AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0026910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026910 MtrunA17_Chr1g0182711 100.000 446 0 0 1 446 1 446 0.0 899
Msa0026910 MtrunA17_Chr7g0262801 96.644 447 12 2 1 446 1 445 0.0 862
Msa0026910 MtrunA17_Chr4g0050561 52.000 325 155 1 115 438 83 407 4.26e-114 341
Msa0026910 MtrunA17_Chr1g0192151 44.670 394 186 3 65 437 34 416 3.70e-113 339
Msa0026910 MtrunA17_Chr4g0014731 45.000 380 188 1 79 437 38 417 1.39e-112 337
Msa0026910 MtrunA17_Chr3g0108321 52.769 307 140 3 68 372 40 343 1.85e-112 335
Msa0026910 MtrunA17_Chr3g0145011 46.361 371 192 2 74 437 18 388 1.38e-107 324
Msa0026910 MtrunA17_Chr3g0141901 45.251 358 196 0 80 437 28 385 5.75e-106 320
Msa0026910 MtrunA17_Chr8g0345461 46.334 341 175 3 112 446 85 423 7.80e-105 318
Msa0026910 MtrunA17_Chr1g0200081 49.201 313 154 3 136 446 123 432 1.74e-101 309
Msa0026910 MtrunA17_Chr7g0217421 44.490 245 135 1 189 433 40 283 2.06e-61 204
Msa0026910 MtrunA17_Chr7g0264521 47.137 227 117 1 190 416 208 431 5.12e-61 212
Msa0026910 MtrunA17_Chr7g0264521 41.026 234 138 0 182 415 473 706 1.31e-53 191
Msa0026910 MtrunA17_Chr1g0180791 46.696 227 118 1 190 416 207 430 3.26e-60 210
Msa0026910 MtrunA17_Chr1g0180791 41.453 234 137 0 182 415 472 705 1.80e-54 194
Msa0026910 MtrunA17_Chr4g0052411 40.816 245 144 1 189 433 230 473 1.10e-56 199
Msa0026910 MtrunA17_Chr2g0327121 45.815 227 120 2 190 416 209 432 2.72e-56 199
Msa0026910 MtrunA17_Chr2g0327121 41.453 234 137 0 182 415 474 707 2.40e-53 191
Msa0026910 MtrunA17_Chr2g0297281 41.224 245 143 1 189 433 287 530 2.22e-55 196
Msa0026910 MtrunA17_Chr7g0248361 37.377 305 177 5 142 433 136 439 2.64e-55 194
Msa0026910 MtrunA17_Chr4g0031821 43.320 247 136 3 190 433 322 567 5.55e-55 195
Msa0026910 MtrunA17_Chr7g0255651 38.683 243 149 0 173 415 267 509 3.25e-54 190
Msa0026910 MtrunA17_Chr7g0255651 26.496 234 158 4 211 432 36 267 6.36e-19 89.4
Msa0026910 MtrunA17_Chr7g0260601 42.972 249 134 4 190 433 242 487 4.15e-53 189
Msa0026910 MtrunA17_Chr3g0094871 41.870 246 140 2 190 433 13 257 7.76e-53 183
Msa0026910 MtrunA17_Chr6g0476861 39.576 283 165 4 156 433 163 444 1.12e-52 187
Msa0026910 MtrunA17_Chr3g0143721 40.000 245 146 1 189 433 250 493 1.94e-52 187
Msa0026910 MtrunA17_Chr8g0388371 39.442 251 143 2 190 432 406 655 2.39e-52 189
Msa0026910 MtrunA17_Chr5g0429571 42.126 254 139 4 183 431 308 558 2.52e-51 185
Msa0026910 MtrunA17_Chr3g0104211 41.667 252 143 3 183 431 299 549 3.18e-50 182
Msa0026910 MtrunA17_Chr7g0255691 37.786 262 161 1 173 432 271 532 3.47e-49 176
Msa0026910 MtrunA17_Chr7g0255691 29.545 220 149 3 193 408 22 239 2.07e-24 105
Msa0026910 MtrunA17_Chr8g0362771 39.754 244 144 2 190 433 239 479 5.92e-49 177
Msa0026910 MtrunA17_Chr3g0135721 37.943 282 164 3 153 434 196 466 1.20e-48 177
Msa0026910 MtrunA17_Chr2g0331161 39.683 252 148 2 190 438 417 667 3.58e-48 177
Msa0026910 MtrunA17_Chr7g0255641 40.161 249 146 2 186 432 656 903 2.19e-47 174
Msa0026910 MtrunA17_Chr7g0255641 34.579 214 124 5 227 429 432 640 9.79e-29 119
Msa0026910 MtrunA17_Chr2g0316851 38.298 235 134 4 187 414 593 823 6.48e-47 174
Msa0026910 MtrunA17_Chr6g0456351 40.486 247 141 3 190 434 319 561 3.54e-46 168
Msa0026910 MtrunA17_Chr7g0255721 41.036 251 145 2 184 432 681 930 3.96e-46 171
Msa0026910 MtrunA17_Chr7g0255721 32.636 239 152 4 187 421 385 618 1.83e-30 125
Msa0026910 MtrunA17_Chr4g0033451 39.754 244 138 3 189 426 381 621 4.30e-46 171
Msa0026910 MtrunA17_Chr1g0158881 37.600 250 147 3 187 434 328 570 8.99e-46 169
Msa0026910 MtrunA17_Chr3g0135761 36.140 285 171 3 150 434 191 464 4.50e-45 166
Msa0026910 MtrunA17_Chr5g0432631 39.184 245 145 2 190 434 231 471 1.27e-43 163
Msa0026910 MtrunA17_Chr7g0255901 39.062 256 143 8 178 424 629 880 1.43e-43 163
Msa0026910 MtrunA17_Chr4g0004121 36.538 260 151 5 182 432 236 490 2.67e-42 156
Msa0026910 MtrunA17_Chr2g0277831 38.938 226 136 2 190 414 245 469 7.29e-42 158
Msa0026910 MtrunA17_Chr2g0277831 38.627 233 138 3 186 416 531 760 3.76e-40 153
Msa0026910 MtrunA17_Chr5g0397121 36.327 245 148 4 189 430 514 753 1.46e-41 157
Msa0026910 MtrunA17_Chr1g0195731 38.528 231 133 5 189 415 935 1160 7.42e-41 155
Msa0026910 MtrunA17_Chr1g0204031 38.261 230 134 5 189 415 558 782 2.42e-40 154
Msa0026910 MtrunA17_Chr7g0246111 36.214 243 146 5 176 415 200 436 5.57e-40 150
Msa0026910 MtrunA17_Chr4g0038101 37.391 230 135 5 190 415 723 947 5.94e-40 153
Msa0026910 MtrunA17_Chr8g0387641 35.217 230 141 4 189 415 522 746 1.55e-39 151
Msa0026910 MtrunA17_Chr4g0026631 35.055 271 146 10 182 446 121 367 1.72e-39 147
Msa0026910 MtrunA17_Chr1g0202371 37.391 230 135 5 189 415 398 621 1.80e-39 150
Msa0026910 MtrunA17_Chr3g0129971 38.723 235 133 5 189 415 297 528 1.91e-39 151
Msa0026910 MtrunA17_Chr1g0195741 37.229 231 136 5 189 415 939 1164 2.74e-39 151
Msa0026910 MtrunA17_Chr2g0321241 33.955 268 153 9 182 446 126 372 6.06e-39 145
Msa0026910 MtrunA17_Chr4g0052271 36.596 235 142 5 182 414 113 342 1.74e-38 144
Msa0026910 MtrunA17_Chr3g0116131 36.889 225 133 5 189 409 903 1122 3.42e-38 148
Msa0026910 MtrunA17_Chr1g0202381 36.522 230 138 5 189 415 469 693 2.51e-37 145
Msa0026910 MtrunA17_Chr6g0462581 36.522 230 137 5 189 415 501 724 2.62e-37 145
Msa0026910 MtrunA17_Chr2g0327231 41.566 166 97 0 183 348 341 506 9.98e-37 140
Msa0026910 MtrunA17_Chr2g0327231 47.727 88 42 1 190 277 155 238 5.96e-19 89.4
Msa0026910 MtrunA17_Chr4g0043381 34.513 226 145 1 190 415 839 1061 1.21e-36 143
Msa0026910 MtrunA17_Chr3g0127401 36.522 230 136 5 190 415 83 306 2.69e-36 137
Msa0026910 MtrunA17_Chr6g0459561 37.398 246 140 8 177 416 371 608 9.19e-36 140
Msa0026910 MtrunA17_Chr3g0086401 38.306 248 126 5 190 415 387 629 1.32e-34 136
Msa0026910 MtrunA17_Chr3g0086401 34.468 235 135 7 200 424 106 331 4.47e-29 120
Msa0026910 MtrunA17_Chr4g0047411 33.922 283 158 7 178 433 166 446 1.71e-34 136
Msa0026910 MtrunA17_Chr3g0086411 35.102 245 138 3 190 416 217 458 1.98e-34 134
Msa0026910 MtrunA17_Chr3g0086411 34.706 170 102 3 276 436 7 176 4.02e-18 86.7
Msa0026910 MtrunA17_Chr5g0432641 34.191 272 171 4 167 434 166 433 5.31e-34 134
Msa0026910 MtrunA17_Chr3g0127431 36.364 231 135 6 190 415 86 309 1.24e-33 130
Msa0026910 MtrunA17_Chr1g0168321 31.597 288 140 6 156 433 134 374 1.67e-33 132
Msa0026910 MtrunA17_Chr8g0357301 32.245 245 152 3 196 431 477 716 3.77e-32 130
Msa0026910 MtrunA17_Chr4g0062081 70.886 79 22 1 191 268 10 88 1.26e-31 116
Msa0026910 MtrunA17_Chr3g0135781 41.615 161 90 2 190 350 57 213 2.25e-31 119
Msa0026910 MtrunA17_Chr6g0459541 33.588 262 137 10 184 415 38 292 4.55e-31 122
Msa0026910 MtrunA17_Chr2g0289231 35.931 231 127 7 189 408 298 518 1.08e-30 124
