AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0816710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0816710 MtrunA17_Chr5g0435301 93.636 1147 30 2 1 1147 1 1104 0.0 2213
Msa0816710 MtrunA17_Chr3g0111661 61.573 661 211 6 489 1147 5 624 0.0 788
Msa0816710 MtrunA17_Chr3g0111661 60.194 103 40 1 246 348 2 103 1.77e-30 129
Msa0816710 MtrunA17_Chr3g0111661 56.897 116 41 3 117 223 1 116 2.02e-29 125
Msa0816710 MtrunA17_Chr3g0111661 58.095 105 41 2 367 471 2 103 5.28e-28 121
Msa0816710 MtrunA17_Chr3g0111661 48.872 133 61 4 1 132 1 127 3.80e-26 115
Msa0816710 MtrunA17_Chr4g0001231 40.155 645 323 13 507 1146 22 608 2.91e-132 418
Msa0816710 MtrunA17_Chr4g0001231 41.121 107 52 4 25 121 24 129 9.66e-15 79.0
Msa0816710 MtrunA17_Chr4g0001231 44.048 84 41 3 136 214 24 106 1.41e-13 75.5
Msa0816710 MtrunA17_Chr4g0001231 41.860 86 45 2 267 348 22 106 2.06e-13 74.7
Msa0816710 MtrunA17_Chr4g0001231 43.421 76 40 2 388 463 22 94 1.54e-11 68.9
Msa0816710 MtrunA17_Chr4g0074301 39.231 650 332 13 504 1146 19 612 3.08e-132 418
Msa0816710 MtrunA17_Chr4g0074301 37.008 127 68 4 20 135 19 144 1.20e-15 82.0
Msa0816710 MtrunA17_Chr4g0074301 41.837 98 51 3 131 223 19 115 3.46e-15 80.5
Msa0816710 MtrunA17_Chr4g0074301 40.698 86 46 2 264 345 19 103 5.24e-14 76.6
Msa0816710 MtrunA17_Chr4g0070931 39.231 650 332 12 504 1146 19 612 9.04e-132 417
Msa0816710 MtrunA17_Chr4g0070931 35.433 127 70 3 20 135 19 144 2.41e-15 80.9
Msa0816710 MtrunA17_Chr4g0070931 40.816 98 52 3 131 223 19 115 1.31e-14 78.6
Msa0816710 MtrunA17_Chr4g0070931 39.130 92 49 3 264 351 19 107 3.59e-13 73.9
Msa0816710 MtrunA17_Chr2g0328251 35.746 677 368 20 518 1153 32 682 3.47e-109 358
Msa0816710 MtrunA17_Chr2g0328241 35.683 681 347 20 518 1153 32 666 8.07e-104 343
Msa0816710 MtrunA17_Chr4g0024031 33.433 667 373 20 518 1153 32 658 6.93e-93 313
Msa0816710 MtrunA17_Chr2g0327251 32.986 576 285 13 597 1153 63 556 2.11e-79 272
Msa0816710 MtrunA17_Chr4g0071151 46.296 270 112 5 919 1168 1 257 6.36e-64 218
Msa0816710 MtrunA17_Chr3g0111741 58.416 202 81 2 948 1147 123 323 2.64e-63 219
Msa0816710 MtrunA17_Chr2g0328231 47.107 242 102 8 931 1153 120 354 1.84e-54 194
Msa0816710 MtrunA17_Chr3g0111731 51.415 212 86 4 940 1147 1 199 3.60e-49 174
Msa0816710 MtrunA17_Chr4g0074271 32.452 416 226 9 504 912 36 403 5.56e-46 172
Msa0816710 MtrunA17_Chr4g0074271 36.800 125 64 5 20 133 36 156 1.01e-14 78.2
Msa0816710 MtrunA17_Chr4g0074271 40.816 98 52 3 131 223 36 132 2.82e-14 77.0
Msa0816710 MtrunA17_Chr4g0074271 55.556 63 28 0 1084 1146 379 441 3.74e-14 76.6
Msa0816710 MtrunA17_Chr4g0074271 39.535 86 47 2 264 345 36 120 3.50e-13 73.6
Msa0816710 MtrunA17_Chr3g0111691 62.712 59 22 0 1089 1147 17 75 1.87e-17 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0816710 AT3G48670.2 48.920 648 285 8 504 1147 24 629 0.0 598
Msa0816710 AT3G48670.2 51.042 96 47 0 264 359 24 119 2.77e-23 107
Msa0816710 AT3G48670.2 40.458 131 67 4 131 256 24 148 8.30e-19 92.8
Msa0816710 AT3G48670.2 49.451 91 45 1 25 114 29 119 3.90e-18 90.5
Msa0816710 AT3G48670.2 50.000 86 41 1 388 473 27 110 1.43e-16 85.5
Msa0816710 AT3G48670.1 48.920 648 285 8 504 1147 24 629 0.0 598
Msa0816710 AT3G48670.1 51.042 96 47 0 264 359 24 119 2.77e-23 107
Msa0816710 AT3G48670.1 40.458 131 67 4 131 256 24 148 8.30e-19 92.8
Msa0816710 AT3G48670.1 49.451 91 45 1 25 114 29 119 3.90e-18 90.5
Msa0816710 AT3G48670.1 50.000 86 41 1 388 473 27 110 1.43e-16 85.5
Msa0816710 AT3G48670.3 48.920 648 285 8 504 1147 24 629 0.0 598
Msa0816710 AT3G48670.3 51.042 96 47 0 264 359 24 119 2.77e-23 107
Msa0816710 AT3G48670.3 40.458 131 67 4 131 256 24 148 8.30e-19 92.8
Msa0816710 AT3G48670.3 49.451 91 45 1 25 114 29 119 3.90e-18 90.5
Msa0816710 AT3G48670.3 50.000 86 41 1 388 473 27 110 1.43e-16 85.5
Msa0816710 AT3G12550.4 44.613 659 312 11 504 1150 8 625 3.48e-180 544
Msa0816710 AT3G12550.4 48.718 78 40 0 268 345 12 89 3.11e-16 84.3
Msa0816710 AT3G12550.4 54.667 75 32 1 387 461 10 82 4.46e-14 77.4
Msa0816710 AT3G12550.4 52.857 70 32 1 25 93 13 82 1.78e-13 75.5
Msa0816710 AT3G12550.4 36.111 144 67 6 136 260 13 150 4.23e-13 74.3
Msa0816710 AT3G12550.2 44.613 659 312 11 504 1150 8 625 3.48e-180 544
Msa0816710 AT3G12550.2 48.718 78 40 0 268 345 12 89 3.11e-16 84.3
Msa0816710 AT3G12550.2 54.667 75 32 1 387 461 10 82 4.46e-14 77.4
Msa0816710 AT3G12550.2 52.857 70 32 1 25 93 13 82 1.78e-13 75.5
Msa0816710 AT3G12550.2 36.111 144 67 6 136 260 13 150 4.23e-13 74.3
Msa0816710 AT3G12550.1 44.613 659 312 11 504 1150 8 625 3.48e-180 544
Msa0816710 AT3G12550.1 48.718 78 40 0 268 345 12 89 3.11e-16 84.3
Msa0816710 AT3G12550.1 54.667 75 32 1 387 461 10 82 4.46e-14 77.4
Msa0816710 AT3G12550.1 52.857 70 32 1 25 93 13 82 1.78e-13 75.5
Msa0816710 AT3G12550.1 36.111 144 67 6 136 260 13 150 4.23e-13 74.3
Msa0816710 AT3G12550.5 44.529 658 313 11 504 1150 8 624 3.95e-180 544
Msa0816710 AT3G12550.5 48.718 78 40 0 268 345 12 89 3.11e-16 84.3
Msa0816710 AT3G12550.5 54.667 75 32 1 387 461 10 82 4.45e-14 77.4
Msa0816710 AT3G12550.5 52.857 70 32 1 25 93 13 82 1.81e-13 75.5
Msa0816710 AT3G12550.5 36.111 144 67 6 136 260 13 150 4.23e-13 74.3
Msa0816710 AT3G12550.3 43.248 585 281 10 504 1078 8 551 1.45e-151 468
Msa0816710 AT3G12550.3 48.718 78 40 0 268 345 12 89 3.68e-16 84.0
Msa0816710 AT3G12550.3 54.667 75 32 1 387 461 10 82 3.93e-14 77.4
Msa0816710 AT3G12550.3 52.857 70 32 1 25 93 13 82 1.49e-13 75.5
Msa0816710 AT3G12550.3 36.111 144 67 6 136 260 13 150 3.97e-13 74.3
Msa0816710 AT4G00380.1 37.697 634 344 11 517 1146 32 618 1.88e-122 392
Msa0816710 AT4G00380.3 37.697 634 344 11 517 1146 32 618 1.88e-122 392
Msa0816710 AT1G15910.1 36.916 642 354 11 509 1146 23 617 7.96e-122 390
Msa0816710 AT1G80790.1 37.846 650 348 15 503 1146 18 617 2.42e-114 370
Msa0816710 AT1G80790.1 39.394 99 55 3 263 358 18 114 5.99e-14 77.0
Msa0816710 AT1G80790.1 42.424 99 51 4 131 225 19 115 1.37e-13 75.9
Msa0816710 AT1G80790.1 37.500 112 61 4 20 130 19 122 3.82e-12 71.2
Msa0816710 AT1G80790.2 37.846 650 348 15 503 1146 18 617 2.42e-114 370
Msa0816710 AT1G80790.2 39.394 99 55 3 263 358 18 114 5.99e-14 77.0
Msa0816710 AT1G80790.2 42.424 99 51 4 131 225 19 115 1.37e-13 75.9
Msa0816710 AT1G80790.2 37.500 112 61 4 20 130 19 122 3.82e-12 71.2
Msa0816710 AT4G00380.2 35.489 634 330 10 517 1146 32 590 3.26e-109 356
Msa0816710 AT5G59390.2 37.112 547 300 8 609 1147 23 533 3.91e-106 346
Msa0816710 AT5G59390.4 37.112 547 300 8 609 1147 23 533 3.91e-106 346
Msa0816710 AT5G59390.3 37.112 547 300 8 609 1147 23 533 3.91e-106 346
Msa0816710 AT5G59390.1 37.477 547 303 9 609 1147 23 538 4.30e-106 346
Msa0816710 AT5G59390.5 37.477 547 303 9 609 1147 23 538 4.30e-106 346
Msa0816710 AT1G13790.2 38.662 538 292 7 615 1147 214 718 4.91e-106 351
Msa0816710 AT1G13790.2 47.143 70 36 1 267 336 13 81 6.21e-13 73.9
Msa0816710 AT1G13790.1 38.662 538 292 7 615 1147 214 718 4.91e-106 351
Msa0816710 AT1G13790.1 47.143 70 36 1 267 336 13 81 6.21e-13 73.9
Msa0816710 AT4G01180.1 36.643 554 281 12 615 1146 27 532 1.51e-103 339
Msa0816710 AT4G01780.1 38.857 525 170 8 625 1147 79 454 4.31e-102 332
Msa0816710 AT1G80790.3 34.615 468 253 12 503 966 18 436 1.38e-71 247
Msa0816710 AT1G80790.3 39.394 99 55 3 263 358 18 114 4.52e-14 76.6
Msa0816710 AT1G80790.3 42.424 99 51 4 131 225 19 115 1.16e-13 75.5
Msa0816710 AT1G80790.3 37.500 112 61 4 20 130 19 122 2.94e-12 70.9
Msa0816710 AT3G29375.3 43.787 169 89 2 979 1146 47 210 2.52e-36 138
Msa0816710 AT3G29375.1 43.787 169 89 2 979 1146 170 333 6.08e-36 140
Msa0816710 AT3G29375.2 39.604 101 55 2 979 1078 47 142 1.16e-14 73.9

Find 259 sgRNAs with CRISPR-Local

Find 525 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTTTGTTGAAATATT+TGG 0.084089 5_3:+51240998 Msa0816710:CDS
TTACGTTAGTGTACAAATTT+AGG 0.092870 5_3:-51246974 None:intergenic
AGTGCATCTCAAATAAATTT+AGG 0.161480 5_3:+51242045 Msa0816710:CDS
TTTGGCTTTGGTAAAATATT+TGG 0.168256 5_3:+51240502 Msa0816710:CDS
GTGCTTATGCTTATTCATTT+AGG 0.173507 5_3:+51246918 Msa0816710:CDS
TCTAGCTTTAGTGAAATATT+TGG 0.175657 5_3:+51243030 Msa0816710:CDS
TAGGAAATACATCATATATT+TGG 0.180378 5_3:+51246827 Msa0816710:CDS
GAACTCCTTAATCATGCTTT+AGG 0.201568 5_3:+51242956 Msa0816710:CDS
AAAGCCTGCAAATAAATATT+TGG 0.216840 5_3:+51243090 Msa0816710:CDS
GCATCTTGCTCCATGATTTC+AGG 0.219322 5_3:-51243568 None:intergenic
ACAACTTGGCATCTCTTTAA+TGG 0.221793 5_3:-51245250 None:intergenic
TTTGGTTAAATATTTGAAAA+AGG 0.226402 5_3:+51242272 Msa0816710:CDS
GAAATCCTTGAACACGCTTC+TGG 0.226592 5_3:+51241658 Msa0816710:CDS
TACTCCTCGGTTCAACATTA+TGG 0.232918 5_3:-51242756 None:intergenic
TGATGTACATGTTTATTAAA+TGG 0.236189 5_3:-51247008 None:intergenic
TCGTGCAGTTGAACATATTT+AGG 0.240961 5_3:+51246808 Msa0816710:CDS
CTTTCTTCAAATGGCTGCTT+TGG 0.246195 5_3:+51244456 Msa0816710:CDS
AACATATGAACAGCTCAAAA+AGG 0.257228 5_3:+51242080 Msa0816710:CDS
TAAGGGATGAATATCGAATA+AGG 0.278527 5_3:+51243278 Msa0816710:CDS
CATACTGCCCTAATAATAAA+AGG 0.282836 5_3:+51242145 Msa0816710:CDS
CAATCCCAGTGGCGTGATTA+AGG 0.288013 5_3:-51240433 None:intergenic
AACTCCTTAATCATGCTTTA+GGG 0.296371 5_3:+51242957 Msa0816710:CDS
