Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795250 | XP_003611134.1 | 92.877 | 365 | 20 | 2 | 1 | 365 | 1 | 359 | 0.0 | 605 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795250 | sp|Q9T0D3|HFB2B_ARATH | 49.288 | 351 | 135 | 7 | 16 | 355 | 51 | 369 | 2.26e-89 | 276 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795250 | B7FM72 | 92.877 | 365 | 20 | 2 | 1 | 365 | 1 | 359 | 0.0 | 605 |
Gene ID | Type | Classification |
---|---|---|
Msa0795250 | TF | HSF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006110 | Msa0795250 | 0.819827 | 9.467468e-53 | -8.615850e-47 |
Msa0015390 | Msa0795250 | 0.807165 | 5.773726e-50 | -8.615850e-47 |
Msa0020410 | Msa0795250 | 0.806529 | 7.868639e-50 | -8.615850e-47 |
Msa0022550 | Msa0795250 | 0.823443 | 1.381437e-53 | -8.615850e-47 |
Msa0026910 | Msa0795250 | 0.808605 | 2.853016e-50 | -8.615850e-47 |
Msa0035150 | Msa0795250 | 0.822330 | 2.510229e-53 | -8.615850e-47 |
Msa0043980 | Msa0795250 | 0.819497 | 1.125726e-52 | -8.615850e-47 |
Msa0051630 | Msa0795250 | 0.801359 | 9.347071e-49 | -8.615850e-47 |
Msa0078650 | Msa0795250 | 0.806079 | 9.789794e-50 | -8.615850e-47 |
Msa0104800 | Msa0795250 | 0.800150 | 1.649549e-48 | -8.615850e-47 |
Msa0620230 | Msa0795250 | 0.819916 | 9.032127e-53 | -8.615850e-47 |
Msa0638610 | Msa0795250 | 0.823276 | 1.511421e-53 | -8.615850e-47 |
Msa0655560 | Msa0795250 | 0.801294 | 9.637593e-49 | -8.615850e-47 |
Msa0657750 | Msa0795250 | 0.827518 | 1.496603e-54 | -8.615850e-47 |
Msa0676180 | Msa0795250 | 0.800944 | 1.136134e-48 | -8.615850e-47 |
Msa0685750 | Msa0795250 | 0.804890 | 1.737998e-49 | -8.615850e-47 |
Msa0688070 | Msa0795250 | 0.807526 | 4.842768e-50 | -8.615850e-47 |
Msa0703050 | Msa0795250 | 0.814550 | 1.455464e-51 | -8.615850e-47 |
Msa0710270 | Msa0795250 | 0.806429 | 8.263186e-50 | -8.615850e-47 |
Msa0711130 | Msa0795250 | 0.809228 | 2.099166e-50 | -8.615850e-47 |
Msa0713820 | Msa0795250 | 0.802582 | 5.238795e-49 | -8.615850e-47 |
Msa0721230 | Msa0795250 | 0.838400 | 2.941380e-57 | -8.615850e-47 |
Msa0740510 | Msa0795250 | 0.807762 | 4.314576e-50 | -8.615850e-47 |
Msa0753460 | Msa0795250 | 0.840141 | 1.039427e-57 | -8.615850e-47 |
Msa0756060 | Msa0795250 | 0.815266 | 1.009752e-51 | -8.615850e-47 |
Msa0756380 | Msa0795250 | 0.801425 | 9.057396e-49 | -8.615850e-47 |
Msa0756540 | Msa0795250 | 0.804581 | 2.016797e-49 | -8.615850e-47 |
Msa0773590 | Msa0795250 | 0.803070 | 4.154412e-49 | -8.615850e-47 |
Msa0790890 | Msa0795250 | 0.825639 | 4.200324e-54 | -8.615850e-47 |
Msa0794510 | Msa0795250 | -0.801778 | 7.668078e-49 | -8.615850e-47 |
Msa0795250 | Msa0811040 | 0.805147 | 1.535753e-49 | -8.615850e-47 |
Msa0795250 | Msa0820770 | 0.810478 | 1.129693e-50 | -8.615850e-47 |
Msa0795250 | Msa0828920 | 0.815206 | 1.041138e-51 | -8.615850e-47 |
Msa0795250 | Msa0831590 | 0.800531 | 1.379518e-48 | -8.615850e-47 |
Msa0795250 | Msa0832340 | 0.836487 | 9.094731e-57 | -8.615850e-47 |
Msa0795250 | Msa0832700 | 0.860025 | 2.752389e-63 | -8.615850e-47 |
Msa0795250 | Msa0835280 | 0.803842 | 2.873620e-49 | -8.615850e-47 |
Msa0795250 | Msa0844570 | 0.820267 | 7.506883e-53 | -8.615850e-47 |
Msa0795250 | Msa0861090 | 0.809035 | 2.308465e-50 | -8.615850e-47 |
Msa0795250 | Msa0861540 | 0.820029 | 8.511443e-53 | -8.615850e-47 |
Msa0795250 | Msa0866410 | 0.811101 | 8.284688e-51 | -8.615850e-47 |
Msa0795250 | Msa0880450 | 0.802668 | 5.029971e-49 | -8.615850e-47 |
Msa0795250 | Msa0898660 | 0.802157 | 6.408893e-49 | -8.615850e-47 |
Msa0795250 | Msa0933100 | 0.830691 | 2.547209e-55 | -8.615850e-47 |
Msa0795250 | Msa0933230 | 0.804907 | 1.724568e-49 | -8.615850e-47 |
Msa0795250 | Msa0933310 | 0.803742 | 3.015454e-49 | -8.615850e-47 |
Msa0795250 | Msa0933450 | 0.816731 | 4.753851e-52 | -8.615850e-47 |
Msa0795250 | Msa0936390 | 0.802699 | 4.955283e-49 | -8.615850e-47 |
Msa0795250 | Msa0966400 | 0.816916 | 4.321367e-52 | -8.615850e-47 |
Msa0795250 | Msa0969450 | 0.800642 | 1.309326e-48 | -8.615850e-47 |
Msa0795250 | Msa0969520 | 0.835548 | 1.574144e-56 | -8.615850e-47 |
Msa0795250 | Msa0999100 | 0.801898 | 7.244849e-49 | -8.615850e-47 |
Msa0795250 | Msa1010350 | 0.813170 | 2.931421e-51 | -8.615850e-47 |
Msa0795250 | Msa1019710 | 0.816534 | 5.262487e-52 | -8.615850e-47 |
Msa0795250 | Msa1023920 | 0.805328 | 1.407735e-49 | -8.615850e-47 |
Msa0795250 | Msa1036300 | 0.824465 | 7.952878e-54 | -8.615850e-47 |
Msa0795250 | Msa1041670 | 0.810936 | 8.997128e-51 | -8.615850e-47 |
Msa0795250 | Msa1046280 | 0.825576 | 4.348687e-54 | -8.615850e-47 |
Msa0795250 | Msa1052830 | 0.800829 | 1.199386e-48 | -8.615850e-47 |
Msa0795250 | Msa1065610 | 0.826418 | 2.742514e-54 | -8.615850e-47 |
Msa0795250 | Msa1081330 | 0.801885 | 7.289610e-49 | -8.615850e-47 |
Msa0795250 | Msa1084430 | 0.847758 | 9.442700e-60 | -8.615850e-47 |
Msa0795250 | Msa1100050 | 0.802917 | 4.467629e-49 | -8.615850e-47 |
Msa0795250 | Msa1107900 | 0.807553 | 4.779105e-50 | -8.615850e-47 |
Msa0795250 | Msa1111180 | 0.804248 | 2.366407e-49 | -8.615850e-47 |
Msa0795250 | Msa1118110 | 0.801758 | 7.741459e-49 | -8.615850e-47 |
Msa0795250 | Msa1125660 | 0.819348 | 1.217835e-52 | -8.615850e-47 |
Msa0795250 | Msa1125720 | 0.836733 | 7.872135e-57 | -8.615850e-47 |
Msa0795250 | Msa1151910 | 0.803160 | 3.979402e-49 | -8.615850e-47 |
Msa0795250 | Msa1166560 | 0.813285 | 2.766249e-51 | -8.615850e-47 |
Msa0795250 | Msa1170170 | 0.851746 | 7.259637e-61 | -8.615850e-47 |
Msa0795250 | Msa1174040 | 0.811786 | 5.882326e-51 | -8.615850e-47 |
Msa0795250 | Msa1190920 | 0.811722 | 6.072799e-51 | -8.615850e-47 |
Msa0795250 | Msa1193290 | 0.807127 | 5.882176e-50 | -8.615850e-47 |
Msa0795250 | Msa1199570 | 0.823382 | 1.427324e-53 | -8.615850e-47 |
Msa0795250 | Msa1199830 | -0.813164 | 2.939649e-51 | -8.615850e-47 |
Msa0795250 | Msa1206100 | 0.801728 | 7.852834e-49 | -8.615850e-47 |
Msa0795250 | Msa1214890 | 0.816870 | 4.424420e-52 | -8.615850e-47 |
Msa0795250 | Msa1223870 | 0.822655 | 2.109175e-53 | -8.615850e-47 |
Msa0795250 | Msa1224480 | 0.811642 | 6.320975e-51 | -8.615850e-47 |
Msa0795250 | Msa1240510 | 0.852873 | 3.468569e-61 | -8.615850e-47 |
Msa0795250 | Msa1250530 | 0.830300 | 3.174304e-55 | -8.615850e-47 |
Msa0795250 | Msa1263060 | 0.823037 | 1.718236e-53 | -8.615850e-47 |
Msa0795250 | Msa1267900 | 0.812205 | 4.766090e-51 | -8.615850e-47 |
Msa0795250 | Msa1297290 | 0.809227 | 2.100472e-50 | -8.615850e-47 |
Msa0795250 | Msa1299950 | 0.800609 | 1.329867e-48 | -8.615850e-47 |
Msa0795250 | Msa1302550 | 0.831218 | 1.890844e-55 | -8.615850e-47 |
Msa0795250 | Msa1328640 | 0.807135 | 5.859450e-50 | -8.615850e-47 |
Msa0795250 | Msa1328710 | 0.824780 | 6.704401e-54 | -8.615850e-47 |
Msa0795250 | Msa1333730 | 0.800503 | 1.397985e-48 | -8.615850e-47 |
