AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0015390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0015390 MtrunA17_Chr1g0166241 94.460 361 13 5 1 358 1 357 0.0 654
Msa0015390 MtrunA17_Chr1g0188091 57.552 384 130 11 1 353 1 382 1.29e-131 381
Msa0015390 MtrunA17_Chr7g0260551 44.355 372 170 11 4 358 5 356 1.27e-93 283
Msa0015390 MtrunA17_Chr1g0184881 47.027 370 153 12 4 356 5 348 2.95e-89 272
Msa0015390 MtrunA17_Chr4g0075591 34.742 213 123 2 61 273 41 237 1.46e-36 134
Msa0015390 MtrunA17_Chr8g0384101 40.278 144 79 1 154 290 82 225 3.84e-36 132
Msa0015390 MtrunA17_Chr7g0251511 37.333 225 108 9 65 274 50 256 1.79e-35 132
Msa0015390 MtrunA17_Chr4g0075611 40.602 133 79 0 156 288 138 270 2.38e-34 128
Msa0015390 MtrunA17_Chr2g0289701 48.214 112 58 0 162 273 142 253 5.05e-33 125
Msa0015390 MtrunA17_Chr2g0282301 41.732 127 68 2 154 274 143 269 1.93e-32 123
Msa0015390 MtrunA17_Chr4g0040171 39.683 126 67 2 154 271 119 243 7.25e-30 115
Msa0015390 MtrunA17_Chr8g0339051 31.250 240 126 8 52 274 41 258 9.22e-30 116
Msa0015390 MtrunA17_Chr4g0047231 37.008 127 74 2 154 274 149 275 2.27e-29 115
Msa0015390 MtrunA17_Chr4g0047221 37.008 127 74 2 154 274 202 328 6.52e-29 115
Msa0015390 MtrunA17_Chr2g0282311 30.189 159 105 2 127 279 116 274 6.73e-27 108
Msa0015390 MtrunA17_Chr7g0234691 30.531 226 125 8 63 275 92 298 1.10e-26 108
Msa0015390 MtrunA17_Chr5g0396281 35.484 124 74 1 154 271 97 220 1.74e-24 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0015390 AT3G22970.1 50.130 385 143 13 4 358 5 370 6.28e-106 315
Msa0015390 AT4G14620.1 50.137 365 143 14 4 356 2 339 5.45e-96 289
Msa0015390 AT2G38820.2 44.795 317 151 8 4 308 5 309 1.42e-84 259
Msa0015390 AT3G22970.2 52.381 252 93 5 119 358 23 259 1.43e-74 231
Msa0015390 AT3G54550.1 41.577 279 136 9 5 273 6 267 3.04e-61 198
Msa0015390 AT2G38820.1 40.206 194 96 5 4 185 5 190 6.21e-35 127
Msa0015390 AT3G07350.1 33.475 236 136 6 52 274 34 261 1.53e-34 129
Msa0015390 AT3G25240.1 32.794 247 143 6 58 296 30 261 2.33e-32 122
Msa0015390 AT2G39650.2 43.089 123 64 1 158 274 52 174 1.22e-31 119
Msa0015390 AT2G39650.1 43.089 123 64 1 158 274 114 236 2.76e-31 120
Msa0015390 AT4G32480.1 40.984 122 66 2 158 273 120 241 2.94e-28 112
Msa0015390 AT1G62420.1 30.698 215 121 6 65 273 38 230 8.70e-28 110
Msa0015390 AT1G77160.2 35.294 170 87 3 151 302 22 186 1.25e-27 108
Msa0015390 AT1G77160.1 31.220 205 115 4 119 302 42 241 4.83e-27 108
Msa0015390 AT2G20670.1 40.351 114 62 1 166 273 130 243 7.40e-27 108
Msa0015390 AT1G77145.1 35.616 146 76 2 151 278 72 217 2.60e-26 105
Msa0015390 AT1G12030.1 38.938 113 68 1 162 273 118 230 7.16e-25 102
Msa0015390 AT1G77145.2 39.216 102 52 1 187 278 59 160 1.34e-20 89.0

Find 102 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGTTTGCTTGGCGAAAA+TGG 0.121680 1_1:+24886841 Msa0015390:CDS
GTCAACAATGATCTGATTTC+TGG 0.126621 1_1:+24888287 Msa0015390:three_prime_UTR
CATCCATTTGCAAATCAAAA+TGG 0.188560 1_1:+24887255 Msa0015390:CDS
TCTTTAGTGGTATTGTTCTT+AGG 0.254266 1_1:-24886782 None:intergenic
AATATTGAGAAGAAGATTAA+TGG 0.269219 1_1:+24886640 Msa0015390:exon
AGACGAGCATTGTTAATTTC+CGG 0.316405 1_1:-24886378 None:intergenic
TTCAACCTCCACTTCGAAAC+TGG 0.330861 1_1:-24886731 None:intergenic
TAAAGAGAAAATTTCGGATA+AGG 0.343195 1_1:+24887987 Msa0015390:three_prime_UTR
AAAGTTATGGTTAGAAGAAA+AGG 0.343989 1_1:-24886435 None:intergenic
GCCGCATCGGAGACTTGCTT+TGG 0.348894 1_1:-24887673 None:intergenic
CTTCTAGGCTAAGAAAGTTA+TGG 0.360468 1_1:-24886448 None:intergenic
TTCAAATTCAAATTAAACTT+TGG 0.377537 1_1:-24888221 None:intergenic
GAGTCCAGCGTGGCAGTTAC+CGG 0.378357 1_1:+24887819 Msa0015390:CDS
TCGGAGGTGGATAGTGATTC+TGG 0.383038 1_1:+24887718 Msa0015390:CDS
GATTGGATTCCTTAAGGATA+TGG 0.397537 1_1:+24888265 Msa0015390:three_prime_UTR
GTGGTATTGTTCTTAGGAAA+AGG 0.405068 1_1:-24886776 None:intergenic
TCACACATATCACACTAGTT+TGG 0.409243 1_1:-24888244 None:intergenic
ATCCATTTGCAAATCAAAAT+GGG 0.412073 1_1:+24887256 Msa0015390:CDS