ATTTAGGGGCTTAAAAGTTT+AGG 0.299326 5_3:-51246958 None:intergenic
TACGTTAGTGTACAAATTTA+GGG 0.309926 5_3:-51246973 None:intergenic
CTAAGAGAAAATGCAATTAT+AGG 0.311116 5_3:+51242927 Msa0816710:CDS
TATTTATTTGCAGGCTTTAA+CGG 0.314749 5_3:-51243085 None:intergenic
TTCTTCTCGGCTTTGTATCA+TGG 0.322336 5_3:-51241983 None:intergenic
ATTAGATTGTCACGGGAAAA+AGG 0.325818 5_3:+51243426 Msa0816710:CDS
CAAAGTGAAATTGAAATGTT+TGG 0.340775 5_3:+51238835 None:intergenic
TACAAAGTGAACAACATAAT+CGG 0.341908 5_3:+51243511 Msa0816710:CDS
GGTACATAACCTCGGAATTA+TGG 0.344195 5_3:+51245904 Msa0816710:CDS
TCCGAACGCTTTGGAATTCA+TGG 0.344635 5_3:+51243320 Msa0816710:CDS
CATTGAAAAGGCGGATCATC+TGG 0.344719 5_3:+51242248 Msa0816710:CDS
GATGCCAGTCAGGGTCCTTC+AGG 0.350160 5_3:-51245401 None:intergenic
CGAGATACCACCAACTCAAC+TGG 0.352569 5_3:-51240298 None:intergenic
GCTCTTTAATGATCAGAGTT+TGG 0.354729 5_3:-51245093 None:intergenic
CAACCATAAAAGCATGTTCT+AGG 0.355963 5_3:-51240929 None:intergenic
GTGCATCTCAAATAAATTTA+GGG 0.361894 5_3:+51242046 Msa0816710:CDS
GAAATCCTTGAACATGCTTC+CGG 0.365495 5_3:+51242192 Msa0816710:CDS
TTTAATGAAATATTTGAAAC+AGG 0.366788 5_3:+51241738 Msa0816710:CDS
AAGAAGCTATGGAGTTTGTT+TGG 0.370142 5_3:-51238902 None:intergenic
AAATCCTTGAACATGCTTCC+GGG 0.383309 5_3:+51242193 Msa0816710:CDS
TTCTTCATAGCTTCTAGAAA+TGG 0.384884 5_3:-51245315 None:intergenic
AAATCCTTGAACACGCTTCT+GGG 0.387945 5_3:+51241659 Msa0816710:CDS
CACGTAGAGTCCGAACGCTT+TGG 0.389644 5_3:+51243311 Msa0816710:CDS
GTGATTGAAGGTGATTCTTC+TGG 0.391219 5_3:+51241793 Msa0816710:CDS
CTACCCCTAAAGCATGATTA+AGG 0.393007 5_3:-51242961 None:intergenic
CAGTACTTTCAATCTCTTCA+AGG 0.398329 5_3:+51238956 Msa0816710:five_prime_UTR
CATTCTCTTCACACGAATAT+CGG 0.398883 5_3:-51245274 None:intergenic
TTCTGAACTGTGTTCGTTGT+GGG 0.399874 5_3:+51245371 Msa0816710:CDS
ATACAACCTGATGTTTCTCT+TGG 0.403573 5_3:-51245443 None:intergenic
GAAGGGTAGTCATTTGGCTT+TGG 0.407239 5_3:+51240490 Msa0816710:CDS
AACCGAGGAGTAACTGTAAC+AGG 0.408103 5_3:+51242767 Msa0816710:CDS
TGATGGAGAACATGATGTTC+TGG 0.410753 5_3:+51245000 Msa0816710:CDS
CAGAGAGAAGGCAACTCATC+TGG 0.411504 5_3:+51241714 Msa0816710:CDS
AATATTTCACTAAAGCTAGA+TGG 0.413692 5_3:-51243027 None:intergenic
CCGTCAAAGCCTGTTGATAA+AGG 0.414670 5_3:+51241047 Msa0816710:CDS
GAACAACAAGATAAAAGAAA+TGG 0.415980 5_3:+51243642 Msa0816710:CDS
CGACCCCAGAAGCGTGTTCA+AGG 0.420711 5_3:-51241663 None:intergenic
TGAGCCATAGAGTTTCTCTT+AGG 0.421507 5_3:-51240242 None:intergenic
TCTTACGAAGAACTCAAAAC+AGG 0.423431 5_3:+51240326 Msa0816710:CDS
ACCAATACATCGTCCATCTT+CGG 0.425204 5_3:-51243239 None:intergenic
TTATAATCCTGTTTCCTCTC+GGG 0.425867 5_3:-51240398 None:intergenic
TGAGTTGCGAAGAATTGAAC+TGG 0.427217 5_3:+51244032 Msa0816710:CDS
ATTCTGAAAGGCAGTTTGTA+TGG 0.427922 5_3:+51243176 Msa0816710:CDS
TGAAAGGCTTAAGTTGCAAC+TGG 0.428021 5_3:+51243990 Msa0816710:CDS
AAGGGATGAATATCGAATAA+GGG 0.428069 5_3:+51243279 Msa0816710:CDS
TCAGGATCACCTTTATCAAC+AGG 0.428145 5_3:-51241056 None:intergenic
GCAAAGTGGCAAGCTGATAA+TGG 0.428870 5_3:+51244829 Msa0816710:CDS
ACAAAGTGAACAACATAATC+GGG 0.432317 5_3:+51243512 Msa0816710:CDS
CTAATAATAAAAGGATAAAA+CGG 0.432980 5_3:+51242154 Msa0816710:CDS
CTTATAATCCTGTTTCCTCT+CGG 0.434843 5_3:-51240399 None:intergenic
CCTTTATCAACAGGCTTTGA+CGG 0.436764 5_3:-51241047 None:intergenic
CAGTTTGTATGGCCATGGAC+TGG 0.437249 5_3:+51243187 Msa0816710:CDS
CCATGCTCTAACAAGGATAC+TGG 0.439675 5_3:+51241490 Msa0816710:CDS
TAAAGAGAAGGGTAGTCATT+TGG 0.439933 5_3:+51240484 Msa0816710:CDS
TTTAGTGAAATATTTGGAAA+AGG 0.440221 5_3:+51243036 Msa0816710:CDS
TTTGTTGAAATATTTGGAAA+AGG 0.440273 5_3:+51241004 Msa0816710:CDS
TACATACCACCAACTTATAT+CGG 0.440647 5_3:-51240793 None:intergenic
TCGATATTCATCCCTTAGCT+TGG 0.441585 5_3:-51243272 None:intergenic
GAAACTTGCTGCAGATCAAA+AGG 0.442473 5_3:+51244507 Msa0816710:CDS
CCTTTCTTCGTTGGTTCTGA+AGG 0.442569 5_3:-51242315 None:intergenic
CGAGCCTAAGAGAAACTCTA+TGG 0.443939 5_3:+51240238 Msa0816710:exon
ACCGAAGATGGACGATGTAT+TGG 0.444273 5_3:+51243238 Msa0816710:CDS
GAAAACAGGATTATTTGTAC+AGG 0.444980 5_3:+51240901 Msa0816710:CDS
TACATCGTCCATCTTCGGTT+TGG 0.445208 5_3:-51243234 None:intergenic
CTCTCTTAAATCTATATGTA+AGG 0.449418 5_3:-51245035 None:intergenic
CTTGAACATGCTTCCGGGGT+GGG 0.449618 5_3:+51242198 Msa0816710:CDS
AAAGGCGGATCATCTGGCTT+TGG 0.451279 5_3:+51242254 Msa0816710:CDS
TAATGCATTGGCATTTGAAA+GGG 0.456436 5_3:+51243396 Msa0816710:CDS
CGATATTCGTGTGAAGAGAA+TGG 0.458047 5_3:+51245275 Msa0816710:CDS
CGCACAAAGGAGAAGTGTAT+TGG 0.458889 5_3:+51242994 Msa0816710:CDS
TAAAACAATACCTGAAATCA+TGG 0.459539 5_3:+51243558 Msa0816710:CDS
TAATAATAAAAGGATAAAAC+GGG 0.460262 5_3:+51242155 Msa0816710:CDS
CTTATGCTTATTCATTTAGG+TGG 0.462337 5_3:+51246921 Msa0816710:CDS
CTTAATCACGCCACTGGGAT+TGG 0.464439 5_3:+51240434 Msa0816710:CDS
GATATTCGTGTGAAGAGAAT+GGG 0.465670 5_3:+51245276 Msa0816710:CDS
GAGATATCACCTTTCTTCGT+TGG 0.466608 5_3:-51242324 None:intergenic
TCAACAGGCTTTGACGGTCC+AGG 0.467518 5_3:-51241041 None:intergenic
CCATCTTCGGTTTGGCTAGT+GGG 0.472690 5_3:-51243226 None:intergenic
GAATTCCACGACTGCAGCTC+CGG 0.474916 5_3:-51243350 None:intergenic
TAAAGTAGAGACATAATTTG+CGG 0.475865 5_3:+51247202 Msa0816710:three_prime_UTR
TCATGGAGCAAGATGCTAGA+AGG 0.477506 5_3:+51243575 Msa0816710:CDS
CCATCAAAACCTGTGATTGA+AGG 0.482216 5_3:+51241781 Msa0816710:CDS
CCACCCCGGAAGCATGTTCA+AGG 0.482301 5_3:-51242197 None:intergenic
AGTTTGTATGGCCATGGACT+GGG 0.482657 5_3:+51243188 Msa0816710:CDS
ATTTCCCTGTACACATAGTC+CGG 0.484237 5_3:-51241640 None:intergenic
AACATGCTTCCGGGGTGGGT+TGG 0.485541 5_3:+51242202 Msa0816710:CDS
ATATCGCAAACAGCAGGATC+AGG 0.485842 5_3:-51241074 None:intergenic
GTGAAAGTGGTTCCAAGCTA+AGG 0.486424 5_3:+51243260 Msa0816710:CDS
GTACTGCCCTAATAGAAAAC+AGG 0.487367 5_3:+51240887 Msa0816710:CDS
TGAAGTAGAGACATAATTTG+TGG 0.488702 5_3:+51247146 Msa0816710:three_prime_UTR
CACTTTGTAGTCATCAGCTC+GGG 0.488748 5_3:-51243497 None:intergenic
TCCATCTTCGGTTTGGCTAG+TGG 0.489016 5_3:-51243227 None:intergenic
CCCATGAATTCCAAAGCGTT+CGG 0.491200 5_3:-51243321 None:intergenic
AAGAGAAGTGCTAAAGAGAA+GGG 0.491974 5_3:+51240473 Msa0816710:CDS
CGGGGAACAACTACAAAAGA+TGG 0.492436 5_3:+51243531 Msa0816710:CDS
AAGGAAAACCTAATCTCATT+CGG 0.495521 5_3:+51244611 Msa0816710:CDS
TGAAATTGAAGAAGAAGCTA+TGG 0.496867 5_3:-51238913 None:intergenic
ATAATGCATTGGCATTTGAA+AGG 0.498302 5_3:+51243395 Msa0816710:CDS
CTTGATACTTCAAGCTTCTG+TGG 0.498905 5_3:+51246855 Msa0816710:CDS
CCCACTAGCCAAACCGAAGA+TGG 0.498943 5_3:+51243226 Msa0816710:CDS
AGAGACATAATTTGTGGTGG+TGG 0.499578 5_3:+51247152 Msa0816710:three_prime_UTR
AACAGATCACCTTGATCTAT+AGG 0.502355 5_3:-51240560 None:intergenic
ATCCTATGCAGAACTCAAGA+AGG 0.503990 5_3:+51242853 Msa0816710:CDS
GGAGCAAGATCTTAACAGTA+AGG 0.504956 5_3:+51240523 Msa0816710:CDS
AAGGATATTACGAGTATGCC+TGG 0.507027 5_3:+51241023 Msa0816710:CDS
CGGAATCCCAGTTGAGTTGG+TGG 0.507450 5_3:+51240291 Msa0816710:CDS
CCTTCAGAACCAACGAAGAA+AGG 0.509478 5_3:+51242315 Msa0816710:CDS
GAATTCAATAAAAGTTGGCT+AGG 0.509642 5_3:+51243367 Msa0816710:CDS
GAACTCCTTAATCACGCCAC+TGG 0.510955 5_3:+51240428 Msa0816710:CDS
GAGGTTATGTACCGCCCACT+TGG 0.513287 5_3:-51245894 None:intergenic
AGTACCTGAAGGACCCTGAC+TGG 0.513631 5_3:+51245397 Msa0816710:CDS
TCACTTTGTAGTCATCAGCT+CGG 0.514205 5_3:-51243498 None:intergenic
TAAAACGGGATTACGTGTAC+AGG 0.516022 5_3:+51242169 Msa0816710:CDS
TGTTTCCTCTCGGGGCAGTA+CGG 0.517605 5_3:-51240389 None:intergenic
CTTAATCATGCTTTAGGGGT+AGG 0.519030 5_3:+51242962 Msa0816710:CDS
GTACTGCCCCGAGAGGAAAC+AGG 0.521545 5_3:+51240391 Msa0816710:CDS
TCACACCGGAGCTGCAGTCG+TGG 0.521875 5_3:+51243345 Msa0816710:CDS
GCTAGGGTTATATAATGCAT+TGG 0.522455 5_3:+51243384 Msa0816710:CDS
TATGGCTCACTGCTCTATCA+AGG 0.523383 5_3:+51240256 Msa0816710:exon
CAACTGGGATTCCGCTATAC+CGG 0.523963 5_3:-51240282 None:intergenic
ACTTCGCATGGACATTGTGA+TGG 0.524468 5_3:+51243687 Msa0816710:CDS
ACATGATGTTCTGGATATGA+TGG 0.527724 5_3:+51245009 Msa0816710:CDS
AATGTCTCACTGTTCTATCA+AGG 0.528960 5_3:+51240767 Msa0816710:CDS
CAATGAAATTACACTTCGCA+TGG 0.529219 5_3:+51243675 Msa0816710:CDS
TACAATCCAAGAGAAACATC+AGG 0.529753 5_3:+51245437 Msa0816710:CDS
ATGAAGCACATGGAAGATGA+TGG 0.530575 5_3:+51244983 Msa0816710:CDS
GAAGAGAAGTGCTAAAGAGA+AGG 0.536675 5_3:+51240472 Msa0816710:CDS
CTTGAACACGCTTCTGGGGT+CGG 0.536954 5_3:+51241664 Msa0816710:CDS
CCGAACGCTTTGGAATTCAT+GGG 0.537115 5_3:+51243321 Msa0816710:CDS
GGAAAACAATCTTATGAATG+TGG 0.540930 5_3:+51243111 Msa0816710:CDS
ACATACAACCAACTTATTCG+AGG 0.540968 5_3:-51241523 None:intergenic
AACTCCTTAATCACGCCACT+GGG 0.545333 5_3:+51240429 Msa0816710:CDS
TGAGACATTACTGTTTGTCC+TGG 0.545678 5_3:-51240753 None:intergenic
AAAGGCAGTTTGTATGGCCA+TGG 0.546980 5_3:+51243182 Msa0816710:CDS
GAAGAATCACCTTCAATCAC+AGG 0.550222 5_3:-51241790 None:intergenic
GAATGAACTGAGAAACGAGA+TGG 0.550613 5_3:+51245815 Msa0816710:CDS
ACTCAAAACAGGGAAACAAA+AGG 0.551178 5_3:+51240337 Msa0816710:CDS
CACTGCTCTATCAAGGATAC+CGG 0.553781 5_3:+51240263 Msa0816710:CDS
CTTCTGAACTGTGTTCGTTG+TGG 0.553927 5_3:+51245370 Msa0816710:CDS
CGTGGTATATCGCAAACAGC+AGG 0.554038 5_3:-51241080 None:intergenic