Msa0795250 | Msa1353470 | 0.813456 | 2.536895e-51 | -8.615850e-47 |
Msa0795250 | Msa1385000 | 0.807004 | 6.247603e-50 | -8.615850e-47 |
Msa0795250 | Msa1393040 | 0.808698 | 2.726016e-50 | -8.615850e-47 |
Msa0795250 | Msa1402400 | 0.805701 | 1.175786e-49 | -8.615850e-47 |
Msa0795250 | Msa1407600 | 0.816392 | 5.662553e-52 | -8.615850e-47 |
Msa0795250 | Msa1410690 | 0.801635 | 8.206300e-49 | -8.615850e-47 |
Msa0795250 | Msa1435270 | 0.819067 | 1.411073e-52 | -8.615850e-47 |
Msa0795250 | Msa1445030 | 0.807988 | 3.861299e-50 | -8.615850e-47 |
Msa0795250 | Msa1466540 | 0.800917 | 1.150631e-48 | -8.615850e-47 |
Msa0123300 | Msa0795250 | 0.800135 | 1.661489e-48 | -8.615850e-47 |
Msa0126370 | Msa0795250 | 0.813240 | 2.829493e-51 | -8.615850e-47 |
Msa0141620 | Msa0795250 | 0.803425 | 3.508479e-49 | -8.615850e-47 |
Msa0151180 | Msa0795250 | 0.823466 | 1.364318e-53 | -8.615850e-47 |
Msa0166870 | Msa0795250 | 0.805607 | 1.229964e-49 | -8.615850e-47 |
Msa0170570 | Msa0795250 | 0.820157 | 7.957724e-53 | -8.615850e-47 |
Msa0171120 | Msa0795250 | 0.806135 | 9.530380e-50 | -8.615850e-47 |
Msa0171290 | Msa0795250 | 0.819550 | 1.094877e-52 | -8.615850e-47 |
Msa0201500 | Msa0795250 | 0.820136 | 8.044446e-53 | -8.615850e-47 |
Msa0211150 | Msa0795250 | 0.801679 | 8.037163e-49 | -8.615850e-47 |
Msa0218350 | Msa0795250 | 0.828273 | 9.854768e-55 | -8.615850e-47 |
Msa0218370 | Msa0795250 | 0.822875 | 1.874780e-53 | -8.615850e-47 |
Msa0220440 | Msa0795250 | 0.806925 | 6.492589e-50 | -8.615850e-47 |
Msa0223910 | Msa0795250 | 0.807131 | 5.870254e-50 | -8.615850e-47 |
Msa0231240 | Msa0795250 | 0.800335 | 1.512246e-48 | -8.615850e-47 |
Msa0237310 | Msa0795250 | 0.813520 | 2.455464e-51 | -8.615850e-47 |
Msa0376350 | Msa0795250 | 0.800291 | 1.543817e-48 | -8.615850e-47 |
Msa0394860 | Msa0795250 | 0.804750 | 1.859653e-49 | -8.615850e-47 |
Msa0426640 | Msa0795250 | 0.807820 | 4.192714e-50 | -8.615850e-47 |
Msa0426900 | Msa0795250 | 0.831526 | 1.587970e-55 | -8.615850e-47 |
Msa0428590 | Msa0795250 | 0.811452 | 6.953394e-51 | -8.615850e-47 |
Msa0439970 | Msa0795250 | 0.807184 | 5.720778e-50 | -8.615850e-47 |
Msa0455760 | Msa0795250 | 0.801848 | 7.418822e-49 | -8.615850e-47 |
Msa0244960 | Msa0795250 | 0.802590 | 5.218992e-49 | -8.615850e-47 |
Msa0245940 | Msa0795250 | 0.828442 | 8.969730e-55 | -8.615850e-47 |
Msa0260780 | Msa0795250 | 0.816380 | 5.698881e-52 | -8.615850e-47 |
Msa0274730 | Msa0795250 | 0.813859 | 2.068002e-51 | -8.615850e-47 |
Msa0284520 | Msa0795250 | 0.814618 | 1.405429e-51 | -8.615850e-47 |
Msa0287410 | Msa0795250 | 0.819234 | 1.292732e-52 | -8.615850e-47 |
Msa0292930 | Msa0795250 | 0.805049 | 1.610636e-49 | -8.615850e-47 |
Msa0305700 | Msa0795250 | 0.800911 | 1.154010e-48 | -8.615850e-47 |
Msa0307300 | Msa0795250 | 0.811149 | 8.088129e-51 | -8.615850e-47 |
Msa0315530 | Msa0795250 | 0.815238 | 1.024171e-51 | -8.615850e-47 |
Msa0316810 | Msa0795250 | 0.800564 | 1.358256e-48 | -8.615850e-47 |
Msa0319170 | Msa0795250 | 0.800160 | 1.642046e-48 | -8.615850e-47 |
Msa0326110 | Msa0795250 | 0.809139 | 2.193184e-50 | -8.615850e-47 |
Msa0333920 | Msa0795250 | 0.814890 | 1.223716e-51 | -8.615850e-47 |
Msa0363790 | Msa0795250 | 0.823552 | 1.302464e-53 | -8.615850e-47 |
Msa0495320 | Msa0795250 | 0.829206 | 5.859213e-55 | -8.615850e-47 |
Msa0495330 | Msa0795250 | 0.813828 | 2.100945e-51 | -8.615850e-47 |
Msa0503060 | Msa0795250 | 0.802087 | 6.626581e-49 | -8.615850e-47 |
Msa0504780 | Msa0795250 | 0.812576 | 3.954928e-51 | -8.615850e-47 |
Msa0516170 | Msa0795250 | 0.803422 | 3.512154e-49 | -8.615850e-47 |
Msa0556100 | Msa0795250 | 0.806361 | 8.539578e-50 | -8.615850e-47 |
Msa0557320 | Msa0795250 | 0.803662 | 3.131997e-49 | -8.615850e-47 |
Msa0571130 | Msa0795250 | 0.866711 | 2.335394e-65 | -8.615850e-47 |
Msa0576880 | Msa0795250 | 0.808949 | 2.408032e-50 | -8.615850e-47 |
Msa0592820 | Msa0795250 | 0.819893 | 9.144541e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795250 | MtrunA17_Chr5g0397881 | 92.877 | 365 | 20 | 2 | 1 | 365 | 1 | 359 | 0.0 | 605 |
Msa0795250 | MtrunA17_Chr6g0472421 | 45.333 | 375 | 122 | 14 | 5 | 353 | 7 | 324 | 4.43e-80 | 248 |
Msa0795250 | MtrunA17_Chr1g0203601 | 45.773 | 343 | 117 | 11 | 6 | 347 | 5 | 279 | 2.58e-74 | 232 |
Msa0795250 | MtrunA17_Chr3g0134031 | 46.087 | 230 | 113 | 4 | 1 | 219 | 1 | 230 | 6.16e-60 | 197 |
Msa0795250 | MtrunA17_Chr5g0402291 | 50.495 | 202 | 83 | 4 | 17 | 215 | 2 | 189 | 1.37e-59 | 194 |
Msa0795250 | MtrunA17_Chr5g0441531 | 44.248 | 226 | 101 | 4 | 14 | 239 | 15 | 215 | 8.82e-58 | 188 |
Msa0795250 | MtrunA17_Chr7g0257331 | 44.724 | 199 | 75 | 3 | 18 | 216 | 16 | 179 | 3.37e-48 | 162 |
Msa0795250 | MtrunA17_Chr5g0410881 | 72.000 | 100 | 26 | 1 | 22 | 121 | 30 | 127 | 7.79e-46 | 163 |
Msa0795250 | MtrunA17_Chr8g0375041 | 42.211 | 199 | 85 | 3 | 17 | 215 | 2 | 170 | 8.75e-45 | 154 |
Msa0795250 | MtrunA17_Chr6g0467041 | 60.952 | 105 | 41 | 0 | 24 | 128 | 22 | 126 | 9.00e-43 | 151 |
Msa0795250 | MtrunA17_Chr7g0260331 | 65.957 | 94 | 32 | 0 | 22 | 115 | 47 | 140 | 3.34e-42 | 150 |
Msa0795250 | MtrunA17_Chr1g0185131 | 67.021 | 94 | 31 | 0 | 22 | 115 | 30 | 123 | 5.51e-42 | 149 |
Msa0795250 | MtrunA17_Chr8g0379701 | 64.356 | 101 | 35 | 1 | 15 | 115 | 4 | 103 | 1.74e-41 | 150 |
Msa0795250 | MtrunA17_Chr4g0039891 | 63.265 | 98 | 36 | 0 | 24 | 121 | 12 | 109 | 1.59e-40 | 149 |
Msa0795250 | MtrunA17_Chr4g0047421 | 37.624 | 202 | 89 | 3 | 21 | 218 | 30 | 198 | 3.60e-40 | 141 |
Msa0795250 | MtrunA17_Chr8g0378061 | 60.577 | 104 | 41 | 0 | 25 | 128 | 23 | 126 | 7.01e-40 | 147 |
Msa0795250 | MtrunA17_Chr3g0135831 | 62.500 | 96 | 36 | 0 | 22 | 117 | 44 | 139 | 3.22e-38 | 140 |
Msa0795250 | MtrunA17_Chr4g0071051 | 63.441 | 93 | 34 | 0 | 22 | 114 | 99 | 191 | 5.48e-38 | 140 |
Msa0795250 | MtrunA17_Chr1g0204741 | 63.830 | 94 | 34 | 0 | 22 | 115 | 38 | 131 | 1.33e-37 | 137 |
Msa0795250 | MtrunA17_Chr6g0485571 | 59.184 | 98 | 40 | 0 | 18 | 115 | 5 | 102 | 4.51e-37 | 137 |
Msa0795250 | MtrunA17_Chr2g0330821 | 52.137 | 117 | 56 | 0 | 12 | 128 | 67 | 183 | 7.93e-37 | 136 |
Msa0795250 | MtrunA17_Chr2g0284481 | 51.240 | 121 | 58 | 1 | 11 | 131 | 3 | 122 | 1.36e-36 | 136 |
Msa0795250 | MtrunA17_Chr8g0392001 | 59.140 | 93 | 37 | 1 | 24 | 115 | 22 | 114 | 2.76e-32 | 124 |
Msa0795250 | MtrunA17_Chr1g0179321 | 63.636 | 66 | 24 | 0 | 18 | 83 | 43 | 108 | 2.97e-24 | 95.9 |
Msa0795250 | MtrunA17_Chr4g0023771 | 54.054 | 74 | 32 | 2 | 11 | 83 | 3 | 75 | 3.10e-19 | 82.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0795250 | AT4G11660.1 | 49.288 | 351 | 135 | 7 | 16 | 355 | 51 | 369 | 2.30e-90 | 276 |
Msa0795250 | AT5G62020.1 | 46.302 | 311 | 116 | 8 | 1 | 305 | 1 | 266 | 3.16e-81 | 250 |
Msa0795250 | AT4G36990.1 | 50.242 | 207 | 86 | 3 | 12 | 218 | 2 | 191 | 9.76e-62 | 199 |
