AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0861540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861540 MtrunA17_Chr5g0395271 98.137 322 6 0 1 322 1 322 0.0 646
Msa0861540 MtrunA17_Chr3g0126971 78.333 60 13 0 263 322 6 65 8.28e-27 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861540 AT1G65020.1 64.630 311 107 2 1 311 1 308 1.45e-144 410

Find 88 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGAGTTCCTTGAATTTA+AGG 0.162942 5_4:+60891033 Msa0861540:CDS
GTCCAAACATGCTTGTCTTT+TGG 0.226912 5_4:-60891120 None:intergenic
TCCTTAGCACAGCTCCGATA+TGG 0.248467 5_4:+60889566 Msa0861540:CDS
TTACACGATCATACTATAAT+AGG 0.251088 5_4:+60892003 Msa0861540:three_prime_UTR
CCATACTTAACACACTGATT+TGG 0.254435 5_4:+60887370 Msa0861540:five_prime_UTR
TACTTCCAAATCCTAAATTA+TGG 0.275004 5_4:+60888932 Msa0861540:CDS
AAGTACTGAGATCATCTTTC+AGG 0.289690 5_4:+60891781 Msa0861540:CDS
ACATACCATAATTTAGGATT+TGG 0.298779 5_4:-60888937 None:intergenic
CCAAATCAGTGTGTTAAGTA+TGG 0.301994 5_4:-60887370 None:intergenic
CATACTTAACACACTGATTT+GGG 0.302393 5_4:+60887371 Msa0861540:five_prime_UTR
GAAGTATAACTTTACAAGTT+AGG 0.321243 5_4:-60888915 None:intergenic
GGTTTGGTTGGTTGGTTGGT+TGG 0.329327 5_4:+60887392 Msa0861540:five_prime_UTR
CTCTGGTGCTGATGCTCCCT+TGG 0.331844 5_4:-60891735 None:intergenic
AAAGCAGCTATAAGTCTTGC+TGG 0.347631 5_4:+60892049 Msa0861540:three_prime_UTR
GAGAGCACACTCTTTGTTCC+GGG 0.351339 5_4:-60889469 None:intergenic
TTACAAGTTAGGAATCCTTT+AGG 0.352898 5_4:-60888904 None:intergenic
TAGAGTCATTATCAGTTATC+AGG 0.352933 5_4:-60892093 None:intergenic
TTCTCTTCTCCGTAGCTAAC+AGG 0.353170 5_4:+60887569 Msa0861540:CDS
ATCCAAAAGACAAGCATGTT+TGG 0.358398 5_4:+60891118 Msa0861540:CDS
TTTGGGTTTGGTTGGTTGGT+TGG 0.360382 5_4:+60887388 Msa0861540:five_prime_UTR
AGAGAGCACACTCTTTGTTC+CGG 0.360940 5_4:-60889470 None:intergenic
CCTCCTTGCCCTTAAATTCA+AGG 0.368520 5_4:-60891042 None:intergenic
AAGAGGTTCCTTACAGGATC+AGG 0.374138 5_4:-60888562 None:intergenic
GGAGAGTTCCTTGAATTTAA+GGG 0.377759 5_4:+60891034 Msa0861540:CDS
CTGATTTGGGTTTGGTTGGT+TGG 0.380300 5_4:+60887384 Msa0861540:five_prime_UTR
TCAGTTGCACCAACTGTTCA+TGG 0.383310 5_4:-60889444 None:intergenic
TTAACACACTGATTTGGGTT+TGG 0.397142 5_4:+60887376 Msa0861540:five_prime_UTR
CAAAGAGTGTGCTCTCTAGC+TGG 0.413619 5_4:+60889476 Msa0861540:CDS
AAAGGCAGCAAGTATGTATT+GGG 0.428495 5_4:+60891013 Msa0861540:CDS
GTAAAGAATACCTTTCTTAG+TGG 0.432856 5_4:+60889499 Msa0861540:CDS
CACACTGATTTGGGTTTGGT+TGG 0.436509 5_4:+60887380 Msa0861540:five_prime_UTR
GAAAGGCAGCAAGTATGTAT+TGG 0.437053 5_4:+60891012 Msa0861540:CDS
TGGTTGGTTGGTTGGTTGCA+AGG 0.441495 5_4:+60887400 Msa0861540:five_prime_UTR
CAGAGAGCTACTAGTGATAT+CGG 0.442531 5_4:+60888453 Msa0861540:intron
CAGTTCAAGGGGATGGTAGT+TGG 0.442677 5_4:+60888500 Msa0861540:CDS
ATCTTGTTCTCCTCACTAAA+CGG 0.444438 5_4:+60887795 Msa0861540:CDS
TACAAAACTTGAAGCGTAGA+AGG 0.445109 5_4:-60891692 None:intergenic
AGTTCAAGGGGATGGTAGTT+GGG 0.450991 5_4:+60888501 Msa0861540:CDS
AGAGGAGTTGTTCTACCTAA+AGG 0.458571 5_4:+60888889 Msa0861540:CDS
CCTTAGCACAGCTCCGATAT+GGG 0.458981 5_4:+60889567 Msa0861540:CDS
AACTCCTCTTTGTTCAAGAT+AGG 0.470713 5_4:-60888875 None:intergenic
TGAATTTAAGGGCAAGGAGG+GGG 0.482520 5_4:+60891045 Msa0861540:CDS
ATCATTCTTCCCACTAAGAA+AGG 0.488207 5_4:-60889509 None:intergenic
ATGGAATCGAATGGAATGTA+AGG 0.492653 5_4:-60887351 None:intergenic
CTTGAATTTAAGGGCAAGGA+GGG 0.496833 5_4:+60891043 Msa0861540:CDS
AGTGAGGAGAACAAGATCAA+TGG 0.509852 5_4:-60887789 None:intergenic
TCATGGGTAATAACTTCAGA+TGG 0.517850 5_4:-60889427 None:intergenic
TAAAGAATACCTTTCTTAGT+GGG 0.519984 5_4:+60889500 Msa0861540:CDS
GATATCGGTGAAGAACTTCT+CGG 0.527229 5_4:+60888468 Msa0861540:CDS
TTGAATTTAAGGGCAAGGAG+GGG 0.528134 5_4:+60891044 Msa0861540:CDS
CTCCCTTGGTTCTGTAGTCA+CGG 0.532065 5_4:-60891721 None:intergenic
GGTGAAGCAGAATCAGCATC+AGG 0.532372 5_4:-60887761 None:intergenic
GTTCCTTGAATTTAAGGGCA+AGG 0.535185 5_4:+60891039 Msa0861540:CDS
GTAACTAACCTATCCCATAT+CGG 0.537606 5_4:-60889580 None:intergenic
GTTGGAAGAAGTAAGAAAGC+AGG 0.540992 5_4:+60888837 Msa0861540:intron