ACACGAATATCGGCACAACT+TGG 0.554139 5_3:-51245264 None:intergenic
TAAGAGCAATGATGAACTGC+AGG 0.555224 5_3:+51245117 Msa0816710:CDS
CCAGTATCCTTGTTAGAGCA+TGG 0.557823 5_3:-51241490 None:intergenic
AACTAGAACTGACATTGAAA+AGG 0.558417 5_3:+51242236 Msa0816710:CDS
TTGGAGATTCAGCAACTAAG+AGG 0.559634 5_3:+51244947 Msa0816710:CDS
AAAATCCGGTCTTTATGCGT+GGG 0.559938 5_3:+51243471 Msa0816710:CDS
CAAGATCTTAACAGTAAGGA+TGG 0.560367 5_3:+51240527 Msa0816710:CDS
TCCCTTCTTGAGTTCTGCAT+AGG 0.560982 5_3:-51242855 None:intergenic
TCAAGGATACCGATATAAGT+TGG 0.561942 5_3:+51240784 Msa0816710:CDS
TCGTGGAATTCAATAAAAGT+TGG 0.562060 5_3:+51243362 Msa0816710:CDS
GGCAACCCACGCATAAAGAC+CGG 0.562276 5_3:-51243476 None:intergenic
CGGAATGTGAAAACCTCAGA+CGG 0.562795 5_3:+51240849 Msa0816710:CDS
ACATATAGATTTAAGAGAGA+AGG 0.562950 5_3:+51245039 Msa0816710:CDS
CAAAGCGTTCGGACTCTACG+TGG 0.565277 5_3:-51243310 None:intergenic
AAGAGAGCGACTTTGCAAGA+AGG 0.565508 5_3:+51245942 Msa0816710:CDS
CACGGCTCCATGCTCTAACA+AGG 0.565992 5_3:+51241483 Msa0816710:CDS
GCATCGAGACCTATAGATCA+AGG 0.566792 5_3:+51240551 Msa0816710:CDS
GGAACAGTCACTTCGAGACA+TGG 0.568492 5_3:+51245060 Msa0816710:CDS
ACAACTGAAACTCTCGGCCG+AGG 0.569131 5_3:-51240366 None:intergenic
GGTACAAAATTGATAAGTCA+AGG 0.572412 5_3:+51241451 Msa0816710:intron
AATGAACTGAGAAACGAGAT+GGG 0.572599 5_3:+51245816 Msa0816710:CDS
TCCTATGCAGAACTCAAGAA+GGG 0.574413 5_3:+51242854 Msa0816710:CDS
ATAAATGAATATAATCCAAG+TGG 0.576645 5_3:+51245879 Msa0816710:CDS
CCTTGAACATGCTTCCGGGG+TGG 0.576708 5_3:+51242197 Msa0816710:CDS
CTTCGCATGGACATTGTGAT+GGG 0.577002 5_3:+51243688 Msa0816710:CDS
TGAACTGCAGGAAGCTCGAA+AGG 0.577266 5_3:+51245129 Msa0816710:CDS
TATAATCCTGTTTCCTCTCG+GGG 0.577529 5_3:-51240397 None:intergenic
TAGCGGAATCCCAGTTGAGT+TGG 0.580792 5_3:+51240288 Msa0816710:CDS
CGTATGAATTAGATTGTCAC+GGG 0.582967 5_3:+51243419 Msa0816710:CDS
TTTCACTAAAGCTAGATGGT+TGG 0.583028 5_3:-51243023 None:intergenic
AAAGAGAGGTATCAGAGAGA+AGG 0.584942 5_3:+51241702 Msa0816710:CDS
CAAGTGATCCTCGAATAAGT+TGG 0.585633 5_3:+51241515 Msa0816710:CDS
GGATCTTATGACTATGAATG+TGG 0.586587 5_3:+51243057 Msa0816710:CDS
GACCTGTTACAGTTACTCCT+CGG 0.587093 5_3:-51242769 None:intergenic
TGAAAGTGGTTCCAAGCTAA+GGG 0.589876 5_3:+51243261 Msa0816710:CDS
AAGGAGAAGTGTATTGGAGA+AGG 0.590402 5_3:+51243000 Msa0816710:CDS
GCGTATGAATTAGATTGTCA+CGG 0.591099 5_3:+51243418 Msa0816710:CDS
AATCCTTGAACACGCTTCTG+GGG 0.591372 5_3:+51241660 Msa0816710:CDS
GGACGATGTATTGGTGAAAG+TGG 0.596980 5_3:+51243247 Msa0816710:CDS
ATGGCCATGGACTGGGATTG+TGG 0.600977 5_3:+51243195 Msa0816710:CDS
AAGCATAAGCACAAAGCTTG+TGG 0.603020 5_3:-51246907 None:intergenic
AGGGATGAATATCGAATAAG+GGG 0.603595 5_3:+51243280 Msa0816710:CDS
AATTCAATAAAAGTTGGCTA+GGG 0.604156 5_3:+51243368 Msa0816710:CDS
CAGAGTAGTTCGCAAAAGAG+AGG 0.606428 5_3:+51241688 Msa0816710:CDS
ACTCCTTAATCATGCTTTAG+GGG 0.612063 5_3:+51242958 Msa0816710:CDS
ACATTCTTGTCAATTCTGAA+AGG 0.612702 5_3:+51243164 Msa0816710:CDS
AACAGTCTTAGTCAGCAAAG+TGG 0.613120 5_3:+51244815 Msa0816710:intron
GTTACGAACACAATAAGTCC+AGG 0.613921 5_3:+51240735 Msa0816710:intron
TGGAATTCATGGGGTCACAC+CGG 0.616709 5_3:+51243331 Msa0816710:CDS
TTTACCACAATCCCAGTCCA+TGG 0.617946 5_3:-51243199 None:intergenic
ACGTTAGTGTACAAATTTAG+GGG 0.618876 5_3:-51246972 None:intergenic
GGAATGTGAAAACCTCAGAC+GGG 0.619496 5_3:+51240850 Msa0816710:CDS
AGGCACGTAATGAAAGTGAA+AGG 0.620125 5_3:+51244064 Msa0816710:CDS
AGGATACCGATATAAGTTGG+TGG 0.620895 5_3:+51240787 Msa0816710:CDS
TTGACTATCTATTTATCCAG+CGG 0.621124 5_3:+51244855 Msa0816710:CDS
AATCCTTGAACATGCTTCCG+GGG 0.621612 5_3:+51242194 Msa0816710:CDS
TGCGTAATTCCATAATTCCG+AGG 0.622277 5_3:-51245913 None:intergenic
AACAGGTCACCTCTCTGAGA+AGG 0.622552 5_3:+51242784 Msa0816710:CDS
GAGATACCACCAACTCAACT+GGG 0.622653 5_3:-51240297 None:intergenic
ATCACGCCACTGGGATTGGT+AGG 0.628943 5_3:+51240438 Msa0816710:CDS
CTTACGAAGAACTCAAAACA+GGG 0.629180 5_3:+51240327 Msa0816710:CDS
CAAAGTGAGAATCTCAGATG+AGG 0.630595 5_3:+51241582 Msa0816710:CDS
CGAAGAAGTTTACAAAGCTG+TGG 0.631485 5_3:+51245839 Msa0816710:CDS
TAGAACTGACATTGAAAAGG+CGG 0.632651 5_3:+51242239 Msa0816710:CDS
CTTGCTCAATCTCACAGTCA+AGG 0.633620 5_3:+51243724 Msa0816710:CDS
TAAATGAATATAATCCAAGT+GGG 0.634711 5_3:+51245880 Msa0816710:CDS
AAAACAGGATTATTTGTACA+GGG 0.638147 5_3:+51240902 Msa0816710:CDS
GAATTATGGAATTACGCAGA+GGG 0.640718 5_3:+51245918 Msa0816710:CDS
TATCAAGGATACCGGTATAG+CGG 0.641173 5_3:+51240271 Msa0816710:CDS
TGAGATACTCCAACCCACCC+CGG 0.643091 5_3:-51242211 None:intergenic
TAGGTCAAAGTGACGCACAA+AGG 0.645388 5_3:+51242981 Msa0816710:CDS
AAAACCGGACTATGTGTACA+GGG 0.646630 5_3:+51241636 Msa0816710:CDS
AGAAGTTTACAAAGCTGTGG+TGG 0.648609 5_3:+51245842 Msa0816710:CDS
CGAACGCTTTGGAATTCATG+GGG 0.651514 5_3:+51243322 Msa0816710:CDS
GATACTTCAAGCTTCTGTGG+AGG 0.653683 5_3:+51246858 Msa0816710:CDS
AAGGATCTTATAAATGTCGG+TGG 0.656155 5_3:+51242291 Msa0816710:CDS
CTGCTGTTTGCGATATACCA+CGG 0.657859 5_3:+51241081 Msa0816710:CDS
ATATTCGTGTGAAGAGAATG+GGG 0.660732 5_3:+51245277 Msa0816710:CDS
GCATATGAAAGTCCCGTCTG+AGG 0.662282 5_3:-51240862 None:intergenic
TATTAGCATCCTTCTCAGAG+AGG 0.663538 5_3:-51242793 None:intergenic
AAGTGGGCGGTACATAACCT+CGG 0.665757 5_3:+51245896 Msa0816710:CDS
GTACGGACAACTGAAACTCT+CGG 0.669727 5_3:-51240372 None:intergenic
ACTAAACGTCATGAAGCACA+TGG 0.672492 5_3:+51244973 Msa0816710:CDS
AAGTCAAGGACAAACTGTCA+CGG 0.680760 5_3:+51241465 Msa0816710:CDS
AAAACGGGATTACGTGTACA+GGG 0.683449 5_3:+51242170 Msa0816710:CDS
CAAAGTGAACAACATAATCG+GGG 0.685217 5_3:+51243513 Msa0816710:CDS
ATGAATATAATCCAAGTGGG+CGG 0.689994 5_3:+51245883 Msa0816710:CDS
ACTCAAGAAGGGAATTCACA+AGG 0.692986 5_3:+51242865 Msa0816710:CDS
GCAAGTGAAAGTCTTATCTG+AGG 0.693684 5_3:-51242121 None:intergenic
AGTAGAGACATAATTTGTGG+TGG 0.696631 5_3:+51247149 Msa0816710:three_prime_UTR
GGAATTATGGAATTACGCAG+AGG 0.702790 5_3:+51245917 Msa0816710:CDS
GTTGGATGAAGAGATTAACA+AGG 0.706574 5_3:+51244092 Msa0816710:CDS
GTTGTCCGTACTGCCCCGAG+AGG 0.713527 5_3:+51240384 Msa0816710:CDS
GTTGTGGGAAGAGTACCTGA+AGG 0.717510 5_3:+51245386 Msa0816710:CDS
GGCACCATAATGTTGAACCG+AGG 0.724080 5_3:+51242752 Msa0816710:intron
TATTCGTGTGAAGAGAATGG+GGG 0.746922 5_3:+51245278 Msa0816710:CDS
ACTACTCCTACCAATCCCAG+TGG 0.798910 5_3:-51240444 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAGAAAATAAAGAAAT+GGG - chr5_3:51239050-51239069 None:intergenic 15.0%
!! TAATGTAGAAAATAAAGAAA+TGG - chr5_3:51239051-51239070 None:intergenic 15.0%
!!! TTTTTTTTTACAAGAAATGA+AGG + chr5_3:51240098-51240117 Msa0816710:intron 15.0%
!!! ACAATATTAATCAGTTTTAT+TGG - chr5_3:51240641-51240660 None:intergenic 15.0%
!!! TTCTAGTTAATATATTTTTC+TGG + chr5_3:51241115-51241134 Msa0816710:intron 15.0%
!!! TCTAGTTAATATATTTTTCT+GGG + chr5_3:51241116-51241135 Msa0816710:intron 15.0%
!! ACTATATATAAAAGAGATAT+CGG + chr5_3:51241188-51241207 Msa0816710:intron 15.0%
!!! TTTAATGAAATATTTGAAAC+AGG + chr5_3:51241738-51241757 Msa0816710:CDS 15.0%
!! AATATCATAGTTAATTGAAT+TGG - chr5_3:51241883-51241902 None:intergenic 15.0%
!! ATTCAATTAACTATGATATT+TGG + chr5_3:51241883-51241902 Msa0816710:intron 15.0%
!!! AAAACAATATTTTGTTTTTC+AGG + chr5_3:51241958-51241977 Msa0816710:intron 15.0%
!!! GTTTTATCCTTTTATTATTA+GGG - chr5_3:51242155-51242174 None:intergenic 15.0%
!! CTAATAATAAAAGGATAAAA+CGG + chr5_3:51242154-51242173 Msa0816710:CDS 15.0%
!! TAATAATAAAAGGATAAAAC+GGG + chr5_3:51242155-51242174 Msa0816710:CDS 15.0%
!! TTTGGTTAAATATTTGAAAA+AGG + chr5_3:51242272-51242291 Msa0816710:CDS 15.0%
!!! AATGGGATAATAAATTTTAA+GGG + chr5_3:51242550-51242569 Msa0816710:intron 15.0%
!!! ATAAATTTTAAGGGTATTAT+AGG + chr5_3:51242559-51242578 Msa0816710:intron 15.0%
!! AAAGTGAAAATATTGTTTAA+GGG + chr5_3:51244186-51244205 Msa0816710:intron 15.0%
!! ATTCTTCAATAATAATGATA+CGG + chr5_3:51244357-51244376 Msa0816710:intron 15.0%
!! AAGCATTAAAACAAATTATA+CGG - chr5_3:51244534-51244553 None:intergenic 15.0%
!!! GCTATTTCTATAATAAATAA+AGG + chr5_3:51246243-51246262 Msa0816710:intron 15.0%
!! ATGTAGAAAATAAAGAAATG+GGG - chr5_3:51239049-51239068 None:intergenic 20.0%
!! AAGACATAATTGAAGTTTAA+AGG - chr5_3:51239098-51239117 None:intergenic 20.0%
!!! TTTTGCCTTAATTAATTCAT+TGG + chr5_3:51239162-51239181 Msa0816710:intron 20.0%
!!! AATTAACTTGAAATGGTTTA+AGG + chr5_3:51239220-51239239 Msa0816710:intron 20.0%
!!! ATTAACTTGAAATGGTTTAA+GGG + chr5_3:51239221-51239240 Msa0816710:intron 20.0%
!! ATACTTAATGTTGAGTTATA+AGG + chr5_3:51239320-51239339 Msa0816710:intron 20.0%
!!! TTAAGTTGATTATCCAAATT+GGG - chr5_3:51239362-51239381 None:intergenic 20.0%
!!! ATTAAGTTGATTATCCAAAT+TGG - chr5_3:51239363-51239382 None:intergenic 20.0%
!! ATTTAGTGAATTTAAGTCAT+TGG + chr5_3:51239631-51239650 Msa0816710:intron 20.0%
!! ATCTGAGAAGTTATTAAAAA+CGG - chr5_3:51239718-51239737 None:intergenic 20.0%
!!! TTTTTAATAACTTCTCAGAT+TGG + chr5_3:51239718-51239737 Msa0816710:intron 20.0%
!!! TTTTGAATATAGAATTGCAT+TGG - chr5_3:51240062-51240081 None:intergenic 20.0%
!! AATATTAGTATTCGTTGTTT+AGG - chr5_3:51240185-51240204 None:intergenic 20.0%
!!! AATATTGATTTTTGTCTTTC+AGG + chr5_3:51240199-51240218 Msa0816710:intron 20.0%
