860:CDS	55.0%
	AAGTAGAGCGAAGTGGTGGC+CGG	-	chr3_2:10015975-10015994	Msa0394860:CDS	55.0%
	GCTGAAGAGGCTAGATGTGG+TGG	-	chr3_2:10016000-10016019	Msa0394860:CDS	55.0%
	GGAGGAATCCCGGAAATCTC+GGG	-	chr3_2:10016228-10016247	Msa0394860:CDS	55.0%
	ATCCCGGAAATCTCGGGAGA+AGG	-	chr3_2:10016234-10016253	Msa0394860:CDS	55.0%
	GTCCTTCTCCCGAGATTTCC+GGG	+	chr3_2:10016239-10016258	None:intergenic	55.0%
	CGTCCTTCTCCCGAGATTTC+CGG	+	chr3_2:10016240-10016259	None:intergenic	55.0%
	CTCAGAAAGCCTCAGAGCCT+TGG	+	chr3_2:10016263-10016282	None:intergenic	55.0%
!!	TGGGTGATGGAGGCAGCAAT+GGG	-	chr3_2:10016470-10016489	Msa0394860:intron	55.0%
	GATGGAGGCAGCAATGGGAT+TGG	-	chr3_2:10016475-10016494	Msa0394860:intron	55.0%
	AGCAGCAGCTTCCAAAGCCT+CGG	+	chr3_2:10016521-10016540	None:intergenic	55.0%
!	TGCTGCTGGTGCTGGAAAGT+TGG	-	chr3_2:10016534-10016553	Msa0394860:intron	55.0%
	GGTAGACACAAGAGCTCCAG+TGG	-	chr3_2:10016555-10016574	Msa0394860:intron	55.0%
	GGGAGTTCAGGCAGGGTTTA+TGG	-	chr3_2:10016660-10016679	Msa0394860:intron	55.0%
!!	ACAATCGCTGGGAGTGCCAG+CGG	+	chr3_2:10014437-10014456	None:intergenic	60.0%
!!	TGGTGGTTCTGACCGTGAGG+TGG	-	chr3_2:10015112-10015131	Msa0394860:CDS	60.0%
	GTTCTGACCGTGAGGTGGAC+AGG	-	chr3_2:10015117-10015136	Msa0394860:CDS	60.0%
	CGAGAAGACGGAAGAGGAGG+CGG	+	chr3_2:10015335-10015354	None:intergenic	60.0%
	GAGGCTGAAACAGCGAGAGC+CGG	-	chr3_2:10015427-10015446	Msa0394860:CDS	60.0%
	ATGAGACCTCTGCTGCGAGG+TGG	-	chr3_2:10015891-10015910	Msa0394860:CDS	60.0%
	CATTTGCCACCTCGCAGCAG+AGG	+	chr3_2:10015900-10015919	None:intergenic	60.0%
	CTCTGCTGCGAGGTGGCAAA+TGG	-	chr3_2:10015898-10015917	Msa0394860:CDS	60.0%
	TGCGAGGTGGCAAATGGCCA+TGG	-	chr3_2:10015904-10015923	Msa0394860:CDS	60.0%
	CGGGGGAGAATCGCTAACCA+TGG	+	chr3_2:10015924-10015943	None:intergenic	60.0%
	TAGCGATTCTCCCCCGCTTG+AGG	-	chr3_2:10015928-10015947	Msa0394860:CDS	60.0%
	ATCTCGGGAGAAGGACGCCA+AGG	-	chr3_2:10016243-10016262	Msa0394860:CDS	60.0%
	AGAAGGACGCCAAGGCTCTG+AGG	-	chr3_2:10016251-10016270	Msa0394860:CDS	60.0%
	GCATTGAAAGCAGGGGAGGC+AGG	-	chr3_2:10016346-10016365	Msa0394860:CDS	60.0%
!	TCTGGTGGTGCAGTGGGTGA+TGG	-	chr3_2:10016457-10016476	Msa0394860:intron	60.0%
!!	GTGGGTGATGGAGGCAGCAA+TGG	-	chr3_2:10016469-10016488	Msa0394860:intron	60.0%