Msa0026910 MtrunA17_Chr6g0459551 34.632 231 130 7 177 401 91 306 2.26e-26 110
Msa0026910 MtrunA17_Chr5g0432391 37.278 169 97 2 266 431 81 243 4.53e-24 103
Msa0026910 MtrunA17_Chr1g0190401 31.527 203 134 3 173 371 659 860 8.67e-23 102
Msa0026910 MtrunA17_Chr6g0459531 27.362 307 156 13 133 415 2 265 7.62e-17 81.3
Msa0026910 MtrunA17_Chr8g0372701 34.682 173 99 6 192 358 225 389 5.27e-14 73.9
Msa0026910 MtrunA17_Chr5g0404651 34.161 161 93 5 203 358 229 381 1.15e-13 72.8
Msa0026910 MtrunA17_Chr5g0404291 34.965 143 79 5 224 362 387 519 1.58e-13 72.8
Msa0026910 MtrunA17_Chr2g0315971 30.435 184 111 7 195 370 477 651 3.98e-12 68.6
Msa0026910 MtrunA17_Chr2g0292561 32.335 167 84 7 215 360 226 384 9.48e-12 66.6
Msa0026910 MtrunA17_Chr6g0466811 33.333 156 84 6 215 358 236 383 1.23e-11 66.6
Msa0026910 MtrunA17_Chr6g0452361 31.169 154 91 5 212 358 18 163 2.59e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026910 AT4G29040.1 94.843 446 20 1 1 446 1 443 0.0 853
Msa0026910 AT2G20140.1 94.395 446 22 1 1 446 1 443 0.0 847
Msa0026910 AT5G58290.1 51.934 362 170 2 67 427 33 391 1.64e-133 390
Msa0026910 AT5G20000.1 51.692 325 156 1 115 438 85 409 4.48e-112 336
Msa0026910 AT5G19990.2 51.385 325 157 1 115 438 27 351 6.22e-112 334
Msa0026910 AT5G19990.1 51.385 325 157 1 115 438 85 409 6.76e-112 336
Msa0026910 AT5G19990.3 51.385 325 157 1 115 438 85 409 6.76e-112 336
Msa0026910 AT1G09100.1 45.789 380 185 2 79 437 37 416 2.39e-111 335
Msa0026910 AT3G05530.1 46.281 363 174 1 96 437 55 417 2.61e-111 335
Msa0026910 AT1G45000.1 46.631 371 191 3 74 437 15 385 2.93e-106 321
Msa0026910 AT5G43010.1 48.256 344 174 2 98 437 42 385 1.89e-105 318
Msa0026910 AT1G53750.1 46.334 341 175 3 112 446 85 423 3.24e-104 317
Msa0026910 AT1G53780.1 46.199 342 174 4 112 446 257 595 4.40e-98 306
Msa0026910 AT1G53780.4 46.199 342 174 4 112 446 257 595 4.40e-98 306
Msa0026910 AT1G53780.3 46.199 342 174 4 112 446 256 594 5.09e-98 306
Msa0026910 AT1G53780.2 46.199 342 174 4 112 446 278 616 7.98e-98 306
Msa0026910 AT1G45000.2 45.247 263 137 3 74 329 15 277 1.83e-67 219
Msa0026910 AT3G53230.1 47.137 227 117 1 190 416 207 430 1.73e-60 211
Msa0026910 AT3G53230.1 40.323 248 148 0 182 429 472 719 1.72e-54 194
Msa0026910 AT3G09840.1 47.137 227 117 2 190 416 206 429 9.75e-60 209
Msa0026910 AT3G09840.1 41.702 235 136 1 182 415 471 705 1.58e-51 186
Msa0026910 AT5G03340.1 47.137 227 117 2 190 416 206 429 1.02e-59 209
Msa0026910 AT5G03340.1 41.453 234 137 0 182 415 471 704 2.90e-53 191
Msa0026910 AT2G30950.4 41.633 245 142 1 189 433 229 472 2.46e-57 201
Msa0026910 AT2G30950.1 41.633 245 142 1 189 433 225 468 2.83e-57 201
Msa0026910 AT2G30950.2 41.633 245 142 1 189 433 225 468 2.83e-57 201
Msa0026910 AT2G30950.3 41.633 245 142 1 189 433 225 468 2.83e-57 201
Msa0026910 AT5G15250.1 43.673 245 137 1 189 433 222 465 1.64e-55 196
Msa0026910 AT1G06430.1 40.408 245 145 1 189 433 218 461 1.80e-55 196
Msa0026910 AT1G06430.3 40.408 245 145 1 189 433 218 461 1.80e-55 196
Msa0026910 AT1G06430.2 40.408 245 145 1 189 433 218 461 1.80e-55 196
Msa0026910 AT1G07510.1 43.725 247 135 3 190 433 326 571 3.75e-55 196
Msa0026910 AT3G47060.1 43.952 248 131 4 189 431 323 567 7.72e-54 192
Msa0026910 AT5G58870.1 43.952 248 131 4 189 431 327 571 9.73e-54 192
Msa0026910 AT1G50250.1 40.000 245 146 1 189 433 260 503 1.38e-52 188
Msa0026910 AT5G15250.2 39.925 268 137 2 189 433 222 488 4.07e-52 183
Msa0026910 AT2G29080.1 43.496 246 136 2 190 433 321 565 9.65e-52 187
Msa0026910 AT4G23940.1 39.044 251 144 2 190 432 429 678 7.23e-51 185
Msa0026910 AT5G42270.1 38.776 245 149 1 189 433 248 491 1.06e-50 182
Msa0026910 AT3G15120.2 39.485 233 132 3 187 413 725 954 4.91e-49 180
Msa0026910 AT3G15120.1 39.485 233 132 3 187 413 715 944 5.24e-49 180
Msa0026910 AT2G03670.1 38.400 250 151 2 186 432 281 530 1.62e-48 175
Msa0026910 AT2G03670.1 32.661 248 160 3 191 432 22 268 1.33e-35 139
Msa0026910 AT1G05910.1 40.323 248 139 3 189 430 379 623 1.89e-48 178
Msa0026910 AT2G26140.1 40.408 245 142 2 190 434 226 466 6.44e-48 175
Msa0026910 AT3G56690.1 40.000 230 137 1 186 415 719 947 2.53e-47 175
Msa0026910 AT3G56690.1 42.347 196 109 2 220 414 413 605 1.13e-42 161
Msa0026910 AT3G16290.1 39.749 239 143 1 190 428 409 646 4.57e-47 174
Msa0026910 AT5G53170.1 37.200 250 148 3 187 434 358 600 1.48e-45 169
Msa0026910 AT3G02450.1 39.850 266 152 4 183 444 326 587 1.59e-44 164
Msa0026910 AT2G45500.4 35.341 249 150 6 171 415 63 304 1.82e-43 156
Msa0026910 AT2G45500.3 35.341 249 150 6 171 415 63 304 1.82e-43 156
Msa0026910 AT2G45500.2 34.783 253 154 6 167 415 192 437 2.54e-42 156
Msa0026910 AT2G45500.1 35.341 249 150 6 171 415 200 441 2.90e-42 156
Msa0026910 AT1G03000.1 37.743 257 153 6 178 430 645 898 3.55e-42 160
Msa0026910 AT2G45500.5 34.783 253 154 6 167 415 202 447 4.50e-42 155
Msa0026910 AT1G80350.1 35.769 260 153 5 182 432 230 484 2.03e-41 154
Msa0026910 AT1G02890.1 38.095 231 134 5 189 415 942 1167 4.71e-41 157
Msa0026910 AT4G02480.1 38.095 231 134 5 189 415 961 1186 7.10e-41 156
Msa0026910 AT4G28000.3 37.826 230 134 6 189 415 518 741 1.51e-40 155
Msa0026910 AT4G28000.2 37.826 230 134 6 189 415 518 741 1.63e-40 155
Msa0026910 AT4G28000.1 37.826 230 134 6 189 415 516 739 1.68e-40 154
Msa0026910 AT5G53540.1 37.826 230 133 5 190 415 86 309 2.99e-40 149
Msa0026910 AT5G08470.1 36.726 226 140 1 190 415 843 1065 9.17e-40 153
Msa0026910 AT5G08470.3 36.726 226 140 1 190 415 834 1056 9.75e-40 153
Msa0026910 AT2G34560.1 36.283 226 140 3 190 414 102 324 4.85e-39 145
Msa0026910 AT2G34560.2 36.283 226 140 3 190 414 111 333 5.55e-39 145
Msa0026910 AT1G64110.5 35.652 230 140 5 189 415 517 741 1.41e-38 149
Msa0026910 AT1G64110.3 35.652 230 140 5 189 415 517 741 1.41e-38 149
Msa0026910 AT1G64110.2 35.652 230 140 5 189 415 519 743 1.49e-38 149
Msa0026910 AT1G64110.4 35.652 230 140 5 189 415 519 743 1.49e-38 149
Msa0026910 AT1G64110.1 35.652 230 140 5 189 415 514 738 1.76e-38 149
Msa0026910 AT5G52882.1 36.957 230 136 6 189 415 515 738 3.22e-38 148
Msa0026910 AT5G64580.1 37.447 235 136 6 189 415 314 545 6.64e-38 147
Msa0026910 AT3G01610.1 34.959 246 145 3 180 414 222 463 8.52e-38 147
Msa0026910 AT3G01610.1 36.123 227 140 3 190 415 527 749 1.78e-33 134
Msa0026910 AT3G01610.2 34.959 246 145 3 180 414 222 463 8.53e-38 147
Msa0026910 AT3G01610.2 36.123 227 140 3 190 415 527 749 1.74e-33 134
Msa0026910 AT4G27680.1 37.229 231 133 6 190 415 83 306 1.11e-37 142
Msa0026910 AT1G50140.3 37.500 232 132 6 190 415 713 937 1.63e-37 146
Msa0026910 AT1G50140.1 37.500 232 132 6 190 415 713 937 1.63e-37 146