!!! TTTTGATTAAATTATTTGCC+TGG + chr5_3:51240664-51240683 Msa0816710:intron 20.0%
!!! AATAATCCTGTTTTCTATTA+GGG - chr5_3:51240896-51240915 None:intergenic 20.0%
!!! AAATAATCCTGTTTTCTATT+AGG - chr5_3:51240897-51240916 None:intergenic 20.0%
!! TTTGTTGAAATATTTGGAAA+AGG + chr5_3:51241004-51241023 Msa0816710:CDS 20.0%
!! AAAATAATATCACTGTGAAA+TGG - chr5_3:51241164-51241183 None:intergenic 20.0%
!! CTATATATAAAAGAGATATC+GGG + chr5_3:51241189-51241208 Msa0816710:intron 20.0%
!!! CGTTTTATCCTTTTATTATT+AGG - chr5_3:51242156-51242175 None:intergenic 20.0%
!! AAAAAGGATCTTATAAATGT+CGG + chr5_3:51242288-51242307 Msa0816710:CDS 20.0%
!!! GAATGGGATAATAAATTTTA+AGG + chr5_3:51242549-51242568 Msa0816710:intron 20.0%
!! AATGACAAATAAAGAAACAA+AGG + chr5_3:51242623-51242642 Msa0816710:intron 20.0%
!! ATGACAAATAAAGAAACAAA+GGG + chr5_3:51242624-51242643 Msa0816710:intron 20.0%
!!! TATAATTGCATTTTCTCTTA+GGG - chr5_3:51242928-51242947 None:intergenic 20.0%
!! TTTAGTGAAATATTTGGAAA+AGG + chr5_3:51243036-51243055 Msa0816710:CDS 20.0%
!!! TTTTCCAAATATTTATTTGC+AGG - chr5_3:51243097-51243116 None:intergenic 20.0%
!! CAAAGTGAAAATATTGTTTA+AGG + chr5_3:51244185-51244204 Msa0816710:intron 20.0%
!! GAAAAAAAGAGGAAAAAAAA+TGG - chr5_3:51244253-51244272 None:intergenic 20.0%
!!! AATAAATAATGCCAAACTTT+TGG - chr5_3:51244322-51244341 None:intergenic 20.0%
!!! AATGCTTTTTTAATATCCAA+AGG + chr5_3:51244547-51244566 Msa0816710:intron 20.0%
!!! TGGATTGTAGAAATTTTAAA+TGG - chr5_3:51245426-51245445 None:intergenic 20.0%
!! ATAAATGAATATAATCCAAG+TGG + chr5_3:51245879-51245898 Msa0816710:CDS 20.0%
!! TAAATGAATATAATCCAAGT+GGG + chr5_3:51245880-51245899 Msa0816710:CDS 20.0%
!!! TAAAATTGGAATTTTGAGAA+AGG - chr5_3:51246132-51246151 None:intergenic 20.0%
!! TGTTGTGAATACTATAAAAT+TGG - chr5_3:51246146-51246165 None:intergenic 20.0%
!! CAAAATCAAGTTAATCAATT+AGG - chr5_3:51246478-51246497 None:intergenic 20.0%
!!! AACTTGATTTTGAGTATAAT+TGG + chr5_3:51246486-51246505 Msa0816710:intron 20.0%
!! TAGGAAATACATCATATATT+TGG + chr5_3:51246827-51246846 Msa0816710:CDS 20.0%
!! TGATGTACATGTTTATTAAA+TGG - chr5_3:51247011-51247030 None:intergenic 20.0%
! CACATCCAATGAATTAATTA+AGG - chr5_3:51239170-51239189 None:intergenic 25.0%
!! GATGGATAATTAACTTGAAA+TGG + chr5_3:51239213-51239232 Msa0816710:intron 25.0%
!! TTGAAAGTTATACCTGTTTT+AGG + chr5_3:51240019-51240038 Msa0816710:intron 25.0%
!!! TTTGGCTTTGGTAAAATATT+TGG + chr5_3:51240502-51240521 Msa0816710:CDS 25.0%
! AAAACAGGATTATTTGTACA+GGG + chr5_3:51240902-51240921 Msa0816710:CDS 25.0%
!! TCTTGCTTTGTTGAAATATT+TGG + chr5_3:51240998-51241017 Msa0816710:CDS 25.0%
!! ATTTTTCTGGGTAATTGAAT+AGG + chr5_3:51241128-51241147 Msa0816710:intron 25.0%
!! AAAACTAACTTTTGTCTTTC+AGG + chr5_3:51241430-51241449 Msa0816710:intron 25.0%
!! TTTTATCAAGAACTCAAGAA+TGG + chr5_3:51241553-51241572 Msa0816710:CDS 25.0%
! TTAATTGAATTGGTCAAAGT+CGG - chr5_3:51241873-51241892 None:intergenic 25.0%
!! TTTTATCAAAGCTTAACAGT+CGG + chr5_3:51241931-51241950 Msa0816710:intron 25.0%
!! ACTTTTATCAGAATCTTTGT+CGG - chr5_3:51242028-51242047 None:intergenic 25.0%
! AGTGCATCTCAAATAAATTT+AGG + chr5_3:51242045-51242064 Msa0816710:CDS 25.0%
! GTGCATCTCAAATAAATTTA+GGG + chr5_3:51242046-51242065 Msa0816710:CDS 25.0%
!! TTTTATTATTAGGGCAGTAT+GGG - chr5_3:51242146-51242165 None:intergenic 25.0%
! GGCATTTAAAAAAGATTAGA+GGG - chr5_3:51242412-51242431 None:intergenic 25.0%
! AGTTAATATTGCATTGAACT+AGG - chr5_3:51242476-51242495 None:intergenic 25.0%
! CATTAAATATCATTGTGAGT+TGG - chr5_3:51242669-51242688 None:intergenic 25.0%
! CAACTCACAATGATATTTAA+TGG + chr5_3:51242667-51242686 Msa0816710:intron 25.0%
! CACAATGATATTTAATGGAA+TGG + chr5_3:51242672-51242691 Msa0816710:intron 25.0%
!! CTATAATTGCATTTTCTCTT+AGG - chr5_3:51242929-51242948 None:intergenic 25.0%
! CTAAGAGAAAATGCAATTAT+AGG + chr5_3:51242927-51242946 Msa0816710:CDS 25.0%
! AATATTTCACTAAAGCTAGA+TGG - chr5_3:51243030-51243049 None:intergenic 25.0%
!!! TCTAGCTTTAGTGAAATATT+TGG + chr5_3:51243030-51243049 Msa0816710:CDS 25.0%
!! TATTTATTTGCAGGCTTTAA+CGG - chr5_3:51243088-51243107 None:intergenic 25.0%
! AAAGCCTGCAAATAAATATT+TGG + chr5_3:51243090-51243109 Msa0816710:CDS 25.0%
! AATTCAATAAAAGTTGGCTA+GGG + chr5_3:51243368-51243387 Msa0816710:CDS 25.0%
! TACAAAGTGAACAACATAAT+CGG + chr5_3:51243511-51243530 Msa0816710:CDS 25.0%
! TAAAACAATACCTGAAATCA+TGG + chr5_3:51243558-51243577 Msa0816710:CDS 25.0%
! GAACAACAAGATAAAAGAAA+TGG + chr5_3:51243642-51243661 Msa0816710:CDS 25.0%
! AAACAACATTTAGAAACGAT+TGG - chr5_3:51243803-51243822 None:intergenic 25.0%
! AAAAAGGGAAAGAAAAAAAG+AGG - chr5_3:51244264-51244283 None:intergenic 25.0%
! GAATCTATAAACCAAAAGTT+TGG + chr5_3:51244308-51244327 Msa0816710:intron 25.0%
! TCTTGTCAAATGTTTCATTT+AGG + chr5_3:51244387-51244406 Msa0816710:intron 25.0%
! AAAAGCAAAAAACATAAGCA+TGG - chr5_3:51244414-51244433 None:intergenic 25.0%
! GAAAAATCACTTTCTTCAAA+TGG + chr5_3:51244447-51244466 Msa0816710:CDS 25.0%
! ACTAAATGTGAAACAAAAAC+TGG + chr5_3:51244922-51244941 Msa0816710:CDS 25.0%
! CTCTCTTAAATCTATATGTA+AGG - chr5_3:51245038-51245057 None:intergenic 25.0%
! ACATATAGATTTAAGAGAGA+AGG + chr5_3:51245039-51245058 Msa0816710:CDS 25.0%
!!! GATATGATTTTTCAATCCAA+CGG - chr5_3:51245480-51245499 None:intergenic 25.0%
!! TCTTACGTGCTTTTATTAAA+CGG - chr5_3:51245579-51245598 None:intergenic 25.0%
! GAAATTGCATAGACAAAAAA+GGG + chr5_3:51245989-51246008 Msa0816710:intron 25.0%
! AAATTGCATAGACAAAAAAG+GGG + chr5_3:51245990-51246009 Msa0816710:intron 25.0%
! ATGATAAGAGCTTATGTTAT+AGG - chr5_3:51246205-51246224 None:intergenic 25.0%
! ATAAGCTCTTATCATATAAG+TGG + chr5_3:51246210-51246229 Msa0816710:intron 25.0%
!! TTTATTTCCATAAGCTTTTC+AGG - chr5_3:51246324-51246343 None:intergenic 25.0%
! AAAGCTTATGGAAATAAAGA+TGG + chr5_3:51246326-51246345 Msa0816710:intron 25.0%
! TTACTGACATAAGCATTTAT+GGG - chr5_3:51246404-51246423 None:intergenic 25.0%
! TTTACTGACATAAGCATTTA+TGG - chr5_3:51246405-51246424 None:intergenic 25.0%
! AATAAAACCAAAGATATGCT+TGG - chr5_3:51246447-51246466 None:intergenic 25.0%
!! TAATTGAGTTTGAAGTAAAG+TGG + chr5_3:51246516-51246535 Msa0816710:intron 25.0%
! AAGTTTCGTGTAAAAATTAG+TGG + chr5_3:51246569-51246588 Msa0816710:intron 25.0%
! TTATATTACTCGTCAAACTA+AGG + chr5_3:51246617-51246636 Msa0816710:intron 25.0%
!! AGTATTTTATGATGTAACTG+TGG + chr5_3:51246721-51246740 Msa0816710:intron 25.0%
! TACGTTAGTGTACAAATTTA+GGG - chr5_3:51246976-51246995 None:intergenic 25.0%
! TTACGTTAGTGTACAAATTT+AGG - chr5_3:51246977-51246996 None:intergenic 25.0%
!!! TTGCTTTTATGTATTCAACA+AGG + chr5_3:51247058-51247077 Msa0816710:three_prime_UTR 25.0%
!! TATTCGAACATTTTCTTTTG+TGG + chr5_3:51247117-51247136 Msa0816710:three_prime_UTR 25.0%
!!! GTTATGCACTTGTTTTTTAT+TGG + chr5_3:51247176-51247195 Msa0816710:three_prime_UTR 25.0%
TGAAATTGAAGAAGAAGCTA+TGG - chr5_3:51238916-51238935 None:intergenic 30.0%
ATGAAGAAAAAAAGAGAGGA+AGG - chr5_3:51238990-51239009 None:intergenic 30.0%
CATGATGAAGAAAAAAAGAG+AGG - chr5_3:51238994-51239013 None:intergenic 30.0%
! CTTTGTTGATTATGTGATGA+TGG + chr5_3:51239195-51239214 Msa0816710:intron 30.0%
!! TATAAGGACTTGTTGTATTC+AGG + chr5_3:51239336-51239355 Msa0816710:intron 30.0%
AATATGCTGAAAACTACTTG+TGG + chr5_3:51239488-51239507 Msa0816710:intron 30.0%
ATATGCTGAAAACTACTTGT+GGG + chr5_3:51239489-51239508 Msa0816710:intron 30.0%
GATTCAAATTTCCGTATTTG+CGG - chr5_3:51239687-51239706 None:intergenic 30.0%
TTAATAACTTCTCAGATTGG+TGG + chr5_3:51239721-51239740 Msa0816710:intron 30.0%
TGGCTGCTATAAATTTAGAT+TGG + chr5_3:51239741-51239760 Msa0816710:intron 30.0%
TCCATTGTAAGCATTAAATC+TGG + chr5_3:51239770-51239789 Msa0816710:intron 30.0%
TCCAGATTTAATGCTTACAA+TGG - chr5_3:51239774-51239793 None:intergenic 30.0%
! ATGTGTTCCTACTTGAATTT+TGG - chr5_3:51239875-51239894 None:intergenic 30.0%
GTTATAACATGCAATGTTTG+CGG - chr5_3:51239968-51239987 None:intergenic 30.0%
TATAGAATTGCATTGGAGTA+TGG - chr5_3:51240055-51240074 None:intergenic 30.0%
GAAACAAAAGGTAAAAACCT+CGG + chr5_3:51240349-51240368 Msa0816710:CDS 30.0%
TACATACCACCAACTTATAT+CGG - chr5_3:51240796-51240815 None:intergenic 30.0%
GAAAACAGGATTATTTGTAC+AGG + chr5_3:51240901-51240920 Msa0816710:CDS 30.0%
ATAAAAGAGATATCGGGATT+TGG + chr5_3:51241195-51241214 Msa0816710:intron 30.0%
GGTACAAAATTGATAAGTCA+AGG + chr5_3:51241451-51241470 Msa0816710:intron 30.0%
!!! TAGTCCGGTTTTTTCATTTT+CGG - chr5_3:51241628-51241647 None:intergenic 30.0%
AACATATGAACAGCTCAAAA+AGG + chr5_3:51242080-51242099 Msa0816710:CDS 30.0%
ACATATGAACAGCTCAAAAA+GGG + chr5_3:51242081-51242100 Msa0816710:CDS 30.0%
! CTTTTATTATTAGGGCAGTA+TGG - chr5_3:51242147-51242166 None:intergenic 30.0%
CATACTGCCCTAATAATAAA+AGG + chr5_3:51242145-51242164 Msa0816710:CDS 30.0%
AACTAGAACTGACATTGAAA+AGG + chr5_3:51242236-51242255 Msa0816710:CDS 30.0%
AGTTAGGTAATTGGAAAGAA+AGG - chr5_3:51242389-51242408 None:intergenic 30.0%
AAAAAAGATTAGAGGGAGTT+AGG - chr5_3:51242405-51242424 None:intergenic 30.0%
CGGCATTTAAAAAAGATTAG+AGG - chr5_3:51242413-51242432 None:intergenic 30.0%
ACACAATTTATCAACAGAAG+CGG - chr5_3:51242433-51242452 None:intergenic 30.0%
TAGGAAAATGACATGTAAGT+AGG - chr5_3:51242457-51242476 None:intergenic 30.0%
!!! AACTCCTTATTTTGTTTTGC+AGG + chr5_3:51242731-51242750 Msa0816710:intron 30.0%
AACTCCTTAATCATGCTTTA+GGG + chr5_3:51242957-51242976 Msa0816710:CDS 30.0%
GGAAAACAATCTTATGAATG+TGG + chr5_3:51243111-51243130 Msa0816710:CDS 30.0%
! ACAAGAATGTTTTCATTCAC+TGG - chr5_3:51243154-51243173 None:intergenic 30.0%
ACATTCTTGTCAATTCTGAA+AGG + chr5_3:51243164-51243183 Msa0816710:CDS 30.0%
TAAGGGATGAATATCGAATA+AGG + chr5_3:51243278-51243297 Msa0816710:CDS 30.0%
AAGGGATGAATATCGAATAA+GGG + chr5_3:51243279-51243298 Msa0816710:CDS 30.0%
TCGTGGAATTCAATAAAAGT+TGG + chr5_3:51243362-51243381 Msa0816710:CDS 30.0%
GAATTCAATAAAAGTTGGCT+AGG + chr5_3:51243367-51243386 Msa0816710:CDS 30.0%
! ATAATGCATTGGCATTTGAA+AGG + chr5_3:51243395-51243414 Msa0816710:CDS 30.0%
! TAATGCATTGGCATTTGAAA+GGG + chr5_3:51243396-51243415 Msa0816710:CDS 30.0%
TCTTGTAGTGAACAAAAATC+CGG + chr5_3:51243457-51243476 Msa0816710:CDS 30.0%
ACAAAGTGAACAACATAATC+GGG + chr5_3:51243512-51243531 Msa0816710:CDS 30.0%
TGAAAGTGAAAGGAAAAAGT+TGG + chr5_3:51244074-51244093 Msa0816710:CDS 30.0%
! ATCCTTGTTTGGAGAAAAAA+GGG - chr5_3:51244279-51244298 None:intergenic 30.0%
!!! CTTTTGGTTTATAGATTCCT+CGG - chr5_3:51244306-51244325 None:intergenic 30.0%
!! GATTAGTTCTGTTTATGGTT+CGG + chr5_3:51244582-51244601 Msa0816710:intron 30.0%
AAGGAAAACCTAATCTCATT+CGG + chr5_3:51244611-51244630 Msa0816710:CDS 30.0%
ACTGAACTGGCATATATATT+TGG - chr5_3:51244726-51244745 None:intergenic 30.0%
AAATATATATGCCAGTTCAG+TGG + chr5_3:51244725-51244744 Msa0816710:intron 30.0%
TTGACTATCTATTTATCCAG+CGG + chr5_3:51244855-51244874 Msa0816710:CDS 30.0%
!!! TTTTTCAAGCTGGATGATTT+TGG - chr5_3:51244900-51244919 None:intergenic 30.0%
!!! CATTTAGTTGTTTTTCAAGC+TGG - chr5_3:51244910-51244929 None:intergenic 30.0%
TGTGAAACAAAAACTGGAAT+TGG + chr5_3:51244928-51244947 Msa0816710:CDS 30.0%
! TTCTTCATAGCTTCTAGAAA+TGG - chr5_3:51245318-51245337 None:intergenic 30.0%
TGTATTAGAAAATTGACCGT+TGG + chr5_3:51245461-51245480 Msa0816710:intron 30.0%
ATTAATCTTGACGTACTTCA+GGG - chr5_3:51245555-51245574 None:intergenic 30.0%
GGAAATTGCATAGACAAAAA+AGG + chr5_3:51245988-51246007 Msa0816710:intron 30.0%
TATTCCATTAGAAACATACC+AGG - chr5_3:51246028-51246047 None:intergenic 30.0%
!! GAATTTTGAGAAAGGATTTG+TGG - chr5_3:51246124-51246143 None:intergenic 30.0%
TTAAGTCCTGTTTGGATAAT+CGG + chr5_3:51246167-51246186 Msa0816710:intron 30.0%
! ATTATACCGATTATCCAAAC+AGG - chr5_3:51246176-51246195 None:intergenic 30.0%
ATGGAAACAACTTATAGACA+GGG + chr5_3:51246345-51246364 Msa0816710:intron 30.0%
ATCAAGTTAATCAATTAGGC+CGG - chr5_3:51246474-51246493 None:intergenic 30.0%
GTGCTTATGCTTATTCATTT+AGG + chr5_3:51246918-51246937 Msa0816710:CDS 30.0%
CTTATGCTTATTCATTTAGG+TGG + chr5_3:51246921-51246940 Msa0816710:CDS 30.0%
ATTTAGGGGCTTAAAAGTTT+AGG - chr5_3:51246961-51246980 None:intergenic 30.0%
ACGTTAGTGTACAAATTTAG+GGG - chr5_3:51246975-51246994 None:intergenic 30.0%
! CTTTTATGTATTCAACAAGG+TGG + chr5_3:51247061-51247080 Msa0816710:three_prime_UTR 30.0%
TGAAGTAGAGACATAATTTG+TGG + chr5_3:51247146-51247165 Msa0816710:three_prime_UTR 30.0%
! AAGAAGCTATGGAGTTTGTT+TGG - chr5_3:51238905-51238924 None:intergenic 35.0%
CAGTACTTTCAATCTCTTCA+AGG + chr5_3:51238956-51238975 Msa0816710:five_prime_UTR 35.0%
TGATACAGTGAAAGTCTGTT+TGG - chr5_3:51239595-51239614 None:intergenic 35.0%
GAATTACCAAAGCCAAAATG+TGG - chr5_3:51239849-51239868 None:intergenic 35.0%
! TGAAGGATCTTTGAAGAAAC+TGG + chr5_3:51240115-51240134 Msa0816710:intron 35.0%
TACTTCACGATGGTATTTAG+TGG + chr5_3:51240139-51240158 Msa0816710:intron 35.0%
TCTTACGAAGAACTCAAAAC+AGG + chr5_3:51240326-51240345 Msa0816710:CDS 35.0%
CTTACGAAGAACTCAAAACA+GGG + chr5_3:51240327-51240346 Msa0816710:CDS 35.0%
ACTCAAAACAGGGAAACAAA+AGG + chr5_3:51240337-51240356 Msa0816710:CDS 35.0%
TTATAATCCTGTTTCCTCTC+GGG - chr5_3:51240401-51240420 None:intergenic 35.0%
CTTATAATCCTGTTTCCTCT+CGG - chr5_3:51240402-51240421 None:intergenic 35.0%
!! AAGAGAAGTGCTAAAGAGAA+GGG + chr5_3:51240473-51240492 Msa0816710:CDS 35.0%
TAAAGAGAAGGGTAGTCATT+TGG + chr5_3:51240484-51240503 Msa0816710:CDS 35.0%
CAAGATCTTAACAGTAAGGA+TGG + chr5_3:51240527-51240546 Msa0816710:CDS 35.0%
AACAGATCACCTTGATCTAT+AGG - chr5_3:51240563-51240582 None:intergenic 35.0%
CCTTAAAACGACGACTAAAA+CGG - chr5_3:51240600-51240619 None:intergenic 35.0%
AATGTCTCACTGTTCTATCA+AGG + chr5_3:51240767-51240786 Msa0816710:CDS 35.0%
TCAAGGATACCGATATAAGT+TGG + chr5_3:51240784-51240803 Msa0816710:CDS 35.0%
GCTTATGAAGAGCTCAAAAA+TGG + chr5_3:51240822-51240841 Msa0816710:CDS 35.0%
AAGAGCTCAAAAATGGAACT+CGG + chr5_3:51240829-51240848 Msa0816710:CDS 35.0%
! TGTTTTCTATTAGGGCAGTA+CGG - chr5_3:51240888-51240907 None:intergenic 35.0%
! ACTCCTAGAACATGCTTTTA+TGG + chr5_3:51240926-51240945 Msa0816710:CDS 35.0%
! CAACCATAAAAGCATGTTCT+AGG - chr5_3:51240932-51240951 None:intergenic 35.0%
! CTAGAACATGCTTTTATGGT+TGG + chr5_3:51240930-51240949 Msa0816710:CDS 35.0%
! AACATGCTTTTATGGTTGGT+CGG + chr5_3:51240934-51240953 Msa0816710:CDS 35.0%
CTAGAACGAAAAAATTTCCG+TGG - chr5_3:51241101-51241120 None:intergenic 35.0%
ACATACAACCAACTTATTCG+AGG - chr5_3:51241526-51241545 None:intergenic 35.0%
!! TTTTTCATTTTCGGGCAGTA+TGG - chr5_3:51241619-51241638 None:intergenic 35.0%
!!! AGTCCGGTTTTTTCATTTTC+GGG - chr5_3:51241627-51241646 None:intergenic 35.0%
AGTCGGTATATTCAGTAACT+AGG - chr5_3:51241856-51241875 None:intergenic 35.0%
CATATGAACAGCTCAAAAAG+GGG + chr5_3:51242082-51242101 Msa0816710:CDS 35.0%
TAGAACTGACATTGAAAAGG+CGG + chr5_3:51242239-51242258 Msa0816710:CDS 35.0%
AAGGATCTTATAAATGTCGG+TGG + chr5_3:51242291-51242310 Msa0816710:CDS 35.0%
ATTAGAGGGAGTTAGGTAAT+TGG - chr5_3:51242398-51242417 None:intergenic 35.0%
CAATGACACCCTTAACTATT+TGG + chr5_3:51242506-51242525 Msa0816710:intron 35.0%
TGAGTGAGAAATAAGTGGAA+TGG + chr5_3:51242532-51242551 Msa0816710:intron 35.0%
GAGTGAGAAATAAGTGGAAT+GGG + chr5_3:51242533-51242552 Msa0816710:intron 35.0%
! CATTTTCTCTTAGGGCAATA+CGG - chr5_3:51242920-51242939 None:intergenic 35.0%
GAACTCCTTAATCATGCTTT+AGG + chr5_3:51242956-51242975 Msa0816710:CDS 35.0%
ACTCCTTAATCATGCTTTAG+GGG + chr5_3:51242958-51242977 Msa0816710:CDS 35.0%
TTTCACTAAAGCTAGATGGT+TGG - chr5_3:51243026-51243045 None:intergenic 35.0%
GGATCTTATGACTATGAATG+TGG + chr5_3:51243057-51243076 Msa0816710:CDS 35.0%
! ATTCTGAAAGGCAGTTTGTA+TGG + chr5_3:51243176-51243195 Msa0816710:CDS 35.0%
AGGGATGAATATCGAATAAG+GGG + chr5_3:51243280-51243299 Msa0816710:CDS 35.0%
GCTAGGGTTATATAATGCAT+TGG + chr5_3:51243384-51243403 Msa0816710:CDS 35.0%
GCGTATGAATTAGATTGTCA+CGG + chr5_3:51243418-51243437 Msa0816710:CDS 35.0%
CGTATGAATTAGATTGTCAC+GGG + chr5_3:51243419-51243438 Msa0816710:CDS 35.0%
ATTAGATTGTCACGGGAAAA+AGG + chr5_3:51243426-51243445 Msa0816710:CDS 35.0%
CAAAGTGAACAACATAATCG+GGG + chr5_3:51243513-51243532 Msa0816710:CDS 35.0%
CAATGAAATTACACTTCGCA+TGG + chr5_3:51243675-51243694 Msa0816710:CDS 35.0%
!! CACTTTCAGAGTGTTTTGAA+TGG + chr5_3:51243964-51243983 Msa0816710:CDS 35.0%
!! GTGTTTTGAATGGTCATGAA+AGG + chr5_3:51243974-51243993 Msa0816710:CDS 35.0%
AATTGAACTGGAAAAACGTG+AGG + chr5_3:51244044-51244063 Msa0816710:CDS 35.0%
GTTGGATGAAGAGATTAACA+AGG + chr5_3:51244092-51244111 Msa0816710:CDS 35.0%
CACTTTGATCTTCATTTCAC+AGG - chr5_3:51244172-51244191 None:intergenic 35.0%
!!! TTCCCTTTTTTCTCCAAACA+AGG + chr5_3:51244274-51244293 Msa0816710:intron 35.0%
! GATCCTTGTTTGGAGAAAAA+AGG - chr5_3:51244280-51244299 None:intergenic 35.0%
!! TATCCAAAGGTGTTAATGTC+AGG + chr5_3:51244560-51244579 Msa0816710:intron 35.0%
AATCCTGACATTAACACCTT+TGG - chr5_3:51244566-51244585 None:intergenic 35.0%
!! GTCAGGATTAGTTCTGTTTA+TGG + chr5_3:51244577-51244596 Msa0816710:intron 35.0%
! CAGTTTTACCGAATGAGATT+AGG - chr5_3:51244622-51244641 None:intergenic 35.0%
AAGTTTACCGAATATGGTTC+GGG - chr5_3:51244646-51244665 None:intergenic 35.0%
CAAGTTTACCGAATATGGTT+CGG - chr5_3:51244647-51244666 None:intergenic 35.0%
! TGGTTCAAGTTTACCGAATA+TGG - chr5_3:51244652-51244671 None:intergenic 35.0%
CAGTTCAGTGTATACCAATT+GGG - chr5_3:51244698-51244717 None:intergenic 35.0%
! CTGAACCAAAACTACCTTTT+CGG + chr5_3:51244750-51244769 Msa0816710:intron 35.0%
TTCGGTTTAACGGTTTGATT+CGG + chr5_3:51244778-51244797 Msa0816710:intron 35.0%
!!! TAACGGTTTGATTCGGTTTT+TGG + chr5_3:51244785-51244804 Msa0816710:intron 35.0%
! ACATGATGTTCTGGATATGA+TGG + chr5_3:51245009-51245028 Msa0816710:CDS 35.0%
GCTCTTTAATGATCAGAGTT+TGG - chr5_3:51245096-51245115 None:intergenic 35.0%
ACAACTTGGCATCTCTTTAA+TGG - chr5_3:51245253-51245272 None:intergenic 35.0%
CATTCTCTTCACACGAATAT+CGG - chr5_3:51245277-51245296 None:intergenic 35.0%
GATATTCGTGTGAAGAGAAT+GGG + chr5_3:51245276-51245295 Msa0816710:CDS 35.0%
ATATTCGTGTGAAGAGAATG+GGG + chr5_3:51245277-51245296 Msa0816710:CDS 35.0%
! TTTTAAATGGATGCCAGTCA+GGG - chr5_3:51245413-51245432 None:intergenic 35.0%
! ATTTTAAATGGATGCCAGTC+AGG - chr5_3:51245414-51245433 None:intergenic 35.0%
TACAATCCAAGAGAAACATC+AGG + chr5_3:51245437-51245456 Msa0816710:CDS 35.0%
ATACAACCTGATGTTTCTCT+TGG - chr5_3:51245446-51245465 None:intergenic 35.0%
TTAATCTTGACGTACTTCAG+GGG - chr5_3:51245554-51245573 None:intergenic 35.0%
CATTAATCTTGACGTACTTC+AGG - chr5_3:51245556-51245575 None:intergenic 35.0%
GAGCAAATTGATCTACACAA+TGG + chr5_3:51245665-51245684 Msa0816710:intron 35.0%
! ATTCAAAGAAAGCACGAAGA+AGG - chr5_3:51245761-51245780 None:intergenic 35.0%
TCGTGCTTTCTTTGAATTTC+AGG + chr5_3:51245764-51245783 Msa0816710:intron 35.0%
AATGAACTGAGAAACGAGAT+GGG + chr5_3:51245816-51245835 Msa0816710:CDS 35.0%
ATGAATATAATCCAAGTGGG+CGG + chr5_3:51245883-51245902 Msa0816710:CDS 35.0%
GAATTATGGAATTACGCAGA+GGG + chr5_3:51245918-51245937 Msa0816710:CDS 35.0%
!!! TGCGAGTTTTATTAAAGCAG+TGG + chr5_3:51245967-51245986 Msa0816710:intron 35.0%
CACAACATTTAAGTCCTGTT+TGG + chr5_3:51246159-51246178 Msa0816710:intron 35.0%
AAGCTATCCTGAAAAGCTTA+TGG + chr5_3:51246314-51246333 Msa0816710:intron 35.0%
GATGGAAACAACTTATAGAC+AGG + chr5_3:51246344-51246363 Msa0816710:intron 35.0%
!! GGACTATTTTGAAGAGCTTA+TGG - chr5_3:51246383-51246402 None:intergenic 35.0%
AGTCAATCCAAGCATATCTT+TGG + chr5_3:51246437-51246456 Msa0816710:intron 35.0%
!!! ATCTTTGGTTTTATTCTCCC+CGG + chr5_3:51246452-51246471 Msa0816710:intron 35.0%
TCAAGTTAATCAATTAGGCC+GGG - chr5_3:51246473-51246492 None:intergenic 35.0%
CGTCAAACTAAGGTTCAATT+TGG + chr5_3:51246627-51246646 Msa0816710:intron 35.0%
TTATAGTCTCGTGTCAAATG+TGG - chr5_3:51246696-51246715 None:intergenic 35.0%
! ATCACACATTGTTTTCTCGA+AGG + chr5_3:51246782-51246801 Msa0816710:CDS 35.0%
! TCACACATTGTTTTCTCGAA+GGG + chr5_3:51246783-51246802 Msa0816710:CDS 35.0%
TCGTGCAGTTGAACATATTT+AGG + chr5_3:51246808-51246827 Msa0816710:CDS 35.0%
! TCGAACATTTTCTTTTGTGG+TGG + chr5_3:51247120-51247139 Msa0816710:three_prime_UTR 35.0%
! AGTAGAGACATAATTTGTGG+TGG + chr5_3:51247149-51247168 Msa0816710:three_prime_UTR 35.0%
TGTTGTATTCAGGCCCAATT+TGG + chr5_3:51239346-51239365 Msa0816710:intron 40.0%
ATACCATTTGAGCGAGCTTA+CGG - chr5_3:51239531-51239550 None:intergenic 40.0%
CATTGTGACTTCCGCAAATA+CGG + chr5_3:51239673-51239692 Msa0816710:intron 40.0%
ATTCGCGCCAAAATTCAAGT+AGG + chr5_3:51239865-51239884 Msa0816710:intron 40.0%
CAATCACATAGTTGTCGATC+TGG - chr5_3:51239923-51239942 None:intergenic 40.0%
! TTGTTTAGGTGCTACATCAG+AGG - chr5_3:51240171-51240190 None:intergenic 40.0%
TGAGCCATAGAGTTTCTCTT+AGG - chr5_3:51240245-51240264 None:intergenic 40.0%
TATCAAGGATACCGGTATAG+CGG + chr5_3:51240271-51240290 Msa0816710:CDS 40.0%
TATAATCCTGTTTCCTCTCG+GGG - chr5_3:51240400-51240419 None:intergenic 40.0%
!! GAAGAGAAGTGCTAAAGAGA+AGG + chr5_3:51240472-51240491 Msa0816710:CDS 40.0%
GGAGCAAGATCTTAACAGTA+AGG + chr5_3:51240523-51240542 Msa0816710:CDS 40.0%
!! CCGTTTTAGTCGTCGTTTTA+AGG + chr5_3:51240597-51240616 Msa0816710:intron 40.0%
TATTTGCCTGGTAAATCAGC+AGG + chr5_3:51240676-51240695 Msa0816710:intron 40.0%
GTTACGAACACAATAAGTCC+AGG + chr5_3:51240735-51240754 Msa0816710:intron 40.0%
TGAGACATTACTGTTTGTCC+TGG - chr5_3:51240756-51240775 None:intergenic 40.0%
! AGGATACCGATATAAGTTGG+TGG + chr5_3:51240787-51240806 Msa0816710:CDS 40.0%
! GTTTTCTATTAGGGCAGTAC+GGG - chr5_3:51240887-51240906 None:intergenic 40.0%
GTACTGCCCTAATAGAAAAC+AGG + chr5_3:51240887-51240906 Msa0816710:CDS 40.0%
AAGGATATTACGAGTATGCC+TGG + chr5_3:51241023-51241042 Msa0816710:CDS 40.0%
! CCTTTATCAACAGGCTTTGA+CGG - chr5_3:51241050-51241069 None:intergenic 40.0%
TCAGGATCACCTTTATCAAC+AGG - chr5_3:51241059-51241078 None:intergenic 40.0%
TCTATTACTAGCGTGCAAAC+AGG - chr5_3:51241371-51241390 None:intergenic 40.0%
AAGTCAAGGACAAACTGTCA+CGG + chr5_3:51241465-51241484 Msa0816710:CDS 40.0%
CAAGTGATCCTCGAATAAGT+TGG + chr5_3:51241515-51241534 Msa0816710:CDS 40.0%
CAAAGTGAGAATCTCAGATG+AGG + chr5_3:51241582-51241601 Msa0816710:CDS 40.0%
CTGCCCGAAAATGAAAAAAC+CGG + chr5_3:51241621-51241640 Msa0816710:CDS 40.0%
AAAAACCGGACTATGTGTAC+AGG + chr5_3:51241635-51241654 Msa0816710:CDS 40.0%
AAAACCGGACTATGTGTACA+GGG + chr5_3:51241636-51241655 Msa0816710:CDS 40.0%
ATTTCCCTGTACACATAGTC+CGG - chr5_3:51241643-51241662 None:intergenic 40.0%
AAATCCTTGAACACGCTTCT+GGG + chr5_3:51241659-51241678 Msa0816710:CDS 40.0%
!! AAAGAGAGGTATCAGAGAGA+AGG + chr5_3:51241702-51241721 Msa0816710:CDS 40.0%
!! CCTTCAATCACAGGTTTTGA+TGG - chr5_3:51241784-51241803 None:intergenic 40.0%
CCATCAAAACCTGTGATTGA+AGG + chr5_3:51241781-51241800 Msa0816710:CDS 40.0%
GAAGAATCACCTTCAATCAC+AGG - chr5_3:51241793-51241812 None:intergenic 40.0%
GTGATTGAAGGTGATTCTTC+TGG + chr5_3:51241793-51241812 Msa0816710:CDS 40.0%
! TTCTTCTCGGCTTTGTATCA+TGG - chr5_3:51241986-51242005 None:intergenic 40.0%
! GCAAGTGAAAGTCTTATCTG+AGG - chr5_3:51242124-51242143 None:intergenic 40.0%
TAAAACGGGATTACGTGTAC+AGG + chr5_3:51242169-51242188 Msa0816710:CDS 40.0%
AAAACGGGATTACGTGTACA+GGG + chr5_3:51242170-51242189 Msa0816710:CDS 40.0%
GAAATCCTTGAACATGCTTC+CGG + chr5_3:51242192-51242211 Msa0816710:CDS 40.0%
AAATCCTTGAACATGCTTCC+GGG + chr5_3:51242193-51242212 Msa0816710:CDS 40.0%
GAGATATCACCTTTCTTCGT+TGG - chr5_3:51242327-51242346 None:intergenic 40.0%
ACTCAGCGCCAAATAGTTAA+GGG - chr5_3:51242517-51242536 None:intergenic 40.0%
AGGGAATGATATGCAGACAT+TGG + chr5_3:51242643-51242662 Msa0816710:intron 40.0%
GGTGCCTGCAAAACAAAATA+AGG - chr5_3:51242738-51242757 None:intergenic 40.0%
TACTCCTCGGTTCAACATTA+TGG - chr5_3:51242759-51242778 None:intergenic 40.0%
TATTAGCATCCTTCTCAGAG+AGG - chr5_3:51242796-51242815 None:intergenic 40.0%
ATCCTATGCAGAACTCAAGA+AGG + chr5_3:51242853-51242872 Msa0816710:CDS 40.0%
TCCTATGCAGAACTCAAGAA+GGG + chr5_3:51242854-51242873 Msa0816710:CDS 40.0%
ACTCAAGAAGGGAATTCACA+AGG + chr5_3:51242865-51242884 Msa0816710:CDS 40.0%
CTACCCCTAAAGCATGATTA+AGG - chr5_3:51242964-51242983 None:intergenic 40.0%
!! CTTAATCATGCTTTAGGGGT+AGG + chr5_3:51242962-51242981 Msa0816710:CDS 40.0%
! AAGGAGAAGTGTATTGGAGA+AGG + chr5_3:51243000-51243019 Msa0816710:CDS 40.0%
ACCAATACATCGTCCATCTT+CGG - chr5_3:51243242-51243261 None:intergenic 40.0%
TGAAAGTGGTTCCAAGCTAA+GGG + chr5_3:51243261-51243280 Msa0816710:CDS 40.0%
TCGATATTCATCCCTTAGCT+TGG - chr5_3:51243275-51243294 None:intergenic 40.0%
AAAAATCCGGTCTTTATGCG+TGG + chr5_3:51243470-51243489 Msa0816710:CDS 40.0%
AAAATCCGGTCTTTATGCGT+GGG + chr5_3:51243471-51243490 Msa0816710:CDS 40.0%
TCACTTTGTAGTCATCAGCT+CGG - chr5_3:51243501-51243520 None:intergenic 40.0%
! TGAAAGGCTTAAGTTGCAAC+TGG + chr5_3:51243990-51244009 Msa0816710:CDS 40.0%
TGAGTTGCGAAGAATTGAAC+TGG + chr5_3:51244032-51244051 Msa0816710:CDS 40.0%
AGGCACGTAATGAAAGTGAA+AGG + chr5_3:51244064-51244083 Msa0816710:CDS 40.0%
CTTTCTTCAAATGGCTGCTT+TGG + chr5_3:51244456-51244475 Msa0816710:CDS 40.0%
!! GAAACTTGCTGCAGATCAAA+AGG + chr5_3:51244507-51244526 Msa0816710:CDS 40.0%
!! TTCTGTTTATGGTTCGGTTC+AGG + chr5_3:51244588-51244607 Msa0816710:intron 40.0%
AAACTGACCCGAACCATATT+CGG + chr5_3:51244636-51244655 Msa0816710:intron 40.0%
AAACTTGAACCAAACCGTTG+AGG + chr5_3:51244660-51244679 Msa0816710:intron 40.0%
AACTTGAACCAAACCGTTGA+GGG + chr5_3:51244661-51244680 Msa0816710:intron 40.0%
CCAGTTCAGTGTATACCAAT+TGG - chr5_3:51244699-51244718 None:intergenic 40.0%
CCAATTGGTATACACTGAAC+TGG + chr5_3:51244696-51244715 Msa0816710:intron 40.0%
AACAGTCTTAGTCAGCAAAG+TGG + chr5_3:51244815-51244834 Msa0816710:intron 40.0%
TTGGAGATTCAGCAACTAAG+AGG + chr5_3:51244947-51244966 Msa0816710:CDS 40.0%
ACTAAACGTCATGAAGCACA+TGG + chr5_3:51244973-51244992 Msa0816710:CDS 40.0%
ATGAAGCACATGGAAGATGA+TGG + chr5_3:51244983-51245002 Msa0816710:CDS 40.0%
TGATGGAGAACATGATGTTC+TGG + chr5_3:51245000-51245019 Msa0816710:CDS 40.0%
TAAGAGCAATGATGAACTGC+AGG + chr5_3:51245117-51245136 Msa0816710:CDS 40.0%
CCAAGAGTTTAAAAGATGCG+AGG - chr5_3:51245212-51245231 None:intergenic 40.0%
! CCTCGCATCTTTTAAACTCT+TGG + chr5_3:51245209-51245228 Msa0816710:intron 40.0%
CGATATTCGTGTGAAGAGAA+TGG + chr5_3:51245275-51245294 Msa0816710:CDS 40.0%
TATTCGTGTGAAGAGAATGG+GGG + chr5_3:51245278-51245297 Msa0816710:CDS 40.0%
TTCTGAACTGTGTTCGTTGT+GGG + chr5_3:51245371-51245390 Msa0816710:CDS 40.0%
! CATGAGGTACGTCAAGTTTT+AGG - chr5_3:51245602-51245621 None:intergenic 40.0%
!!! CAAACTCGTGCTACTTGTTT+TGG + chr5_3:51245626-51245645 Msa0816710:intron 40.0%
CGAAGAAGGTAAGTTTCACT+AGG - chr5_3:51245747-51245766 None:intergenic 40.0%
GAATGAACTGAGAAACGAGA+TGG + chr5_3:51245815-51245834 Msa0816710:CDS 40.0%
CGAAGAAGTTTACAAAGCTG+TGG + chr5_3:51245839-51245858 Msa0816710:CDS 40.0%
AGAAGTTTACAAAGCTGTGG+TGG + chr5_3:51245842-51245861 Msa0816710:CDS 40.0%
GGTACATAACCTCGGAATTA+TGG + chr5_3:51245904-51245923 Msa0816710:CDS 40.0%
TGCGTAATTCCATAATTCCG+AGG - chr5_3:51245916-51245935 None:intergenic 40.0%
GGAATTATGGAATTACGCAG+AGG + chr5_3:51245917-51245936 Msa0816710:CDS 40.0%
! GAAGCCTGGTATGTTTCTAA+TGG + chr5_3:51246021-51246040 Msa0816710:intron 40.0%
CAAGTTAATCAATTAGGCCG+GGG - chr5_3:51246472-51246491 None:intergenic 40.0%
CTTGATACTTCAAGCTTCTG+TGG + chr5_3:51246855-51246874 Msa0816710:CDS 40.0%
AAGCATAAGCACAAAGCTTG+TGG - chr5_3:51246910-51246929 None:intergenic 40.0%
! AGAGACATAATTTGTGGTGG+TGG + chr5_3:51247152-51247171 Msa0816710:three_prime_UTR 40.0%
! TTTTACGCAGTCACGTGATG+TGG + chr5_3:51239818-51239837 Msa0816710:intron 45.0%
! GATGTGGACAGTCCACATTT+TGG + chr5_3:51239834-51239853 Msa0816710:intron 45.0%
!!! GACAGTCCACATTTTGGCTT+TGG + chr5_3:51239840-51239859 Msa0816710:intron 45.0%
GGACAAACACTGCCTAAAAC+AGG - chr5_3:51240034-51240053 None:intergenic 45.0%
AGAAACTGGCTACTTCACGA+TGG + chr5_3:51240129-51240148 Msa0816710:intron 45.0%
CGAGCCTAAGAGAAACTCTA+TGG + chr5_3:51240238-51240257 Msa0816710:exon 45.0%
TATGGCTCACTGCTCTATCA+AGG + chr5_3:51240256-51240275 Msa0816710:exon 45.0%
CACTGCTCTATCAAGGATAC+CGG + chr5_3:51240263-51240282 Msa0816710:CDS 45.0%
GAGATACCACCAACTCAACT+GGG - chr5_3:51240300-51240319 None:intergenic 45.0%
GTACGGACAACTGAAACTCT+CGG - chr5_3:51240375-51240394 None:intergenic 45.0%
AACTCCTTAATCACGCCACT+GGG + chr5_3:51240429-51240448 Msa0816710:CDS 45.0%
! GAAGGGTAGTCATTTGGCTT+TGG + chr5_3:51240490-51240509 Msa0816710:CDS 45.0%
GCATCGAGACCTATAGATCA+AGG + chr5_3:51240551-51240570 Msa0816710:CDS 45.0%
CGGAATGTGAAAACCTCAGA+CGG + chr5_3:51240849-51240868 Msa0816710:CDS 45.0%
GGAATGTGAAAACCTCAGAC+GGG + chr5_3:51240850-51240869 Msa0816710:CDS 45.0%
! CCGTCAAAGCCTGTTGATAA+AGG + chr5_3:51241047-51241066 Msa0816710:CDS 45.0%
ATATCGCAAACAGCAGGATC+AGG - chr5_3:51241077-51241096 None:intergenic 45.0%
! CTGCTGTTTGCGATATACCA+CGG + chr5_3:51241081-51241100 Msa0816710:CDS 45.0%
CCAGTATCCTTGTTAGAGCA+TGG - chr5_3:51241493-51241512 None:intergenic 45.0%
CCATGCTCTAACAAGGATAC+TGG + chr5_3:51241490-51241509 Msa0816710:CDS 45.0%
GAAATCCTTGAACACGCTTC+TGG + chr5_3:51241658-51241677 Msa0816710:CDS 45.0%
AATCCTTGAACACGCTTCTG+GGG + chr5_3:51241660-51241679 Msa0816710:CDS 45.0%
CAGAGTAGTTCGCAAAAGAG+AGG + chr5_3:51241688-51241707 Msa0816710:CDS 45.0%
!! ATCACAGGTTTTGATGGAGC+AGG - chr5_3:51241778-51241797 None:intergenic 45.0%
TTTGGTCGAAGTAACGTGCA+AGG + chr5_3:51241901-51241920 Msa0816710:intron 45.0%
! GAGTCGTCGCATTTTCTTCT+CGG - chr5_3:51241999-51242018 None:intergenic 45.0%
AATCCTTGAACATGCTTCCG+GGG + chr5_3:51242194-51242213 Msa0816710:CDS 45.0%
CATTGAAAAGGCGGATCATC+TGG + chr5_3:51242248-51242267 Msa0816710:CDS 45.0%
!! CCTTTCTTCGTTGGTTCTGA+AGG - chr5_3:51242318-51242337 None:intergenic 45.0%
CCTTCAGAACCAACGAAGAA+AGG + chr5_3:51242315-51242334 Msa0816710:CDS 45.0%
CACTCAGCGCCAAATAGTTA+AGG - chr5_3:51242518-51242537 None:intergenic 45.0%
AACCGAGGAGTAACTGTAAC+AGG + chr5_3:51242767-51242786 Msa0816710:CDS 45.0%
GACCTGTTACAGTTACTCCT+CGG - chr5_3:51242772-51242791 None:intergenic 45.0%
TCCCTTCTTGAGTTCTGCAT+AGG - chr5_3:51242858-51242877 None:intergenic 45.0%
TAGGTCAAAGTGACGCACAA+AGG + chr5_3:51242981-51243000 Msa0816710:CDS 45.0%
! CGCACAAAGGAGAAGTGTAT+TGG + chr5_3:51242994-51243013 Msa0816710:CDS 45.0%
AAAGGCAGTTTGTATGGCCA+TGG + chr5_3:51243182-51243201 Msa0816710:CDS 45.0%
AGTTTGTATGGCCATGGACT+GGG + chr5_3:51243188-51243207 Msa0816710:CDS 45.0%
TTTACCACAATCCCAGTCCA+TGG - chr5_3:51243202-51243221 None:intergenic 45.0%
TACATCGTCCATCTTCGGTT+TGG - chr5_3:51243237-51243256 None:intergenic 45.0%
ACCGAAGATGGACGATGTAT+TGG + chr5_3:51243238-51243257 Msa0816710:CDS 45.0%
! GGACGATGTATTGGTGAAAG+TGG + chr5_3:51243247-51243266 Msa0816710:CDS 45.0%
GTGAAAGTGGTTCCAAGCTA+AGG + chr5_3:51243260-51243279 Msa0816710:CDS 45.0%
!! TCCGAACGCTTTGGAATTCA+TGG + chr5_3:51243320-51243339 Msa0816710:CDS 45.0%
! CCCATGAATTCCAAAGCGTT+CGG - chr5_3:51243324-51243343 None:intergenic 45.0%
!! CCGAACGCTTTGGAATTCAT+GGG + chr5_3:51243321-51243340 Msa0816710:CDS 45.0%
!! CGAACGCTTTGGAATTCATG+GGG + chr5_3:51243322-51243341 Msa0816710:CDS 45.0%
ATTGTCACGGGAAAAAGGAC+TGG + chr5_3:51243431-51243450 Msa0816710:CDS 45.0%
CACTTTGTAGTCATCAGCTC+GGG - chr5_3:51243500-51243519 None:intergenic 45.0%
CGGGGAACAACTACAAAAGA+TGG + chr5_3:51243531-51243550 Msa0816710:CDS 45.0%
GCATCTTGCTCCATGATTTC+AGG - chr5_3:51243571-51243590 None:intergenic 45.0%
TCATGGAGCAAGATGCTAGA+AGG + chr5_3:51243575-51243594 Msa0816710:CDS 45.0%
ACTTCGCATGGACATTGTGA+TGG + chr5_3:51243687-51243706 Msa0816710:CDS 45.0%
CTTCGCATGGACATTGTGAT+GGG + chr5_3:51243688-51243707 Msa0816710:CDS 45.0%
CTTGCTCAATCTCACAGTCA+AGG + chr5_3:51243724-51243743 Msa0816710:CDS 45.0%
!! GCTTTGGAGCAACAAAAAGC+TGG + chr5_3:51244472-51244491 Msa0816710:CDS 45.0%
!! GTTTATGGTTCGGTTCAGGA+AGG + chr5_3:51244592-51244611 Msa0816710:intron 45.0%
AGTGTATACCAATTGGGTCC+GGG - chr5_3:51244692-51244711 None:intergenic 45.0%
CAGTGTATACCAATTGGGTC+CGG - chr5_3:51244693-51244712 None:intergenic 45.0%
TTGGTTCAGAACCACTGAAC+TGG - chr5_3:51244739-51244758 None:intergenic 45.0%
! CCACACCGAAAAGGTAGTTT+TGG - chr5_3:51244758-51244777 None:intergenic 45.0%
! CCAAAACTACCTTTTCGGTG+TGG + chr5_3:51244755-51244774 Msa0816710:intron 45.0%
!! ACTACCTTTTCGGTGTGGTT+CGG + chr5_3:51244760-51244779 Msa0816710:intron 45.0%
TAAACCGAACCACACCGAAA+AGG - chr5_3:51244767-51244786 None:intergenic 45.0%
!! TTCGGTGTGGTTCGGTTTAA+CGG + chr5_3:51244768-51244787 Msa0816710:intron 45.0%
GCAAAGTGGCAAGCTGATAA+TGG + chr5_3:51244829-51244848 Msa0816710:CDS 45.0%
!! CAAGCTGGATGATTTTGGCA+TGG - chr5_3:51244895-51244914 None:intergenic 45.0%
ACACGAATATCGGCACAACT+TGG - chr5_3:51245267-51245286 None:intergenic 45.0%
CTTCTGAACTGTGTTCGTTG+TGG + chr5_3:51245370-51245389 Msa0816710:CDS 45.0%
AGCACGAGTTTGACAACATG+AGG - chr5_3:51245618-51245637 None:intergenic 45.0%
AAGAGAGCGACTTTGCAAGA+AGG + chr5_3:51245942-51245961 Msa0816710:CDS 45.0%
AAGGGGAATGATATGAAGCC+TGG + chr5_3:51246007-51246026 Msa0816710:intron 45.0%
CTGTGGATCATGTTCCTGAA+AGG + chr5_3:51246738-51246757 Msa0816710:intron 45.0%
GGATCATGTTCCTGAAAGGT+TGG + chr5_3:51246742-51246761 Msa0816710:intron 45.0%
!! TGTTCCTGAAAGGTTGGTGT+TGG + chr5_3:51246748-51246767 Msa0816710:intron 45.0%
GATACTTCAAGCTTCTGTGG+AGG + chr5_3:51246858-51246877 Msa0816710:CDS 45.0%
!! AAAAATTAATAAAAACAAAT+TGG + chr5_3:51239257-51239276 Msa0816710:intron 5.0%
!! AAATAAAAAGTTTAAATTAA+GGG - chr5_3:51241246-51241265 None:intergenic 5.0%
!! AAAATAAAAAGTTTAAATTA+AGG - chr5_3:51241247-51241266 None:intergenic 5.0%
GTTCCGTAAGCTCGCTCAAA+TGG + chr5_3:51239525-51239544 Msa0816710:intron 50.0%
CAACTGGGATTCCGCTATAC+CGG - chr5_3:51240285-51240304 None:intergenic 50.0%
TAGCGGAATCCCAGTTGAGT+TGG + chr5_3:51240288-51240307 Msa0816710:CDS 50.0%
CGAGATACCACCAACTCAAC+TGG - chr5_3:51240301-51240320 None:intergenic 50.0%
GAACTCCTTAATCACGCCAC+TGG + chr5_3:51240428-51240447 Msa0816710:CDS 50.0%
CAATCCCAGTGGCGTGATTA+AGG - chr5_3:51240436-51240455 None:intergenic 50.0%
CTTAATCACGCCACTGGGAT+TGG + chr5_3:51240434-51240453 Msa0816710:CDS 50.0%
ACTACTCCTACCAATCCCAG+TGG - chr5_3:51240447-51240466 None:intergenic 50.0%
!! CGTTGTCCTGCTGATTTACC+AGG - chr5_3:51240685-51240704 None:intergenic 50.0%
GCATATGAAAGTCCCGTCTG+AGG - chr5_3:51240865-51240884 None:intergenic 50.0%
CGTGGTATATCGCAAACAGC+AGG - chr5_3:51241083-51241102 None:intergenic 50.0%
CAGAGAGAAGGCAACTCATC+TGG + chr5_3:51241714-51241733 Msa0816710:CDS 50.0%
! AAAGGCGGATCATCTGGCTT+TGG + chr5_3:51242254-51242273 Msa0816710:CDS 50.0%
! GGCGCTGAGTGAGAAATAAG+TGG + chr5_3:51242527-51242546 Msa0816710:intron 50.0%
GGCACCATAATGTTGAACCG+AGG + chr5_3:51242752-51242771 Msa0816710:intron 50.0%
! AACAGGTCACCTCTCTGAGA+AGG + chr5_3:51242784-51242803 Msa0816710:CDS 50.0%
CAGTTTGTATGGCCATGGAC+TGG + chr5_3:51243187-51243206 Msa0816710:CDS 50.0%
!! CCATCTTCGGTTTGGCTAGT+GGG - chr5_3:51243229-51243248 None:intergenic 50.0%
!! TCCATCTTCGGTTTGGCTAG+TGG - chr5_3:51243230-51243249 None:intergenic 50.0%
TGGAATTCATGGGGTCACAC+CGG + chr5_3:51243331-51243350 Msa0816710:CDS 50.0%
TCCAAACAAGGATCTTGCCG+AGG + chr5_3:51244286-51244305 Msa0816710:intron 50.0%
TCCTCGGCAAGATCCTTGTT+TGG - chr5_3:51244290-51244309 None:intergenic 50.0%
AAACCGTTGAGGGTTTGTCC+CGG + chr5_3:51244671-51244690 Msa0816710:intron 50.0%
! GGAGTTGTTCTTTTTGCCGC+TGG - chr5_3:51244874-51244893 None:intergenic 50.0%
GGAACAGTCACTTCGAGACA+TGG + chr5_3:51245060-51245079 Msa0816710:CDS 50.0%
TGAACTGCAGGAAGCTCGAA+AGG + chr5_3:51245129-51245148 Msa0816710:CDS 50.0%
!! GTTGTGGGAAGAGTACCTGA+AGG + chr5_3:51245386-51245405 Msa0816710:CDS 50.0%
AAGTGGGCGGTACATAACCT+CGG + chr5_3:51245896-51245915 Msa0816710:CDS 50.0%
!! CGGAATCCCAGTTGAGTTGG+TGG + chr5_3:51240291-51240310 Msa0816710:CDS 55.0%
ACAACTGAAACTCTCGGCCG+AGG - chr5_3:51240369-51240388 None:intergenic 55.0%
TGTTTCCTCTCGGGGCAGTA+CGG - chr5_3:51240392-51240411 None:intergenic 55.0%
! ATCACGCCACTGGGATTGGT+AGG + chr5_3:51240438-51240457 Msa0816710:CDS 55.0%
! TCAACAGGCTTTGACGGTCC+AGG - chr5_3:51241044-51241063 None:intergenic 55.0%
CACGGCTCCATGCTCTAACA+AGG + chr5_3:51241483-51241502 Msa0816710:CDS 55.0%
!! CTTGAACACGCTTCTGGGGT+CGG + chr5_3:51241664-51241683 Msa0816710:CDS 55.0%
CTTGAACATGCTTCCGGGGT+GGG + chr5_3:51242198-51242217 Msa0816710:CDS 55.0%
TGAGATACTCCAACCCACCC+CGG - chr5_3:51242214-51242233 None:intergenic 55.0%
!! ATGGCCATGGACTGGGATTG+TGG + chr5_3:51243195-51243214 Msa0816710:CDS 55.0%
CCCACTAGCCAAACCGAAGA+TGG + chr5_3:51243226-51243245 Msa0816710:CDS 55.0%
! CAAAGCGTTCGGACTCTACG+TGG - chr5_3:51243313-51243332 None:intergenic 55.0%
CACGTAGAGTCCGAACGCTT+TGG + chr5_3:51243311-51243330 Msa0816710:CDS 55.0%
GAATTCCACGACTGCAGCTC+CGG - chr5_3:51243353-51243372 None:intergenic 55.0%
GGCAACCCACGCATAAAGAC+CGG - chr5_3:51243479-51243498 None:intergenic 55.0%
GGGACAAACCCTCAACGGTT+TGG - chr5_3:51244672-51244691 None:intergenic 55.0%
AGTACCTGAAGGACCCTGAC+TGG + chr5_3:51245397-51245416 Msa0816710:CDS 55.0%
GAGGTTATGTACCGCCCACT+TGG - chr5_3:51245897-51245916 None:intergenic 55.0%
GCAGCCAACACCAACCTTTC+AGG - chr5_3:51246755-51246774 None:intergenic 55.0%
!! GAAAGGTTGGTGTTGGCTGC+AGG + chr5_3:51246755-51246774 Msa0816710:intron 55.0%
GTACTGCCCCGAGAGGAAAC+AGG + chr5_3:51240391-51240410 Msa0816710:CDS 60.0%
! CGACCCCAGAAGCGTGTTCA+AGG - chr5_3:51241666-51241685 None:intergenic 60.0%
! CCACCCCGGAAGCATGTTCA+AGG - chr5_3:51242200-51242219 None:intergenic 60.0%
CCTTGAACATGCTTCCGGGG+TGG + chr5_3:51242197-51242216 Msa0816710:CDS 60.0%
AACATGCTTCCGGGGTGGGT+TGG + chr5_3:51242202-51242221 Msa0816710:CDS 60.0%
GGTCCGGGACAAACCCTCAA+CGG - chr5_3:51244677-51244696 None:intergenic 60.0%
GGGTTTGTCCCGGACCCAAT+TGG + chr5_3:51244681-51244700 Msa0816710:intron 60.0%
GATGCCAGTCAGGGTCCTTC+AGG - chr5_3:51245404-51245423 None:intergenic 60.0%
GTTGTCCGTACTGCCCCGAG+AGG + chr5_3:51240384-51240403 Msa0816710:CDS 65.0%
TCACACCGGAGCTGCAGTCG+TGG + chr5_3:51243345-51243364 Msa0816710:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 51238838 51247223 51238838 ID=Msa0816710;Name=Msa0816710
chr5_3 mRNA 51238838 51247223 51238838 ID=Msa0816710-mRNA-1;Parent=Msa0816710;Name=Msa0816710-mRNA-1;_AED=0.08;_eAED=0.08;_QI=176|0.66|0.69|0.92|0.91|0.84|13|267|1206
chr5_3 exon 51238838 51238977 51238838 ID=Msa0816710-mRNA-1:exon:15387;Parent=Msa0816710-mRNA-1
chr5_3 exon 51240221 51240572 51240221 ID=Msa0816710-mRNA-1:exon:15388;Parent=Msa0816710-mRNA-1
chr5_3 exon 51240736 51241119 51240736 ID=Msa0816710-mRNA-1:exon:15389;Parent=Msa0816710-mRNA-1
chr5_3 exon 51241452 51241814 51241452 ID=Msa0816710-mRNA-1:exon:15390;Parent=Msa0816710-mRNA-1
chr5_3 exon 51241980 51242336 51241980 ID=Msa0816710-mRNA-1:exon:15391;Parent=Msa0816710-mRNA-1
chr5_3 exon 51242753 51243745 51242753 ID=Msa0816710-mRNA-1:exon:15392;Parent=Msa0816710-mRNA-1
chr5_3 exon 51243932 51244113 51243932 ID=Msa0816710-mRNA-1:exon:15393;Parent=Msa0816710-mRNA-1
chr5_3 exon 51244439 51244528 51244439 ID=Msa0816710-mRNA-1:exon:15394;Parent=Msa0816710-mRNA-1
chr5_3 exon 51244610 51244632 51244610 ID=Msa0816710-mRNA-1:exon:15395;Parent=Msa0816710-mRNA-1
chr5_3 exon 51244820 51245162 51244820 ID=Msa0816710-mRNA-1:exon:15396;Parent=Msa0816710-mRNA-1
chr5_3 exon 51245249 51245458 51245249 ID=Msa0816710-mRNA-1:exon:15397;Parent=Msa0816710-mRNA-1
chr5_3 exon 51245786 51245965 51245786 ID=Msa0816710-mRNA-1:exon:15398;Parent=Msa0816710-mRNA-1
chr5_3 exon 51246777 51247223 51246777 ID=Msa0816710-mRNA-1:exon:15399;Parent=Msa0816710-mRNA-1
chr5_3 five_prime_UTR 51238838 51238977 51238838 ID=Msa0816710-mRNA-1:five_prime_utr;Parent=Msa0816710-mRNA-1
chr5_3 five_prime_UTR 51240221 51240256 51240221 ID=Msa0816710-mRNA-1:five_prime_utr;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51240257 51240572 51240257 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51240736 51241119 51240736 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51241452 51241814 51241452 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51241980 51242336 51241980 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51242753 51243745 51242753 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51243932 51244113 51243932 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51244439 51244528 51244439 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51244610 51244632 51244610 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51244820 51245162 51244820 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51245249 51245458 51245249 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51245786 51245965 51245786 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 CDS 51246777 51246956 51246777 ID=Msa0816710-mRNA-1:cds;Parent=Msa0816710-mRNA-1
chr5_3 three_prime_UTR 51246957 51247223 51246957 ID=Msa0816710-mRNA-1:three_prime_utr;Parent=Msa0816710-mRNA-1
Gene Sequence

>Msa0816710

ATGGCTCACTGCTCTATCAAGGATACCGGTATAGCGGAATCCCAGTTGAGTTGGTGGTATCTCGTATCATCTTACGAAGAACTCAAAACAGGGAAACAAAAGGTAAAAACCTCGGCCGAGAGTTTCAGTTGTCCGTACTGCCCCGAGAGGAAACAGGATTATAAGTTAAATGAACTCCTTAATCACGCCACTGGGATTGGTAGGAGTAGTTCAGAGAAGAGAAGTGCTAAAGAGAAGGGTAGTCATTTGGCTTTGGTAAAATATTTGGAGCAAGATCTTAACAGTAAGGATGGTGCATCGAGACCTATAGATCAAGTTACGAACACAATAAGTCCAGGACAAACAGTAATGTCTCACTGTTCTATCAAGGATACCGATATAAGTTGGTGGTATGTAGATACAGCTTATGAAGAGCTCAAAAATGGAACTCGGAATGTGAAAACCTCAGACGGGACTTTCATATGCCCGTACTGCCCTAATAGAAAACAGGATTATTTGTACAGGGAACTCCTAGAACATGCTTTTATGGTTGGTCGGAGTAGTTCAGATAAGAGAAGTGCAAGAGAAAGAGCTAATCATCTTGCTTTGTTGAAATATTTGGAAAAGGATATTACGAGTATGCCTGGACCGTCAAAGCCTGTTGATAAAGGTGATCCTGATCCTGCTGTTTGCGATATACCACGGAAATTTTTTCGTTCTAGTACAAAATTGATAAGTCAAGGACAAACTGTCACGGCTCCATGCTCTAACAAGGATACTGGTTCAAGTGATCCTCGAATAAGTTGGTTGTATGTAGATAAATTTTATCAAGAACTCAAGAATGGAAGTCTCAAAGTGAGAATCTCAGATGAGGCTTTCACTTGTCCATACTGCCCGAAAATGAAAAAACCGGACTATGTGTACAGGGAAATCCTTGAACACGCTTCTGGGGTCGGTCAGAGTAGTTCGCAAAAGAGAGGTATCAGAGAGAAGGCAACTCATCTGGCTTTAATGAAATATTTGAAACAGGATATTATATATGTGCCTGCTCCATCAAAACCTGTGATTGAAGGTGATTCTTCTGGAGCCATGATACAAAGCCGAGAAGAAAATGCGACGACTCGCTGCTCCGACAAAGATTCTGATAAAAGTGCATCTCAAATAAATTTAGGGCAATTAAAAAGAACATATGAACAGCTCAAAAAGGGGATTCAAAACGTGAGAACCTCAGATAAGACTTTCACTTGCCCATACTGCCCTAATAATAAAAGGATAAAACGGGATTACGTGTACAGGGAAATCCTTGAACATGCTTCCGGGGTGGGTTGGAGTATCTCACAAACTAGAACTGACATTGAAAAGGCGGATCATCTGGCTTTGGTTAAATATTTGAAAAAGGATCTTATAAATGTCGGTGGTCCTTCAGAACCAACGAAGAAAGGCACCATAATGTTGAACCGAGGAGTAACTGTAACAGGTCACCTCTCTGAGAAGGATGCTAATAATAGTGCATCTCAAATAAATGCGTTGTTTGTAAATAAATCCTATGCAGAACTCAAGAAGGGAATTCACAAGGTCAAAACATCAGAAGATACTTTCTCATGTCCGTATTGCCCTAAGAGAAAATGCAATTATAGGTACAGCGAACTCCTTAATCATGCTTTAGGGGTAGGTCAAAGTGACGCACAAAGGAGAAGTGTATTGGAGAAGGCCAACCATCTAGCTTTAGTGAAATATTTGGAAAAGGATCTTATGACTATGAATGTGGAACGTCCGTTAAAGCCTGCAAATAAATATTTGGAAAACAATCTTATGAATGTGGAACAAAATCGAACAAAACCAGTGAATGAAAACATTCTTGTCAATTCTGAAAGGCAGTTTGTATGGCCATGGACTGGGATTGTGGTAAATATTCCCACTAGCCAAACCGAAGATGGACGATGTATTGGTGAAAGTGGTTCCAAGCTAAGGGATGAATATCGAATAAGGGGTTTTAATCCACGTAGAGTCCGAACGCTTTGGAATTCATGGGGTCACACCGGAGCTGCAGTCGTGGAATTCAATAAAAGTTGGCTAGGGTTATATAATGCATTGGCATTTGAAAGGGCGTATGAATTAGATTGTCACGGGAAAAAGGACTGGCTTTCTTGTAGTGAACAAAAATCCGGTCTTTATGCGTGGGTTGCCCGAGCTGATGACTACAAAGTGAACAACATAATCGGGGAACAACTACAAAAGATGGATGTTAAAACAATACCTGAAATCATGGAGCAAGATGCTAGAAGGTTCAATAGACTCGTGCAGAGTATGCATAACATTCTTCAAGTAAAGAACAACAAGATAAAAGAAATGGAAGTAGTATGCAATGAAATTACACTTCGCATGGACATTGTGATGGGCGAAATAGATAGACTTGCTCAATCTCACAGTCAAGAGATGAAGAAAATACAGTCAAGTGCAAATCAACACTTTCAGAGTGTTTTGAATGGTCATGAAAGGCTTAAGTTGCAACTGGAATCTCAGAAAAGAGAACTTGAGTTGCGAAGAATTGAACTGGAAAAACGTGAGGCACGTAATGAAAGTGAAAGGAAAAAGTTGGATGAAGAGATTAACAAGACTGCAACGAAAAATCACTTTCTTCAAATGGCTGCTTTGGAGCAACAAAAAGCTGGTGAAAATGTTTTGAAACTTGCTGCAGATCAAAAGGAAGGAAAACCTAATCTCATTCGTCTTAGTCAGCAAAGTGGCAAGCTGATAATGGTACTTGACTATCTATTTATCCAGCGGCAAAAAGAACAACTCCATGCCAAAATCATCCAGCTTGAAAAACAACTAAATGTGAAACAAAAACTGGAATTGGAGATTCAGCAACTAAGAGGAAAACTAAACGTCATGAAGCACATGGAAGATGATGGAGAACATGATGTTCTGGATATGATGGATGCCTTACATATAGATTTAAGAGAGAAGGAACAGTCACTTCGAGACATGGATGCATTGAACCAAACTCTGATCATTAAAGAGCGTAAGAGCAATGATGAACTGCAGGAAGCTCGAAAGGAATTGATTACTACCATTAAAGAGATGCCAAGTTGTGCCGATATTCGTGTGAAGAGAATGGGGGAGCTAGACTTTAGACCATTTCTAGAAGCTATGAAGAAAAAATATAATGAAGATGTTGCAGAAGATAGAGCTTCTGAACTGTGTTCGTTGTGGGAAGAGTACCTGAAGGACCCTGACTGGCATCCATTTAAAATTTCTACAATCCAAGAGAAACATCAGGAAGCTATAGACGATGAAGATGAAAAGCTGAATGAACTGAGAAACGAGATGGGCGAAGAAGTTTACAAAGCTGTGGTGGCAGCATTGAAAGAGATAAATGAATATAATCCAAGTGGGCGGTACATAACCTCGGAATTATGGAATTACGCAGAGGGAAAGAGAGCGACTTTGCAAGAAGGAGAATCATCACACATTGTTTTCTCGAAGGGAATCGTGCAGTTGAACATATTTAGGAAATACATCATATATTTGGCTTCACTTGATACTTCAAGCTTCTGTGGAGGTCTTTCTATCGTCACTGCTTTCATAACCACAAGCTTTGTGCTTATGCTTATTCATTTAGGTGGAGTTCGAAGTTAA
Protein sequence

>Msa0816710

MAHCSIKDTGIAESQLSWWYLVSSYEELKTGKQKVKTSAESFSCPYCPERKQDYKLNELLNHATGIGRSSSEKRSAKEKGSHLALVKYLEQDLNSKDGASRPIDQVTNTISPGQTVMSHCSIKDTDISWWYVDTAYEELKNGTRNVKTSDGTFICPYCPNRKQDYLYRELLEHAFMVGRSSSDKRSARERANHLALLKYLEKDITSMPGPSKPVDKGDPDPAVCDIPRKFFRSSTKLISQGQTVTAPCSNKDTGSSDPRISWLYVDKFYQELKNGSLKVRISDEAFTCPYCPKMKKPDYVYREILEHASGVGQSSSQKRGIREKATHLALMKYLKQDIIYVPAPSKPVIEGDSSGAMIQSREENATTRCSDKDSDKSASQINLGQLKRTYEQLKKGIQNVRTSDKTFTCPYCPNNKRIKRDYVYREILEHASGVGWSISQTRTDIEKADHLALVKYLKKDLINVGGPSEPTKKGTIMLNRGVTVTGHLSEKDANNSASQINALFVNKSYAELKKGIHKVKTSEDTFSCPYCPKRKCNYRYSELLNHALGVGQSDAQRRSVLEKANHLALVKYLEKDLMTMNVERPLKPANKYLENNLMNVEQNRTKPVNENILVNSERQFVWPWTGIVVNIPTSQTEDGRCIGESGSKLRDEYRIRGFNPRRVRTLWNSWGHTGAAVVEFNKSWLGLYNALAFERAYELDCHGKKDWLSCSEQKSGLYAWVARADDYKVNNIIGEQLQKMDVKTIPEIMEQDARRFNRLVQSMHNILQVKNNKIKEMEVVCNEITLRMDIVMGEIDRLAQSHSQEMKKIQSSANQHFQSVLNGHERLKLQLESQKRELELRRIELEKREARNESERKKLDEEINKTATKNHFLQMAALEQQKAGENVLKLAADQKEGKPNLIRLSQQSGKLIMVLDYLFIQRQKEQLHAKIIQLEKQLNVKQKLELEIQQLRGKLNVMKHMEDDGEHDVLDMMDALHIDLREKEQSLRDMDALNQTLIIKERKSNDELQEARKELITTIKEMPSCADIRVKRMGELDFRPFLEAMKKKYNEDVAEDRASELCSLWEEYLKDPDWHPFKISTIQEKHQEAIDDEDEKLNELRNEMGEEVYKAVVAALKEINEYNPSGRYITSELWNYAEGKRATLQEGESSHIVFSKGIVQLNIFRKYIIYLASLDTSSFCGGLSIVTAFITTSFVLMLIHLGGVRS*