TCAACAATGATCTGATTTCT+GGG 0.414981 1_1:+24888288 Msa0015390:three_prime_UTR
TTCTCTGAATCTATGTCAAT+CGG 0.419113 1_1:-24886680 None:intergenic
CATTGTTGACCATATCCTTA+AGG 0.422111 1_1:-24888274 None:intergenic
ATTCCTCTTTCACCACTCTT+CGG 0.422133 1_1:-24887850 None:intergenic
ACCACCACCACCATCTTTAG+TGG 0.439948 1_1:-24886795 None:intergenic
CTCCGATGCGGCGGCGGTAA+AGG 0.448910 1_1:+24887684 Msa0015390:CDS
GGATAGTGATTCTGGTGAAT+TGG 0.451879 1_1:+24887726 Msa0015390:CDS
CTTAACTGAGTCAGTTGAAT+CGG 0.458623 1_1:-24886996 None:intergenic
AAAGACATGACGACGGTGAT+CGG 0.464495 1_1:-24886403 None:intergenic
CGATTCAACTGACTCAGTTA+AGG 0.466446 1_1:+24886997 Msa0015390:CDS
TTCGCCAAGCAAACAGAGCT+TGG 0.466708 1_1:-24886836 None:intergenic
AAAACAAATTCTTGTCCTGC+TGG 0.468712 1_1:+24887281 Msa0015390:CDS
AATTCAAATTAAACTTTGGA+TGG 0.470357 1_1:-24888217 None:intergenic
GGAACCAAGCTCTGTTTGCT+TGG 0.476354 1_1:+24886832 Msa0015390:CDS
AGAGAAAGCCACTACGGAAC+TGG 0.478102 1_1:+24886697 Msa0015390:CDS
ATGTGTGATTGGATTCCTTA+AGG 0.481577 1_1:+24888259 Msa0015390:three_prime_UTR
TGGTGGTGGAGTTGCTGAGT+TGG 0.486575 1_1:+24886811 Msa0015390:CDS
CCACTCTTCGGTTTCACCGC+CGG 0.488504 1_1:-24887838 None:intergenic
TTCCTTTACCGCCGCCGCAT+CGG 0.488874 1_1:-24887686 None:intergenic
CGCCGGAAAATTCATATCTC+CGG 0.488913 1_1:-24886343 None:intergenic
TCCGGCGATATTTACTTCAC+CGG 0.494398 1_1:+24886359 Msa0015390:five_prime_UTR
GGAAATTGCTTCGTCGGAGG+TGG 0.494905 1_1:+24887705 Msa0015390:CDS
CGTCACCGTCGTGTCGGAGG+CGG 0.500832 1_1:+24887555 Msa0015390:CDS
AAGAACAATACCACTAAAGA+TGG 0.502600 1_1:+24886785 Msa0015390:CDS
CGAGACGGTGGTTGAAGTTG+CGG 0.502860 1_1:-24886893 None:intergenic
GAGTGGTGAAAGAGGAATGA+AGG 0.505285 1_1:+24887855 Msa0015390:CDS
GCAAGTCTCCGATGCGGCGG+CGG 0.509435 1_1:+24887678 Msa0015390:CDS
TGGATTAGCTTCTTTGCTGA+AGG 0.511501 1_1:+24887882 Msa0015390:CDS
GGAGAAAGCTTCGCCGGAGG+AGG 0.512134 1_1:+24887765 Msa0015390:CDS
TTCGCCGGAGGAGGTAGTTA+CGG 0.512281 1_1:+24887774 Msa0015390:CDS
TGCTTTGGCCTAGCTGCCGA+CGG 0.512808 1_1:-24887658 None:intergenic
AAGCAGAGTTTGAAGAAGAA+AGG 0.517627 1_1:+24887580 Msa0015390:CDS
ACCGCCGGTAACTGCCACGC+TGG 0.521213 1_1:-24887823 None:intergenic
GGATCTCTCCGTCGGCAGCT+AGG 0.526135 1_1:+24887650 Msa0015390:CDS
GAAAATGGTTCAGAGTTTCA+TGG 0.527012 1_1:+24886856 Msa0015390:CDS
ACTAGTGTGATATGTGTGAT+TGG 0.527155 1_1:+24888248 Msa0015390:three_prime_UTR
ACTAAAGATGGTGGTGGTGG+TGG 0.532828 1_1:+24886797 Msa0015390:CDS
GGTGGTTGAAGTTGCGGTTG+CGG 0.536574 1_1:-24886887 None:intergenic
GAAGATGATTTCGATTTCAA+CGG 0.543769 1_1:+24886953 Msa0015390:CDS
GCTGAAAAGCTTCAATCTCT+CGG 0.548796 1_1:+24887224 Msa0015390:CDS
CTGAATCTATGTCAATCGGT+TGG 0.551079 1_1:-24886676 None:intergenic
TCAATTCATTGATGCGATTG+TGG 0.553988 1_1:+24887399 Msa0015390:CDS
TGGTGAGGAGAAAGCTTCGC+CGG 0.554242 1_1:+24887759 Msa0015390:CDS
AAACCGAAGAGTGGTGAAAG+AGG 0.554832 1_1:+24887847 Msa0015390:CDS
GAAAGAGGAATGAAGGTGAC+TGG 0.556629 1_1:+24887862 Msa0015390:CDS
TTTCGAAGTGGAGGTTGAAG+AGG 0.556890 1_1:+24886735 Msa0015390:CDS
CGTTCTTCAACACTTACACA+AGG 0.565445 1_1:-24887119 None:intergenic
CTTGTGTAAGTGTTGAAGAA+CGG 0.570166 1_1:+24887120 Msa0015390:CDS
TCCGGTGAAGTAAATATCGC+CGG 0.580411 1_1:-24886360 None:intergenic
ATGTAATCGCGCTTCCTCCA+CGG 0.582747 1_1:-24887616 None:intergenic
TTCATTGATGCGATTGTGGA+AGG 0.586622 1_1:+24887403 Msa0015390:CDS
GGTAAAGGAAATTGCTTCGT+CGG 0.586706 1_1:+24887699 Msa0015390:CDS
GAAATCGAAATCATCTTCAT+CGG 0.589260 1_1:-24886948 None:intergenic
ACCACTAAAGATGGTGGTGG+TGG 0.595959 1_1:+24886794 Msa0015390:CDS
GCCGCCGTAACTACCTCCTC+CGG 0.598847 1_1:-24887778 None:intergenic
ATGAACCAGTTTCGAAGTGG+AGG 0.599985 1_1:+24886726 Msa0015390:CDS
GATCGTCACCGTCGTGTCGG+AGG 0.603839 1_1:+24887552 Msa0015390:CDS
ATTGCGAACCAGTTCCGTAG+TGG 0.610392 1_1:-24886705 None:intergenic
AAAGGAAATTGCTTCGTCGG+AGG 0.611694 1_1:+24887702 Msa0015390:CDS
GCAGATCGTCACCGTCGTGT+CGG 0.612036 1_1:+24887549 Msa0015390:CDS
AGATTCAGAGAAAGCCACTA+CGG 0.617727 1_1:+24886691 Msa0015390:CDS