Msa0026910 AT1G50140.4 37.500 232 132 6 190 415 713 937 1.63e-37 146
Msa0026910 AT1G50140.2 37.500 232 132 6 190 415 691 915 1.65e-37 146
Msa0026910 AT1G50140.5 37.500 232 132 6 190 415 691 915 1.65e-37 146
Msa0026910 AT2G03670.2 32.661 248 160 3 191 432 22 268 1.07e-36 140
Msa0026910 AT2G03670.2 38.028 142 87 1 186 326 281 422 3.52e-22 99.0
Msa0026910 AT2G27600.1 34.686 271 147 11 182 446 123 369 1.16e-36 140
Msa0026910 AT3G19740.1 36.087 230 138 5 190 415 703 927 6.58e-36 141
Msa0026910 AT4G24860.4 35.065 231 141 5 189 415 791 1016 8.65e-36 141
Msa0026910 AT4G24860.1 35.065 231 141 5 189 415 818 1043 8.92e-36 141
Msa0026910 AT4G24860.3 35.065 231 141 5 189 415 816 1041 9.08e-36 141
Msa0026910 AT4G24860.2 35.065 231 141 5 189 415 814 1039 1.19e-35 140
Msa0026910 AT3G27120.1 36.327 245 142 8 177 415 389 625 2.46e-35 139
Msa0026910 AT1G79560.2 32.653 245 151 3 196 431 497 736 2.44e-32 130
Msa0026910 AT1G79560.3 32.653 245 151 3 196 431 497 736 2.56e-32 130
Msa0026910 AT1G79560.1 32.653 245 151 3 196 431 497 736 2.85e-32 130
Msa0026910 AT4G04910.1 33.453 278 156 8 178 428 203 478 5.54e-32 129
Msa0026910 AT4G04180.1 35.808 229 130 6 189 408 317 537 9.00e-32 128
Msa0026910 AT4G04180.2 35.808 229 130 6 189 408 312 532 9.43e-32 128
Msa0026910 AT1G62130.2 32.143 224 133 6 189 409 744 951 5.73e-28 117
Msa0026910 AT1G62130.1 32.143 224 133 6 189 409 751 958 5.96e-28 117
Msa0026910 AT1G02890.2 33.766 231 116 6 189 415 942 1139 2.64e-26 112
Msa0026910 AT3G04340.1 33.511 188 120 3 186 372 782 965 5.02e-23 103
Msa0026910 AT5G08470.2 35.135 148 93 1 190 337 843 987 6.49e-20 93.2
Msa0026910 AT2G18193.1 34.568 162 93 6 201 357 219 372 1.07e-12 70.1
Msa0026910 AT2G18330.1 31.844 179 104 7 186 362 354 516 9.56e-12 67.4
Msa0026910 AT4G36580.1 30.481 187 100 7 184 362 349 513 1.06e-11 67.4

Find 137 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCGCTGCCGTCTTGTTTC+CGG 0.187678 1_1:-51020215 None:intergenic
AGCAAGGTCTTTCCTGTTCC+AGG 0.251915 1_1:-51022210 None:intergenic
AAAAGTTCCCTCACAAGTTT+TGG 0.253191 1_1:-51022954 None:intergenic
TAGAGAGACCTCAATCAAAA+TGG 0.277129 1_1:-51024845 None:intergenic
CTTTCAAATTTCACCGACTT+TGG 0.284176 1_1:+51024807 Msa0026910:three_prime_UTR
TGGTTTAGATGCGCAGATTC+AGG 0.304376 1_1:+51022092 Msa0026910:CDS
GGTGAAGGATTATTTGTTGA+TGG 0.316417 1_1:+51020383 Msa0026910:CDS
TGGCCCATCGTCGATCGATT+TGG 0.321086 1_1:-51020150 None:intergenic
AGGAGATGTAAAAGTGATTC+TGG 0.336312 1_1:+51023263 Msa0026910:CDS
AAGCTGGCTTACTTGCTCTA+AGG 0.338560 1_1:+51023620 Msa0026910:CDS
GCCGATGAGTGTTGGGAATC+TGG 0.341792 1_1:+51020497 Msa0026910:CDS
GCCGTCTTGTTTCCGGTCAC+CGG 0.353994 1_1:-51020208 None:intergenic
ATTTCATCCACAACTGCATA+TGG 0.355370 1_1:-51024745 None:intergenic
CTTCACATATATAGTCCTTC+TGG 0.358495 1_1:-51024617 None:intergenic
CCTGAACTATATGAAGATAT+TGG 0.363458 1_1:+51022150 Msa0026910:CDS
GAAAGTCGAGAAGGCTCCTT+TGG 0.379073 1_1:+51022050 Msa0026910:CDS
TATCAGGTTCTATCGGTTGT+TGG 0.393295 1_1:+51021988 Msa0026910:intron
TTGAATCAAAACCATCTAAC+TGG 0.394542 1_1:-51023239 None:intergenic
ATTCTCTGGAGCTGATATAA+AGG 0.399716 1_1:+51023585 Msa0026910:CDS
TCCTTTGCCTTCTTAAAGTC+GGG 0.401797 1_1:-51024563 None:intergenic
CCAATATCTTCATATAGTTC+AGG 0.405223 1_1:-51022150 None:intergenic
TCATGCTATTGTTTCGAGTT+CGG 0.405752 1_1:+51020539 Msa0026910:CDS
GGCGGAGGAAGATAGATCTA+AGG 0.407560 1_1:+51020455 Msa0026910:CDS
AAGAAGGTCGGGGATAATAA+AGG 0.421527 1_1:-51024646 None:intergenic
CATATAGTTCAGGATGTGTA+AGG 0.423583 1_1:-51022140 None:intergenic
GGTCACCGGGATGGCCTTGT+CGG 0.424135 1_1:-51020194 None:intergenic
GCTATTGTTTCGAGTTCGGT+TGG 0.424882 1_1:+51020543 Msa0026910:CDS
GCCTTGTCGGTTCATGCCGC+CGG 0.428871 1_1:-51020181 None:intergenic
TGTTTCGAGTTCGGTTGGGC+CGG 0.432915 1_1:+51020548 Msa0026910:CDS
TCATGCCGCCGGGAGTTCCT+TGG 0.437595 1_1:-51020170 None:intergenic
ATCCTTTGCCTTCTTAAAGT+CGG 0.438674 1_1:-51024564 None:intergenic
CTCAGCTTGCACTTCGATAC+CGG 0.441459 1_1:-51020342 None:intergenic
TAAAGTGTTTGGCACGTTCA+AGG 0.441738 1_1:-51020106 None:intergenic
GCTACATTCTTGCGTGTAGT+AGG 0.441990 1_1:+51022897 Msa0026910:CDS
TCGTAAACAACGCAAACAAA+AGG 0.444206 1_1:+51020284 Msa0026910:CDS
GTGGCTCGCCGATGAGTGTT+GGG 0.452232 1_1:+51020490 Msa0026910:CDS
ACACGCGCCGGTGGTGCTGC+TGG 0.453673 1_1:-51020258 None:intergenic
CCGTCTTGTTTCCGGTCACC+GGG 0.455694 1_1:-51020207 None:intergenic
GTTGGGCCGGAGTATTATGT+TGG 0.456605 1_1:+51020561 Msa0026910:CDS
GAGTTGCTGAACCAGTTAGA+TGG 0.457903 1_1:+51023228 Msa0026910:CDS
CGACCAGGTCGTAGCAAAGC+TGG 0.459189 1_1:-51023312 None:intergenic
TCAAGAGAGGTTGAAGCCTC+AGG 0.464256 1_1:+51020425 Msa0026910:CDS
AACAAAGAAGAGTGAACAAA+AGG 0.465923 1_1:+51020075 Msa0026910:five_prime_UTR
ATGACGAAGGATGAATTCTC+TGG 0.469733 1_1:+51023571 Msa0026910:CDS
GTGATGTTTAAGAAGAAAGA+AGG 0.471189 1_1:+51024590 Msa0026910:CDS
CTATTGTTTCGAGTTCGGTT+GGG 0.476955 1_1:+51020544 Msa0026910:CDS
CGTGGCTCGCCGATGAGTGT+TGG 0.479586 1_1:+51020489 Msa0026910:CDS
AGTTCAAACCTTTGCAAGCA+AGG 0.479869 1_1:-51022226 None:intergenic
GGTAACCGCGAAGCGGCATC+CGG 0.484519 1_1:-51020309 None:intergenic
TTGGGCCGGAGTATTATGTT+GGG 0.486241 1_1:+51020562 Msa0026910:CDS
ATCAAGACTTTCAATTCTGT+TGG 0.488586 1_1:-51023289 None:intergenic
TACGACCTGGTCGTATTGAT+AGG 0.488820 1_1:+51023322 Msa0026910:CDS
TTATATGGAGAACCTGGAAC+AGG 0.489995 1_1:+51022198 Msa0026910:CDS
TGAATTGATACAAAAGTACT+TGG 0.490609 1_1:+51022923 Msa0026910:CDS
AGAGAGACCTCAATCAAAAT+GGG 0.498162 1_1:-51024844 None:intergenic
AGATGAAAGTGTAAAGTGTT+TGG 0.498627 1_1:-51020117 None:intergenic
GACAAGGCCATCCCGGTGAC+CGG 0.499250 1_1:+51020196 Msa0026910:CDS
GAATCTTATGCTGACATTGG+TGG 0.503180 1_1:+51022072 Msa0026910:CDS
GTTGAAGCCTCAGGAGGAGA+AGG 0.505715 1_1:+51020434 Msa0026910:CDS
CCTTGTCGGTTCATGCCGCC+GGG 0.509201 1_1:-51020180 None:intergenic
AAATTAAGATACACACATCA+AGG 0.509917 1_1:+51023509 Msa0026910:intron
AAGGCAATATGTACTGAAGC+TGG 0.512575 1_1:+51023604 Msa0026910:CDS
ACTTTCATGACTGAGACCAT+TGG 0.513179 1_1:-51022033 None:intergenic
ATTCGAACCAGCAGCACCAC+CGG 0.515131 1_1:+51020251 Msa0026910:CDS
TTGGAATCTTATGCTGACAT+TGG 0.515821 1_1:+51022069 Msa0026910:CDS
TATTGGCATCAAGCCACCTA+AGG 0.517311 1_1:+51022167 Msa0026910:CDS
AATCGATCGACGATGGGCCA+AGG 0.521261 1_1:+51020153 Msa0026910:exon
GAAATTTGAAAGCAAATATG+TGG 0.528960 1_1:-51024796 None:intergenic
ATTTCCAAATCGATCGACGA+TGG 0.529615 1_1:+51020146 Msa0026910:exon
CTTGTTTCCGGTCACCGGGA+TGG 0.534444 1_1:-51020203 None:intergenic
AAAGTGTTTGGCACGTTCAA+GGG 0.538764 1_1:-51020105 None:intergenic
TCATCAATGAAAACAATAGC+AGG 0.540016 1_1:-51022999 None:intergenic
GAAGGATTATTTGTTGATGG+AGG 0.541197 1_1:+51020386 Msa0026910:CDS
CGTAAACAACGCAAACAAAA+GGG 0.541325 1_1:+51020285 Msa0026910:CDS