Msa0795250 | AT1G46264.1 | 46.341 | 205 | 105 | 3 | 19 | 219 | 29 | 232 | 9.09e-59 | 194 |
Msa0795250 | AT2G41690.1 | 40.930 | 215 | 110 | 2 | 4 | 218 | 20 | 217 | 1.38e-48 | 164 |
Msa0795250 | AT1G32330.1 | 65.289 | 121 | 38 | 2 | 1 | 121 | 16 | 132 | 8.72e-47 | 166 |
Msa0795250 | AT1G32330.2 | 65.289 | 121 | 38 | 2 | 1 | 121 | 16 | 132 | 9.27e-47 | 166 |
Msa0795250 | AT4G17750.1 | 61.667 | 120 | 46 | 0 | 2 | 121 | 30 | 149 | 1.81e-46 | 165 |
Msa0795250 | AT3G02990.1 | 66.355 | 107 | 34 | 2 | 9 | 115 | 10 | 114 | 1.06e-42 | 155 |
Msa0795250 | AT3G22830.1 | 67.347 | 98 | 32 | 0 | 18 | 115 | 55 | 152 | 6.78e-42 | 151 |
Msa0795250 | AT4G13980.1 | 60.000 | 110 | 38 | 1 | 25 | 128 | 24 | 133 | 3.07e-40 | 148 |
Msa0795250 | AT5G16820.1 | 67.708 | 96 | 30 | 1 | 20 | 115 | 24 | 118 | 8.25e-40 | 147 |
Msa0795250 | AT5G16820.2 | 67.708 | 96 | 30 | 1 | 20 | 115 | 24 | 118 | 8.25e-40 | 147 |
Msa0795250 | AT5G43840.1 | 63.830 | 94 | 34 | 0 | 22 | 115 | 17 | 110 | 2.54e-39 | 141 |
Msa0795250 | AT2G26150.1 | 61.702 | 94 | 36 | 0 | 22 | 115 | 42 | 135 | 5.64e-39 | 142 |
Msa0795250 | AT2G26150.4 | 61.702 | 94 | 36 | 0 | 22 | 115 | 42 | 135 | 5.64e-39 | 142 |
Msa0795250 | AT3G63350.1 | 58.763 | 97 | 40 | 0 | 18 | 114 | 22 | 118 | 1.56e-38 | 139 |
Msa0795250 | AT5G03720.2 | 64.211 | 95 | 33 | 1 | 21 | 115 | 53 | 146 | 5.24e-38 | 141 |
Msa0795250 | AT5G03720.1 | 64.211 | 95 | 33 | 1 | 21 | 115 | 53 | 146 | 5.24e-38 | 141 |
Msa0795250 | AT5G54070.1 | 60.638 | 94 | 37 | 0 | 21 | 114 | 68 | 161 | 1.12e-37 | 138 |
Msa0795250 | AT3G51910.1 | 60.215 | 93 | 37 | 0 | 22 | 114 | 27 | 119 | 1.13e-37 | 137 |
Msa0795250 | AT3G24520.1 | 65.217 | 92 | 32 | 0 | 24 | 115 | 17 | 108 | 1.31e-36 | 135 |
Msa0795250 | AT4G18880.1 | 58.824 | 119 | 46 | 2 | 17 | 135 | 9 | 124 | 4.41e-35 | 133 |
Msa0795250 | AT5G45710.3 | 58.621 | 116 | 44 | 3 | 20 | 135 | 10 | 121 | 1.49e-34 | 130 |
Msa0795250 | AT5G45710.1 | 58.621 | 116 | 44 | 3 | 20 | 135 | 10 | 121 | 1.49e-34 | 130 |
Msa0795250 | AT1G67970.1 | 60.215 | 93 | 36 | 1 | 24 | 115 | 19 | 111 | 1.14e-33 | 128 |
Msa0795250 | AT4G18870.1 | 45.263 | 95 | 49 | 1 | 20 | 111 | 139 | 233 | 1.27e-22 | 96.7 |
Msa0795250 | AT4G18870.1 | 47.191 | 89 | 42 | 3 | 25 | 111 | 14 | 99 | 3.50e-20 | 90.1 |
Msa0795250 | AT1G77570.1 | 39.326 | 89 | 49 | 3 | 25 | 109 | 27 | 114 | 2.76e-13 | 67.4 |
Find 133 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATGTTCCTAAGCTGTTT+GGG | 0.204418 | 5_3:-7187389 | Msa0795250:CDS |
TCTTCTTCCGACTCCGTTTC+CGG | 0.215561 | 5_3:-7188634 | Msa0795250:five_prime_UTR |
TGTAACAGAAGGGAAAATTT+TGG | 0.225929 | 5_3:-7187532 | Msa0795250:CDS |
TAAAGGCCGTGTTTGGAATT+TGG | 0.236573 | 5_3:-7187147 | Msa0795250:three_prime_UTR |
GTGTTTATTTCTAGGGATTT+CGG | 0.268121 | 5_3:-7188013 | Msa0795250:intron |
AAGCTGTTTGGGGTTTCAAT+TGG | 0.272470 | 5_3:-7187378 | Msa0795250:CDS |
CCTCATGTTCCTAAGCTGTT+TGG | 0.281935 | 5_3:-7187390 | Msa0795250:CDS |
GGTAATGAAACATTCCTTAT+AGG | 0.295244 | 5_3:+7187501 | None:intergenic |
ATGATGAGTAATTATGCTTC+TGG | 0.326687 | 5_3:-7187609 | Msa0795250:CDS |
TCCCACAAGCATGTCTAAAA+AGG | 0.327270 | 5_3:+7186792 | None:intergenic |
ATGGAACAAGCTTCATAGTT+TGG | 0.332696 | 5_3:-7188207 | Msa0795250:CDS |
CCGTTGATGATTTGGTTTCA+TGG | 0.341139 | 5_3:-7188237 | Msa0795250:CDS |
AACGTATTCTATCTCTTTCA+AGG | 0.350975 | 5_3:-7188599 | Msa0795250:intron |
ATTGAGTTGACGAACGAAAC+TGG | 0.358502 | 5_3:+7188126 | None:intergenic |
ATGGTGTCTCCAGCAACTTC+TGG | 0.358649 | 5_3:-7187819 | Msa0795250:CDS |
TGATTCTTCCGTTGATGATT+TGG | 0.364300 | 5_3:-7188245 | Msa0795250:CDS |
AGGAGAGGATAGGAATAAAA+AGG | 0.370793 | 5_3:+7188717 | None:intergenic |
GAAGTTGATGGCGACATTAC+CGG | 0.375837 | 5_3:-7188353 | Msa0795250:exon |
AGCTGTTTGGGGTTTCAATT+GGG | 0.377393 | 5_3:-7187377 | Msa0795250:CDS |
AGCAACTTCTGGTGATGAAC+AGG | 0.397317 | 5_3:-7187808 | Msa0795250:CDS |
TTATTGTGTTTGAAATACTT+TGG | 0.401377 | 5_3:+7188154 | None:intergenic |
AATACTATAATTATGTTACT+TGG | 0.403069 | 5_3:+7186651 | None:intergenic |
CAGACACTAGCTGGTGTCAT+TGG | 0.404857 | 5_3:-7187068 | Msa0795250:three_prime_UTR |
TGCTGCGACGGCACGGGGCG+TGG | 0.405775 | 5_3:-7187556 | Msa0795250:CDS |
CTTAATGTGGGTGGAGCTGC+TGG | 0.418056 | 5_3:-7187462 | Msa0795250:CDS |
TCTAATTTGATACATGTACT+AGG | 0.423269 | 5_3:-7186704 | Msa0795250:three_prime_UTR |
ATAGTGGTAAAGGCCGTGTT+TGG | 0.429939 | 5_3:-7187154 | Msa0795250:exon |
CTACCACCGGCGACGGCGTT+AGG | 0.435384 | 5_3:+7188659 | None:intergenic |
TACGAGTGCTGCGACGGCAC+GGG | 0.438079 | 5_3:-7187562 | Msa0795250:CDS |
GACGGAGAATGAGGTTGAAC+CGG | 0.444512 | 5_3:-7187340 | Msa0795250:CDS |
TTTGGAATTTGGATTATGTC+GGG | 0.453154 | 5_3:-7187136 | Msa0795250:three_prime_UTR |
ATACGTTGAAATATTCTAAC+CGG | 0.455917 | 5_3:+7188615 | None:intergenic |
CGGATGATCAAGAGCGTCGT+TGG | 0.460641 | 5_3:-7187188 | Msa0795250:CDS |
GCCATAGCTGTTCCTGCTGC+CGG | 0.467534 | 5_3:+7187897 | None:intergenic |
GTTTGGAATTTGGATTATGT+CGG | 0.467678 | 5_3:-7187137 | Msa0795250:three_prime_UTR |
TTGGTTTCATGGAATGAAGA+TGG | 0.472004 | 5_3:-7188226 | Msa0795250:CDS |
TGTTCATCACCAGAAGTTGC+TGG | 0.476217 | 5_3:+7187810 | None:intergenic |
GGTGTAATTAGGAACAGATC+TGG | 0.477002 | 5_3:-7188380 | Msa0795250:five_prime_UTR |
AGAGATTCTAGAAGTTTCGA+AGG | 0.477691 | 5_3:+7188697 | None:intergenic |
GCACCATTGTTCACCGCAAT+CGG | 0.477786 | 5_3:+7187765 | None:intergenic |
CGCTAACCTAACGCCGTCGC+CGG | 0.479775 | 5_3:-7188665 | Msa0795250:five_prime_UTR |
ACATGAGGAGCCTCAACCTC+TGG | 0.480477 | 5_3:+7187405 | None:intergenic |
TGAAATATTCTAACCGGAAA+CGG | 0.485093 | 5_3:+7188621 | None:intergenic |
AGATCTGGAAAAGAAGTTGA+TGG | 0.487529 | 5_3:-7188365 | Msa0795250:exon |
ATGTGAGATGACGAGTTTGA+TGG | 0.490539 | 5_3:-7187430 | Msa0795250:CDS |
GATTCACCTGTTTGCTCCAC+CGG | 0.494684 | 5_3:+7188334 | None:intergenic |
ACATTACCGGTGGAGCAAAC+AGG | 0.498008 | 5_3:-7188340 | Msa0795250:CDS |
TGAACCGGAGAGAGAGGAAC+GGG | 0.498202 | 5_3:-7187325 | Msa0795250:CDS |
CATGGCTAACAGACACTAGC+TGG | 0.498441 | 5_3:-7187077 | Msa0795250:three_prime_UTR |
ATGTTACTTGGAAACAAAGT+TGG | 0.498921 | 5_3:+7186663 | None:intergenic |
GCTGGAGACACCATTCTAAC+CGG | 0.500615 | 5_3:+7187828 | None:intergenic |
ACTAGGATGCTTCCACCCTA+TGG | 0.501720 | 5_3:-7186687 | Msa0795250:three_prime_UTR |
GTTGGAAATTGACGAAATAG+TGG | 0.503816 | 5_3:-7187170 | Msa0795250:exon |
GTCGAATTCATCTCCGATTG+CGG | 0.505685 | 5_3:-7187778 | Msa0795250:CDS |
ATTGAAACCCCAAACAGCTT+AGG | 0.506033 | 5_3:+7187381 | None:intergenic |
CAATTGGGCTTAAACGATGT+AGG | 0.509913 | 5_3:-7187362 | Msa0795250:CDS |
TTAGCAAATTCCCACCGGTC+AGG | 0.510367 | 5_3:+7187981 | None:intergenic |
TCATTCTCTTCAACTAACTC+CGG | 0.512986 | 5_3:+7187708 | None:intergenic |
TTCGGAAAGTTGTACCTGAC+CGG | 0.514506 | 5_3:-7187995 | Msa0795250:CDS |