AGCGAAGTGGATCTCTCCGT+CGG 0.622895 1_1:+24887642 Msa0015390:CDS
AAAGCAAGTCTCCGATGCGG+CGG 0.623703 1_1:+24887675 Msa0015390:CDS
GAATGCATGTTCCGCCGTGG+AGG 0.625206 1_1:+24887602 Msa0015390:CDS
GCAATGAACCAGTTTCGAAG+TGG 0.634899 1_1:+24886723 Msa0015390:CDS
AACAATACCACTAAAGATGG+TGG 0.638792 1_1:+24886788 Msa0015390:CDS
TCAATCGGTTGGATCTTCAA+CGG 0.649259 1_1:-24886665 None:intergenic
CTTCGCCGCCTCCGACACGA+CGG 0.649693 1_1:-24887560 None:intergenic
GCGATTACATGTTAGCGAAG+TGG 0.650775 1_1:+24887629 Msa0015390:CDS
CAGTTACAGCGGTTACGAGA+CGG 0.650994 1_1:-24886908 None:intergenic
TCCAGCGTGGCAGTTACCGG+CGG 0.657779 1_1:+24887822 Msa0015390:CDS
CCGGCGGTGAAACCGAAGAG+TGG 0.661349 1_1:+24887838 Msa0015390:CDS
AATACCACTAAAGATGGTGG+TGG 0.666485 1_1:+24886791 Msa0015390:CDS
AAGGAATGCATGTTCCGCCG+TGG 0.669326 1_1:+24887599 Msa0015390:CDS
GGCGGCGACAGCGACAGCGA+CGG 0.672784 1_1:+24887795 Msa0015390:CDS
GAAAATTCATATCTCCGGCG+AGG 0.678693 1_1:-24886338 None:intergenic
GCCGGAGGAGGTAGTTACGG+CGG 0.688861 1_1:+24887777 Msa0015390:CDS
TAGCGTTGAAGCAGTTACAG+CGG 0.707056 1_1:-24886919 None:intergenic
TGAGGAGAAAGCTTCGCCGG+AGG 0.709522 1_1:+24887762 Msa0015390:CDS
GCCAAAGCAAGTCTCCGATG+CGG 0.718766 1_1:+24887672 Msa0015390:CDS
TTACAGCGGTTACGAGACGG+TGG 0.731805 1_1:-24886905 None:intergenic
CAGCGACGGTGAGTCCAGCG+TGG 0.734694 1_1:+24887809 Msa0015390:CDS
TTTCGTGAAAGACATGACGA+CGG 0.761807 1_1:-24886410 None:intergenic
TAATCGCGCTTCCTCCACGG+CGG 0.770748 1_1:-24887613 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGTTTTTTATTTTGATTT+TGG + chr1_1:24887071-24887090 Msa0015390:intron 10.0%
!! AAAAATTAAAGAGAAAATTT+CGG + chr1_1:24887981-24888000 Msa0015390:three_prime_UTR 10.0%
!!! ATAGTTTTTTATTTTGATTT+TGG + chr1_1:24887071-24887090 Msa0015390:intron 10.0%
!! AAAAATTAAAGAGAAAATTT+CGG + chr1_1:24887981-24888000 Msa0015390:three_prime_UTR 10.0%
!!! AAAGTTTTTTTTTTATGTGT+TGG - chr1_1:24886296-24886315 None:intergenic 15.0%
!!! TTGAACAAAATTTTATTCTA+TGG - chr1_1:24887913-24887932 None:intergenic 15.0%
!! TTCAAATTCAAATTAAACTT+TGG - chr1_1:24888224-24888243 None:intergenic 15.0%
!!! AAAGTTTTTTTTTTATGTGT+TGG - chr1_1:24886296-24886315 None:intergenic 15.0%
!!! TTGAACAAAATTTTATTCTA+TGG - chr1_1:24887913-24887932 None:intergenic 15.0%
!! TTCAAATTCAAATTAAACTT+TGG - chr1_1:24888224-24888243 None:intergenic 15.0%
!!! TAATTTTTTTCTTCTCTTCT+AGG - chr1_1:24886466-24886485 None:intergenic 20.0%
!! AATATTGAGAAGAAGATTAA+TGG + chr1_1:24886640-24886659 Msa0015390:exon 20.0%
!!! CTCAATTTTGAAATCAATTA+AGG - chr1_1:24887329-24887348 None:intergenic 20.0%
!!! TTCTTTTTTTCCTTTTCTTT+TGG + chr1_1:24888104-24888123 Msa0015390:three_prime_UTR 20.0%
!! AATTCAAATTAAACTTTGGA+TGG - chr1_1:24888220-24888239 None:intergenic 20.0%
!!! TAATTTTTTTCTTCTCTTCT+AGG - chr1_1:24886466-24886485 None:intergenic 20.0%
!! AATATTGAGAAGAAGATTAA+TGG + chr1_1:24886640-24886659 Msa0015390:exon 20.0%
!!! CTCAATTTTGAAATCAATTA+AGG - chr1_1:24887329-24887348 None:intergenic 20.0%
!!! TTCTTTTTTTCCTTTTCTTT+TGG + chr1_1:24888104-24888123 Msa0015390:three_prime_UTR 20.0%
!! AATTCAAATTAAACTTTGGA+TGG - chr1_1:24888220-24888239 None:intergenic 20.0%
! AAAGTTATGGTTAGAAGAAA+AGG - chr1_1:24886438-24886457 None:intergenic 25.0%
! ATCCATTTGCAAATCAAAAT+GGG + chr1_1:24887256-24887275 Msa0015390:CDS 25.0%
!!! ATCGTTTTTTGTTTTGTTTC+AGG + chr1_1:24887370-24887389 Msa0015390:intron 25.0%
! TAAAGAGAAAATTTCGGATA+AGG + chr1_1:24887987-24888006 Msa0015390:three_prime_UTR 25.0%
!!! TCCTTGTTTTTTTGTTTACA+AGG + chr1_1:24888051-24888070 Msa0015390:three_prime_UTR 25.0%
! TCCTTGTAAACAAAAAAACA+AGG - chr1_1:24888055-24888074 None:intergenic 25.0%
! AAAGTTATGGTTAGAAGAAA+AGG - chr1_1:24886438-24886457 None:intergenic 25.0%
! ATCCATTTGCAAATCAAAAT+GGG + chr1_1:24887256-24887275 Msa0015390:CDS 25.0%
!!! ATCGTTTTTTGTTTTGTTTC+AGG + chr1_1:24887370-24887389 Msa0015390:intron 25.0%
! TAAAGAGAAAATTTCGGATA+AGG + chr1_1:24887987-24888006 Msa0015390:three_prime_UTR 25.0%