TTTCCAAATCGATCGACGAT+GGG 0.543471 1_1:+51020147 Msa0026910:exon
TCTAAGGGAACGCCGAATGA+AGG 0.547948 1_1:+51023636 Msa0026910:CDS
TGCCGCTTCGCGGTTACCGA+CGG 0.548832 1_1:+51020314 Msa0026910:CDS
ATGAACCGACAAGGCCATCC+CGG 0.552573 1_1:+51020189 Msa0026910:CDS
AGGAAAGACCTTGCTTGCAA+AGG 0.553721 1_1:+51022218 Msa0026910:CDS
GACTCATCCCGACTTTAAGA+AGG 0.557748 1_1:+51024556 Msa0026910:CDS
ACAACGCAAACAAAAGGGTC+CGG 0.558245 1_1:+51020290 Msa0026910:CDS
GCCTCAGGAGGAGAAGGCGG+AGG 0.564123 1_1:+51020440 Msa0026910:CDS
TGAGGCTGTTAAAGCTTGAG+AGG 0.566340 1_1:+51020361 Msa0026910:CDS
TATGAAACAATTTCCAAAGT+CGG 0.566779 1_1:-51024820 None:intergenic
ACGATGGGCCAAGGAACTCC+CGG 0.567566 1_1:+51020162 Msa0026910:exon
GTCATATTATATGGAGAACC+TGG 0.570307 1_1:+51022192 Msa0026910:CDS
TCCAGATTCCCAACACTCAT+CGG 0.570778 1_1:-51020498 None:intergenic
GATCCAGCTTTGCTACGACC+TGG 0.573418 1_1:+51023309 Msa0026910:CDS
GCAAGACGAAGTTGATCCAA+TGG 0.579653 1_1:+51022017 Msa0026910:CDS
TACAGGTATGATGCTCACTC+AGG 0.582791 1_1:+51023174 Msa0026910:intron
GGAAGAATTTGTTATGACGA+AGG 0.583336 1_1:+51023558 Msa0026910:CDS
ACTTTATCCATATGCAGTTG+TGG 0.583879 1_1:+51024738 Msa0026910:three_prime_UTR
ATTAGCTGATGATGTCAACT+TGG 0.586051 1_1:+51023537 Msa0026910:CDS
TCCTCCGCCTTCTCCTCCTG+AGG 0.587094 1_1:-51020441 None:intergenic
GTGGAGAACGTGAAATTCAA+AGG 0.587888 1_1:+51023196 Msa0026910:CDS
GATAAGGATCAATTGGAGCC+TGG 0.591343 1_1:+51020600 Msa0026910:CDS
AGCTGGCTTACTTGCTCTAA+GGG 0.591923 1_1:+51023621 Msa0026910:CDS
ATATAGTTCAGGATGTGTAA+GGG 0.593502 1_1:-51022139 None:intergenic
ATACAAAAGTACTTGGGAGA+TGG 0.593824 1_1:+51022930 Msa0026910:CDS
TCCCGACTTTAAGAAGGCAA+AGG 0.594284 1_1:+51024562 Msa0026910:CDS
ATTGGCATCAAGCCACCTAA+GGG 0.598240 1_1:+51022168 Msa0026910:CDS
GCGGTTACCGACGGTGACTC+CGG 0.599414 1_1:+51020323 Msa0026910:CDS
AGGGTCCGGATGCCGCTTCG+CGG 0.601269 1_1:+51020304 Msa0026910:CDS
AGGTATGATGCTCACTCAGG+TGG 0.601443 1_1:+51023177 Msa0026910:intron
AAAATCCCAACATAATACTC+CGG 0.602001 1_1:-51020567 None:intergenic
ATTGATGAAATTGATGCGGT+CGG 0.608145 1_1:+51023014 Msa0026910:CDS
AAGAAAGAAGGAGTGCCAGA+AGG 0.608420 1_1:+51024602 Msa0026910:CDS
GCAGATTCAGGAAATTAAAG+AGG 0.609731 1_1:+51022104 Msa0026910:CDS
GTTAAAGCTTGAGAGGGTGA+AGG 0.609846 1_1:+51020368 Msa0026910:CDS
AGATGGTCCAAAACTTGTGA+GGG 0.610145 1_1:+51022947 Msa0026910:CDS
TATAGTTCAGGATGTGTAAG+GGG 0.615490 1_1:-51022138 None:intergenic
AGTTTGTTGCGTATCAAGAG+AGG 0.615599 1_1:+51020412 Msa0026910:CDS
CCCGGTGACCGGAAACAAGA+CGG 0.618125 1_1:+51020207 Msa0026910:CDS
CTCAGTCATGAAAGTCGAGA+AGG 0.618736 1_1:+51022041 Msa0026910:CDS
GCAGCACCACCGGCGCGTGT+AGG 0.619998 1_1:+51020261 Msa0026910:CDS
GAAGCCTCAGGAGGAGAAGG+CGG 0.620796 1_1:+51020437 Msa0026910:CDS
CCCGGCGGCATGAACCGACA+AGG 0.629868 1_1:+51020180 Msa0026910:CDS
TGGCATCAAGCCACCTAAGG+GGG 0.630368 1_1:+51022170 Msa0026910:CDS
CACCGTCGGTAACCGCGAAG+CGG 0.634700 1_1:-51020316 None:intergenic
TGCATCAAAATAGCACAACC+AGG 0.642077 1_1:-51020618 None:intergenic
ATCTTCCTATCAATACGACC+AGG 0.647291 1_1:-51023327 None:intergenic
TTACGACCTACACGCGCCGG+TGG 0.648178 1_1:-51020267 None:intergenic
GAGATGGTCCAAAACTTGTG+AGG 0.650908 1_1:+51022946 Msa0026910:CDS
CGGTATCGAAGTGCAAGCTG+AGG 0.651265 1_1:+51020343 Msa0026910:CDS
TGTTTACGACCTACACGCGC+CGG 0.657461 1_1:-51020270 None:intergenic
TTCGATACCGGAGTCACCGT+CGG 0.658712 1_1:-51020330 None:intergenic
AGAGAGGTTGAAGCCTCAGG+AGG 0.663698 1_1:+51020428 Msa0026910:CDS
TTTCATTGATGAAATTGATG+CGG 0.663748 1_1:+51023010 Msa0026910:CDS
AATAGCAGGAGAAAGATCAT+CGG 0.664706 1_1:-51022985 None:intergenic
ATGTCAGCATAAGATTCCAA+AGG 0.668551 1_1:-51022066 None:intergenic
TTGATGCGGTCGGTACAAAG+AGG 0.668806 1_1:+51023024 Msa0026910:CDS
GAGGCTGTTAAAGCTTGAGA+GGG 0.670530 1_1:+51020362 Msa0026910:CDS
GAATTGATACAAAAGTACTT+GGG 0.673200 1_1:+51022924 Msa0026910:CDS
TTGGCATCAAGCCACCTAAG+GGG 0.701914 1_1:+51022169 Msa0026910:CDS
GATGAGTGTTGGGAATCTGG+AGG 0.708876 1_1:+51020500 Msa0026910:CDS
ATGGGCCAAGGAACTCCCGG+CGG 0.773777 1_1:+51020165 Msa0026910:CDS
TCTAAGGTTGATGATCTACG+TGG 0.778964 1_1:+51020471 Msa0026910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAATAAATAAATCG+TGG + chr1_1:51024109-51024128 Msa0026910:intron 10.0%
!!! TGTTGTTTTTATAATTTTGT+TGG + chr1_1:51020718-51020737 Msa0026910:intron 15.0%
!!! TTTTATAATTTTGTTGGAAT+TGG + chr1_1:51020724-51020743 Msa0026910:intron 15.0%
!!! TCATTATGATTTTGATTATA+AGG + chr1_1:51020776-51020795 Msa0026910:intron 15.0%
!!! CATTATGATTTTGATTATAA+GGG + chr1_1:51020777-51020796 Msa0026910:intron 15.0%
!! TTTCAAAAAAGAGATTATAA+GGG + chr1_1:51020809-51020828 Msa0026910:intron 15.0%
!!! CTTATTTTCATAAATTCTTT+AGG + chr1_1:51020938-51020957 Msa0026910:intron 15.0%
!! GAAATATTCTTTATAGAATT+AGG + chr1_1:51021904-51021923 Msa0026910:intron 15.0%
!!! ATTATGATTGATTTTTTATC+AGG + chr1_1:51021972-51021991 Msa0026910:intron 15.0%
!!! AACATGATTTTTTTCATTTT+TGG + chr1_1:51022471-51022490 Msa0026910:intron 15.0%
!!! ATAAATTTTTAACCTTCATT+CGG - chr1_1:51023651-51023670 None:intergenic 15.0%
!! TATTTATATACAGCATTTAT+TGG + chr1_1:51023813-51023832 Msa0026910:intron 15.0%
!! ATTTATATACAGCATTTATT+GGG + chr1_1:51023814-51023833 Msa0026910:intron 15.0%
!!! TTGTTTCATCTTTTAATATT+AGG + chr1_1:51024029-51024048 Msa0026910:intron 15.0%
!!! TGTTTCATCTTTTAATATTA+GGG + chr1_1:51024030-51024049 Msa0026910:intron 15.0%
!! TAAAAAAACATAAGATTGAT+AGG - chr1_1:51024437-51024456 None:intergenic 15.0%
!!! TCAATCTTATGTTTTTTTAA+AGG + chr1_1:51024438-51024457 Msa0026910:intron 15.0%
!! AATAGTAAGATATCATAAAT+TGG - chr1_1:51024515-51024534 None:intergenic 15.0%
!!! GATTTTATCTTTTGTTGATA+AGG + chr1_1:51020584-51020603 Msa0026910:CDS 20.0%
!! AAATTTGAATTGTTGATCTA+GGG + chr1_1:51020678-51020697 Msa0026910:intron 20.0%
!! CTTTCAAAAAAGAGATTATA+AGG + chr1_1:51020808-51020827 Msa0026910:intron 20.0%
!!! TATAAACATTTAAGCTGTTT+TGG - chr1_1:51020971-51020990 None:intergenic 20.0%
!!! TTCACTCTCATTTTATAAAT+GGG - chr1_1:51021185-51021204 None:intergenic 20.0%
!!! ATTCACTCTCATTTTATAAA+TGG - chr1_1:51021186-51021205 None:intergenic 20.0%
!!! TTCACTCTAGTTTTATAAAA+GGG - chr1_1:51021258-51021277 None:intergenic 20.0%
!!! ATTCACTCTAGTTTTATAAA+AGG - chr1_1:51021259-51021278 None:intergenic 20.0%
!! ATTTGATACCATACTATAAT+TGG + chr1_1:51021827-51021846 Msa0026910:intron 20.0%
!!! ATGAAAATTAGGAAAAGTTT+TGG + chr1_1:51021879-51021898 Msa0026910:intron 20.0%
!! TATATGAATCCTAAAATTGT+GGG - chr1_1:51023062-51023081 None:intergenic 20.0%
!!! CTTTTAGTATTAAGACAATA+AGG - chr1_1:51023910-51023929 None:intergenic 20.0%
!!! ATAGTTAGAAAAAGTTTTGT+GGG - chr1_1:51024339-51024358 None:intergenic 20.0%