CTACGAGTGCTGCGACGGCA+CGG | 0.515613 | 5_3:-7187563 | Msa0795250:CDS |
TTCTAGAAGTTTCGAAGGAG+AGG | 0.516926 | 5_3:+7188702 | None:intergenic |
ATCTTCTACGAGTGCTGCGA+CGG | 0.517274 | 5_3:-7187568 | Msa0795250:CDS |
TGTTCCCGTTCCTCTCTCTC+CGG | 0.518493 | 5_3:+7187321 | None:intergenic |
ATTCTAACCGGAAACGGAGT+CGG | 0.518554 | 5_3:+7188627 | None:intergenic |
TGGAAACAAAGTTGGTCCAT+AGG | 0.519124 | 5_3:+7186671 | None:intergenic |
GGAAACAAAGTTGGTCCATA+GGG | 0.527244 | 5_3:+7186672 | None:intergenic |
CTGTTAGCCATGTTCAAACA+TGG | 0.530720 | 5_3:+7187088 | None:intergenic |
TATGGCGGCACCGGTTAGAA+TGG | 0.532149 | 5_3:-7187838 | Msa0795250:CDS |
AATTGACGAAATAGTGGTAA+AGG | 0.534223 | 5_3:-7187164 | Msa0795250:exon |
AAAAGGAGCGTGTGTGTTGG+TGG | 0.534804 | 5_3:+7188734 | None:intergenic |
TCATGTTCCTAAGCTGTTTG+GGG | 0.536796 | 5_3:-7187388 | Msa0795250:CDS |
AACAGTAGCTATGGCGGCAC+CGG | 0.542259 | 5_3:-7187847 | Msa0795250:CDS |
TGAGGTTGAACCGGAGAGAG+AGG | 0.546548 | 5_3:-7187331 | Msa0795250:CDS |
CATGAGTTGCACCACTGCGC+CGG | 0.546633 | 5_3:-7187727 | Msa0795250:CDS |
CGGTGGGAATTTGCTAATGA+CGG | 0.547176 | 5_3:-7187975 | Msa0795250:CDS |
GGTGGAGCAAACAGGTGAAT+CGG | 0.547365 | 5_3:-7188332 | Msa0795250:CDS |
GCCGGCAGCAGGAACAGCTA+TGG | 0.547975 | 5_3:-7187898 | Msa0795250:CDS |
TAATACTGTAACAGTAGCTA+TGG | 0.548334 | 5_3:-7187856 | Msa0795250:CDS |
TCTTTCTCTAAGCAAAATTG+TGG | 0.554230 | 5_3:+7186887 | None:intergenic |
ACGATGTAGGACGGAGAATG+AGG | 0.556638 | 5_3:-7187349 | Msa0795250:CDS |
TTTGATGGAACCAGAGGTTG+AGG | 0.559905 | 5_3:-7187415 | Msa0795250:CDS |
ACGAGTGCTGCGACGGCACG+GGG | 0.561173 | 5_3:-7187561 | Msa0795250:CDS |
CTAGCTGGTGTCATTGGACA+AGG | 0.568184 | 5_3:-7187062 | Msa0795250:three_prime_UTR |
AAATCTCTAGCAAATTCAGC+AGG | 0.569125 | 5_3:+7188181 | None:intergenic |
ACGCTTGCTTGAGCAAAGCA+TGG | 0.569500 | 5_3:+7186942 | None:intergenic |
TGGTGATGGTGATGGTGACT+CGG | 0.574712 | 5_3:-7187208 | Msa0795250:CDS |
TCTCCGATTGCGGTGAACAA+TGG | 0.579507 | 5_3:-7187768 | Msa0795250:CDS |
CGGGGCGTGGTTGTAACAGA+AGG | 0.579523 | 5_3:-7187543 | Msa0795250:CDS |
GAAGTTTCGAAGGAGAGGAT+AGG | 0.579811 | 5_3:+7188707 | None:intergenic |
AACAGGTGAATCGGCGACGG+CGG | 0.583900 | 5_3:-7188323 | Msa0795250:CDS |
AATGAGCTAAGTCAATTGAA+AGG | 0.584859 | 5_3:-7187654 | Msa0795250:CDS |
CCTCGTGATGGTGATGGTGA+TGG | 0.588325 | 5_3:-7187216 | Msa0795250:CDS |
ATCAAACTCGTCATCTCACA+TGG | 0.596646 | 5_3:+7187432 | None:intergenic |
GAAGAAACTACCACCGGCGA+CGG | 0.600474 | 5_3:+7188652 | None:intergenic |
AAAGGAGCGTGTGTGTTGGT+GGG | 0.603469 | 5_3:+7188735 | None:intergenic |
AACAAAGTTGGTCCATAGGG+TGG | 0.604166 | 5_3:+7186675 | None:intergenic |
GCAAACAGGTGAATCGGCGA+CGG | 0.608757 | 5_3:-7188326 | Msa0795250:CDS |
AACTTCTGGTGATGAACAGG+TGG | 0.612326 | 5_3:-7187805 | Msa0795250:CDS |
AGTTAGTTGAAGAGAATGAA+AGG | 0.612844 | 5_3:-7187704 | Msa0795250:CDS |
CCATGAAACCAAATCATCAA+CGG | 0.613347 | 5_3:+7188237 | None:intergenic |
AAGGAATGTTTCATTACCTG+AGG | 0.613712 | 5_3:-7187496 | Msa0795250:CDS |
GGAAAGTTGTACCTGACCGG+TGG | 0.614886 | 5_3:-7187992 | Msa0795250:CDS |
TCTGAACCTCGTGATGGTGA+TGG | 0.617342 | 5_3:-7187222 | Msa0795250:CDS |
ATTTGCTTCGAGATATTCAG+CGG | 0.621869 | 5_3:-7187932 | Msa0795250:CDS |
TTCAACTAACTCCGGCGCAG+TGG | 0.622278 | 5_3:+7187716 | None:intergenic |
GATGCAAACACAATCCTCGC+AGG | 0.623759 | 5_3:-7187271 | Msa0795250:CDS |
GCAGGAGACTGATCGAGGAT+CGG | 0.626303 | 5_3:-7187253 | Msa0795250:CDS |
GACGAGTTTGATGGAACCAG+AGG | 0.628378 | 5_3:-7187421 | Msa0795250:CDS |
TCCTCGCAGGAGACTGATCG+AGG | 0.628520 | 5_3:-7187258 | Msa0795250:CDS |
GAAAGTTGTACCTGACCGGT+GGG | 0.631205 | 5_3:-7187991 | Msa0795250:CDS |
TACTGTAACAGTAGCTATGG+CGG | 0.634074 | 5_3:-7187853 | Msa0795250:CDS |
AATGTGGGTGGAGCTGCTGG+CGG | 0.634893 | 5_3:-7187459 | Msa0795250:CDS |
GGAAAATGTAGTGCTTAATG+TGG | 0.635559 | 5_3:-7187475 | Msa0795250:CDS |
TTGAACCGGAGAGAGAGGAA+CGG | 0.637385 | 5_3:-7187326 | Msa0795250:CDS |
AATGTAGTGCTTAATGTGGG+TGG | 0.639772 | 5_3:-7187471 | Msa0795250:CDS |
ATGACACCCATGTTTGAACA+TGG | 0.639922 | 5_3:-7187095 | Msa0795250:three_prime_UTR |
CCAAACAGCTTAGGAACATG+AGG | 0.642433 | 5_3:+7187390 | None:intergenic |
GAAAATGTAGTGCTTAATGT+GGG | 0.644997 | 5_3:-7187474 | Msa0795250:CDS |
CGTCATTAGCAAATTCCCAC+CGG | 0.646656 | 5_3:+7187976 | None:intergenic |
CATAATCCAAATTCCAAACA+CGG | 0.652013 | 5_3:+7187141 | None:intergenic |
TAACCTAACGCCGTCGCCGG+TGG | 0.652771 | 5_3:-7188662 | Msa0795250:five_prime_UTR |
TGGGCTTAAACGATGTAGGA+CGG | 0.657843 | 5_3:-7187358 | Msa0795250:CDS |
TCCTCGATCAGTCTCCTGCG+AGG | 0.667916 | 5_3:+7187257 | None:intergenic |
AGGAACAGCTATGGCGACAG+CGG | 0.668564 | 5_3:-7187889 | Msa0795250:CDS |
GGGGCGTGGTTGTAACAGAA+GGG | 0.668865 | 5_3:-7187542 | Msa0795250:CDS |
AAGGAGCGTGTGTGTTGGTG+GGG | 0.675490 | 5_3:+7188736 | None:intergenic |
GTTGATGGCGACATTACCGG+TGG | 0.679162 | 5_3:-7188350 | Msa0795250:exon |
GCTAATGACGGATTTCGACG+AGG | 0.685443 | 5_3:-7187963 | Msa0795250:CDS |
TCGGAAGAAGAAACTACCAC+CGG | 0.692996 | 5_3:+7188646 | None:intergenic |
TGTTAGCCATGTTCAAACAT+GGG | 0.695320 | 5_3:+7187089 | None:intergenic |
GTGAAATCTGAACCTCGTGA+TGG | 0.700758 | 5_3:-7187228 | Msa0795250:CDS |
CCATCACCATCACCATCACG+AGG | 0.701913 | 5_3:+7187216 | None:intergenic |
TAGCTGGTGTCATTGGACAA+GGG | 0.714141 | 5_3:-7187061 | Msa0795250:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATTATGATGTTAAATA+TGG | + | chr5_3:7186927-7186946 | None:intergenic | 10.0% |
!! | AATTATTATGATGTTAAATA+TGG | + | chr5_3:7186927-7186946 | None:intergenic | 10.0% |
!! | ATAGATTATTAGATTAGAAT+AGG | - | chr5_3:7186897-7186916 | Msa0795250:three_prime_UTR | 15.0% |
!!! | CATAATAATTTTGTTTGATT+AGG | - | chr5_3:7186937-7186956 | Msa0795250:three_prime_UTR | 15.0% |
!! | AAAAAAGAAAGTAAAACAAA+AGG | + | chr5_3:7187311-7187330 | None:intergenic | 15.0% |
!!! | TTTGTTTTACTTTCTTTTTT+AGG | - | chr5_3:7187311-7187330 | Msa0795250:CDS | 15.0% |
!!! | TAAATTTTGTGTTTATTTCT+AGG | - | chr5_3:7187349-7187368 | Msa0795250:CDS | 15.0% |
!!! | AAATTTTGTGTTTATTTCTA+GGG | - | chr5_3:7187350-7187369 | Msa0795250:CDS | 15.0% |
!! | AATACTATAATTATGTTACT+TGG | + | chr5_3:7188722-7188741 | None:intergenic | 15.0% |
!! | ATAGATTATTAGATTAGAAT+AGG | - | chr5_3:7186897-7186916 | Msa0795250:three_prime_UTR | 15.0% |
!!! | CATAATAATTTTGTTTGATT+AGG | - | chr5_3:7186937-7186956 | Msa0795250:three_prime_UTR | 15.0% |
!! | AAAAAAGAAAGTAAAACAAA+AGG | + | chr5_3:7187311-7187330 | None:intergenic | 15.0% |
!!! | TTTGTTTTACTTTCTTTTTT+AGG | - | chr5_3:7187311-7187330 | Msa0795250:CDS | 15.0% |
!!! | TAAATTTTGTGTTTATTTCT+AGG | - | chr5_3:7187349-7187368 | Msa0795250:CDS | 15.0% |
!!! | AAATTTTGTGTTTATTTCTA+GGG | - | chr5_3:7187350-7187369 | Msa0795250:CDS | 15.0% |
!! | AATACTATAATTATGTTACT+TGG | + | chr5_3:7188722-7188741 | None:intergenic | 15.0% |