ACGGTCACTTCGTTCCACTC+TGG 0.541796 5_4:-60891752 None:intergenic
TGGGAAATCACTAGCAGGAA+TGG 0.544917 5_4:-60889407 None:intergenic
CATATTAGAAGATCAAAAGT+TGG 0.546113 5_4:+60891085 Msa0861540:CDS
ATATCGGTGAAGAACTTCTC+GGG 0.548520 5_4:+60888469 Msa0861540:CDS
AAGACAAGCATGTTTGGACT+AGG 0.550639 5_4:+60891124 Msa0861540:CDS
CAGTTGGTGCAACTGAAGCC+CGG 0.558138 5_4:+60889451 Msa0861540:CDS
ATTTGCAAGATTTGAAGATG+TGG 0.558251 5_4:+60887452 Msa0861540:exon
CAGTTGCACCAACTGTTCAT+GGG 0.560744 5_4:-60889443 None:intergenic
AAAGAGTGTGCTCTCTAGCT+GGG 0.564254 5_4:+60889477 Msa0861540:CDS
CCCATATCGGAGCTGTGCTA+AGG 0.568778 5_4:-60889567 None:intergenic
ATCAAACCACAGATAATCGC+AGG 0.569955 5_4:-60887475 None:intergenic
AAAATAGAACCTGTTAGCTA+CGG 0.572491 5_4:-60887578 None:intergenic
TCAGATGGGAAATCACTAGC+AGG 0.572671 5_4:-60889412 None:intergenic
ACATACAAAATACTATTATG+TGG 0.573344 5_4:+60891928 Msa0861540:three_prime_UTR
AGAACAAGATCAATGGTTTG+AGG 0.575518 5_4:-60887782 None:intergenic
AGTTGGGCCTGTGAAAAGCC+AGG 0.575563 5_4:+60888517 Msa0861540:CDS
AGAGGTTCCTTACAGGATCA+GGG 0.579456 5_4:-60888561 None:intergenic
CCTTGAATTTAAGGGCAAGG+AGG 0.585033 5_4:+60891042 Msa0861540:CDS
GCACAGCTCCGATATGGGAT+AGG 0.585641 5_4:+60889572 Msa0861540:CDS
AGTTATTACCCATGAACAGT+TGG 0.586406 5_4:+60889435 Msa0861540:CDS
TCCTTACAGGATCAGGGTGA+CGG 0.588996 5_4:-60888555 None:intergenic
GCTTGCAGGTTGGAACTGAA+AGG 0.595661 5_4:+60890995 Msa0861540:intron
CATGGGTAATAACTTCAGAT+GGG 0.605648 5_4:-60889426 None:intergenic
TTCCGTGACTACAGAACCAA+GGG 0.621677 5_4:+60891719 Msa0861540:CDS
ATGTGGCCTGCGATTATCTG+TGG 0.622381 5_4:+60887469 Msa0861540:CDS
TTTGTTCAAGATAGGACTCG+AGG 0.627057 5_4:-60888867 None:intergenic
GTGTTAAGTATGGAATCGAA+TGG 0.632183 5_4:-60887360 None:intergenic
ATAACTGATAATGACTCTAG+TGG 0.646482 5_4:+60892097 Msa0861540:three_prime_UTR
GAGTCCTATCTTGAACAAAG+AGG 0.656933 5_4:+60888871 Msa0861540:CDS
AGTCATTATCAGTTATCAGG+TGG 0.661246 5_4:-60892090 None:intergenic
TTTCCGTGACTACAGAACCA+AGG 0.679639 5_4:+60891718 Msa0861540:CDS
AGGGAGCATCAGCACCAGAG+TGG 0.687214 5_4:+60891738 Msa0861540:CDS
AGCTACGGAGAAGAGAACAG+TGG 0.755552 5_4:-60887563 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTTTTTTAAAATTACAT+CGG + chr5_4:60887924-60887943 Msa0861540:intron 10.0%
!!! ATGGTTTTTTTTTTTTTTTT+TGG + chr5_4:60888635-60888654 Msa0861540:intron 10.0%
!!! TGGTTTTTTTTTTTTTTTTT+GGG + chr5_4:60888636-60888655 Msa0861540:intron 10.0%
!! CTATAATAACAAAATTTAAT+GGG + chr5_4:60891194-60891213 Msa0861540:intron 10.0%
!! AAAATAATTGAAATCATGAA+AGG - chr5_4:60887625-60887644 None:intergenic 15.0%
!! ATTGCATTCAAATTATAATA+AGG + chr5_4:60888059-60888078 Msa0861540:intron 15.0%
!! TTGCATTCAAATTATAATAA+GGG + chr5_4:60888060-60888079 Msa0861540:intron 15.0%
!!! ACTTTAAAATTTTCCAAATT+TGG + chr5_4:60889073-60889092 Msa0861540:intron 15.0%
!! AAGAACTAATTAAAAAAGAA+TGG - chr5_4:60889136-60889155 None:intergenic 15.0%
!!! ATTCTTTTTTAATTAGTTCT+TGG + chr5_4:60889135-60889154 Msa0861540:intron 15.0%
!! AAATAATATTGATGTTTCAT+TGG - chr5_4:60890384-60890403 None:intergenic 15.0%
!! TAAATAGTTAAGTGTATAAT+AGG - chr5_4:60890409-60890428 None:intergenic 15.0%
!!! TTTTCAATAACATTAATGAA+GGG + chr5_4:60890462-60890481 Msa0861540:intron 15.0%
!!! ATAACTCAATTCTTTAATTT+CGG + chr5_4:60890497-60890516 Msa0861540:intron 15.0%
!!! TATTTAATATGACCAAATTT+TGG + chr5_4:60890947-60890966 Msa0861540:intron 15.0%
!! GCTATAATAACAAAATTTAA+TGG + chr5_4:60891193-60891212 Msa0861540:intron 15.0%
!! AGTATTAAATAAAACATTGA+GGG - chr5_4:60891279-60891298 None:intergenic 15.0%
!! TAGTATTAAATAAAACATTG+AGG - chr5_4:60891280-60891299 None:intergenic 15.0%
!!! AAAAATAATACCTTTTAGTG+AGG - chr5_4:60887982-60888001 None:intergenic 20.0%
!!! TTTTTTTACTCTTCTGATTA+GGG + chr5_4:60888323-60888342 Msa0861540:intron 20.0%
!! GTTAATGAATGATAAATTTG+TGG + chr5_4:60888381-60888400 Msa0861540:intron 20.0%
!! ACATTCATAATTTATTCAAG+AGG - chr5_4:60888582-60888601 None:intergenic 20.0%
!!! TGTTTGTTAAATCATATGAA+CGG + chr5_4:60888696-60888715 Msa0861540:intron 20.0%
!! TATGAAAGAAGTTACTAATT+TGG - chr5_4:60888793-60888812 None:intergenic 20.0%
!! TCAAAAACATACCATAATTT+AGG - chr5_4:60888946-60888965 None:intergenic 20.0%
!!! AATGGATTATACATATGAAT+AGG - chr5_4:60889118-60889137 None:intergenic 20.0%
!! ATTACTGTCTAAACTATAAT+TGG + chr5_4:60889175-60889194 Msa0861540:intron 20.0%
!!! GAATTGTGTTGTTAATAAAT+TGG + chr5_4:60889197-60889216 Msa0861540:intron 20.0%
!!! TTATGATGTAAAAAAAGCAT+TGG + chr5_4:60889272-60889291 Msa0861540:intron 20.0%
!! ATTAGAAAGATAAGAACAAA+GGG - chr5_4:60889605-60889624 None:intergenic 20.0%
!! ATCTTATTCAAACATAGATT+AGG - chr5_4:60889962-60889981 None:intergenic 20.0%
!!! TTTTTCCTTTTTCATATTGT+TGG + chr5_4:60890198-60890217 Msa0861540:intron 20.0%
!! TTTAACCAACAATATGAAAA+AGG - chr5_4:60890206-60890225 None:intergenic 20.0%
!!! TTTTTCATATTGTTGGTTAA+AGG + chr5_4:60890205-60890224 Msa0861540:intron 20.0%
!!! TTTTCATATTGTTGGTTAAA+GGG + chr5_4:60890206-60890225 Msa0861540:intron 20.0%
!!! TAGTACTATTGATTACTAAA+AGG + chr5_4:60890280-60890299 Msa0861540:intron 20.0%
!!! GTTTTCAATAACATTAATGA+AGG + chr5_4:60890461-60890480 Msa0861540:intron 20.0%
!! TCTATTATATAACTTAGAGA+AGG - chr5_4:60891461-60891480 None:intergenic 20.0%
!!! ATAATAGTATTTTGTATGTC+TGG - chr5_4:60891927-60891946 None:intergenic 20.0%
!! ACATACAAAATACTATTATG+TGG + chr5_4:60891928-60891947 Msa0861540:three_prime_UTR 20.0%
! TTGCAAATGAAATGCAAAAA+TGG - chr5_4:60887440-60887459 None:intergenic 25.0%
! GTTACATTGAATTGAATTGA+AGG + chr5_4:60887654-60887673 Msa0861540:intron 25.0%
!!! CATTTTTCTTTTTTTGTTGC+AGG + chr5_4:60887693-60887712 Msa0861540:intron 25.0%
! AAAAATAATACCGTTTAGTG+AGG - chr5_4:60887808-60887827 None:intergenic 25.0%
! ACTAACAAAAAAGAGAAACA+TGG - chr5_4:60888198-60888217 None:intergenic 25.0%
!!! GTTTCTCTTTTTTGTTAGTT+CGG + chr5_4:60888199-60888218 Msa0861540:intron 25.0%
!! ATTTTGTAAAAGCTACACTT+TGG - chr5_4:60888253-60888272 None:intergenic 25.0%
!!! GTTTTTTTACTCTTCTGATT+AGG + chr5_4:60888322-60888341 Msa0861540:intron 25.0%
!!! TTTTTTACTCTTCTGATTAG+GGG + chr5_4:60888324-60888343 Msa0861540:intron 25.0%
!!! TAGATTTTAGAAACTGCTTT+TGG + chr5_4:60888672-60888691 Msa0861540:intron 25.0%
! CATAACAAAATAGGAACAAA+AGG - chr5_4:60888734-60888753 None:intergenic 25.0%
!!! TTTGTTCCTATTTTGTTATG+AGG + chr5_4:60888734-60888753 Msa0861540:intron 25.0%
! GAAGTATAACTTTACAAGTT+AGG - chr5_4:60888918-60888937 None:intergenic 25.0%
! TACTTCCAAATCCTAAATTA+TGG + chr5_4:60888932-60888951 Msa0861540:CDS 25.0%
!! ACATACCATAATTTAGGATT+TGG - chr5_4:60888940-60888959 None:intergenic 25.0%
! AAAATAATCAAACCGTGTAT+TGG - chr5_4:60889046-60889065 None:intergenic 25.0%
! TAAAGAATACCTTTCTTAGT+GGG + chr5_4:60889500-60889519 Msa0861540:CDS 25.0%
! CATTAGAAAGATAAGAACAA+AGG - chr5_4:60889606-60889625 None:intergenic 25.0%
! AAACTTTCTGCAATCATATT+TGG + chr5_4:60889642-60889661 Msa0861540:intron 25.0%
! TTGTATTTAGATGCTGTTAA+TGG + chr5_4:60889671-60889690 Msa0861540:intron 25.0%
! ATCAATCCATTTCTGAATAT+TGG + chr5_4:60889730-60889749 Msa0861540:intron 25.0%
!! ATCTATATTTGAGACAGAAT+TGG - chr5_4:60889839-60889858 None:intergenic 25.0%
!! AACATTTGAGATGCATTATA+GGG - chr5_4:60889882-60889901 None:intergenic 25.0%
!! AAACATTTGAGATGCATTAT+AGG - chr5_4:60889883-60889902 None:intergenic 25.0%
! GATTAGGAATACTAGTAATT+AGG - chr5_4:60889946-60889965 None:intergenic 25.0%
!!! AGGTATTTAACTTGAGATTA+GGG - chr5_4:60890045-60890064 None:intergenic 25.0%
!!! TAGGTATTTAACTTGAGATT+AGG - chr5_4:60890046-60890065 None:intergenic 25.0%
!! TCTAGTTTCATTGTTTATCT+AGG - chr5_4:60890065-60890084 None:intergenic 25.0%
!! AAAAAGTACGATTTGTGTAT+TGG - chr5_4:60890092-60890111 None:intergenic 25.0%
!!! ACACAAATCGTACTTTTTAT+TGG + chr5_4:60890094-60890113 Msa0861540:intron 25.0%
!!! CACAAATCGTACTTTTTATT+GGG + chr5_4:60890095-60890114 Msa0861540:intron 25.0%
!!! ACAAATCGTACTTTTTATTG+GGG + chr5_4:60890096-60890115 Msa0861540:intron 25.0%
!! TTTCATATTGTTGGTTAAAG+GGG + chr5_4:60890207-60890226 Msa0861540:intron 25.0%
! ATTACATAGCAAATGTTGAT+AGG + chr5_4:60890230-60890249 Msa0861540:intron 25.0%
! CTCAAAGCAACTTAAAATTT+GGG - chr5_4:60890321-60890340 None:intergenic 25.0%
! TCTCAAAGCAACTTAAAATT+TGG - chr5_4:60890322-60890341 None:intergenic 25.0%
! TGTAAAGTGACTTACAATTT+GGG - chr5_4:60890358-60890377 None:intergenic 25.0%
! TTGTAAAGTGACTTACAATT+TGG - chr5_4:60890359-60890378 None:intergenic 25.0%
! ATTTCTTAATCTGTGTGAAA+TGG + chr5_4:60890535-60890554 Msa0861540:intron 25.0%
!! AAATTAAGAATTGCTCTAAG+AGG - chr5_4:60890644-60890663 None:intergenic 25.0%
!! TGCTTAGATATTTTCCTATT+TGG + chr5_4:60890852-60890871 Msa0861540:intron 25.0%
!! GCTTAGATATTTTCCTATTT+GGG + chr5_4:60890853-60890872 Msa0861540:intron 25.0%
! GTGAGTAAAAAACCAAAATT+TGG - chr5_4:60890962-60890981 None:intergenic 25.0%
! CATATTAGAAGATCAAAAGT+TGG + chr5_4:60891085-60891104 Msa0861540:CDS 25.0%
! TTGAAGTTGAAACAAAGATT+TGG + chr5_4:60891231-60891250 Msa0861540:intron 25.0%
! AATATCTGTTGTAACCAAAA+TGG - chr5_4:60891355-60891374 None:intergenic 25.0%
!! ATTTTATAGAAAAGAGTCAC+AGG - chr5_4:60891557-60891576 None:intergenic 25.0%
! TTAGACAATAATAACATTGC+TGG - chr5_4:60891630-60891649 None:intergenic 25.0%
! TGATGTTTCTTTAACTAACA+TGG + chr5_4:60891655-60891674 Msa0861540:intron 25.0%
! GATGTTTCTTTAACTAACAT+GGG + chr5_4:60891656-60891675 Msa0861540:intron 25.0%
!! TATTTTGTATGTCTGGAAAA+GGG - chr5_4:60891920-60891939 None:intergenic 25.0%
! TTACACGATCATACTATAAT+AGG + chr5_4:60892003-60892022 Msa0861540:three_prime_UTR 25.0%
!!! TAGTTTTTTGTTTCAACTCT+TGG + chr5_4:60892137-60892156 Msa0861540:three_prime_UTR 25.0%
!! CATACTTAACACACTGATTT+GGG + chr5_4:60887371-60887390 Msa0861540:five_prime_UTR 30.0%
ATTTGCAAGATTTGAAGATG+TGG + chr5_4:60887452-60887471 Msa0861540:exon 30.0%
AAAATAGAACCTGTTAGCTA+CGG - chr5_4:60887581-60887600 None:intergenic 30.0%
GAAAGGATTCAATTCAACAA+CGG - chr5_4:60887608-60887627 None:intergenic 30.0%
!!! TCCAGTGTTTTTTGAGATTA+AGG + chr5_4:60888104-60888123 Msa0861540:intron 30.0%
ACCTTAATCTCAAAAAACAC+TGG - chr5_4:60888108-60888127 None:intergenic 30.0%
! GTGTAGCTTTTACAAAATCA+TGG + chr5_4:60888255-60888274 Msa0861540:intron 30.0%
TTAACTAGCAATTGTAACTG+AGG - chr5_4:60888366-60888385 None:intergenic 30.0%
ATACAGCCTCATAACAAAAT+AGG - chr5_4:60888743-60888762 None:intergenic 30.0%
!! TTTTGTTATGAGGCTGTATT+AGG + chr5_4:60888744-60888763 Msa0861540:intron 30.0%
TTTCTCAACTTGTATACAGT+TGG + chr5_4:60888819-60888838 Msa0861540:intron 30.0%
TTACAAGTTAGGAATCCTTT+AGG - chr5_4:60888907-60888926 None:intergenic 30.0%
CAGCAAGTACTTATATTTCA+AGG - chr5_4:60888973-60888992 None:intergenic 30.0%
! ATTCATGATTTGCCAATACA+CGG + chr5_4:60889031-60889050 Msa0861540:intron 30.0%
! TTCCAAATTTGGCTTCATAT+AGG + chr5_4:60889084-60889103 Msa0861540:intron 30.0%
TCATAAATACTGCTTGTCAA+TGG - chr5_4:60889258-60889277 None:intergenic 30.0%
! TTACTCAGTTTTCTTTTGAC+TGG - chr5_4:60889312-60889331 None:intergenic 30.0%
GTAAAGAATACCTTTCTTAG+TGG + chr5_4:60889499-60889518 Msa0861540:CDS 30.0%
ATCCATTTCTGAATATTGGT+AGG + chr5_4:60889734-60889753 Msa0861540:intron 30.0%
ATCCTACCAATATTCAGAAA+TGG - chr5_4:60889739-60889758 None:intergenic 30.0%
TTCTGAATATTGGTAGGATA+AGG + chr5_4:60889740-60889759 Msa0861540:intron 30.0%
TACAATCTCAGAACTCTATT+TGG + chr5_4:60889777-60889796 Msa0861540:intron 30.0%
! TATATTTGAGACAGAATTGG+AGG - chr5_4:60889836-60889855 None:intergenic 30.0%
! TTATAGGGTTTTCATTCAGT+CGG - chr5_4:60889867-60889886 None:intergenic 30.0%
ATACTAGTAATTAGGATGTC+TGG - chr5_4:60889938-60889957 None:intergenic 30.0%
! TTTTTATTGGGGAAATACCT+TGG + chr5_4:60890107-60890126 Msa0861540:intron 30.0%
! AACTTAAAATTTGGGATGGA+GGG - chr5_4:60890313-60890332 None:intergenic 30.0%
AAGCAACTTAAAATTTGGGA+TGG - chr5_4:60890317-60890336 None:intergenic 30.0%
! GGTCAAAATGACTTGTAATT+CGG + chr5_4:60890556-60890575 Msa0861540:intron 30.0%
! GTCAAAATGACTTGTAATTC+GGG + chr5_4:60890557-60890576 Msa0861540:intron 30.0%
CATTCTGTTATAAAAGGATG+TGG - chr5_4:60890726-60890745 None:intergenic 30.0%
TTTACTCACAACAGATTGTT+TGG + chr5_4:60890973-60890992 Msa0861540:intron 30.0%
! TGGTTTTTGCCACTAATTAA+GGG - chr5_4:60891312-60891331 None:intergenic 30.0%
! ATGGTTTTTGCCACTAATTA+AGG - chr5_4:60891313-60891332 None:intergenic 30.0%
ATCAAGATCTGATTAGACTA+TGG - chr5_4:60891332-60891351 None:intergenic 30.0%
! AATCAGATCTTGATCCATTT+TGG + chr5_4:60891338-60891357 Msa0861540:intron 30.0%
AATGTTCTGATTCTTGATCT+TGG - chr5_4:60891488-60891507 None:intergenic 30.0%
AGAATCAGAACATTCAACAT+TGG + chr5_4:60891494-60891513 Msa0861540:intron 30.0%
CATAAGACAGAGGTAATTAT+CGG - chr5_4:60891591-60891610 None:intergenic 30.0%
! GATCTCAGTACTTGATTTTA+CGG - chr5_4:60891774-60891793 None:intergenic 30.0%
! CAGCTTAAACTTTTTGATCT+TGG - chr5_4:60891819-60891838 None:intergenic 30.0%
! GTATTTTGTATGTCTGGAAA+AGG - chr5_4:60891921-60891940 None:intergenic 30.0%
TAGAGTCATTATCAGTTATC+AGG - chr5_4:60892096-60892115 None:intergenic 30.0%
! ATAACTGATAATGACTCTAG+TGG + chr5_4:60892097-60892116 Msa0861540:three_prime_UTR 30.0%
ATGGAATCGAATGGAATGTA+AGG - chr5_4:60887354-60887373 None:intergenic 35.0%
GTGTTAAGTATGGAATCGAA+TGG - chr5_4:60887363-60887382 None:intergenic 35.0%
CCAAATCAGTGTGTTAAGTA+TGG - chr5_4:60887373-60887392 None:intergenic 35.0%
! CCATACTTAACACACTGATT+TGG + chr5_4:60887370-60887389 Msa0861540:five_prime_UTR 35.0%
!! TTAACACACTGATTTGGGTT+TGG + chr5_4:60887376-60887395 Msa0861540:five_prime_UTR 35.0%
! TTTTGGTGGAAAGGTTTTTG+TGG + chr5_4:60887727-60887746 Msa0861540:CDS 35.0%
! TTTGGTGGAAAGGTTTTTGT+GGG + chr5_4:60887728-60887747 Msa0861540:CDS 35.0%
AGAACAAGATCAATGGTTTG+AGG - chr5_4:60887785-60887804 None:intergenic 35.0%
ATCTTGTTCTCCTCACTAAA+CGG + chr5_4:60887795-60887814 Msa0861540:CDS 35.0%
TTCTATCAGAAGTGAAGTGT+CGG - chr5_4:60887848-60887867 None:intergenic 35.0%
TTATCTCTTTCCAACACTTC+TGG + chr5_4:60888001-60888020 Msa0861540:intron 35.0%
TACATGTGTCTAGACACTAA+CGG - chr5_4:60888039-60888058 None:intergenic 35.0%
TAGCAATTGTAACTGAGGAT+TGG - chr5_4:60888361-60888380 None:intergenic 35.0%
TTATTCAAGAGGTTCCTTAC+AGG - chr5_4:60888571-60888590 None:intergenic 35.0%
!! ATACTGTTTTATTGCTGCGA+TGG + chr5_4:60888616-60888635 Msa0861540:intron 35.0%
TATTAGGTGTGGAAGGAAAT+GGG + chr5_4:60888760-60888779 Msa0861540:intron 35.0%
AACTCCTCTTTGTTCAAGAT+AGG - chr5_4:60888878-60888897 None:intergenic 35.0%
GACCTATATGAAGCCAAATT+TGG - chr5_4:60889089-60889108 None:intergenic 35.0%
!! AAAAAAAGCATTGGTCCATC+TGG + chr5_4:60889281-60889300 Msa0861540:intron 35.0%
!! TTTTGACTGGATAAACCAGA+TGG - chr5_4:60889299-60889318 None:intergenic 35.0%
CATGGGTAATAACTTCAGAT+GGG - chr5_4:60889429-60889448 None:intergenic 35.0%
TCATGGGTAATAACTTCAGA+TGG - chr5_4:60889430-60889449 None:intergenic 35.0%
AGTTATTACCCATGAACAGT+TGG + chr5_4:60889435-60889454 Msa0861540:CDS 35.0%
ATCATTCTTCCCACTAAGAA+AGG - chr5_4:60889512-60889531 None:intergenic 35.0%
GTAACTAACCTATCCCATAT+CGG - chr5_4:60889583-60889602 None:intergenic 35.0%
! CTTGACAACACTTTTGCTTA+GGG + chr5_4:60889697-60889716 Msa0861540:intron 35.0%
! TTGACAACACTTTTGCTTAG+GGG + chr5_4:60889698-60889717 Msa0861540:intron 35.0%
! AACTTGAGATTAGGGTTTTC+TGG - chr5_4:60890037-60890056 None:intergenic 35.0%
! CTTGGCAAAAGGAACATTTT+GGG + chr5_4:60890125-60890144 Msa0861540:intron 35.0%
! TTGGCAAAAGGAACATTTTG+GGG + chr5_4:60890126-60890145 Msa0861540:intron 35.0%
! CAACTTAAAATTTGGGATGG+AGG - chr5_4:60890314-60890333 None:intergenic 35.0%
!! AAGAATTGCTCTAAGAGGTT+GGG - chr5_4:60890639-60890658 None:intergenic 35.0%
!! TAAGAATTGCTCTAAGAGGT+TGG - chr5_4:60890640-60890659 None:intergenic 35.0%
GCGACACATTCTGTTATAAA+AGG - chr5_4:60890732-60890751 None:intergenic 35.0%
AACATTGCACCCTACATAAT+AGG + chr5_4:60890819-60890838 Msa0861540:intron 35.0%
ACTTTGGATCAGTGTACTAT+CGG + chr5_4:60890910-60890929 Msa0861540:intron 35.0%
GTGTACTATCGGATAATTGT+TGG + chr5_4:60890921-60890940 Msa0861540:intron 35.0%
AAAGGCAGCAAGTATGTATT+GGG + chr5_4:60891013-60891032 Msa0861540:CDS 35.0%
GGAGAGTTCCTTGAATTTAA+GGG + chr5_4:60891034-60891053 Msa0861540:CDS 35.0%
ATCCAAAAGACAAGCATGTT+TGG + chr5_4:60891118-60891137 Msa0861540:CDS 35.0%
CAACCAAATCCCTTAATTAG+TGG + chr5_4:60891300-60891319 Msa0861540:intron 35.0%
TTGCCACTAATTAAGGGATT+TGG - chr5_4:60891306-60891325 None:intergenic 35.0%
!! AACATTCAACATTGGCTCTA+CGG + chr5_4:60891502-60891521 Msa0861540:intron 35.0%
CGATAATTACCTCTGTCTTA+TGG + chr5_4:60891589-60891608 Msa0861540:intron 35.0%
TACAAAACTTGAAGCGTAGA+AGG - chr5_4:60891695-60891714 None:intergenic 35.0%
!! AAGTACTGAGATCATCTTTC+AGG + chr5_4:60891781-60891800 Msa0861540:CDS 35.0%
AGTCATTATCAGTTATCAGG+TGG - chr5_4:60892093-60892112 None:intergenic 35.0%
ATCAAACCACAGATAATCGC+AGG - chr5_4:60887478-60887497 None:intergenic 40.0%
! CTTTTATGACGACGACGTTT+TGG + chr5_4:60887522-60887541 Msa0861540:CDS 40.0%
!! TCAGAAGCTTTTTGGTGGAA+AGG + chr5_4:60887718-60887737 Msa0861540:CDS 40.0%
AGTGAGGAGAACAAGATCAA+TGG - chr5_4:60887792-60887811 None:intergenic 40.0%
TGTGTATCATGTGTCGTGTT+TGG - chr5_4:60887884-60887903 None:intergenic 40.0%
! CCTTTTAGTGAGGAGAACAT+CGG - chr5_4:60887972-60887991 None:intergenic 40.0%
TTTCCAACACTTCTGGTAGA+AGG + chr5_4:60888008-60888027 Msa0861540:intron 40.0%
CAGAGAGCTACTAGTGATAT+CGG + chr5_4:60888453-60888472 Msa0861540:intron 40.0%
GATATCGGTGAAGAACTTCT+CGG + chr5_4:60888468-60888487 Msa0861540:CDS 40.0%
ATATCGGTGAAGAACTTCTC+GGG + chr5_4:60888469-60888488 Msa0861540:CDS 40.0%
!! TCGGGAATTTTGACAGTTCA+AGG + chr5_4:60888487-60888506 Msa0861540:CDS 40.0%
!! CGGGAATTTTGACAGTTCAA+GGG + chr5_4:60888488-60888507 Msa0861540:CDS 40.0%
!! GGGAATTTTGACAGTTCAAG+GGG + chr5_4:60888489-60888508 Msa0861540:CDS 40.0%
!! ATTTTGACAGTTCAAGGGGA+TGG + chr5_4:60888493-60888512 Msa0861540:CDS 40.0%
!! ATGTTTTCCTGGCTTTTCAC+AGG - chr5_4:60888527-60888546 None:intergenic 40.0%
! CGGTCAACTTTATGTTTTCC+TGG - chr5_4:60888538-60888557 None:intergenic 40.0%
TTATGAGGCTGTATTAGGTG+TGG + chr5_4:60888749-60888768 Msa0861540:intron 40.0%
GTATTAGGTGTGGAAGGAAA+TGG + chr5_4:60888759-60888778 Msa0861540:intron 40.0%
GTTGGAAGAAGTAAGAAAGC+AGG + chr5_4:60888837-60888856 Msa0861540:intron 40.0%
TTTGTTCAAGATAGGACTCG+AGG - chr5_4:60888870-60888889 None:intergenic 40.0%
GAGTCCTATCTTGAACAAAG+AGG + chr5_4:60888871-60888890 Msa0861540:CDS 40.0%
AGAGGAGTTGTTCTACCTAA+AGG + chr5_4:60888889-60888908 Msa0861540:CDS 40.0%
GGAATGGTACTGCAAATACA+AGG - chr5_4:60889394-60889413 None:intergenic 40.0%
!! CCTAAGCAAAAGTGTTGTCA+AGG - chr5_4:60889699-60889718 None:intergenic 40.0%
! CCTTGACAACACTTTTGCTT+AGG + chr5_4:60889696-60889715 Msa0861540:intron 40.0%
CTCAGAACTCTATTTGGAGA+AGG + chr5_4:60889783-60889802 Msa0861540:intron 40.0%
ATTTGGAGAAGGCTCGATAA+CGG + chr5_4:60889794-60889813 Msa0861540:intron 40.0%
! CCAAAATGTTCCTTTTGCCA+AGG - chr5_4:60890127-60890146 None:intergenic 40.0%
! CCTTGGCAAAAGGAACATTT+TGG + chr5_4:60890124-60890143 Msa0861540:intron 40.0%
! TTTGGGGTTATCTGTTGTAC+AGG + chr5_4:60890142-60890161 Msa0861540:intron 40.0%
TTGGGGTTATCTGTTGTACA+GGG + chr5_4:60890143-60890162 Msa0861540:intron 40.0%
AATTCGGGATGATAAATCCC+TGG + chr5_4:60890572-60890591 Msa0861540:intron 40.0%
GATGATAAATCCCTGGTTTC+CGG + chr5_4:60890579-60890598 Msa0861540:intron 40.0%
GGAAAACTATCTCTTCTCAG+AGG - chr5_4:60890611-60890630 None:intergenic 40.0%
ATGTAGAAAAATGAGCGCGA+AGG - chr5_4:60890793-60890812 None:intergenic 40.0%
CAAAGTCAAGCAGATGTGTT+AGG - chr5_4:60890896-60890915 None:intergenic 40.0%
CTAACACATCTGCTTGACTT+TGG + chr5_4:60890894-60890913 Msa0861540:intron 40.0%
GAAAGGCAGCAAGTATGTAT+TGG + chr5_4:60891012-60891031 Msa0861540:CDS 40.0%
GGGAGAGTTCCTTGAATTTA+AGG + chr5_4:60891033-60891052 Msa0861540:CDS 40.0%
GTTCCTTGAATTTAAGGGCA+AGG + chr5_4:60891039-60891058 Msa0861540:CDS 40.0%
CTTGAATTTAAGGGCAAGGA+GGG + chr5_4:60891043-60891062 Msa0861540:CDS 40.0%
TTGAATTTAAGGGCAAGGAG+GGG + chr5_4:60891044-60891063 Msa0861540:CDS 40.0%
! GTCCAAACATGCTTGTCTTT+TGG - chr5_4:60891123-60891142 None:intergenic 40.0%
AAGACAAGCATGTTTGGACT+AGG + chr5_4:60891124-60891143 Msa0861540:CDS 40.0%
CCTTATCTTCCATAAGACAG+AGG - chr5_4:60891601-60891620 None:intergenic 40.0%
CCTCTGTCTTATGGAAGATA+AGG + chr5_4:60891598-60891617 Msa0861540:intron 40.0%
AAAGCAGCTATAAGTCTTGC+TGG + chr5_4:60892049-60892068 Msa0861540:three_prime_UTR 40.0%
!! CACACTGATTTGGGTTTGGT+TGG + chr5_4:60887380-60887399 Msa0861540:five_prime_UTR 45.0%
!! CTGATTTGGGTTTGGTTGGT+TGG + chr5_4:60887384-60887403 Msa0861540:five_prime_UTR 45.0%
! TTTGGGTTTGGTTGGTTGGT+TGG + chr5_4:60887388-60887407 Msa0861540:five_prime_UTR 45.0%
TTCTCTTCTCCGTAGCTAAC+AGG + chr5_4:60887569-60887588 Msa0861540:CDS 45.0%
! TGCAGGCTTCAGAAGCTTTT+TGG + chr5_4:60887710-60887729 Msa0861540:intron 45.0%
! AGGCTTCAGAAGCTTTTTGG+TGG + chr5_4:60887713-60887732 Msa0861540:intron 45.0%
CCGATGTTCTCCTCACTAAA+AGG + chr5_4:60887969-60887988 Msa0861540:intron 45.0%
! ACACCTTCTACCAGAAGTGT+TGG - chr5_4:60888014-60888033 None:intergenic 45.0%
AGTTCAAGGGGATGGTAGTT+GGG + chr5_4:60888501-60888520 Msa0861540:CDS 45.0%
AGAGGTTCCTTACAGGATCA+GGG - chr5_4:60888564-60888583 None:intergenic 45.0%
AAGAGGTTCCTTACAGGATC+AGG - chr5_4:60888565-60888584 None:intergenic 45.0%
TGGGAAATCACTAGCAGGAA+TGG - chr5_4:60889410-60889429 None:intergenic 45.0%
TCAGATGGGAAATCACTAGC+AGG - chr5_4:60889415-60889434 None:intergenic 45.0%
CAGTTGCACCAACTGTTCAT+GGG - chr5_4:60889446-60889465 None:intergenic 45.0%
TCAGTTGCACCAACTGTTCA+TGG - chr5_4:60889447-60889466 None:intergenic 45.0%
! AGAGAGCACACTCTTTGTTC+CGG - chr5_4:60889473-60889492 None:intergenic 45.0%
! AAAGAGTGTGCTCTCTAGCT+GGG + chr5_4:60889477-60889496 Msa0861540:CDS 45.0%
GCTTTGCTGGGTCTATAAGT+AGG - chr5_4:60889916-60889935 None:intergenic 45.0%
!! TTAGGATGTCTGGCTTTGCT+GGG - chr5_4:60889928-60889947 None:intergenic 45.0%
!! ATTAGGATGTCTGGCTTTGC+TGG - chr5_4:60889929-60889948 None:intergenic 45.0%
TGGGGAAATACCTTGGCAAA+AGG + chr5_4:60890114-60890133 Msa0861540:intron 45.0%
TGCACCCTACATAATAGGCT+CGG + chr5_4:60890824-60890843 Msa0861540:intron 45.0%
TTGCCCGAGCCTATTATGTA+GGG - chr5_4:60890831-60890850 None:intergenic 45.0%
!! CAACAGATTGTTTGGCTTGC+AGG + chr5_4:60890981-60891000 Msa0861540:intron 45.0%
!! AGATTGTTTGGCTTGCAGGT+TGG + chr5_4:60890985-60891004 Msa0861540:intron 45.0%
CCTCCTTGCCCTTAAATTCA+AGG - chr5_4:60891045-60891064 None:intergenic 45.0%
CCTTGAATTTAAGGGCAAGG+AGG + chr5_4:60891042-60891061 Msa0861540:CDS 45.0%
TGAATTTAAGGGCAAGGAGG+GGG + chr5_4:60891045-60891064 Msa0861540:CDS 45.0%
TTTCCGTGACTACAGAACCA+AGG + chr5_4:60891718-60891737 Msa0861540:CDS 45.0%
TTCCGTGACTACAGAACCAA+GGG + chr5_4:60891719-60891738 Msa0861540:CDS 45.0%
! GGTTTGGTTGGTTGGTTGGT+TGG + chr5_4:60887392-60887411 Msa0861540:five_prime_UTR 50.0%
! TGGTTGGTTGGTTGGTTGCA+AGG + chr5_4:60887400-60887419 Msa0861540:five_prime_UTR 50.0%
ATGTGGCCTGCGATTATCTG+TGG + chr5_4:60887469-60887488 Msa0861540:CDS 50.0%
AGCTACGGAGAAGAGAACAG+TGG - chr5_4:60887566-60887585 None:intergenic 50.0%
GGTGAAGCAGAATCAGCATC+AGG - chr5_4:60887764-60887783 None:intergenic 50.0%
CAGTTCAAGGGGATGGTAGT+TGG + chr5_4:60888500-60888519 Msa0861540:CDS 50.0%
TCCTTACAGGATCAGGGTGA+CGG - chr5_4:60888558-60888577 None:intergenic 50.0%
GAGGCTGTATTAGGTGTGGA+AGG + chr5_4:60888753-60888772 Msa0861540:intron 50.0%
! GAGAGCACACTCTTTGTTCC+GGG - chr5_4:60889472-60889491 None:intergenic 50.0%
! CAAAGAGTGTGCTCTCTAGC+TGG + chr5_4:60889476-60889495 Msa0861540:CDS 50.0%
TCCTTAGCACAGCTCCGATA+TGG + chr5_4:60889566-60889585 Msa0861540:CDS 50.0%
CCTTAGCACAGCTCCGATAT+GGG + chr5_4:60889567-60889586 Msa0861540:CDS 50.0%
CTCTTCTCAGAGGATTGCTC+CGG - chr5_4:60890601-60890620 None:intergenic 50.0%
TGCGACGTGGTAGAGAATGA+AGG - chr5_4:60890768-60890787 None:intergenic 50.0%
GCACCCTACATAATAGGCTC+GGG + chr5_4:60890825-60890844 Msa0861540:intron 50.0%
GTTGCCCGAGCCTATTATGT+AGG - chr5_4:60890832-60890851 None:intergenic 50.0%
GGATGAGTGTGGACCCAAAT+AGG - chr5_4:60890869-60890888 None:intergenic 50.0%
ATTTGGGTCCACACTCATCC+AGG + chr5_4:60890869-60890888 Msa0861540:intron 50.0%
TGTTAGGACCTGGATGAGTG+TGG - chr5_4:60890880-60890899 None:intergenic 50.0%
CAAGCAGATGTGTTAGGACC+TGG - chr5_4:60890890-60890909 None:intergenic 50.0%
! GCTTGCAGGTTGGAACTGAA+AGG + chr5_4:60890995-60891014 Msa0861540:intron 50.0%
!! CTCCCTTGGTTCTGTAGTCA+CGG - chr5_4:60891724-60891743 None:intergenic 50.0%
AGTTGGGCCTGTGAAAAGCC+AGG + chr5_4:60888517-60888536 Msa0861540:CDS 55.0%
ACCGTCACCCTGATCCTGTA+AGG + chr5_4:60888554-60888573 Msa0861540:intron 55.0%
! CAGTTGGTGCAACTGAAGCC+CGG + chr5_4:60889451-60889470 Msa0861540:CDS 55.0%
CCCATATCGGAGCTGTGCTA+AGG - chr5_4:60889570-60889589 None:intergenic 55.0%
GCACAGCTCCGATATGGGAT+AGG + chr5_4:60889572-60889591 Msa0861540:CDS 55.0%
GAGGATTGCTCCGGAAACCA+GGG - chr5_4:60890592-60890611 None:intergenic 55.0%
AGAGGATTGCTCCGGAAACC+AGG - chr5_4:60890593-60890612 None:intergenic 55.0%
!! GCTCTAAGAGGTTGGGCAGA+GGG - chr5_4:60890632-60890651 None:intergenic 55.0%
!! TGCTCTAAGAGGTTGGGCAG+AGG - chr5_4:60890633-60890652 None:intergenic 55.0%
ACGGTCACTTCGTTCCACTC+TGG - chr5_4:60891755-60891774 None:intergenic 55.0%
!! CTCTGGTGCTGATGCTCCCT+TGG - chr5_4:60891738-60891757 None:intergenic 60.0%
!! AGGGAGCATCAGCACCAGAG+TGG + chr5_4:60891738-60891757 Msa0861540:CDS 60.0%
GAGCGCGAAGGAATGCGACG+TGG - chr5_4:60890781-60890800 None:intergenic 65.0%
GGGCAAGGAGGGGGATGTTG+AGG + chr5_4:60891054-60891073 Msa0861540:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 60887338 60892164 60887338 ID=Msa0861540;Name=Msa0861540
chr5_4 mRNA 60887338 60892164 60887338 ID=Msa0861540-mRNA-1;Parent=Msa0861540;Name=Msa0861540-mRNA-1;_AED=0.10;_eAED=0.10;_QI=131|1|1|1|1|1|7|293|322
chr5_4 exon 60887338 60887590 60887338 ID=Msa0861540-mRNA-1:exon:18837;Parent=Msa0861540-mRNA-1
chr5_4 exon 60887715 60887816 60887715 ID=Msa0861540-mRNA-1:exon:18838;Parent=Msa0861540-mRNA-1
chr5_4 exon 60888456 60888570 60888456 ID=Msa0861540-mRNA-1:exon:18839;Parent=Msa0861540-mRNA-1
chr5_4 exon 60888838 60888953 60888838 ID=Msa0861540-mRNA-1:exon:18840;Parent=Msa0861540-mRNA-1
chr5_4 exon 60889405 60889593 60889405 ID=Msa0861540-mRNA-1:exon:18841;Parent=Msa0861540-mRNA-1
chr5_4 exon 60891003 60891145 60891003 ID=Msa0861540-mRNA-1:exon:18842;Parent=Msa0861540-mRNA-1
chr5_4 exon 60891690 60892164 60891690 ID=Msa0861540-mRNA-1:exon:18843;Parent=Msa0861540-mRNA-1
chr5_4 five_prime_UTR 60887338 60887468 60887338 ID=Msa0861540-mRNA-1:five_prime_utr;Parent=Msa0861540-mRNA-1
chr5_4 CDS 60887469 60887590 60887469 ID=Msa0861540-mRNA-1:cds;Parent=Msa0861540-mRNA-1
chr5_4 CDS 60887715 60887816 60887715 ID=Msa0861540-mRNA-1:cds;Parent=Msa0861540-mRNA-1
chr5_4 CDS 60888456 60888570 60888456 ID=Msa0861540-mRNA-1:cds;Parent=Msa0861540-mRNA-1
chr5_4 CDS 60888838 60888953 60888838 ID=Msa0861540-mRNA-1:cds;Parent=Msa0861540-mRNA-1
chr5_4 CDS 60889405 60889593 60889405 ID=Msa0861540-mRNA-1:cds;Parent=Msa0861540-mRNA-1
chr5_4 CDS 60891003 60891145 60891003 ID=Msa0861540-mRNA-1:cds;Parent=Msa0861540-mRNA-1
chr5_4 CDS 60891690 60891871 60891690 ID=Msa0861540-mRNA-1:cds;Parent=Msa0861540-mRNA-1
chr5_4 three_prime_UTR 60891872 60892164 60891872 ID=Msa0861540-mRNA-1:three_prime_utr;Parent=Msa0861540-mRNA-1
Gene Sequence

>Msa0861540

ATGTGGCCTGCGATTATCTGTGGTTTGATTATTTACAAATTATTCAAATATTTCTTTTATGACGACGACGTTTTGGACATTGAAGCTTCTGATTCCACTGTTCTCTTCTCCGTAGCTAACAGGCTTCAGAAGCTTTTTGGTGGAAAGGTTTTTGTGGGTCTTCGTATTCCTGATGCTGATTCTGCTTCACCTCAAACCATTGATCTTGTTCTCCTCACTAAACGAGAGCTACTAGTGATATCGGTGAAGAACTTCTCGGGAATTTTGACAGTTCAAGGGGATGGTAGTTGGGCCTGTGAAAAGCCAGGAAAACATAAAGTTGACCGTCACCCTGATCCTTTGGAAGAAGTAAGAAAGCAGGCTTCTATCCTCGAGTCCTATCTTGAACAAAGAGGAGTTGTTCTACCTAAAGGATTCCTAACTTGTAAAGTTATACTTCCAAATCCTAAATTATGTACCATTCCTGCTAGTGATTTCCCATCTGAAGTTATTACCCATGAACAGTTGGTGCAACTGAAGCCCGGAACAAAGAGTGTGCTCTCTAGCTGGGTAAAGAATACCTTTCTTAGTGGGAAGAATGATATGCAAGAATCTAGCAATCAGAATCTTGAATTTGTCCTTAGCACAGCTCCGATATGGGATAGGTTGGAACTGAAAGGCAGCAAGTATGTATTGGGAGAGTTCCTTGAATTTAAGGGCAAGGAGGGGGATGTTGAGGCTTTAAGACATATTAGAAGATCAAAAGTTGGTCAGATGATAATCCAAAAGACAAGCATGTTTGGACTAGCTCCTTCTACGCTTCAAGTTTTGTACACTTTCCGTGACTACAGAACCAAGGGAGCATCAGCACCAGAGTGGAACGAAGTGACCGTAAAATCAAGTACTGAGATCATCTTTCAGGTTGAAAATGCTTCCAAGATCAAAAAGTTTAAGCTGTCTTCAGTCTGCTCTATGCATCTTAGCGCATAA

Protein sequence

>Msa0861540

MWPAIICGLIIYKLFKYFFYDDDVLDIEASDSTVLFSVANRLQKLFGGKVFVGLRIPDADSASPQTIDLVLLTKRELLVISVKNFSGILTVQGDGSWACEKPGKHKVDRHPDPLEEVRKQASILESYLEQRGVVLPKGFLTCKVILPNPKLCTIPASDFPSEVITHEQLVQLKPGTKSVLSSWVKNTFLSGKNDMQESSNQNLEFVLSTAPIWDRLELKGSKYVLGEFLEFKGKEGDVEALRHIRRSKVGQMIIQKTSMFGLAPSTLQVLYTFRDYRTKGASAPEWNEVTVKSSTEIIFQVENASKIKKFKLSSVCSMHLSA*