!!! TATAGTTAGAAAAAGTTTTG+TGG - chr1_1:51024340-51024359 None:intergenic 20.0%
!!! TAACTATAGTTACATTTTGT+AGG + chr1_1:51024352-51024371 Msa0026910:intron 20.0%
!! AGATCAAATAAAAAGAAAGA+AGG - chr1_1:51024665-51024684 None:intergenic 20.0%
!!! TTTTGTTGATAAGGATCAAT+TGG + chr1_1:51020593-51020612 Msa0026910:CDS 25.0%
!!! TGCTATTTTGATGCATAATA+AGG + chr1_1:51020626-51020645 Msa0026910:CDS 25.0%
! GAAATTTGAATTGTTGATCT+AGG + chr1_1:51020677-51020696 Msa0026910:intron 25.0%
!! TGACTTATTTGAGTTTACTT+TGG + chr1_1:51020843-51020862 Msa0026910:intron 25.0%
!! GACTTATTTGAGTTTACTTT+GGG + chr1_1:51020844-51020863 Msa0026910:intron 25.0%
! ATAACATGTCTATAAGTTGT+TGG + chr1_1:51020914-51020933 Msa0026910:intron 25.0%
! ATAAGCACTTATATGATAAG+CGG + chr1_1:51021005-51021024 Msa0026910:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr1_1:51021047-51021066 Msa0026910:intron 25.0%
! TGTTTGATGTAACTAAAGTA+TGG + chr1_1:51021095-51021114 Msa0026910:intron 25.0%
! GTTTGATGTAACTAAAGTAT+GGG + chr1_1:51021096-51021115 Msa0026910:intron 25.0%
! TATAAAATGAGAGTGAATTG+AGG + chr1_1:51021188-51021207 Msa0026910:intron 25.0%
! TTATAGAATTAGCTATCTCT+AGG + chr1_1:51021427-51021446 Msa0026910:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr1_1:51021047-51021066 Msa0026910:intron 25.0%
! ATACCATACTATAATTGGTT+TGG + chr1_1:51021832-51021851 Msa0026910:intron 25.0%
!! TACCATACTATAATTGGTTT+GGG + chr1_1:51021833-51021852 Msa0026910:intron 25.0%
! CAAATTATACAGACAATAAC+AGG - chr1_1:51021935-51021954 None:intergenic 25.0%
!!! GATTTTTTATCAGGTTCTAT+CGG + chr1_1:51021981-51022000 Msa0026910:intron 25.0%
!! GATAAATACTGTATTGATAC+TGG + chr1_1:51022589-51022608 Msa0026910:intron 25.0%
!!! TGAATTGATACAAAAGTACT+TGG + chr1_1:51022923-51022942 Msa0026910:CDS 25.0%
!!! GAATTGATACAAAAGTACTT+GGG + chr1_1:51022924-51022943 Msa0026910:CDS 25.0%
! TTTCATTGATGAAATTGATG+CGG + chr1_1:51023010-51023029 Msa0026910:CDS 25.0%
! CTATATGAATCCTAAAATTG+TGG - chr1_1:51023063-51023082 None:intergenic 25.0%
!!! CACAATTTTAGGATTCATAT+AGG + chr1_1:51023061-51023080 Msa0026910:intron 25.0%
!!! AATTTTAGGATTCATATAGG+TGG + chr1_1:51023064-51023083 Msa0026910:intron 25.0%
!!! ATTTTAGGATTCATATAGGT+GGG + chr1_1:51023065-51023084 Msa0026910:intron 25.0%
! CAATTAAACTCATGAATGTA+AGG - chr1_1:51023143-51023162 None:intergenic 25.0%
! TAATTGTTAATATGCCTTAC+AGG + chr1_1:51023157-51023176 Msa0026910:intron 25.0%
! AAATTAAGATACACACATCA+AGG + chr1_1:51023509-51023528 Msa0026910:intron 25.0%
! ACCCAAATATATTATGCTAA+GGG + chr1_1:51023744-51023763 Msa0026910:intron 25.0%
! AAAAACTAAGTTGTAGTTGT+TGG - chr1_1:51023993-51024012 None:intergenic 25.0%
!! TTCATCTTTTAATATTAGGG+TGG + chr1_1:51024033-51024052 Msa0026910:intron 25.0%
! GATTCACTGAAGTAAAAAAT+TGG - chr1_1:51024400-51024419 None:intergenic 25.0%
! TAAGATTGATAGGTAAAGAT+GGG - chr1_1:51024427-51024446 None:intergenic 25.0%
! ATAAGATTGATAGGTAAAGA+TGG - chr1_1:51024428-51024447 None:intergenic 25.0%
!! GATTTGTCTGTATTATCTTT+TGG + chr1_1:51024460-51024479 Msa0026910:intron 25.0%
! AGTAAGATATCATAAATTGG+AGG - chr1_1:51024512-51024531 None:intergenic 25.0%
!!! ATTGCTTTTATATCTTGTTC+AGG + chr1_1:51024532-51024551 Msa0026910:intron 25.0%
! AAATAAAAAGAAAGAAGGTC+GGG - chr1_1:51024660-51024679 None:intergenic 25.0%
! CAAATAAAAAGAAAGAAGGT+CGG - chr1_1:51024661-51024680 None:intergenic 25.0%
!! GTTATACTTTTGCAAACAAA+TGG + chr1_1:51024690-51024709 Msa0026910:three_prime_UTR 25.0%
! GAAATTTGAAAGCAAATATG+TGG - chr1_1:51024799-51024818 None:intergenic 25.0%
! TATGAAACAATTTCCAAAGT+CGG - chr1_1:51024823-51024842 None:intergenic 25.0%
AACAAAGAAGAGTGAACAAA+AGG + chr1_1:51020075-51020094 Msa0026910:five_prime_UTR 30.0%
! AGATGAAAGTGTAAAGTGTT+TGG - chr1_1:51020120-51020139 None:intergenic 30.0%
AAAATCCCAACATAATACTC+CGG - chr1_1:51020570-51020589 None:intergenic 30.0%
! AGAGATTATAAGGGTTTGTT+TGG + chr1_1:51020818-51020837 Msa0026910:intron 30.0%
GCTAATAAGCCAAAAAGATA+CGG - chr1_1:51021073-51021092 None:intergenic 30.0%
!!! CTCATTTTATAAATGGGTTG+AGG - chr1_1:51021179-51021198 None:intergenic 30.0%
TATAAAACTAGAGTGAATCG+AGG + chr1_1:51021261-51021280 Msa0026910:intron 30.0%
AAGCTCATTACTTCTTCAAA+AGG - chr1_1:51021806-51021825 None:intergenic 30.0%
TTGAACCTGGAATGAAAATT+AGG + chr1_1:51021868-51021887 Msa0026910:intron 30.0%
! CTTTTCCTAATTTTCATTCC+AGG - chr1_1:51021876-51021895 None:intergenic 30.0%
ATATAGTTCAGGATGTGTAA+GGG - chr1_1:51022142-51022161 None:intergenic 30.0%
CCAATATCTTCATATAGTTC+AGG - chr1_1:51022153-51022172 None:intergenic 30.0%
CCTGAACTATATGAAGATAT+TGG + chr1_1:51022150-51022169 Msa0026910:CDS 30.0%
TCAATAATGAATCAATGCTG+TGG + chr1_1:51022270-51022289 Msa0026910:intron 30.0%
ATTATCAGATCTGTAGAGTT+TGG + chr1_1:51022342-51022361 Msa0026910:intron 30.0%
AAGATGAAAATCTCTGTGTT+TGG + chr1_1:51022505-51022524 Msa0026910:intron 30.0%
AGATGAAAATCTCTGTGTTT+GGG + chr1_1:51022506-51022525 Msa0026910:intron 30.0%
! GATTCCTTATGTACTGTTTT+GGG + chr1_1:51022536-51022555 Msa0026910:intron 30.0%
! ATTCCTTATGTACTGTTTTG+GGG + chr1_1:51022537-51022556 Msa0026910:intron 30.0%
TGCTTCTTACTAATACAACT+TGG - chr1_1:51022711-51022730 None:intergenic 30.0%
! TTAAAGAAGCAGCAGTTTTT+CGG - chr1_1:51022755-51022774 None:intergenic 30.0%
TCATCAATGAAAACAATAGC+AGG - chr1_1:51023002-51023021 None:intergenic 30.0%
!!! TTTTAGGATTCATATAGGTG+GGG + chr1_1:51023066-51023085 Msa0026910:intron 30.0%
TTGAATCAAAACCATCTAAC+TGG - chr1_1:51023242-51023261 None:intergenic 30.0%
!!! TTAGATGGTTTTGATTCAAG+AGG + chr1_1:51023243-51023262 Msa0026910:CDS 30.0%
ATCAAGACTTTCAATTCTGT+TGG - chr1_1:51023292-51023311 None:intergenic 30.0%
CAAAACTAATCATGTTTACC+TGG - chr1_1:51023395-51023414 None:intergenic 30.0%
GAATCAACAGAAACAACATT+AGG - chr1_1:51023423-51023442 None:intergenic 30.0%
! TGCATATTTAAGATACCACA+TGG - chr1_1:51023445-51023464 None:intergenic 30.0%
GTCAAAACTAGCAAGTTAAT+AGG - chr1_1:51023704-51023723 None:intergenic 30.0%
GACCCAAATATATTATGCTA+AGG + chr1_1:51023743-51023762 Msa0026910:intron 30.0%
GCCCTTAGCATAATATATTT+GGG - chr1_1:51023748-51023767 None:intergenic 30.0%
TATACAGCATTTATTGGGTT+AGG + chr1_1:51023819-51023838 Msa0026910:intron 30.0%
ATACAGCATTTATTGGGTTA+GGG + chr1_1:51023820-51023839 Msa0026910:intron 30.0%
AGCAACCTAAAAAATTTGCA+TGG + chr1_1:51023881-51023900 Msa0026910:intron 30.0%
!!! AGCATTTTTTATTCTGACAC+TGG - chr1_1:51024231-51024250 None:intergenic 30.0%
AAATGCTTGTTTGATTCTAC+TGG + chr1_1:51024244-51024263 Msa0026910:intron 30.0%
AATGCTTGTTTGATTCTACT+GGG + chr1_1:51024245-51024264 Msa0026910:intron 30.0%
GGTAACTTGAGTGTATATTT+AGG + chr1_1:51024373-51024392 Msa0026910:intron 30.0%
GTGATGTTTAAGAAGAAAGA+AGG + chr1_1:51024590-51024609 Msa0026910:CDS 30.0%