!!! TCCTTGTTTTTTTGTTTACA+AGG + chr1_1:24888051-24888070 Msa0015390:three_prime_UTR 25.0%
! TCCTTGTAAACAAAAAAACA+AGG - chr1_1:24888055-24888074 None:intergenic 25.0%
TTCTCTGAATCTATGTCAAT+CGG - chr1_1:24886683-24886702 None:intergenic 30.0%
TCTTTAGTGGTATTGTTCTT+AGG - chr1_1:24886785-24886804 None:intergenic 30.0%
AAGAACAATACCACTAAAGA+TGG + chr1_1:24886785-24886804 Msa0015390:CDS 30.0%
GAAATCGAAATCATCTTCAT+CGG - chr1_1:24886951-24886970 None:intergenic 30.0%
GAAGATGATTTCGATTTCAA+CGG + chr1_1:24886953-24886972 Msa0015390:CDS 30.0%
CATCCATTTGCAAATCAAAA+TGG + chr1_1:24887255-24887274 Msa0015390:CDS 30.0%
AAGTTGAATTAATTACCAGC+AGG - chr1_1:24887299-24887318 None:intergenic 30.0%
! TTTTTCCCGACGAAAATATA+CGG - chr1_1:24887517-24887536 None:intergenic 30.0%
!!! CTTTTTTCTTCTTTTGATCG+TGG + chr1_1:24887944-24887963 Msa0015390:three_prime_UTR 30.0%
!!! TTCCTTTTCTTTTGGCTTTT+TGG + chr1_1:24888112-24888131 Msa0015390:three_prime_UTR 30.0%
TCAACAATGATCTGATTTCT+GGG + chr1_1:24888288-24888307 Msa0015390:three_prime_UTR 30.0%
TTCTCTGAATCTATGTCAAT+CGG - chr1_1:24886683-24886702 None:intergenic 30.0%
TCTTTAGTGGTATTGTTCTT+AGG - chr1_1:24886785-24886804 None:intergenic 30.0%
AAGAACAATACCACTAAAGA+TGG + chr1_1:24886785-24886804 Msa0015390:CDS 30.0%
GAAATCGAAATCATCTTCAT+CGG - chr1_1:24886951-24886970 None:intergenic 30.0%
GAAGATGATTTCGATTTCAA+CGG + chr1_1:24886953-24886972 Msa0015390:CDS 30.0%
CATCCATTTGCAAATCAAAA+TGG + chr1_1:24887255-24887274 Msa0015390:CDS 30.0%
AAGTTGAATTAATTACCAGC+AGG - chr1_1:24887299-24887318 None:intergenic 30.0%
! TTTTTCCCGACGAAAATATA+CGG - chr1_1:24887517-24887536 None:intergenic 30.0%
!!! CTTTTTTCTTCTTTTGATCG+TGG + chr1_1:24887944-24887963 Msa0015390:three_prime_UTR 30.0%
!!! TTCCTTTTCTTTTGGCTTTT+TGG + chr1_1:24888112-24888131 Msa0015390:three_prime_UTR 30.0%
TCAACAATGATCTGATTTCT+GGG + chr1_1:24888288-24888307 Msa0015390:three_prime_UTR 30.0%
AAGAAATCAAAAAACCTCGC+CGG + chr1_1:24886324-24886343 Msa0015390:five_prime_UTR 35.0%
! AGACGAGCATTGTTAATTTC+CGG - chr1_1:24886381-24886400 None:intergenic 35.0%
CTTCTAGGCTAAGAAAGTTA+TGG - chr1_1:24886451-24886470 None:intergenic 35.0%
GTGGTATTGTTCTTAGGAAA+AGG - chr1_1:24886779-24886798 None:intergenic 35.0%
AACAATACCACTAAAGATGG+TGG + chr1_1:24886788-24886807 Msa0015390:CDS 35.0%
GAAAATGGTTCAGAGTTTCA+TGG + chr1_1:24886856-24886875 Msa0015390:CDS 35.0%
CTTAACTGAGTCAGTTGAAT+CGG - chr1_1:24886999-24887018 None:intergenic 35.0%
!! CTTGTGTAAGTGTTGAAGAA+CGG + chr1_1:24887120-24887139 Msa0015390:CDS 35.0%
!!! CTCCCATTTTGATTTGCAAA+TGG - chr1_1:24887261-24887280 None:intergenic 35.0%
AAAACAAATTCTTGTCCTGC+TGG + chr1_1:24887281-24887300 Msa0015390:CDS 35.0%
TCAATTCATTGATGCGATTG+TGG + chr1_1:24887399-24887418 Msa0015390:CDS 35.0%
! TCACTTCCGTATATTTTCGT+CGG + chr1_1:24887508-24887527 Msa0015390:CDS 35.0%
! GTATATTTTCGTCGGGAAAA+AGG + chr1_1:24887516-24887535 Msa0015390:CDS 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG + chr1_1:24887580-24887599 Msa0015390:CDS 35.0%
TGCCAAAAAGCCAAAAGAAA+AGG - chr1_1:24888117-24888136 None:intergenic 35.0%
!! CTTTTTGGCACAATGTAAGA+AGG + chr1_1:24888127-24888146 Msa0015390:three_prime_UTR 35.0%
TCACACATATCACACTAGTT+TGG - chr1_1:24888247-24888266 None:intergenic 35.0%
ACTAGTGTGATATGTGTGAT+TGG + chr1_1:24888248-24888267 Msa0015390:three_prime_UTR 35.0%
ATGTGTGATTGGATTCCTTA+AGG + chr1_1:24888259-24888278 Msa0015390:three_prime_UTR 35.0%
GATTGGATTCCTTAAGGATA+TGG + chr1_1:24888265-24888284 Msa0015390:three_prime_UTR 35.0%
CATTGTTGACCATATCCTTA+AGG - chr1_1:24888277-24888296 None:intergenic 35.0%
GTCAACAATGATCTGATTTC+TGG + chr1_1:24888287-24888306 Msa0015390:three_prime_UTR 35.0%
AAGAAATCAAAAAACCTCGC+CGG + chr1_1:24886324-24886343 Msa0015390:five_prime_UTR 35.0%
! AGACGAGCATTGTTAATTTC+CGG - chr1_1:24886381-24886400 None:intergenic 35.0%
CTTCTAGGCTAAGAAAGTTA+TGG - chr1_1:24886451-24886470 None:intergenic 35.0%
GTGGTATTGTTCTTAGGAAA+AGG - chr1_1:24886779-24886798 None:intergenic 35.0%