	GGCAGCAATGGGATTGGAGC+TGG	-	chr3_2:10016481-10016500	Msa0394860:intron	60.0%
	AGCTTCCAAAGCCTCGGCAG+TGG	+	chr3_2:10016515-10016534	None:intergenic	60.0%
!!	GAGGCTTTGGAAGCTGCTGC+TGG	-	chr3_2:10016520-10016539	Msa0394860:intron	60.0%
	TTGGAAGCTGCTGCTGGTGC+TGG	-	chr3_2:10016526-10016545	Msa0394860:intron	60.0%
	AACGGCCGCAATCCCGGTAC+CGG	-	chr3_2:10014859-10014878	Msa0394860:CDS	65.0%
!	ACGGACCGGTACCGGGATTG+CGG	+	chr3_2:10014867-10014886	None:intergenic	65.0%
	CGATTCTCCCCCGCTTGAGG+AGG	-	chr3_2:10015931-10015950	Msa0394860:CDS	65.0%
	GTGGTGGCCGGATGCTGAAG+AGG	-	chr3_2:10015987-10016006	Msa0394860:CDS	65.0%
	CCAGCTGCAGCCTCTTCAGC+CGG	+	chr3_2:10016427-10016446	None:intergenic	65.0%
!	GGTGGTGCAGTGGGTGATGG+AGG	-	chr3_2:10016460-10016479	Msa0394860:intron	65.0%
	TGGTATGACGGCCACTGCCG+AGG	-	chr3_2:10016501-10016520	Msa0394860:intron	65.0%
	TGGTGGAGCGCAGGGAGTTC+AGG	-	chr3_2:10016648-10016667	Msa0394860:intron	65.0%
	GAGCGCAGGGAGTTCAGGCA+GGG	-	chr3_2:10016653-10016672	Msa0394860:intron	65.0%
	CCGGCTGAAGAGGCTGCAGC+TGG	-	chr3_2:10016424-10016443	Msa0394860:intron	70.0%
	GACGGCCACTGCCGAGGCTT+TGG	-	chr3_2:10016507-10016526	Msa0394860:intron	70.0%
	GGAGCGCAGGGAGTTCAGGC+AGG	-	chr3_2:10016652-10016671	Msa0394860:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_2	gene	10014104	10017322	10014104	ID=Msa0394860;Name=Msa0394860
chr3_2	mRNA	10014104	10017322	10014104	ID=Msa0394860-mRNA-1;Parent=Msa0394860;Name=Msa0394860-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0\|0\|0.33\|0.33\|1\|1\|3\|524\|608
chr3_2	exon	10014104	10016441	10014104	ID=Msa0394860-mRNA-1:exon:2623;Parent=Msa0394860-mRNA-1
chr3_2	exon	10017209	10017215	10017209	ID=Msa0394860-mRNA-1:exon:2622;Parent=Msa0394860-mRNA-1
chr3_2	exon	10017317	10017322	10017317	ID=Msa0394860-mRNA-1:exon:2621;Parent=Msa0394860-mRNA-1
chr3_2	CDS	10017317	10017322	10017317	ID=Msa0394860-mRNA-1:cds;Parent=Msa0394860-mRNA-1
chr3_2	CDS	10017209	10017215	10017209	ID=Msa0394860-mRNA-1:cds;Parent=Msa0394860-mRNA-1
chr3_2	CDS	10014628	10016441	10014628	ID=Msa0394860-mRNA-1:cds;Parent=Msa0394860-mRNA-1
chr3_2	three_prime_UTR	10014104	10014627	10014104	ID=Msa0394860-mRNA-1:three_prime_utr;Parent=Msa0394860-mRNA-1

Gene Sequence

>Msa0394860

ATGGGTGTAATAGGCAGACAAATTATGGCTGATTTAGAAAATGACCTTTTGGAGGCTGCTGGTATAAACAAACATTCTCTCCCACCTTCATCAAAAAATCAATTTTTTGATTCCGGAGACGATGATGACTCTGATGATGATGGTGGTTCTGACCGTGAGGTGGACAGGAGTGATGATGAATCTGATGTTGGCGATGATCTTTACAAGGATGAGGATGACAGAAAGAAACTTTCTGAGATGACTGAACTTCAAAGAGAGATGATTTTGTCTGATAGGGCTGCTAAGAAGGATGATAAAGATATTTTGTCCAAGATAGCATCCAAGCGTGAGAAGAAGGGAAATGTATCGAGAAGAGAGACTCCGCCTCCTCTTCCGTCTTCTCGTGTGATGTCATCTACTAGATCTTCTGACAGGTCAGCTGCTAAGGATGGTGCATTGAATGAACTGCGTGCTAAGAGGCTGAAACAGCGAGAGCCGGAAGCACATCGCGAGCTGAAAGAGGGGTCTAAAATTTCAGGATCAGGGGGTTTTCCGCAAATAGGGAAACCTAATTTCAGTAGCTCAAGCCATAGTGAAAGTGAAAGTAGGTCCCGTAGTGACGAGGATGTTGAAGCTTTGTCTGAAAATGAAGGGATTATTGACAGCGATGATGACAAGATAATGCCTGGATTTGAAAAGCCATCGTTTGAGGACATAAAAGAAATCACCATTCCAAGGTCAAAACTTACAAAATGGTTTATGGAGCCCTTTTTTGAGGAGTTGATTGTTGGTTGTTTCGTTAGGGTTGGTATTGGCAGGTCAAAGACTGGGCCTATCTACAGGCTCTGTATGGTGAAAAATGTTGATGCCTCGGATCCTAATCGACTGTATAAATTAGATAATAAAACCACATACAAGTACTTGAATGTTGTCTGGGGAAATGAGACCTCTGCTGCGAGGTGGCAAATGGCCATGGTTAGCGATTCTCCCCCGCTTGAGGAGGAGTTTAAACAGTGGGTTAAGGAAGTAGAGCGAAGTGGTGGCCGGATGCTGAAGAGGCTAGATGTGGTGGAAAAAAAGCAAGACATGCAGAAGATTAATAATTTTGTTTACTCAGCAGCCACTGTGAAGCAGATGTTAGAAGAGAAAAAATCTATCTCGCGGAGGCCACTAAATGTTGCAGCTGAGAAGAACCGGTTGAAAAGGGAATTGGAAATCGCAGAAAGCAAGAACGATGCAGCCGGAGTAGAGAAGATCCAGACAAAACTGCAAGAATTGGAGGAATCCCGGAAATCTCGGGAGAAGGACGCCAAGGCTCTGAGGCTTTCTGAGATGAACAGAAAGAACAGGTTTGAGAACTTCATAAATGCTTCTGATTTAAAGCCAGTTAATAAAGCATTGAAAGCAGGGGAGGCAGGTTATGATCCTTTTTCAAGGAGATGGACTAGATCAAGGAACTACTATAATTCAAAACCGGCTGAAGAGGCTGCAGCTGGAAATAATACTTCTGGTGGTGCAGTGGGTGATGGAGGCAGCAATGGGATTGGAGCTGGTATGACGGCCACTGCCGAGGCTTTGGAAGCTGCTGCTGGTGCTGGAAAGTTGGTAGACACAAGAGCTCCAGTGGATGAAGGAACAGAGTCAAATGTACTGCATGATTTTGAGTTGCCAATATCGCTAGCAATGTGGCAAAAATTTGGTGGAGCGCAGGGAGTTCAGGCAGGGTTTATGGCAAAAAAACAGAGAATTGAAGAAGTTGTTGGATTTCGAGTCCCAGAAAACGATGGAAGGAGTCATCAGCTGACATTAACAGTTGGTGATTACAAGAGAAGAAGAGGGCTTCTTTGA

Protein sequence

>Msa0394860

MGVIGRQIMADLENDLLEAAGINKHSLPPSSKNQFFDSGDDDDSDDDGGSDREVDRSDDESDVGDDLYKDEDDRKKLSEMTELQREMILSDRAAKKDDKDILSKIASKREKKGNVSRRETPPPLPSSRVMSSTRSSDRSAAKDGALNELRAKRLKQREPEAHRELKEGSKISGSGGFPQIGKPNFSSSSHSESESRSRSDEDVEALSENEGIIDSDDDKIMPGFEKPSFEDIKEITIPRSKLTKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPNRLYKLDNKTTYKYLNVVWGNETSAARWQMAMVSDSPPLEEEFKQWVKEVERSGGRMLKRLDVVEKKQDMQKINNFVYSAATVKQMLEEKKSISRRPLNVAAEKNRLKRELEIAESKNDAAGVEKIQTKLQELEESRKSREKDAKALRLSEMNRKNRFENFINASDLKPVNKALKAGEAGYDPFSRRWTRSRNYYNSKPAEEAAAGNNTSGGAVGDGGSNGIGAGMTATAEALEAAAGAGKLVDTRAPVDEGTESNVLHDFELPISLAMWQKFGGAQGVQAGFMAKKQRIEEVVGFRVPENDGRSHQLTLTVGDYKRRRGLL*