AATAAAAAGAAAGAAGGTCG+GGG - chr1_1:51024659-51024678 None:intergenic 30.0%
!!! TTCATATCCCATTTTGATTG+AGG + chr1_1:51024837-51024856 Msa0026910:three_prime_UTR 30.0%
TCGTAAACAACGCAAACAAA+AGG + chr1_1:51020284-51020303 Msa0026910:CDS 35.0%
CGTAAACAACGCAAACAAAA+GGG + chr1_1:51020285-51020304 Msa0026910:CDS 35.0%
! GGTGAAGGATTATTTGTTGA+TGG + chr1_1:51020383-51020402 Msa0026910:CDS 35.0%
! GAAGGATTATTTGTTGATGG+AGG + chr1_1:51020386-51020405 Msa0026910:CDS 35.0%
TGATGTAACTAAAGTATGGG+AGG + chr1_1:51021099-51021118 Msa0026910:intron 35.0%
GATGTAACTAAAGTATGGGA+GGG + chr1_1:51021100-51021119 Msa0026910:intron 35.0%
!! TCGGAGTAATTTGCTGTTTA+AGG + chr1_1:51021286-51021305 Msa0026910:intron 35.0%
!! ATTTGCTGTTTAAGGTAGAC+TGG + chr1_1:51021294-51021313 Msa0026910:intron 35.0%
!! TTTGCTGTTTAAGGTAGACT+GGG + chr1_1:51021295-51021314 Msa0026910:intron 35.0%
TTCATCGAAAGGAGATGAAT+GGG - chr1_1:51021354-51021373 None:intergenic 35.0%
ATTCATCGAAAGGAGATGAA+TGG - chr1_1:51021355-51021374 None:intergenic 35.0%
AAGCGCATAAATTCATCGAA+AGG - chr1_1:51021365-51021384 None:intergenic 35.0%
!! TAGTTGCTGTTTAATGTGAC+TGG + chr1_1:51021716-51021735 Msa0026910:intron 35.0%
!! AGTTGCTGTTTAATGTGACT+GGG + chr1_1:51021717-51021736 Msa0026910:intron 35.0%
TGTTTAATGTGACTGGGAAT+GGG + chr1_1:51021723-51021742 Msa0026910:intron 35.0%
ACTTCTTCAAAAGGATACGA+AGG - chr1_1:51021797-51021816 None:intergenic 35.0%
CTCCCAAACCAATTATAGTA+TGG - chr1_1:51021838-51021857 None:intergenic 35.0%
ATGTCAGCATAAGATTCCAA+AGG - chr1_1:51022069-51022088 None:intergenic 35.0%
TTGGAATCTTATGCTGACAT+TGG + chr1_1:51022069-51022088 Msa0026910:CDS 35.0%
GCAGATTCAGGAAATTAAAG+AGG + chr1_1:51022104-51022123 Msa0026910:CDS 35.0%
TATAGTTCAGGATGTGTAAG+GGG - chr1_1:51022141-51022160 None:intergenic 35.0%
CATATAGTTCAGGATGTGTA+AGG - chr1_1:51022143-51022162 None:intergenic 35.0%
GTCATATTATATGGAGAACC+TGG + chr1_1:51022192-51022211 Msa0026910:CDS 35.0%
GATGAAAATCTCTGTGTTTG+GGG + chr1_1:51022507-51022526 Msa0026910:intron 35.0%
ATGAAAATCTCTGTGTTTGG+GGG + chr1_1:51022508-51022527 Msa0026910:intron 35.0%
! GGATTCCTTATGTACTGTTT+TGG + chr1_1:51022535-51022554 Msa0026910:intron 35.0%
!! TTCCTTATGTACTGTTTTGG+GGG + chr1_1:51022538-51022557 Msa0026910:intron 35.0%
!! ATACAAAAGTACTTGGGAGA+TGG + chr1_1:51022930-51022949 Msa0026910:CDS 35.0%
! AAAAGTTCCCTCACAAGTTT+TGG - chr1_1:51022957-51022976 None:intergenic 35.0%
AATAGCAGGAGAAAGATCAT+CGG - chr1_1:51022988-51023007 None:intergenic 35.0%
ATTGATGAAATTGATGCGGT+CGG + chr1_1:51023014-51023033 Msa0026910:CDS 35.0%
! TTTAGGATTCATATAGGTGG+GGG + chr1_1:51023067-51023086 Msa0026910:intron 35.0%
TGATGCATTGTATCACTTCA+TGG + chr1_1:51023100-51023119 Msa0026910:intron 35.0%
ATCACTTCATGGACTCTTTA+AGG + chr1_1:51023111-51023130 Msa0026910:intron 35.0%
AGGAGATGTAAAAGTGATTC+TGG + chr1_1:51023263-51023282 Msa0026910:CDS 35.0%
!!! CTTGTTTTGATATCAGGAAG+AGG - chr1_1:51023360-51023379 None:intergenic 35.0%
!!! CGTCTTCTTGTTTTGATATC+AGG - chr1_1:51023366-51023385 None:intergenic 35.0%
! AACAAGAAGACGTATTTTCC+AGG + chr1_1:51023374-51023393 Msa0026910:CDS 35.0%
!! TTGTTTCTGTTGATTCCATG+TGG + chr1_1:51023427-51023446 Msa0026910:intron 35.0%
! ATTAGCTGATGATGTCAACT+TGG + chr1_1:51023537-51023556 Msa0026910:CDS 35.0%
!! GGAAGAATTTGTTATGACGA+AGG + chr1_1:51023558-51023577 Msa0026910:CDS 35.0%
!! ATTCTCTGGAGCTGATATAA+AGG + chr1_1:51023585-51023604 Msa0026910:CDS 35.0%
CGCCCTTAGCATAATATATT+TGG - chr1_1:51023749-51023768 None:intergenic 35.0%
!!! GGATGCCATGCAAATTTTTT+AGG - chr1_1:51023889-51023908 None:intergenic 35.0%
AAGTTGTAGTTGTTGGAACT+GGG - chr1_1:51023986-51024005 None:intergenic 35.0%
TAAGTTGTAGTTGTTGGAAC+TGG - chr1_1:51023987-51024006 None:intergenic 35.0%
AAAAGAACAAAAGCAGGCTT+GGG - chr1_1:51024163-51024182 None:intergenic 35.0%
TGATCCAAAAGAACAAAAGC+AGG - chr1_1:51024169-51024188 None:intergenic 35.0%
CTCAGATATCCTGTCAATAT+AGG - chr1_1:51024275-51024294 None:intergenic 35.0%
!! GCATGTCTTGACTTTAGAAT+GGG + chr1_1:51024301-51024320 Msa0026910:intron 35.0%
ATCCTTTGCCTTCTTAAAGT+CGG - chr1_1:51024567-51024586 None:intergenic 35.0%
CTTCACATATATAGTCCTTC+TGG - chr1_1:51024620-51024639 None:intergenic 35.0%
ACTTTATCCATATGCAGTTG+TGG + chr1_1:51024738-51024757 Msa0026910:three_prime_UTR 35.0%
ATTTCATCCACAACTGCATA+TGG - chr1_1:51024748-51024767 None:intergenic 35.0%
!! CTTTCAAATTTCACCGACTT+TGG + chr1_1:51024807-51024826 Msa0026910:three_prime_UTR 35.0%
AGAGAGACCTCAATCAAAAT+GGG - chr1_1:51024847-51024866 None:intergenic 35.0%
TAGAGAGACCTCAATCAAAA+TGG - chr1_1:51024848-51024867 None:intergenic 35.0%
! AAAGTGTTTGGCACGTTCAA+GGG - chr1_1:51020108-51020127 None:intergenic 40.0%
! AAAGTGTTTGGCACGTTCAA+GGG - chr1_1:51020108-51020127 None:intergenic 40.0%
! TAAAGTGTTTGGCACGTTCA+AGG - chr1_1:51020109-51020128 None:intergenic 40.0%
ATTTCCAAATCGATCGACGA+TGG + chr1_1:51020146-51020165 Msa0026910:exon 40.0%
TTTCCAAATCGATCGACGAT+GGG + chr1_1:51020147-51020166 Msa0026910:exon 40.0%
!! AGTTTGTTGCGTATCAAGAG+AGG + chr1_1:51020412-51020431 Msa0026910:CDS 40.0%
!! TCTAAGGTTGATGATCTACG+TGG + chr1_1:51020471-51020490 Msa0026910:CDS 40.0%
TGCATCAAAATAGCACAACC+AGG - chr1_1:51020621-51020640 None:intergenic 40.0%
AGACTGTTTGAGGGAGATTA+TGG + chr1_1:51020882-51020901 Msa0026910:intron 40.0%
!! CAAAAAGATACGGCCTTGTT+TGG - chr1_1:51021063-51021082 None:intergenic 40.0%
! CAAACAAGGCCGTATCTTTT+TGG + chr1_1:51021061-51021080 Msa0026910:intron 40.0%
! TGTTTAAGGTAGACTGGGAA+TGG + chr1_1:51021300-51021319 Msa0026910:intron 40.0%
! GTTTAAGGTAGACTGGGAAT+GGG + chr1_1:51021301-51021320 Msa0026910:intron 40.0%
!! CAAAAAGACAAGGCCTTGTT+TGG - chr1_1:51021589-51021608 None:intergenic 40.0%
!! CAAACAAGGCCTTGTCTTTT+TGG + chr1_1:51021587-51021606 Msa0026910:intron 40.0%
CTGTTTAATGTGACTGGGAA+TGG + chr1_1:51021722-51021741 Msa0026910:intron 40.0%
! GAGCATCTGAATTTTGAACC+TGG + chr1_1:51021855-51021874 Msa0026910:intron 40.0%
! TATCAGGTTCTATCGGTTGT+TGG + chr1_1:51021988-51022007 Msa0026910:intron 40.0%
ACTTTCATGACTGAGACCAT+TGG - chr1_1:51022036-51022055 None:intergenic 40.0%
GAATCTTATGCTGACATTGG+TGG + chr1_1:51022072-51022091 Msa0026910:CDS 40.0%
TATAATATGACCCCCTTAGG+TGG - chr1_1:51022183-51022202 None:intergenic 40.0%
CCATATAATATGACCCCCTT+AGG - chr1_1:51022186-51022205 None:intergenic 40.0%
CCTAAGGGGGTCATATTATA+TGG + chr1_1:51022183-51022202 Msa0026910:CDS 40.0%
TTATATGGAGAACCTGGAAC+AGG + chr1_1:51022198-51022217 Msa0026910:CDS 40.0%
AGTTCAAACCTTTGCAAGCA+AGG - chr1_1:51022229-51022248 None:intergenic 40.0%
! GCTATTTGTCTGTTGCTTAC+AGG + chr1_1:51022427-51022446 Msa0026910:intron 40.0%
!! TGTTGCTTACAGGTACTGAA+GGG + chr1_1:51022437-51022456 Msa0026910:intron 40.0%