AACAATACCACTAAAGATGG+TGG + chr1_1:24886788-24886807 Msa0015390:CDS 35.0%
GAAAATGGTTCAGAGTTTCA+TGG + chr1_1:24886856-24886875 Msa0015390:CDS 35.0%
CTTAACTGAGTCAGTTGAAT+CGG - chr1_1:24886999-24887018 None:intergenic 35.0%
!! CTTGTGTAAGTGTTGAAGAA+CGG + chr1_1:24887120-24887139 Msa0015390:CDS 35.0%
!!! CTCCCATTTTGATTTGCAAA+TGG - chr1_1:24887261-24887280 None:intergenic 35.0%
AAAACAAATTCTTGTCCTGC+TGG + chr1_1:24887281-24887300 Msa0015390:CDS 35.0%
TCAATTCATTGATGCGATTG+TGG + chr1_1:24887399-24887418 Msa0015390:CDS 35.0%
! TCACTTCCGTATATTTTCGT+CGG + chr1_1:24887508-24887527 Msa0015390:CDS 35.0%
! GTATATTTTCGTCGGGAAAA+AGG + chr1_1:24887516-24887535 Msa0015390:CDS 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG + chr1_1:24887580-24887599 Msa0015390:CDS 35.0%
TGCCAAAAAGCCAAAAGAAA+AGG - chr1_1:24888117-24888136 None:intergenic 35.0%
!! CTTTTTGGCACAATGTAAGA+AGG + chr1_1:24888127-24888146 Msa0015390:three_prime_UTR 35.0%
TCACACATATCACACTAGTT+TGG - chr1_1:24888247-24888266 None:intergenic 35.0%
ACTAGTGTGATATGTGTGAT+TGG + chr1_1:24888248-24888267 Msa0015390:three_prime_UTR 35.0%
ATGTGTGATTGGATTCCTTA+AGG + chr1_1:24888259-24888278 Msa0015390:three_prime_UTR 35.0%
GATTGGATTCCTTAAGGATA+TGG + chr1_1:24888265-24888284 Msa0015390:three_prime_UTR 35.0%
CATTGTTGACCATATCCTTA+AGG - chr1_1:24888277-24888296 None:intergenic 35.0%
GTCAACAATGATCTGATTTC+TGG + chr1_1:24888287-24888306 Msa0015390:three_prime_UTR 35.0%
TTTCGTGAAAGACATGACGA+CGG - chr1_1:24886413-24886432 None:intergenic 40.0%
TCAATCGGTTGGATCTTCAA+CGG - chr1_1:24886668-24886687 None:intergenic 40.0%
CTGAATCTATGTCAATCGGT+TGG - chr1_1:24886679-24886698 None:intergenic 40.0%
AGATTCAGAGAAAGCCACTA+CGG + chr1_1:24886691-24886710 Msa0015390:CDS 40.0%
! AATACCACTAAAGATGGTGG+TGG + chr1_1:24886791-24886810 Msa0015390:CDS 40.0%
! CGATTCAACTGACTCAGTTA+AGG + chr1_1:24886997-24887016 Msa0015390:CDS 40.0%
CGTTCTTCAACACTTACACA+AGG - chr1_1:24887122-24887141 None:intergenic 40.0%
GCTGAAAAGCTTCAATCTCT+CGG + chr1_1:24887224-24887243 Msa0015390:CDS 40.0%
TTCATTGATGCGATTGTGGA+AGG + chr1_1:24887403-24887422 Msa0015390:CDS 40.0%
! CACTTCCGTATATTTTCGTC+GGG + chr1_1:24887509-24887528 Msa0015390:CDS 40.0%
GGTAAAGGAAATTGCTTCGT+CGG + chr1_1:24887699-24887718 Msa0015390:CDS 40.0%
GGATAGTGATTCTGGTGAAT+TGG + chr1_1:24887726-24887745 Msa0015390:CDS 40.0%
!! GGTGAATTGGAGCTGATTTT+TGG + chr1_1:24887739-24887758 Msa0015390:CDS 40.0%
!!! ATTGGAGCTGATTTTTGGTG+AGG + chr1_1:24887744-24887763 Msa0015390:CDS 40.0%
ATTCCTCTTTCACCACTCTT+CGG - chr1_1:24887853-24887872 None:intergenic 40.0%
!! TGGATTAGCTTCTTTGCTGA+AGG + chr1_1:24887882-24887901 Msa0015390:CDS 40.0%
TTTCGTGAAAGACATGACGA+CGG - chr1_1:24886413-24886432 None:intergenic 40.0%
TCAATCGGTTGGATCTTCAA+CGG - chr1_1:24886668-24886687 None:intergenic 40.0%
CTGAATCTATGTCAATCGGT+TGG - chr1_1:24886679-24886698 None:intergenic 40.0%
AGATTCAGAGAAAGCCACTA+CGG + chr1_1:24886691-24886710 Msa0015390:CDS 40.0%
! AATACCACTAAAGATGGTGG+TGG + chr1_1:24886791-24886810 Msa0015390:CDS 40.0%
! CGATTCAACTGACTCAGTTA+AGG + chr1_1:24886997-24887016 Msa0015390:CDS 40.0%
CGTTCTTCAACACTTACACA+AGG - chr1_1:24887122-24887141 None:intergenic 40.0%
GCTGAAAAGCTTCAATCTCT+CGG + chr1_1:24887224-24887243 Msa0015390:CDS 40.0%
TTCATTGATGCGATTGTGGA+AGG + chr1_1:24887403-24887422 Msa0015390:CDS 40.0%
! CACTTCCGTATATTTTCGTC+GGG + chr1_1:24887509-24887528 Msa0015390:CDS 40.0%
GGTAAAGGAAATTGCTTCGT+CGG + chr1_1:24887699-24887718 Msa0015390:CDS 40.0%
GGATAGTGATTCTGGTGAAT+TGG + chr1_1:24887726-24887745 Msa0015390:CDS 40.0%
!! GGTGAATTGGAGCTGATTTT+TGG + chr1_1:24887739-24887758 Msa0015390:CDS 40.0%
!!! ATTGGAGCTGATTTTTGGTG+AGG + chr1_1:24887744-24887763 Msa0015390:CDS 40.0%
ATTCCTCTTTCACCACTCTT+CGG - chr1_1:24887853-24887872 None:intergenic 40.0%
!! TGGATTAGCTTCTTTGCTGA+AGG + chr1_1:24887882-24887901 Msa0015390:CDS 40.0%
GAAAATTCATATCTCCGGCG+AGG - chr1_1:24886341-24886360 None:intergenic 45.0%
! CGCCGGAGATATGAATTTTC+CGG + chr1_1:24886341-24886360 Msa0015390:five_prime_UTR 45.0%
CGCCGGAAAATTCATATCTC+CGG - chr1_1:24886346-24886365 None:intergenic 45.0%
TCCGGCGATATTTACTTCAC+CGG + chr1_1:24886359-24886378 Msa0015390:five_prime_UTR 45.0%
TCCGGTGAAGTAAATATCGC+CGG - chr1_1:24886363-24886382 None:intergenic 45.0%
AAAGACATGACGACGGTGAT+CGG - chr1_1:24886406-24886425 None:intergenic 45.0%
GCAATGAACCAGTTTCGAAG+TGG + chr1_1:24886723-24886742 Msa0015390:CDS 45.0%
ATGAACCAGTTTCGAAGTGG+AGG + chr1_1:24886726-24886745 Msa0015390:CDS 45.0%
TTCAACCTCCACTTCGAAAC+TGG - chr1_1:24886734-24886753 None:intergenic 45.0%
TTTCGAAGTGGAGGTTGAAG+AGG + chr1_1:24886735-24886754 Msa0015390:CDS 45.0%
CTCTGTTTGCTTGGCGAAAA+TGG + chr1_1:24886841-24886860 Msa0015390:CDS 45.0%
! TAGCGTTGAAGCAGTTACAG+CGG - chr1_1:24886922-24886941 None:intergenic 45.0%
! TTTTCGTCGGGAAAAAGGAG+CGG + chr1_1:24887521-24887540 Msa0015390:CDS 45.0%
GCGATTACATGTTAGCGAAG+TGG + chr1_1:24887629-24887648 Msa0015390:CDS 45.0%
AAAGGAAATTGCTTCGTCGG+AGG + chr1_1:24887702-24887721 Msa0015390:CDS 45.0%
AAACCGAAGAGTGGTGAAAG+AGG + chr1_1:24887847-24887866 Msa0015390:CDS 45.0%
GAGTGGTGAAAGAGGAATGA+AGG + chr1_1:24887855-24887874 Msa0015390:CDS 45.0%
GAAAGAGGAATGAAGGTGAC+TGG + chr1_1:24887862-24887881 Msa0015390:CDS 45.0%
GAAAATTCATATCTCCGGCG+AGG - chr1_1:24886341-24886360 None:intergenic 45.0%
! CGCCGGAGATATGAATTTTC+CGG + chr1_1:24886341-24886360 Msa0015390:five_prime_UTR 45.0%
CGCCGGAAAATTCATATCTC+CGG - chr1_1:24886346-24886365 None:intergenic 45.0%
TCCGGCGATATTTACTTCAC+CGG + chr1_1:24886359-24886378 Msa0015390:five_prime_UTR 45.0%
TCCGGTGAAGTAAATATCGC+CGG - chr1_1:24886363-24886382 None:intergenic 45.0%
AAAGACATGACGACGGTGAT+CGG - chr1_1:24886406-24886425 None:intergenic 45.0%
GCAATGAACCAGTTTCGAAG+TGG + chr1_1:24886723-24886742 Msa0015390:CDS 45.0%
ATGAACCAGTTTCGAAGTGG+AGG + chr1_1:24886726-24886745 Msa0015390:CDS 45.0%
TTCAACCTCCACTTCGAAAC+TGG - chr1_1:24886734-24886753 None:intergenic 45.0%
TTTCGAAGTGGAGGTTGAAG+AGG + chr1_1:24886735-24886754 Msa0015390:CDS 45.0%
CTCTGTTTGCTTGGCGAAAA+TGG + chr1_1:24886841-24886860 Msa0015390:CDS 45.0%
! TAGCGTTGAAGCAGTTACAG+CGG - chr1_1:24886922-24886941 None:intergenic 45.0%
! TTTTCGTCGGGAAAAAGGAG+CGG + chr1_1:24887521-24887540 Msa0015390:CDS 45.0%
GCGATTACATGTTAGCGAAG+TGG + chr1_1:24887629-24887648 Msa0015390:CDS 45.0%
AAAGGAAATTGCTTCGTCGG+AGG + chr1_1:24887702-24887721 Msa0015390:CDS 45.0%
AAACCGAAGAGTGGTGAAAG+AGG + chr1_1:24887847-24887866 Msa0015390:CDS 45.0%
GAGTGGTGAAAGAGGAATGA+AGG + chr1_1:24887855-24887874 Msa0015390:CDS 45.0%
GAAAGAGGAATGAAGGTGAC+TGG + chr1_1:24887862-24887881 Msa0015390:CDS 45.0%
!!! TTTTATTTTTGAAATATTTT+TGG + chr1_1:24888020-24888039 Msa0015390:three_prime_UTR 5.0%
!!! TTTTATTTTTGAAATATTTT+TGG + chr1_1:24888020-24888039 Msa0015390:three_prime_UTR 5.0%
AGAGAAAGCCACTACGGAAC+TGG + chr1_1:24886697-24886716 Msa0015390:CDS 50.0%
ATTGCGAACCAGTTCCGTAG+TGG - chr1_1:24886708-24886727 None:intergenic 50.0%
!! ACCACTAAAGATGGTGGTGG+TGG + chr1_1:24886794-24886813 Msa0015390:CDS 50.0%
ACCACCACCACCATCTTTAG+TGG - chr1_1:24886798-24886817 None:intergenic 50.0%
!! ACTAAAGATGGTGGTGGTGG+TGG + chr1_1:24886797-24886816 Msa0015390:CDS 50.0%
GGAACCAAGCTCTGTTTGCT+TGG + chr1_1:24886832-24886851 Msa0015390:CDS 50.0%
TTCGCCAAGCAAACAGAGCT+TGG - chr1_1:24886839-24886858 None:intergenic 50.0%
CAGTTACAGCGGTTACGAGA+CGG - chr1_1:24886911-24886930 None:intergenic 50.0%
ATGTAATCGCGCTTCCTCCA+CGG - chr1_1:24887619-24887638 None:intergenic 50.0%
TCGGAGGTGGATAGTGATTC+TGG + chr1_1:24887718-24887737 Msa0015390:CDS 50.0%
AGAGAAAGCCACTACGGAAC+TGG + chr1_1:24886697-24886716 Msa0015390:CDS 50.0%
ATTGCGAACCAGTTCCGTAG+TGG - chr1_1:24886708-24886727 None:intergenic 50.0%
!! ACCACTAAAGATGGTGGTGG+TGG + chr1_1:24886794-24886813 Msa0015390:CDS 50.0%
ACCACCACCACCATCTTTAG+TGG - chr1_1:24886798-24886817 None:intergenic 50.0%
!! ACTAAAGATGGTGGTGGTGG+TGG + chr1_1:24886797-24886816 Msa0015390:CDS 50.0%
GGAACCAAGCTCTGTTTGCT+TGG + chr1_1:24886832-24886851 Msa0015390:CDS 50.0%
TTCGCCAAGCAAACAGAGCT+TGG - chr1_1:24886839-24886858 None:intergenic 50.0%
CAGTTACAGCGGTTACGAGA+CGG - chr1_1:24886911-24886930 None:intergenic 50.0%
ATGTAATCGCGCTTCCTCCA+CGG - chr1_1:24887619-24887638 None:intergenic 50.0%
TCGGAGGTGGATAGTGATTC+TGG + chr1_1:24887718-24887737 Msa0015390:CDS 50.0%
!! TGGTGGTGGAGTTGCTGAGT+TGG + chr1_1:24886811-24886830 Msa0015390:CDS 55.0%
GGTGGTTGAAGTTGCGGTTG+CGG - chr1_1:24886890-24886909 None:intergenic 55.0%
CGAGACGGTGGTTGAAGTTG+CGG - chr1_1:24886896-24886915 None:intergenic 55.0%
TTACAGCGGTTACGAGACGG+TGG - chr1_1:24886908-24886927 None:intergenic 55.0%
AAGGAATGCATGTTCCGCCG+TGG + chr1_1:24887599-24887618 Msa0015390:CDS 55.0%
AGCGAAGTGGATCTCTCCGT+CGG + chr1_1:24887642-24887661 Msa0015390:CDS 55.0%
GCCAAAGCAAGTCTCCGATG+CGG + chr1_1:24887672-24887691 Msa0015390:CDS 55.0%
AAAGCAAGTCTCCGATGCGG+CGG + chr1_1:24887675-24887694 Msa0015390:CDS 55.0%
GGAAATTGCTTCGTCGGAGG+TGG + chr1_1:24887705-24887724 Msa0015390:CDS 55.0%
TGGTGAGGAGAAAGCTTCGC+CGG + chr1_1:24887759-24887778 Msa0015390:CDS 55.0%
TTCGCCGGAGGAGGTAGTTA+CGG + chr1_1:24887774-24887793 Msa0015390:CDS 55.0%
!! TGGTGGTGGAGTTGCTGAGT+TGG + chr1_1:24886811-24886830 Msa0015390:CDS 55.0%
GGTGGTTGAAGTTGCGGTTG+CGG - chr1_1:24886890-24886909 None:intergenic 55.0%
CGAGACGGTGGTTGAAGTTG+CGG - chr1_1:24886896-24886915 None:intergenic 55.0%
TTACAGCGGTTACGAGACGG+TGG - chr1_1:24886908-24886927 None:intergenic 55.0%
AAGGAATGCATGTTCCGCCG+TGG + chr1_1:24887599-24887618 Msa0015390:CDS 55.0%
AGCGAAGTGGATCTCTCCGT+CGG + chr1_1:24887642-24887661 Msa0015390:CDS 55.0%
GCCAAAGCAAGTCTCCGATG+CGG + chr1_1:24887672-24887691 Msa0015390:CDS 55.0%
AAAGCAAGTCTCCGATGCGG+CGG + chr1_1:24887675-24887694 Msa0015390:CDS 55.0%
GGAAATTGCTTCGTCGGAGG+TGG + chr1_1:24887705-24887724 Msa0015390:CDS 55.0%
TGGTGAGGAGAAAGCTTCGC+CGG + chr1_1:24887759-24887778 Msa0015390:CDS 55.0%
TTCGCCGGAGGAGGTAGTTA+CGG + chr1_1:24887774-24887793 Msa0015390:CDS 55.0%
GCAGATCGTCACCGTCGTGT+CGG + chr1_1:24887549-24887568 Msa0015390:CDS 60.0%
GAATGCATGTTCCGCCGTGG+AGG + chr1_1:24887602-24887621 Msa0015390:CDS 60.0%
TAATCGCGCTTCCTCCACGG+CGG - chr1_1:24887616-24887635 None:intergenic 60.0%
TGCTTTGGCCTAGCTGCCGA+CGG - chr1_1:24887661-24887680 None:intergenic 60.0%
! GCCGCATCGGAGACTTGCTT+TGG - chr1_1:24887676-24887695 None:intergenic 60.0%
TTCCTTTACCGCCGCCGCAT+CGG - chr1_1:24887689-24887708 None:intergenic 60.0%
TGAGGAGAAAGCTTCGCCGG+AGG + chr1_1:24887762-24887781 Msa0015390:CDS 60.0%
GAGTCCAGCGTGGCAGTTAC+CGG + chr1_1:24887819-24887838 Msa0015390:CDS 60.0%
CCACTCTTCGGTTTCACCGC+CGG - chr1_1:24887841-24887860 None:intergenic 60.0%
GCAGATCGTCACCGTCGTGT+CGG + chr1_1:24887549-24887568 Msa0015390:CDS 60.0%
GAATGCATGTTCCGCCGTGG+AGG + chr1_1:24887602-24887621 Msa0015390:CDS 60.0%
TAATCGCGCTTCCTCCACGG+CGG - chr1_1:24887616-24887635 None:intergenic 60.0%
TGCTTTGGCCTAGCTGCCGA+CGG - chr1_1:24887661-24887680 None:intergenic 60.0%
! GCCGCATCGGAGACTTGCTT+TGG - chr1_1:24887676-24887695 None:intergenic 60.0%
TTCCTTTACCGCCGCCGCAT+CGG - chr1_1:24887689-24887708 None:intergenic 60.0%
TGAGGAGAAAGCTTCGCCGG+AGG + chr1_1:24887762-24887781 Msa0015390:CDS 60.0%
GAGTCCAGCGTGGCAGTTAC+CGG + chr1_1:24887819-24887838 Msa0015390:CDS 60.0%
CCACTCTTCGGTTTCACCGC+CGG - chr1_1:24887841-24887860 None:intergenic 60.0%
GATCGTCACCGTCGTGTCGG+AGG + chr1_1:24887552-24887571 Msa0015390:CDS 65.0%
GGATCTCTCCGTCGGCAGCT+AGG + chr1_1:24887650-24887669 Msa0015390:CDS 65.0%
GGAGAAAGCTTCGCCGGAGG+AGG + chr1_1:24887765-24887784 Msa0015390:CDS 65.0%
GCCGGAGGAGGTAGTTACGG+CGG + chr1_1:24887777-24887796 Msa0015390:CDS 65.0%
GCCGCCGTAACTACCTCCTC+CGG - chr1_1:24887781-24887800 None:intergenic 65.0%
TCCAGCGTGGCAGTTACCGG+CGG + chr1_1:24887822-24887841 Msa0015390:CDS 65.0%
CCGGCGGTGAAACCGAAGAG+TGG + chr1_1:24887838-24887857 Msa0015390:CDS 65.0%
GATCGTCACCGTCGTGTCGG+AGG + chr1_1:24887552-24887571 Msa0015390:CDS 65.0%
GGATCTCTCCGTCGGCAGCT+AGG + chr1_1:24887650-24887669 Msa0015390:CDS 65.0%