!! | ACAAAGTATGATATTAACTA+AGG | + | chr5_3:7186838-7186857 | None:intergenic | 20.0% |
!! | ATGAACTAGATACAAAAATT+AGG | - | chr5_3:7186968-7186987 | Msa0795250:three_prime_UTR | 20.0% |
!! | TGAACTAGATACAAAAATTA+GGG | - | chr5_3:7186969-7186988 | Msa0795250:three_prime_UTR | 20.0% |
!!! | TTATTGTGTTTGAAATACTT+TGG | + | chr5_3:7187219-7187238 | None:intergenic | 20.0% |
!! | ACAAAGTATGATATTAACTA+AGG | + | chr5_3:7186838-7186857 | None:intergenic | 20.0% |
!! | ATGAACTAGATACAAAAATT+AGG | - | chr5_3:7186968-7186987 | Msa0795250:three_prime_UTR | 20.0% |
!! | TGAACTAGATACAAAAATTA+GGG | - | chr5_3:7186969-7186988 | Msa0795250:three_prime_UTR | 20.0% |
!!! | TTATTGTGTTTGAAATACTT+TGG | + | chr5_3:7187219-7187238 | None:intergenic | 20.0% |
! | ATACGTTGAAATATTCTAAC+CGG | + | chr5_3:7186758-7186777 | None:intergenic | 25.0% |
! | TATACTAAGCATGCATAATA+CGG | + | chr5_3:7186874-7186893 | None:intergenic | 25.0% |
! | ACAAAAATTAGGGTGTAATT+AGG | - | chr5_3:7186979-7186998 | Msa0795250:three_prime_UTR | 25.0% |
! | TCTAATTTGATACATGTACT+AGG | - | chr5_3:7188666-7188685 | Msa0795250:five_prime_UTR | 25.0% |
! | ATACGTTGAAATATTCTAAC+CGG | + | chr5_3:7186758-7186777 | None:intergenic | 25.0% |
! | TATACTAAGCATGCATAATA+CGG | + | chr5_3:7186874-7186893 | None:intergenic | 25.0% |
! | ACAAAAATTAGGGTGTAATT+AGG | - | chr5_3:7186979-7186998 | Msa0795250:three_prime_UTR | 25.0% |
! | TCTAATTTGATACATGTACT+AGG | - | chr5_3:7188666-7188685 | Msa0795250:five_prime_UTR | 25.0% |
TGAAATATTCTAACCGGAAA+CGG | + | chr5_3:7186752-7186771 | None:intergenic | 30.0% | |
AACGTATTCTATCTCTTTCA+AGG | - | chr5_3:7186771-7186790 | Msa0795250:three_prime_UTR | 30.0% | |
!! | GTGTTTATTTCTAGGGATTT+CGG | - | chr5_3:7187357-7187376 | Msa0795250:CDS | 30.0% |
TAATACTGTAACAGTAGCTA+TGG | - | chr5_3:7187514-7187533 | Msa0795250:CDS | 30.0% | |
AGTTAGTTGAAGAGAATGAA+AGG | - | chr5_3:7187666-7187685 | Msa0795250:CDS | 30.0% | |
AATGAGCTAAGTCAATTGAA+AGG | - | chr5_3:7187716-7187735 | Msa0795250:CDS | 30.0% | |
ATGATGAGTAATTATGCTTC+TGG | - | chr5_3:7187761-7187780 | Msa0795250:CDS | 30.0% | |
! | TGTAACAGAAGGGAAAATTT+TGG | - | chr5_3:7187838-7187857 | Msa0795250:CDS | 30.0% |
! | TTTTGGATCTTTTGCCTATA+AGG | - | chr5_3:7187855-7187874 | Msa0795250:CDS | 30.0% |
GGTAATGAAACATTCCTTAT+AGG | + | chr5_3:7187872-7187891 | None:intergenic | 30.0% | |
GAAAATGTAGTGCTTAATGT+GGG | - | chr5_3:7187896-7187915 | Msa0795250:CDS | 30.0% | |
AATTGACGAAATAGTGGTAA+AGG | - | chr5_3:7188206-7188225 | Msa0795250:CDS | 30.0% | |
CATAATCCAAATTCCAAACA+CGG | + | chr5_3:7188232-7188251 | None:intergenic | 30.0% | |
! | GTTTGGAATTTGGATTATGT+CGG | - | chr5_3:7188233-7188252 | Msa0795250:CDS | 30.0% |
! | TTTGGAATTTGGATTATGTC+GGG | - | chr5_3:7188234-7188253 | Msa0795250:CDS | 30.0% |
!! | GGTGTCATGTTTCAAATTTT+AGG | + | chr5_3:7188263-7188282 | None:intergenic | 30.0% |
TCTTTCTCTAAGCAAAATTG+TGG | + | chr5_3:7188486-7188505 | None:intergenic | 30.0% | |
! | ATGTTACTTGGAAACAAAGT+TGG | + | chr5_3:7188710-7188729 | None:intergenic | 30.0% |
TGAAATATTCTAACCGGAAA+CGG | + | chr5_3:7186752-7186771 | None:intergenic | 30.0% | |
AACGTATTCTATCTCTTTCA+AGG | - | chr5_3:7186771-7186790 | Msa0795250:three_prime_UTR | 30.0% | |
!! | GTGTTTATTTCTAGGGATTT+CGG | - | chr5_3:7187357-7187376 | Msa0795250:CDS | 30.0% |
TAATACTGTAACAGTAGCTA+TGG | - | chr5_3:7187514-7187533 | Msa0795250:CDS | 30.0% | |
AGTTAGTTGAAGAGAATGAA+AGG | - | chr5_3:7187666-7187685 | Msa0795250:CDS | 30.0% | |
AATGAGCTAAGTCAATTGAA+AGG | - | chr5_3:7187716-7187735 | Msa0795250:CDS | 30.0% | |
ATGATGAGTAATTATGCTTC+TGG | - | chr5_3:7187761-7187780 | Msa0795250:CDS | 30.0% | |
! | TGTAACAGAAGGGAAAATTT+TGG | - | chr5_3:7187838-7187857 | Msa0795250:CDS | 30.0% |
! | TTTTGGATCTTTTGCCTATA+AGG | - | chr5_3:7187855-7187874 | Msa0795250:CDS | 30.0% |
GGTAATGAAACATTCCTTAT+AGG | + | chr5_3:7187872-7187891 | None:intergenic | 30.0% | |
GAAAATGTAGTGCTTAATGT+GGG | - | chr5_3:7187896-7187915 | Msa0795250:CDS | 30.0% | |
AATTGACGAAATAGTGGTAA+AGG | - | chr5_3:7188206-7188225 | Msa0795250:CDS | 30.0% | |
CATAATCCAAATTCCAAACA+CGG | + | chr5_3:7188232-7188251 | None:intergenic | 30.0% | |
! | GTTTGGAATTTGGATTATGT+CGG | - | chr5_3:7188233-7188252 | Msa0795250:CDS | 30.0% |
! | TTTGGAATTTGGATTATGTC+GGG | - | chr5_3:7188234-7188253 | Msa0795250:CDS | 30.0% |
!! | GGTGTCATGTTTCAAATTTT+AGG | + | chr5_3:7188263-7188282 | None:intergenic | 30.0% |
TCTTTCTCTAAGCAAAATTG+TGG | + | chr5_3:7188486-7188505 | None:intergenic | 30.0% | |
! | ATGTTACTTGGAAACAAAGT+TGG | + | chr5_3:7188710-7188729 | None:intergenic | 30.0% |
AGGAGAGGATAGGAATAAAA+AGG | + | chr5_3:7186656-7186675 | None:intergenic | 35.0% | |
! | AGAGATTCTAGAAGTTTCGA+AGG | + | chr5_3:7186676-7186695 | None:intergenic | 35.0% |
AGATCTGGAAAAGAAGTTGA+TGG | - | chr5_3:7187005-7187024 | Msa0795250:three_prime_UTR | 35.0% | |
! | TGATACGTTTTCGTCAGAAA+CGG | + | chr5_3:7187096-7187115 | None:intergenic | 35.0% |
!! | TGATTCTTCCGTTGATGATT+TGG | - | chr5_3:7187125-7187144 | Msa0795250:three_prime_UTR | 35.0% |
CCATGAAACCAAATCATCAA+CGG | + | chr5_3:7187136-7187155 | None:intergenic | 35.0% | |
TTGGTTTCATGGAATGAAGA+TGG | - | chr5_3:7187144-7187163 | Msa0795250:three_prime_UTR | 35.0% | |
ATGGAACAAGCTTCATAGTT+TGG | - | chr5_3:7187163-7187182 | Msa0795250:exon | 35.0% | |
AAATCTCTAGCAAATTCAGC+AGG | + | chr5_3:7187192-7187211 | None:intergenic | 35.0% | |
ATTTGCTTCGAGATATTCAG+CGG | - | chr5_3:7187438-7187457 | Msa0795250:CDS | 35.0% | |
TCATTCTCTTCAACTAACTC+CGG | + | chr5_3:7187665-7187684 | None:intergenic | 35.0% | |
AAGGAATGTTTCATTACCTG+AGG | - | chr5_3:7187874-7187893 | Msa0795250:CDS | 35.0% | |
! | TTAAGCACTACATTTTCCTC+AGG | + | chr5_3:7187893-7187912 | None:intergenic | 35.0% |
GGAAAATGTAGTGCTTAATG+TGG | - | chr5_3:7187895-7187914 | Msa0795250:CDS | 35.0% | |
GTTGGAAATTGACGAAATAG+TGG | - | chr5_3:7188200-7188219 | Msa0795250:CDS | 35.0% | |
TGTTAGCCATGTTCAAACAT+GGG | + | chr5_3:7188284-7188303 | None:intergenic | 35.0% | |
! | TCCTTTTTAGACATGCTTGT+GGG | - | chr5_3:7188577-7188596 | Msa0795250:intron | 35.0% |
AGGAGAGGATAGGAATAAAA+AGG | + | chr5_3:7186656-7186675 | None:intergenic | 35.0% | |
! | AGAGATTCTAGAAGTTTCGA+AGG | + | chr5_3:7186676-7186695 | None:intergenic | 35.0% |
AGATCTGGAAAAGAAGTTGA+TGG | - | chr5_3:7187005-7187024 | Msa0795250:three_prime_UTR | 35.0% | |
! | TGATACGTTTTCGTCAGAAA+CGG | + | chr5_3:7187096-7187115 | None:intergenic | 35.0% |
!! | TGATTCTTCCGTTGATGATT+TGG | - | chr5_3:7187125-7187144 | Msa0795250:three_prime_UTR | 35.0% |
CCATGAAACCAAATCATCAA+CGG | + | chr5_3:7187136-7187155 | None:intergenic | 35.0% | |
TTGGTTTCATGGAATGAAGA+TGG | - | chr5_3:7187144-7187163 | Msa0795250:three_prime_UTR | 35.0% | |
ATGGAACAAGCTTCATAGTT+TGG | - | chr5_3:7187163-7187182 | Msa0795250:exon | 35.0% | |
AAATCTCTAGCAAATTCAGC+AGG | + | chr5_3:7187192-7187211 | None:intergenic | 35.0% | |
ATTTGCTTCGAGATATTCAG+CGG | - | chr5_3:7187438-7187457 | Msa0795250:CDS | 35.0% | |
TCATTCTCTTCAACTAACTC+CGG | + | chr5_3:7187665-7187684 | None:intergenic | 35.0% | |
AAGGAATGTTTCATTACCTG+AGG | - | chr5_3:7187874-7187893 | Msa0795250:CDS | 35.0% | |
! | TTAAGCACTACATTTTCCTC+AGG | + | chr5_3:7187893-7187912 | None:intergenic | 35.0% |
GGAAAATGTAGTGCTTAATG+TGG | - | chr5_3:7187895-7187914 | Msa0795250:CDS | 35.0% | |
GTTGGAAATTGACGAAATAG+TGG | - | chr5_3:7188200-7188219 | Msa0795250:CDS | 35.0% | |
TGTTAGCCATGTTCAAACAT+GGG | + | chr5_3:7188284-7188303 | None:intergenic | 35.0% | |
! | TCCTTTTTAGACATGCTTGT+GGG | - | chr5_3:7188577-7188596 | Msa0795250:intron | 35.0% |
! | ATAAAAAGGAGCGTGTGTGT+TGG | + | chr5_3:7186642-7186661 | None:intergenic | 40.0% |
! | TTCTAGAAGTTTCGAAGGAG+AGG | + | chr5_3:7186671-7186690 | None:intergenic | 40.0% |
GGTGTAATTAGGAACAGATC+TGG | - | chr5_3:7186990-7187009 | Msa0795250:three_prime_UTR | 40.0% | |
!! | CCGTTGATGATTTGGTTTCA+TGG | - | chr5_3:7187133-7187152 | Msa0795250:three_prime_UTR | 40.0% |
!! | ATTGAGTTGACGAACGAAAC+TGG | + | chr5_3:7187247-7187266 | None:intergenic | 40.0% |
TCAGCGGAGAAAAATATTGC+CGG | - | chr5_3:7187454-7187473 | Msa0795250:CDS | 40.0% | |
TACTGTAACAGTAGCTATGG+CGG | - | chr5_3:7187517-7187536 | Msa0795250:CDS | 40.0% | |
AATGTAGTGCTTAATGTGGG+TGG | - | chr5_3:7187899-7187918 | Msa0795250:CDS | 40.0% | |
ATCAAACTCGTCATCTCACA+TGG | + | chr5_3:7187941-7187960 | None:intergenic | 40.0% | |
ATGTGAGATGACGAGTTTGA+TGG | - | chr5_3:7187940-7187959 | Msa0795250:CDS | 40.0% | |
CTCATGTTCCTAAGCTGTTT+GGG | - | chr5_3:7187981-7188000 | Msa0795250:CDS | 40.0% | |
TCATGTTCCTAAGCTGTTTG+GGG | - | chr5_3:7187982-7188001 | Msa0795250:CDS | 40.0% | |
ATTGAAACCCCAAACAGCTT+AGG | + | chr5_3:7187992-7188011 | None:intergenic | 40.0% | |
! | AAGCTGTTTGGGGTTTCAAT+TGG | - | chr5_3:7187992-7188011 | Msa0795250:CDS | 40.0% |
! | AGCTGTTTGGGGTTTCAATT+GGG | - | chr5_3:7187993-7188012 | Msa0795250:CDS | 40.0% |
CAATTGGGCTTAAACGATGT+AGG | - | chr5_3:7188008-7188027 | Msa0795250:intron | 40.0% | |
! | TAAAGGCCGTGTTTGGAATT+TGG | - | chr5_3:7188223-7188242 | Msa0795250:CDS | 40.0% |
ATGACACCCATGTTTGAACA+TGG | - | chr5_3:7188275-7188294 | Msa0795250:CDS | 40.0% | |
CTGTTAGCCATGTTCAAACA+TGG | + | chr5_3:7188285-7188304 | None:intergenic | 40.0% | |
! | GTCCTTTTTAGACATGCTTG+TGG | - | chr5_3:7188576-7188595 | Msa0795250:intron | 40.0% |
TCCCACAAGCATGTCTAAAA+AGG | + | chr5_3:7188581-7188600 | None:intergenic | 40.0% | |
! | GGAAACAAAGTTGGTCCATA+GGG | + | chr5_3:7188701-7188720 | None:intergenic | 40.0% |
! | TGGAAACAAAGTTGGTCCAT+AGG | + | chr5_3:7188702-7188721 | None:intergenic | 40.0% |
! | ATAAAAAGGAGCGTGTGTGT+TGG | + | chr5_3:7186642-7186661 | None:intergenic | 40.0% |
! | TTCTAGAAGTTTCGAAGGAG+AGG | + | chr5_3:7186671-7186690 | None:intergenic | 40.0% |
GGTGTAATTAGGAACAGATC+TGG | - | chr5_3:7186990-7187009 | Msa0795250:three_prime_UTR | 40.0% | |
!! | CCGTTGATGATTTGGTTTCA+TGG | - | chr5_3:7187133-7187152 | Msa0795250:three_prime_UTR | 40.0% |
!! | ATTGAGTTGACGAACGAAAC+TGG | + | chr5_3:7187247-7187266 | None:intergenic | 40.0% |
TCAGCGGAGAAAAATATTGC+CGG | - | chr5_3:7187454-7187473 | Msa0795250:CDS | 40.0% | |
TACTGTAACAGTAGCTATGG+CGG | - | chr5_3:7187517-7187536 | Msa0795250:CDS | 40.0% | |
AATGTAGTGCTTAATGTGGG+TGG | - | chr5_3:7187899-7187918 | Msa0795250:CDS | 40.0% | |
ATCAAACTCGTCATCTCACA+TGG | + | chr5_3:7187941-7187960 | None:intergenic | 40.0% | |
ATGTGAGATGACGAGTTTGA+TGG | - | chr5_3:7187940-7187959 | Msa0795250:CDS | 40.0% | |
CTCATGTTCCTAAGCTGTTT+GGG | - | chr5_3:7187981-7188000 | Msa0795250:CDS | 40.0% | |
TCATGTTCCTAAGCTGTTTG+GGG | - | chr5_3:7187982-7188001 | Msa0795250:CDS | 40.0% | |
ATTGAAACCCCAAACAGCTT+AGG | + | chr5_3:7187992-7188011 | None:intergenic | 40.0% | |
! | AAGCTGTTTGGGGTTTCAAT+TGG | - | chr5_3:7187992-7188011 | Msa0795250:CDS | 40.0% |
! | AGCTGTTTGGGGTTTCAATT+GGG | - | chr5_3:7187993-7188012 | Msa0795250:CDS | 40.0% |
CAATTGGGCTTAAACGATGT+AGG | - | chr5_3:7188008-7188027 | Msa0795250:intron | 40.0% | |
! | TAAAGGCCGTGTTTGGAATT+TGG | - | chr5_3:7188223-7188242 | Msa0795250:CDS | 40.0% |
ATGACACCCATGTTTGAACA+TGG | - | chr5_3:7188275-7188294 | Msa0795250:CDS | 40.0% | |
CTGTTAGCCATGTTCAAACA+TGG | + | chr5_3:7188285-7188304 | None:intergenic | 40.0% | |
! | GTCCTTTTTAGACATGCTTG+TGG | - | chr5_3:7188576-7188595 | Msa0795250:intron | 40.0% |
TCCCACAAGCATGTCTAAAA+AGG | + | chr5_3:7188581-7188600 | None:intergenic | 40.0% | |
! | GGAAACAAAGTTGGTCCATA+GGG | + | chr5_3:7188701-7188720 | None:intergenic | 40.0% |
! | TGGAAACAAAGTTGGTCCAT+AGG | + | chr5_3:7188702-7188721 | None:intergenic | 40.0% |
GAAGTTTCGAAGGAGAGGAT+AGG | + | chr5_3:7186666-7186685 | None:intergenic | 45.0% | |
TCGGAAGAAGAAACTACCAC+CGG | + | chr5_3:7186727-7186746 | None:intergenic | 45.0% | |
ATTCTAACCGGAAACGGAGT+CGG | + | chr5_3:7186746-7186765 | None:intergenic | 45.0% | |
!! | GAAGTTGATGGCGACATTAC+CGG | - | chr5_3:7187017-7187036 | Msa0795250:three_prime_UTR | 45.0% |
TTCGGAAAGTTGTACCTGAC+CGG | - | chr5_3:7187375-7187394 | Msa0795250:CDS | 45.0% | |
CGTCATTAGCAAATTCCCAC+CGG | + | chr5_3:7187397-7187416 | None:intergenic | 45.0% | |
!! | CGGTGGGAATTTGCTAATGA+CGG | - | chr5_3:7187395-7187414 | Msa0795250:CDS | 45.0% |
AGAAAAATATTGCCGGCAGC+AGG | - | chr5_3:7187461-7187480 | Msa0795250:CDS | 45.0% | |
TGTTCATCACCAGAAGTTGC+TGG | + | chr5_3:7187563-7187582 | None:intergenic | 45.0% | |
! | AGCAACTTCTGGTGATGAAC+AGG | - | chr5_3:7187562-7187581 | Msa0795250:CDS | 45.0% |
! | AACTTCTGGTGATGAACAGG+TGG | - | chr5_3:7187565-7187584 | Msa0795250:CDS | 45.0% |
GTCGAATTCATCTCCGATTG+CGG | - | chr5_3:7187592-7187611 | Msa0795250:CDS | 45.0% | |
TTTGATGGAACCAGAGGTTG+AGG | - | chr5_3:7187955-7187974 | Msa0795250:CDS | 45.0% | |
CCAAACAGCTTAGGAACATG+AGG | + | chr5_3:7187983-7188002 | None:intergenic | 45.0% | |
CCTCATGTTCCTAAGCTGTT+TGG | - | chr5_3:7187980-7187999 | Msa0795250:CDS | 45.0% | |
TGGGCTTAAACGATGTAGGA+CGG | - | chr5_3:7188012-7188031 | Msa0795250:intron | 45.0% | |
GTGAAATCTGAACCTCGTGA+TGG | - | chr5_3:7188142-7188161 | Msa0795250:CDS | 45.0% | |
ATAGTGGTAAAGGCCGTGTT+TGG | - | chr5_3:7188216-7188235 | Msa0795250:CDS | 45.0% | |
!! | TAGCTGGTGTCATTGGACAA+GGG | - | chr5_3:7188309-7188328 | Msa0795250:CDS | 45.0% |
! | AACAAAGTTGGTCCATAGGG+TGG | + | chr5_3:7188698-7188717 | None:intergenic | 45.0% |
GAAGTTTCGAAGGAGAGGAT+AGG | + | chr5_3:7186666-7186685 | None:intergenic | 45.0% | |
TCGGAAGAAGAAACTACCAC+CGG | + | chr5_3:7186727-7186746 | None:intergenic | 45.0% | |
ATTCTAACCGGAAACGGAGT+CGG | + | chr5_3:7186746-7186765 | None:intergenic | 45.0% | |
!! | GAAGTTGATGGCGACATTAC+CGG | - | chr5_3:7187017-7187036 | Msa0795250:three_prime_UTR | 45.0% |
TTCGGAAAGTTGTACCTGAC+CGG | - | chr5_3:7187375-7187394 | Msa0795250:CDS | 45.0% | |
CGTCATTAGCAAATTCCCAC+CGG | + | chr5_3:7187397-7187416 | None:intergenic | 45.0% | |
!! | CGGTGGGAATTTGCTAATGA+CGG | - | chr5_3:7187395-7187414 | Msa0795250:CDS | 45.0% |
AGAAAAATATTGCCGGCAGC+AGG | - | chr5_3:7187461-7187480 | Msa0795250:CDS | 45.0% | |
TGTTCATCACCAGAAGTTGC+TGG | + | chr5_3:7187563-7187582 | None:intergenic | 45.0% | |
! | AGCAACTTCTGGTGATGAAC+AGG | - | chr5_3:7187562-7187581 | Msa0795250:CDS | 45.0% |
! | AACTTCTGGTGATGAACAGG+TGG | - | chr5_3:7187565-7187584 | Msa0795250:CDS | 45.0% |
GTCGAATTCATCTCCGATTG+CGG | - | chr5_3:7187592-7187611 | Msa0795250:CDS | 45.0% | |
TTTGATGGAACCAGAGGTTG+AGG | - | chr5_3:7187955-7187974 | Msa0795250:CDS | 45.0% | |
CCAAACAGCTTAGGAACATG+AGG | + | chr5_3:7187983-7188002 | None:intergenic | 45.0% | |
CCTCATGTTCCTAAGCTGTT+TGG | - | chr5_3:7187980-7187999 | Msa0795250:CDS | 45.0% | |
TGGGCTTAAACGATGTAGGA+CGG | - | chr5_3:7188012-7188031 | Msa0795250:intron | 45.0% | |
GTGAAATCTGAACCTCGTGA+TGG | - | chr5_3:7188142-7188161 | Msa0795250:CDS | 45.0% | |
ATAGTGGTAAAGGCCGTGTT+TGG | - | chr5_3:7188216-7188235 | Msa0795250:CDS | 45.0% | |
!! | TAGCTGGTGTCATTGGACAA+GGG | - | chr5_3:7188309-7188328 | Msa0795250:CDS | 45.0% |
! | AACAAAGTTGGTCCATAGGG+TGG | + | chr5_3:7188698-7188717 | None:intergenic | 45.0% |
!! | AAAATTAATTAATTGATTAT+AGG | + | chr5_3:7186815-7186834 | None:intergenic | 5.0% |
!! | AAAATTAATTAATTGATTAT+AGG | + | chr5_3:7186815-7186834 | None:intergenic | 5.0% |
! | AAAGGAGCGTGTGTGTTGGT+GGG | + | chr5_3:7186638-7186657 | None:intergenic | 50.0% |
! | AAAAGGAGCGTGTGTGTTGG+TGG | + | chr5_3:7186639-7186658 | None:intergenic | 50.0% |
TCTTCTTCCGACTCCGTTTC+CGG | - | chr5_3:7186736-7186755 | Msa0795250:three_prime_UTR | 50.0% | |
ACATTACCGGTGGAGCAAAC+AGG | - | chr5_3:7187030-7187049 | Msa0795250:three_prime_UTR | 50.0% | |
GATTCACCTGTTTGCTCCAC+CGG | + | chr5_3:7187039-7187058 | None:intergenic | 50.0% | |
GGTGGAGCAAACAGGTGAAT+CGG | - | chr5_3:7187038-7187057 | Msa0795250:three_prime_UTR | 50.0% | |
! | GTTTTCGTCAGAAACGGCGT+CGG | + | chr5_3:7187090-7187109 | None:intergenic | 50.0% |
GAAAGTTGTACCTGACCGGT+GGG | - | chr5_3:7187379-7187398 | Msa0795250:CDS | 50.0% | |
TTAGCAAATTCCCACCGGTC+AGG | + | chr5_3:7187392-7187411 | None:intergenic | 50.0% | |
!! | GCTAATGACGGATTTCGACG+AGG | - | chr5_3:7187407-7187426 | Msa0795250:CDS | 50.0% |
GCTGGAGACACCATTCTAAC+CGG | + | chr5_3:7187545-7187564 | None:intergenic | 50.0% | |
ATGGTGTCTCCAGCAACTTC+TGG | - | chr5_3:7187551-7187570 | Msa0795250:CDS | 50.0% | |
TCTCCGATTGCGGTGAACAA+TGG | - | chr5_3:7187602-7187621 | Msa0795250:CDS | 50.0% | |
GCACCATTGTTCACCGCAAT+CGG | + | chr5_3:7187608-7187627 | None:intergenic | 50.0% | |
! | ATCTTCTACGAGTGCTGCGA+CGG | - | chr5_3:7187802-7187821 | Msa0795250:CDS | 50.0% |
GACGAGTTTGATGGAACCAG+AGG | - | chr5_3:7187949-7187968 | Msa0795250:CDS | 50.0% | |
ACGATGTAGGACGGAGAATG+AGG | - | chr5_3:7188021-7188040 | Msa0795250:intron | 50.0% | |
GACGGAGAATGAGGTTGAAC+CGG | - | chr5_3:7188030-7188049 | Msa0795250:intron | 50.0% | |
TTGAACCGGAGAGAGAGGAA+CGG | - | chr5_3:7188044-7188063 | Msa0795250:intron | 50.0% | |
GATGCAAACACAATCCTCGC+AGG | - | chr5_3:7188099-7188118 | Msa0795250:intron | 50.0% | |
! | TCTGAACCTCGTGATGGTGA+TGG | - | chr5_3:7188148-7188167 | Msa0795250:CDS | 50.0% |
!! | TGGTGATGGTGATGGTGACT+CGG | - | chr5_3:7188162-7188181 | Msa0795250:CDS | 50.0% |
CATGGCTAACAGACACTAGC+TGG | - | chr5_3:7188293-7188312 | Msa0795250:CDS | 50.0% | |
!! | CAGACACTAGCTGGTGTCAT+TGG | - | chr5_3:7188302-7188321 | Msa0795250:CDS | 50.0% |
!! | CTAGCTGGTGTCATTGGACA+AGG | - | chr5_3:7188308-7188327 | Msa0795250:CDS | 50.0% |
ACGCTTGCTTGAGCAAAGCA+TGG | + | chr5_3:7188431-7188450 | None:intergenic | 50.0% | |
ACTAGGATGCTTCCACCCTA+TGG | - | chr5_3:7188683-7188702 | Msa0795250:five_prime_UTR | 50.0% | |
! | AAAGGAGCGTGTGTGTTGGT+GGG | + | chr5_3:7186638-7186657 | None:intergenic | 50.0% |
! | AAAAGGAGCGTGTGTGTTGG+TGG | + | chr5_3:7186639-7186658 | None:intergenic | 50.0% |
TCTTCTTCCGACTCCGTTTC+CGG | - | chr5_3:7186736-7186755 | Msa0795250:three_prime_UTR | 50.0% | |
ACATTACCGGTGGAGCAAAC+AGG | - | chr5_3:7187030-7187049 | Msa0795250:three_prime_UTR | 50.0% | |
GATTCACCTGTTTGCTCCAC+CGG | + | chr5_3:7187039-7187058 | None:intergenic | 50.0% | |
GGTGGAGCAAACAGGTGAAT+CGG | - | chr5_3:7187038-7187057 | Msa0795250:three_prime_UTR | 50.0% | |
! | GTTTTCGTCAGAAACGGCGT+CGG | + | chr5_3:7187090-7187109 | None:intergenic | 50.0% |
GAAAGTTGTACCTGACCGGT+GGG | - | chr5_3:7187379-7187398 | Msa0795250:CDS | 50.0% | |
TTAGCAAATTCCCACCGGTC+AGG | + | chr5_3:7187392-7187411 | None:intergenic | 50.0% | |
!! | GCTAATGACGGATTTCGACG+AGG | - | chr5_3:7187407-7187426 | Msa0795250:CDS | 50.0% |
GCTGGAGACACCATTCTAAC+CGG | + | chr5_3:7187545-7187564 | None:intergenic | 50.0% | |
ATGGTGTCTCCAGCAACTTC+TGG | - | chr5_3:7187551-7187570 | Msa0795250:CDS | 50.0% | |
TCTCCGATTGCGGTGAACAA+TGG | - | chr5_3:7187602-7187621 | Msa0795250:CDS | 50.0% | |
GCACCATTGTTCACCGCAAT+CGG | + | chr5_3:7187608-7187627 | None:intergenic | 50.0% | |
! | ATCTTCTACGAGTGCTGCGA+CGG | - | chr5_3:7187802-7187821 | Msa0795250:CDS | 50.0% |
GACGAGTTTGATGGAACCAG+AGG | - | chr5_3:7187949-7187968 | Msa0795250:CDS | 50.0% | |
ACGATGTAGGACGGAGAATG+AGG | - | chr5_3:7188021-7188040 | Msa0795250:intron | 50.0% | |
GACGGAGAATGAGGTTGAAC+CGG | - | chr5_3:7188030-7188049 | Msa0795250:intron | 50.0% | |
TTGAACCGGAGAGAGAGGAA+CGG | - | chr5_3:7188044-7188063 | Msa0795250:intron | 50.0% | |
GATGCAAACACAATCCTCGC+AGG | - | chr5_3:7188099-7188118 | Msa0795250:intron | 50.0% | |
! | TCTGAACCTCGTGATGGTGA+TGG | - | chr5_3:7188148-7188167 | Msa0795250:CDS | 50.0% |
!! | TGGTGATGGTGATGGTGACT+CGG | - | chr5_3:7188162-7188181 | Msa0795250:CDS | 50.0% |
CATGGCTAACAGACACTAGC+TGG | - | chr5_3:7188293-7188312 | Msa0795250:CDS | 50.0% | |
!! | CAGACACTAGCTGGTGTCAT+TGG | - | chr5_3:7188302-7188321 | Msa0795250:CDS | 50.0% |
!! | CTAGCTGGTGTCATTGGACA+AGG | - | chr5_3:7188308-7188327 | Msa0795250:CDS | 50.0% |
ACGCTTGCTTGAGCAAAGCA+TGG | + | chr5_3:7188431-7188450 | None:intergenic | 50.0% | |
ACTAGGATGCTTCCACCCTA+TGG | - | chr5_3:7188683-7188702 | Msa0795250:five_prime_UTR | 50.0% | |
! | AAGGAGCGTGTGTGTTGGTG+GGG | + | chr5_3:7186637-7186656 | None:intergenic | 55.0% |
GAAGAAACTACCACCGGCGA+CGG | + | chr5_3:7186721-7186740 | None:intergenic | 55.0% | |
!! | GTTGATGGCGACATTACCGG+TGG | - | chr5_3:7187020-7187039 | Msa0795250:three_prime_UTR | 55.0% |
GCAAACAGGTGAATCGGCGA+CGG | - | chr5_3:7187044-7187063 | Msa0795250:three_prime_UTR | 55.0% | |