TGAAAATCTCTGTGTTTGGG+GGG + chr1_1:51022509-51022528 Msa0026910:intron 40.0%
AAAAACATGCACACTCGCAA+AGG - chr1_1:51022642-51022661 None:intergenic 40.0%
! CTAACTGATAGTGCATGTGA+TGG - chr1_1:51022829-51022848 None:intergenic 40.0%
CATCACATGCACTATCAGTT+AGG + chr1_1:51022827-51022846 Msa0026910:intron 40.0%
AGATGGTCCAAAACTTGTGA+GGG + chr1_1:51022947-51022966 Msa0026910:CDS 40.0%
GTGGAGAACGTGAAATTCAA+AGG + chr1_1:51023196-51023215 Msa0026910:CDS 40.0%
ATCTTCCTATCAATACGACC+AGG - chr1_1:51023330-51023349 None:intergenic 40.0%
ATGACGAAGGATGAATTCTC+TGG + chr1_1:51023571-51023590 Msa0026910:CDS 40.0%
AAGGCAATATGTACTGAAGC+TGG + chr1_1:51023604-51023623 Msa0026910:CDS 40.0%
ATATTATGCTAAGGGCGAGT+TGG + chr1_1:51023752-51023771 Msa0026910:intron 40.0%
TATTATGCTAAGGGCGAGTT+GGG + chr1_1:51023753-51023772 Msa0026910:intron 40.0%
!! AAATCGTGGAAAGTACTCCT+TGG + chr1_1:51024123-51024142 Msa0026910:intron 40.0%
AAAGAACAAAAGCAGGCTTG+GGG - chr1_1:51024162-51024181 None:intergenic 40.0%
CAAAAGAACAAAAGCAGGCT+TGG - chr1_1:51024164-51024183 None:intergenic 40.0%
!! CAAGCCTGCTTTTGTTCTTT+TGG + chr1_1:51024162-51024181 Msa0026910:intron 40.0%
! GGCATGTCTTGACTTTAGAA+TGG + chr1_1:51024300-51024319 Msa0026910:intron 40.0%
TCCTTTGCCTTCTTAAAGTC+GGG - chr1_1:51024566-51024585 None:intergenic 40.0%
AAGAAGGTCGGGGATAATAA+AGG - chr1_1:51024649-51024668 None:intergenic 40.0%
ACAACGCAAACAAAAGGGTC+CGG + chr1_1:51020290-51020309 Msa0026910:CDS 45.0%
TGAGGCTGTTAAAGCTTGAG+AGG + chr1_1:51020361-51020380 Msa0026910:CDS 45.0%
GAGGCTGTTAAAGCTTGAGA+GGG + chr1_1:51020362-51020381 Msa0026910:CDS 45.0%
GTTAAAGCTTGAGAGGGTGA+AGG + chr1_1:51020368-51020387 Msa0026910:CDS 45.0%
TCCAGATTCCCAACACTCAT+CGG - chr1_1:51020501-51020520 None:intergenic 45.0%
! TTGGGCCGGAGTATTATGTT+GGG + chr1_1:51020562-51020581 Msa0026910:CDS 45.0%
GATAAGGATCAATTGGAGCC+TGG + chr1_1:51020600-51020619 Msa0026910:CDS 45.0%
ATTAGTCGCGAGACTGTTTG+AGG + chr1_1:51020872-51020891 Msa0026910:intron 45.0%
TTAGTCGCGAGACTGTTTGA+GGG + chr1_1:51020873-51020892 Msa0026910:intron 45.0%
GGAGGGTTGAGAATTAAGAG+TGG + chr1_1:51021117-51021136 Msa0026910:intron 45.0%
! TGCTGTTTGAGAGTTGAGAG+TGG + chr1_1:51021224-51021243 Msa0026910:intron 45.0%
ACTAGAGTGAATCGAGGCAT+CGG + chr1_1:51021267-51021286 Msa0026910:intron 45.0%
TACCAGCCACACTGTAATTG+CGG + chr1_1:51021392-51021411 Msa0026910:intron 45.0%
TCTCAACCGCAATTACAGTG+TGG - chr1_1:51021401-51021420 None:intergenic 45.0%
GCTAACGAGCCAAAAAGACA+AGG - chr1_1:51021599-51021618 None:intergenic 45.0%
! GCAAGACGAAGTTGATCCAA+TGG + chr1_1:51022017-51022036 Msa0026910:CDS 45.0%
CTCAGTCATGAAAGTCGAGA+AGG + chr1_1:51022041-51022060 Msa0026910:CDS 45.0%
TGGTTTAGATGCGCAGATTC+AGG + chr1_1:51022092-51022111 Msa0026910:CDS 45.0%
TATTGGCATCAAGCCACCTA+AGG + chr1_1:51022167-51022186 Msa0026910:CDS 45.0%
ATTGGCATCAAGCCACCTAA+GGG + chr1_1:51022168-51022187 Msa0026910:CDS 45.0%
AGGAAAGACCTTGCTTGCAA+AGG + chr1_1:51022218-51022237 Msa0026910:CDS 45.0%
!! CTGTTGCTTACAGGTACTGA+AGG + chr1_1:51022436-51022455 Msa0026910:intron 45.0%
CACCCCCAAAACAGTACATA+AGG - chr1_1:51022543-51022562 None:intergenic 45.0%
!!! CTTATGTACTGTTTTGGGGG+TGG + chr1_1:51022541-51022560 Msa0026910:intron 45.0%
! ACAGTTTGCTCTTCTGTCTG+TGG + chr1_1:51022675-51022694 Msa0026910:intron 45.0%
ATACATGCTCTTGTGCCTTC+AGG + chr1_1:51022854-51022873 Msa0026910:intron 45.0%
GCTACATTCTTGCGTGTAGT+AGG + chr1_1:51022897-51022916 Msa0026910:CDS 45.0%
GAGATGGTCCAAAACTTGTG+AGG + chr1_1:51022946-51022965 Msa0026910:CDS 45.0%
! GCTGCTGAACCCACAATTTT+AGG + chr1_1:51023050-51023069 Msa0026910:intron 45.0%
GAGTGAGCATCATACCTGTA+AGG - chr1_1:51023174-51023193 None:intergenic 45.0%
TACAGGTATGATGCTCACTC+AGG + chr1_1:51023174-51023193 Msa0026910:intron 45.0%
GAGTTGCTGAACCAGTTAGA+TGG + chr1_1:51023228-51023247 Msa0026910:CDS 45.0%
! TACGACCTGGTCGTATTGAT+AGG + chr1_1:51023322-51023341 Msa0026910:CDS 45.0%
! AAGCTGGCTTACTTGCTCTA+AGG + chr1_1:51023620-51023639 Msa0026910:CDS 45.0%
! AGCTGGCTTACTTGCTCTAA+GGG + chr1_1:51023621-51023640 Msa0026910:CDS 45.0%
ATTATGCTAAGGGCGAGTTG+GGG + chr1_1:51023754-51023773 Msa0026910:intron 45.0%
! TATTGGGTTAGGGTTGTCTG+TGG + chr1_1:51023830-51023849 Msa0026910:intron 45.0%
! ATTGGGTTAGGGTTGTCTGT+GGG + chr1_1:51023831-51023850 Msa0026910:intron 45.0%
TAGTTGTTGGAACTGGGAAG+AGG - chr1_1:51023980-51023999 None:intergenic 45.0%
ATCATCATACTTTCCCGCGA+GGG + chr1_1:51024185-51024204 Msa0026910:intron 45.0%
CTGGGTAGTCCTATATTGAC+AGG + chr1_1:51024263-51024282 Msa0026910:intron 45.0%
CTAAAGTCAAGACATGCCTC+AGG - chr1_1:51024298-51024317 None:intergenic 45.0%
! GACTCATCCCGACTTTAAGA+AGG + chr1_1:51024556-51024575 Msa0026910:CDS 45.0%
! TCCCGACTTTAAGAAGGCAA+AGG + chr1_1:51024562-51024581 Msa0026910:CDS 45.0%
!! AAGAAAGAAGGAGTGCCAGA+AGG + chr1_1:51024602-51024621 Msa0026910:CDS 45.0%
!! TATCGCTGCCGTCTTGTTTC+CGG - chr1_1:51020218-51020237 None:intergenic 50.0%
CTCAGCTTGCACTTCGATAC+CGG - chr1_1:51020345-51020364 None:intergenic 50.0%
TCAAGAGAGGTTGAAGCCTC+AGG + chr1_1:51020425-51020444 Msa0026910:CDS 50.0%
GGCGGAGGAAGATAGATCTA+AGG + chr1_1:51020455-51020474 Msa0026910:CDS 50.0%
!! GATGAGTGTTGGGAATCTGG+AGG + chr1_1:51020500-51020519 Msa0026910:CDS 50.0%
! GTTGGGCCGGAGTATTATGT+TGG + chr1_1:51020561-51020580 Msa0026910:CDS 50.0%
TAGACTGGGAATGGGAGTTG+TGG + chr1_1:51021309-51021328 Msa0026910:intron 50.0%
AACCGCAATTACAGTGTGGC+TGG - chr1_1:51021397-51021416 None:intergenic 50.0%
ATGCAGCGCAACTGAAGTGT+GGG + chr1_1:51021627-51021646 Msa0026910:intron 50.0%
!! GGACGGTTGAGAGTTGATAG+TGG + chr1_1:51021648-51021667 Msa0026910:intron 50.0%
GAAAGTCGAGAAGGCTCCTT+TGG + chr1_1:51022050-51022069 Msa0026910:CDS 50.0%
TTGGCATCAAGCCACCTAAG+GGG + chr1_1:51022169-51022188 Msa0026910:CDS 50.0%
AGCAAGGTCTTTCCTGTTCC+AGG - chr1_1:51022213-51022232 None:intergenic 50.0%
ATCTCTGTGTTTGGGGGGAT+TGG + chr1_1:51022514-51022533 Msa0026910:intron 50.0%
TTGAGTTTGCCACAGCCTGA+AGG - chr1_1:51022872-51022891 None:intergenic 50.0%
TTGATGCGGTCGGTACAAAG+AGG + chr1_1:51023024-51023043 Msa0026910:CDS 50.0%
AGGTATGATGCTCACTCAGG+TGG + chr1_1:51023177-51023196 Msa0026910:intron 50.0%
TCTAAGGGAACGCCGAATGA+AGG + chr1_1:51023636-51023655 Msa0026910:CDS 50.0%
!! GAGTTGGGGTGGATTGGTTA+TGG + chr1_1:51023768-51023787 Msa0026910:intron 50.0%
TTGTTGGAACTGGGAAGAGG+TGG - chr1_1:51023977-51023996 None:intergenic 50.0%
!!! GGGGTTTTAAAGAGGCACCA+AGG - chr1_1:51024143-51024162 None:intergenic 50.0%
!!! GCAGGCTTGGGGTTTTAAAG+AGG - chr1_1:51024151-51024170 None:intergenic 50.0%
GATCATCATACTTTCCCGCG+AGG + chr1_1:51024184-51024203 Msa0026910:intron 50.0%
ACACTGGAATCCTCCCAGTT+GGG - chr1_1:51024215-51024234 None:intergenic 50.0%