GGAGAAAGCTTCGCCGGAGG+AGG + chr1_1:24887765-24887784 Msa0015390:CDS 65.0%
GCCGGAGGAGGTAGTTACGG+CGG + chr1_1:24887777-24887796 Msa0015390:CDS 65.0%
GCCGCCGTAACTACCTCCTC+CGG - chr1_1:24887781-24887800 None:intergenic 65.0%
TCCAGCGTGGCAGTTACCGG+CGG + chr1_1:24887822-24887841 Msa0015390:CDS 65.0%
CCGGCGGTGAAACCGAAGAG+TGG + chr1_1:24887838-24887857 Msa0015390:CDS 65.0%
CGTCACCGTCGTGTCGGAGG+CGG + chr1_1:24887555-24887574 Msa0015390:CDS 70.0%
CTTCGCCGCCTCCGACACGA+CGG - chr1_1:24887563-24887582 None:intergenic 70.0%
GCAAGTCTCCGATGCGGCGG+CGG + chr1_1:24887678-24887697 Msa0015390:CDS 70.0%
CTCCGATGCGGCGGCGGTAA+AGG + chr1_1:24887684-24887703 Msa0015390:CDS 70.0%
CAGCGACGGTGAGTCCAGCG+TGG + chr1_1:24887809-24887828 Msa0015390:CDS 70.0%
ACCGCCGGTAACTGCCACGC+TGG - chr1_1:24887826-24887845 None:intergenic 70.0%
CGTCACCGTCGTGTCGGAGG+CGG + chr1_1:24887555-24887574 Msa0015390:CDS 70.0%
CTTCGCCGCCTCCGACACGA+CGG - chr1_1:24887563-24887582 None:intergenic 70.0%
GCAAGTCTCCGATGCGGCGG+CGG + chr1_1:24887678-24887697 Msa0015390:CDS 70.0%
CTCCGATGCGGCGGCGGTAA+AGG + chr1_1:24887684-24887703 Msa0015390:CDS 70.0%
CAGCGACGGTGAGTCCAGCG+TGG + chr1_1:24887809-24887828 Msa0015390:CDS 70.0%
ACCGCCGGTAACTGCCACGC+TGG - chr1_1:24887826-24887845 None:intergenic 70.0%
GGCGGCGACAGCGACAGCGA+CGG + chr1_1:24887795-24887814 Msa0015390:CDS 75.0%
GGCGGCGACAGCGACAGCGA+CGG + chr1_1:24887795-24887814 Msa0015390:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 24886257 24888364 24886257 ID=Msa0015390;Name=Msa0015390
chr1_1 mRNA 24886257 24888364 24886257 ID=Msa0015390-mRNA-1;Parent=Msa0015390;Name=Msa0015390-mRNA-1;_AED=0.01;_eAED=0.01;_QI=402|1|1|1|1|1|3|449|358
chr1_1 exon 24886257 24887018 24886257 ID=Msa0015390-mRNA-1:exon:8556;Parent=Msa0015390-mRNA-1
chr1_1 exon 24887110 24887302 24887110 ID=Msa0015390-mRNA-1:exon:8557;Parent=Msa0015390-mRNA-1
chr1_1 exon 24887392 24888364 24887392 ID=Msa0015390-mRNA-1:exon:8558;Parent=Msa0015390-mRNA-1
chr1_1 five_prime_UTR 24886257 24886658 24886257 ID=Msa0015390-mRNA-1:five_prime_utr;Parent=Msa0015390-mRNA-1
chr1_1 CDS 24886659 24887018 24886659 ID=Msa0015390-mRNA-1:cds;Parent=Msa0015390-mRNA-1
chr1_1 CDS 24887110 24887302 24887110 ID=Msa0015390-mRNA-1:cds;Parent=Msa0015390-mRNA-1
chr1_1 CDS 24887392 24887915 24887392 ID=Msa0015390-mRNA-1:cds;Parent=Msa0015390-mRNA-1
chr1_1 three_prime_UTR 24887916 24888364 24887916 ID=Msa0015390-mRNA-1:three_prime_utr;Parent=Msa0015390-mRNA-1
Gene Sequence

>Msa0015390

ATGGCTCCGTTGAAGATCCAACCGATTGACATAGATTCAGAGAAAGCCACTACGGAACTGGTTCGCAATGAACCAGTTTCGAAGTGGAGGTTGAAGAGGTTTTTCGCTTTCGAGAAACCTTTTCCTAAGAACAATACCACTAAAGATGGTGGTGGTGGTGGAGTTGCTGAGTTGGAACCAAGCTCTGTTTGCTTGGCGAAAATGGTTCAGAGTTTCATGGAAGAACAACCGCAACCGCAACTTCAACCACCGTCTCGTAACCGCTGTAACTGCTTCAACGCTAACAGCTCCGATGAAGATGATTTCGATTTCAACGGCTATACACATGAATCAGTCACCGATTCAACTGACTCAGTTAAGAATTTGATTCCTTGTGTAAGTGTTGAAGAACGGAATTTACTAGCAGATGCAACGAAAATTGTTGAGAAGAATAGCAAAATTTACAAAAGAAAAGAAGATTTGATTAAGATCGTTGCTGAAAAGCTTCAATCTCTCGGTTACGATTCATCCATTTGCAAATCAAAATGGGAGAAAACAAATTCTTGTCCTGCTGGTGATTATCAATTCATTGATGCGATTGTGGAAGGTGAAACGTTGATTATTGATATCGATTTTCGATCAGAGTTTGAAATCGCGAGATCTACAAGTCAATATAAGACGATTCTTCAATCACTTCCGTATATTTTCGTCGGGAAAAAGGAGCGGTTGAAGCAGATCGTCACCGTCGTGTCGGAGGCGGCGAAGCAGAGTTTGAAGAAGAAAGGAATGCATGTTCCGCCGTGGAGGAAGCGCGATTACATGTTAGCGAAGTGGATCTCTCCGTCGGCAGCTAGGCCAAAGCAAGTCTCCGATGCGGCGGCGGTAAAGGAAATTGCTTCGTCGGAGGTGGATAGTGATTCTGGTGAATTGGAGCTGATTTTTGGTGAGGAGAAAGCTTCGCCGGAGGAGGTAGTTACGGCGGCGACAGCGACAGCGACGGTGAGTCCAGCGTGGCAGTTACCGGCGGTGAAACCGAAGAGTGGTGAAAGAGGAATGAAGGTGACTGGATTAGCTTCTTTGCTGAAGGAGAAACCATAG

Protein sequence

>Msa0015390

MAPLKIQPIDIDSEKATTELVRNEPVSKWRLKRFFAFEKPFPKNNTTKDGGGGGVAELEPSSVCLAKMVQSFMEEQPQPQLQPPSRNRCNCFNANSSDEDDFDFNGYTHESVTDSTDSVKNLIPCVSVEERNLLADATKIVEKNSKIYKRKEDLIKIVAEKLQSLGYDSSICKSKWEKTNSCPAGDYQFIDAIVEGETLIIDIDFRSEFEIARSTSQYKTILQSLPYIFVGKKERLKQIVTVVSEAAKQSLKKKGMHVPPWRKRDYMLAKWISPSAARPKQVSDAAAVKEIASSEVDSDSGELELIFGEEKASPEEVVTAATATATVSPAWQLPAVKPKSGERGMKVTGLASLLKEKP*