GGAAAGTTGTACCTGACCGG+TGG | - | chr5_3:7187378-7187397 | Msa0795250:CDS | 55.0% | |
AGGAACAGCTATGGCGACAG+CGG | - | chr5_3:7187481-7187500 | Msa0795250:CDS | 55.0% | |
AACAGTAGCTATGGCGGCAC+CGG | - | chr5_3:7187523-7187542 | Msa0795250:CDS | 55.0% | |
!! | TATGGCGGCACCGGTTAGAA+TGG | - | chr5_3:7187532-7187551 | Msa0795250:CDS | 55.0% |
TTCAACTAACTCCGGCGCAG+TGG | + | chr5_3:7187657-7187676 | None:intergenic | 55.0% | |
GGGGCGTGGTTGTAACAGAA+GGG | - | chr5_3:7187828-7187847 | Msa0795250:CDS | 55.0% | |
CTTAATGTGGGTGGAGCTGC+TGG | - | chr5_3:7187908-7187927 | Msa0795250:CDS | 55.0% | |
ACATGAGGAGCCTCAACCTC+TGG | + | chr5_3:7187968-7187987 | None:intergenic | 55.0% | |
TGAGGTTGAACCGGAGAGAG+AGG | - | chr5_3:7188039-7188058 | Msa0795250:intron | 55.0% | |
TGAACCGGAGAGAGAGGAAC+GGG | - | chr5_3:7188045-7188064 | Msa0795250:intron | 55.0% | |
TGTTCCCGTTCCTCTCTCTC+CGG | + | chr5_3:7188052-7188071 | None:intergenic | 55.0% | |
GCAGGAGACTGATCGAGGAT+CGG | - | chr5_3:7188117-7188136 | Msa0795250:intron | 55.0% | |
CCATCACCATCACCATCACG+AGG | + | chr5_3:7188157-7188176 | None:intergenic | 55.0% | |
!! | CCTCGTGATGGTGATGGTGA+TGG | - | chr5_3:7188154-7188173 | Msa0795250:CDS | 55.0% |
!! | CGGATGATCAAGAGCGTCGT+TGG | - | chr5_3:7188182-7188201 | Msa0795250:CDS | 55.0% |
! | AAGGAGCGTGTGTGTTGGTG+GGG | + | chr5_3:7186637-7186656 | None:intergenic | 55.0% |
GAAGAAACTACCACCGGCGA+CGG | + | chr5_3:7186721-7186740 | None:intergenic | 55.0% | |
!! | GTTGATGGCGACATTACCGG+TGG | - | chr5_3:7187020-7187039 | Msa0795250:three_prime_UTR | 55.0% |
GCAAACAGGTGAATCGGCGA+CGG | - | chr5_3:7187044-7187063 | Msa0795250:three_prime_UTR | 55.0% | |
GGAAAGTTGTACCTGACCGG+TGG | - | chr5_3:7187378-7187397 | Msa0795250:CDS | 55.0% | |
AGGAACAGCTATGGCGACAG+CGG | - | chr5_3:7187481-7187500 | Msa0795250:CDS | 55.0% | |
AACAGTAGCTATGGCGGCAC+CGG | - | chr5_3:7187523-7187542 | Msa0795250:CDS | 55.0% | |
!! | TATGGCGGCACCGGTTAGAA+TGG | - | chr5_3:7187532-7187551 | Msa0795250:CDS | 55.0% |
TTCAACTAACTCCGGCGCAG+TGG | + | chr5_3:7187657-7187676 | None:intergenic | 55.0% | |
GGGGCGTGGTTGTAACAGAA+GGG | - | chr5_3:7187828-7187847 | Msa0795250:CDS | 55.0% | |
CTTAATGTGGGTGGAGCTGC+TGG | - | chr5_3:7187908-7187927 | Msa0795250:CDS | 55.0% | |
ACATGAGGAGCCTCAACCTC+TGG | + | chr5_3:7187968-7187987 | None:intergenic | 55.0% | |
TGAGGTTGAACCGGAGAGAG+AGG | - | chr5_3:7188039-7188058 | Msa0795250:intron | 55.0% | |
TGAACCGGAGAGAGAGGAAC+GGG | - | chr5_3:7188045-7188064 | Msa0795250:intron | 55.0% | |
TGTTCCCGTTCCTCTCTCTC+CGG | + | chr5_3:7188052-7188071 | None:intergenic | 55.0% | |
GCAGGAGACTGATCGAGGAT+CGG | - | chr5_3:7188117-7188136 | Msa0795250:intron | 55.0% | |
CCATCACCATCACCATCACG+AGG | + | chr5_3:7188157-7188176 | None:intergenic | 55.0% | |
!! | CCTCGTGATGGTGATGGTGA+TGG | - | chr5_3:7188154-7188173 | Msa0795250:CDS | 55.0% |
!! | CGGATGATCAAGAGCGTCGT+TGG | - | chr5_3:7188182-7188201 | Msa0795250:CDS | 55.0% |
AACAGGTGAATCGGCGACGG+CGG | - | chr5_3:7187047-7187066 | Msa0795250:three_prime_UTR | 60.0% | |
GCCATAGCTGTTCCTGCTGC+CGG | + | chr5_3:7187476-7187495 | None:intergenic | 60.0% | |
CATGAGTTGCACCACTGCGC+CGG | - | chr5_3:7187643-7187662 | Msa0795250:CDS | 60.0% | |
CGGGGCGTGGTTGTAACAGA+AGG | - | chr5_3:7187827-7187846 | Msa0795250:CDS | 60.0% | |
AATGTGGGTGGAGCTGCTGG+CGG | - | chr5_3:7187911-7187930 | Msa0795250:CDS | 60.0% | |
TCCTCGCAGGAGACTGATCG+AGG | - | chr5_3:7188112-7188131 | Msa0795250:intron | 60.0% | |
TCCTCGATCAGTCTCCTGCG+AGG | + | chr5_3:7188116-7188135 | None:intergenic | 60.0% | |
AACAGGTGAATCGGCGACGG+CGG | - | chr5_3:7187047-7187066 | Msa0795250:three_prime_UTR | 60.0% | |
GCCATAGCTGTTCCTGCTGC+CGG | + | chr5_3:7187476-7187495 | None:intergenic | 60.0% | |
CATGAGTTGCACCACTGCGC+CGG | - | chr5_3:7187643-7187662 | Msa0795250:CDS | 60.0% | |
CGGGGCGTGGTTGTAACAGA+AGG | - | chr5_3:7187827-7187846 | Msa0795250:CDS | 60.0% | |
AATGTGGGTGGAGCTGCTGG+CGG | - | chr5_3:7187911-7187930 | Msa0795250:CDS | 60.0% | |
TCCTCGCAGGAGACTGATCG+AGG | - | chr5_3:7188112-7188131 | Msa0795250:intron | 60.0% | |
TCCTCGATCAGTCTCCTGCG+AGG | + | chr5_3:7188116-7188135 | None:intergenic | 60.0% | |
CGCTAACCTAACGCCGTCGC+CGG | - | chr5_3:7186705-7186724 | Msa0795250:three_prime_UTR | 65.0% | |
TAACCTAACGCCGTCGCCGG+TGG | - | chr5_3:7186708-7186727 | Msa0795250:three_prime_UTR | 65.0% | |
GCCGGCAGCAGGAACAGCTA+TGG | - | chr5_3:7187472-7187491 | Msa0795250:CDS | 65.0% | |
! | CTACGAGTGCTGCGACGGCA+CGG | - | chr5_3:7187807-7187826 | Msa0795250:CDS | 65.0% |
! | TACGAGTGCTGCGACGGCAC+GGG | - | chr5_3:7187808-7187827 | Msa0795250:CDS | 65.0% |
CGCTAACCTAACGCCGTCGC+CGG | - | chr5_3:7186705-7186724 | Msa0795250:three_prime_UTR | 65.0% | |
TAACCTAACGCCGTCGCCGG+TGG | - | chr5_3:7186708-7186727 | Msa0795250:three_prime_UTR | 65.0% | |
GCCGGCAGCAGGAACAGCTA+TGG | - | chr5_3:7187472-7187491 | Msa0795250:CDS | 65.0% | |
! | CTACGAGTGCTGCGACGGCA+CGG | - | chr5_3:7187807-7187826 | Msa0795250:CDS | 65.0% |
! | TACGAGTGCTGCGACGGCAC+GGG | - | chr5_3:7187808-7187827 | Msa0795250:CDS | 65.0% |
CTACCACCGGCGACGGCGTT+AGG | + | chr5_3:7186714-7186733 | None:intergenic | 70.0% | |
! | ACGAGTGCTGCGACGGCACG+GGG | - | chr5_3:7187809-7187828 | Msa0795250:CDS | 70.0% |
CTACCACCGGCGACGGCGTT+AGG | + | chr5_3:7186714-7186733 | None:intergenic | 70.0% | |
! | ACGAGTGCTGCGACGGCACG+GGG | - | chr5_3:7187809-7187828 | Msa0795250:CDS | 70.0% |
! | TGCTGCGACGGCACGGGGCG+TGG | - | chr5_3:7187814-7187833 | Msa0795250:CDS | 80.0% |
! | TGCTGCGACGGCACGGGGCG+TGG | - | chr5_3:7187814-7187833 | Msa0795250:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 7186632 | 7188760 | 7186632 | ID=Msa0795250;Name=Msa0795250 |
chr5_3 | mRNA | 7186632 | 7188760 | 7186632 | ID=Msa0795250-mRNA-1;Parent=Msa0795250;Name=Msa0795250-mRNA-1;_AED=0.06;_eAED=0.06;_QI=226|1|1|1|0.5|0.33|3|541|365 |
chr5_3 | exon | 7186632 | 7188021 | 7186632 | ID=Msa0795250-mRNA-1:exon:2943;Parent=Msa0795250-mRNA-1 |
chr5_3 | exon | 7188120 | 7188433 | 7188120 | ID=Msa0795250-mRNA-1:exon:2942;Parent=Msa0795250-mRNA-1 |
chr5_3 | exon | 7188600 | 7188760 | 7188600 | ID=Msa0795250-mRNA-1:exon:2941;Parent=Msa0795250-mRNA-1 |
chr5_3 | five_prime_UTR | 7188600 | 7188760 | 7188600 | ID=Msa0795250-mRNA-1:five_prime_utr;Parent=Msa0795250-mRNA-1 |
chr5_3 | five_prime_UTR | 7188369 | 7188433 | 7188369 | ID=Msa0795250-mRNA-1:five_prime_utr;Parent=Msa0795250-mRNA-1 |
chr5_3 | CDS | 7188120 | 7188368 | 7188120 | ID=Msa0795250-mRNA-1:cds;Parent=Msa0795250-mRNA-1 |
chr5_3 | CDS | 7187173 | 7188021 | 7187173 | ID=Msa0795250-mRNA-1:cds;Parent=Msa0795250-mRNA-1 |
chr5_3 | three_prime_UTR | 7186632 | 7187172 | 7186632 | ID=Msa0795250-mRNA-1:three_prime_utr;Parent=Msa0795250-mRNA-1 |
Gene Sequence |
Protein sequence |