TGACAGGATATCTGAGCCTG+AGG + chr1_1:51024279-51024298 Msa0026910:intron 50.0%
ATGAACCGACAAGGCCATCC+CGG + chr1_1:51020189-51020208 Msa0026910:CDS 55.0%
ATTCGAACCAGCAGCACCAC+CGG + chr1_1:51020251-51020270 Msa0026910:CDS 55.0%
TGTTTACGACCTACACGCGC+CGG - chr1_1:51020273-51020292 None:intergenic 55.0%
TTCGATACCGGAGTCACCGT+CGG - chr1_1:51020333-51020352 None:intergenic 55.0%
! CGGTATCGAAGTGCAAGCTG+AGG + chr1_1:51020343-51020362 Msa0026910:CDS 55.0%
AGAGAGGTTGAAGCCTCAGG+AGG + chr1_1:51020428-51020447 Msa0026910:CDS 55.0%
GTTGAAGCCTCAGGAGGAGA+AGG + chr1_1:51020434-51020453 Msa0026910:CDS 55.0%
!! GCCGATGAGTGTTGGGAATC+TGG + chr1_1:51020497-51020516 Msa0026910:CDS 55.0%
GATGCAGCGCAACTGAAGTG+TGG + chr1_1:51021626-51021645 Msa0026910:intron 55.0%
AGCGCAACTGAAGTGTGGGA+CGG + chr1_1:51021631-51021650 Msa0026910:intron 55.0%
TGGCATCAAGCCACCTAAGG+GGG + chr1_1:51022170-51022189 Msa0026910:CDS 55.0%
GATCCAGCTTTGCTACGACC+TGG + chr1_1:51023309-51023328 Msa0026910:CDS 55.0%
GTTAGGGTTGTCTGTGGGTG+TGG + chr1_1:51023836-51023855 Msa0026910:intron 55.0%
TCATACTTTCCCGCGAGGGA+TGG + chr1_1:51024189-51024208 Msa0026910:intron 55.0%
GACACTGGAATCCTCCCAGT+TGG - chr1_1:51024216-51024235 None:intergenic 55.0%
CTTGTTTCCGGTCACCGGGA+TGG - chr1_1:51020206-51020225 None:intergenic 60.0%
!! CCGTCTTGTTTCCGGTCACC+GGG - chr1_1:51020210-51020229 None:intergenic 60.0%
CCCGGTGACCGGAAACAAGA+CGG + chr1_1:51020207-51020226 Msa0026910:CDS 60.0%
!! GCCGTCTTGTTTCCGGTCAC+CGG - chr1_1:51020211-51020230 None:intergenic 60.0%
GAAGCCTCAGGAGGAGAAGG+CGG + chr1_1:51020437-51020456 Msa0026910:CDS 60.0%
GTGGCTCGCCGATGAGTGTT+GGG + chr1_1:51020490-51020509 Msa0026910:CDS 60.0%
ATACTCCGGCCCAACCGAAC+TGG - chr1_1:51020556-51020575 None:intergenic 60.0%
GTGACTGGGAATGGGAGTCG+AGG + chr1_1:51021731-51021750 Msa0026910:intron 60.0%
GCTCTTGTGCCTTCAGGCTG+TGG + chr1_1:51022860-51022879 Msa0026910:intron 60.0%
CGACCAGGTCGTAGCAAAGC+TGG - chr1_1:51023315-51023334 None:intergenic 60.0%
! ATGCTAAGGGCGAGTTGGGG+TGG + chr1_1:51023757-51023776 Msa0026910:intron 60.0%
! AAGGGCGAGTTGGGGTGGAT+TGG + chr1_1:51023762-51023781 Msa0026910:intron 60.0%
!! CCTTGTCGGTTCATGCCGCC+GGG - chr1_1:51020183-51020202 None:intergenic 65.0%
!! GCCTTGTCGGTTCATGCCGC+CGG - chr1_1:51020184-51020203 None:intergenic 65.0%
!! GGTCACCGGGATGGCCTTGT+CGG - chr1_1:51020197-51020216 None:intergenic 65.0%
GACAAGGCCATCCCGGTGAC+CGG + chr1_1:51020196-51020215 Msa0026910:CDS 65.0%
TTACGACCTACACGCGCCGG+TGG - chr1_1:51020270-51020289 None:intergenic 65.0%
TCCTCCGCCTTCTCCTCCTG+AGG - chr1_1:51020444-51020463 None:intergenic 65.0%
CGTGGCTCGCCGATGAGTGT+TGG + chr1_1:51020489-51020508 Msa0026910:CDS 65.0%
CCCGGCGGCATGAACCGACA+AGG + chr1_1:51020180-51020199 Msa0026910:CDS 70.0%
GCCTCAGGAGGAGAAGGCGG+AGG + chr1_1:51020440-51020459 Msa0026910:CDS 70.0%
CCAGTTGGGCCATCCCTCGC+GGG - chr1_1:51024201-51024220 None:intergenic 70.0%
CCCAGTTGGGCCATCCCTCG+CGG - chr1_1:51024202-51024221 None:intergenic 70.0%
CCGCGAGGGATGGCCCAACT+GGG + chr1_1:51024199-51024218 Msa0026910:intron 70.0%
CGAGGGATGGCCCAACTGGG+AGG + chr1_1:51024202-51024221 Msa0026910:intron 70.0%
!! ACACGCGCCGGTGGTGCTGC+TGG - chr1_1:51020261-51020280 None:intergenic 75.0%
GCAGCACCACCGGCGCGTGT+AGG + chr1_1:51020261-51020280 Msa0026910:CDS 75.0%
CCCGCGAGGGATGGCCCAAC+TGG + chr1_1:51024198-51024217 Msa0026910:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 51020066 51024894 51020066 ID=Msa0026910;Name=Msa0026910
chr1_1 mRNA 51020066 51024894 51020066 ID=Msa0026910-mRNA-1;Parent=Msa0026910;Name=Msa0026910-mRNA-1;_AED=0.06;_eAED=0.06;_QI=99|1|1|1|1|1|6|257|446
chr1_1 exon 51020066 51020647 51020066 ID=Msa0026910-mRNA-1:exon:14845;Parent=Msa0026910-mRNA-1
chr1_1 exon 51021994 51022239 51021994 ID=Msa0026910-mRNA-1:exon:14846;Parent=Msa0026910-mRNA-1
chr1_1 exon 51022876 51023045 51022876 ID=Msa0026910-mRNA-1:exon:14847;Parent=Msa0026910-mRNA-1
chr1_1 exon 51023179 51023395 51023179 ID=Msa0026910-mRNA-1:exon:14848;Parent=Msa0026910-mRNA-1
chr1_1 exon 51023517 51023657 51023517 ID=Msa0026910-mRNA-1:exon:14849;Parent=Msa0026910-mRNA-1
chr1_1 exon 51024554 51024894 51024554 ID=Msa0026910-mRNA-1:exon:14850;Parent=Msa0026910-mRNA-1
chr1_1 five_prime_UTR 51020066 51020164 51020066 ID=Msa0026910-mRNA-1:five_prime_utr;Parent=Msa0026910-mRNA-1
chr1_1 CDS 51020165 51020647 51020165 ID=Msa0026910-mRNA-1:cds;Parent=Msa0026910-mRNA-1
chr1_1 CDS 51021994 51022239 51021994 ID=Msa0026910-mRNA-1:cds;Parent=Msa0026910-mRNA-1
chr1_1 CDS 51022876 51023045 51022876 ID=Msa0026910-mRNA-1:cds;Parent=Msa0026910-mRNA-1
chr1_1 CDS 51023179 51023395 51023179 ID=Msa0026910-mRNA-1:cds;Parent=Msa0026910-mRNA-1
chr1_1 CDS 51023517 51023657 51023517 ID=Msa0026910-mRNA-1:cds;Parent=Msa0026910-mRNA-1
chr1_1 CDS 51024554 51024637 51024554 ID=Msa0026910-mRNA-1:cds;Parent=Msa0026910-mRNA-1
chr1_1 three_prime_UTR 51024638 51024894 51024638 ID=Msa0026910-mRNA-1:three_prime_utr;Parent=Msa0026910-mRNA-1
Gene Sequence

>Msa0026910

ATGGGCCAAGGAACTCCCGGCGGCATGAACCGACAAGGCCATCCCGGTGACCGGAAACAAGACGGCAGCGATAAAAAAGAAAAGAAATTCGAACCAGCAGCACCACCGGCGCGTGTAGGTCGTAAACAACGCAAACAAAAGGGTCCGGATGCCGCTTCGCGGTTACCGACGGTGACTCCGGTATCGAAGTGCAAGCTGAGGCTGTTAAAGCTTGAGAGGGTGAAGGATTATTTGTTGATGGAGGAAGAGTTTGTTGCGTATCAAGAGAGGTTGAAGCCTCAGGAGGAGAAGGCGGAGGAAGATAGATCTAAGGTTGATGATCTACGTGGCTCGCCGATGAGTGTTGGGAATCTGGAGGAATTGATTGATGAGAATCATGCTATTGTTTCGAGTTCGGTTGGGCCGGAGTATTATGTTGGGATTTTATCTTTTGTTGATAAGGATCAATTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGGTTCTATCGGTTGTTGGTCTTCTGCAAGACGAAGTTGATCCAATGGTCTCAGTCATGAAAGTCGAGAAGGCTCCTTTGGAATCTTATGCTGACATTGGTGGTTTAGATGCGCAGATTCAGGAAATTAAAGAGGCAGTTGAGCTACCCCTTACACATCCTGAACTATATGAAGATATTGGCATCAAGCCACCTAAGGGGGTCATATTATATGGAGAACCTGGAACAGGAAAGACCTTGCTTGCAAAGGCTGTGGCAAACTCAACATCAGCTACATTCTTGCGTGTAGTAGGTAGTGAATTGATACAAAAGTACTTGGGAGATGGTCCAAAACTTGTGAGGGAACTTTTCAGAGTTGCCGATGATCTTTCTCCTGCTATTGTTTTCATTGATGAAATTGATGCGGTCGGTACAAAGAGGTATGATGCTCACTCAGGTGGAGAACGTGAAATTCAAAGGACTATGTTAGAGTTGCTGAACCAGTTAGATGGTTTTGATTCAAGAGGAGATGTAAAAGTGATTCTGGCTACCAACAGAATTGAAAGTCTTGATCCAGCTTTGCTACGACCTGGTCGTATTGATAGGAAGATTGAATTTCCTCTTCCTGATATCAAAACAAGAAGACGTATTTTCCAGATACACACATCAAGGATGACATTAGCTGATGATGTCAACTTGGAAGAATTTGTTATGACGAAGGATGAATTCTCTGGAGCTGATATAAAGGCAATATGTACTGAAGCTGGCTTACTTGCTCTAAGGGAACGCCGAATGAAGGTGACTCATCCCGACTTTAAGAAGGCAAAGGATAAAGTGATGTTTAAGAAGAAAGAAGGAGTGCCAGAAGGACTATATATGTGA
Protein sequence

>Msa0026910

MGQGTPGGMNRQGHPGDRKQDGSDKKEKKFEPAAPPARVGRKQRKQKGPDAASRLPTVTPVSKCKLRLLKLERVKDYLLMEEEFVAYQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPAIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKDKVMFKKKEGVPEGLYM*