AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0422530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422530 MtrunA17_Chr3g0135001 90.307 423 20 7 1 407 1 418 0.0 686
Msa0422530 MtrunA17_Chr5g0400951 36.150 426 241 9 3 404 2 420 8.71e-57 193
Msa0422530 MtrunA17_Chr4g0064381 38.182 110 65 2 142 251 129 235 2.26e-21 95.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422530 AT1G10720.1 41.995 381 155 11 55 392 51 408 3.30e-67 219
Msa0422530 AT3G49800.1 36.215 428 225 10 3 392 2 419 1.92e-62 207
Msa0422530 AT5G65910.1 35.461 423 199 13 3 392 2 383 4.49e-51 177
Msa0422530 AT2G10950.1 34.975 203 107 7 62 251 25 215 3.91e-24 102
Msa0422530 AT2G10950.2 34.975 203 107 7 62 251 25 215 3.91e-24 102
Msa0422530 AT2G10950.3 34.975 203 107 7 62 251 25 215 3.91e-24 102

Find 114 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGACGATGATTCTGATTT+AGG 0.116038 3_2:+71938990 Msa0422530:CDS
AAACCCTAACTCGTCAATTT+TGG 0.118472 3_2:+71935475 Msa0422530:CDS
CTTCCGAAAATTTCAAATTC+AGG 0.205294 3_2:-71938669 None:intergenic
TTATTTATGGTGGATGTAAT+AGG 0.210532 3_2:+71939615 Msa0422530:three_prime_UTR
GGAAAATCCAACCAGGTTTC+AGG 0.211999 3_2:-71935732 None:intergenic
GAAATATGAGCATCTATTTC+AGG 0.220511 3_2:+71939497 Msa0422530:three_prime_UTR
GCATTATTATTATTGTTTCT+AGG 0.244863 3_2:-71935369 None:intergenic
TATACATTCTTGCACCTATA+TGG 0.263855 3_2:-71939540 None:intergenic
AGCTTCTCAAATTATGATTC+AGG 0.278846 3_2:+71938938 Msa0422530:CDS
TCCTGTTCTCCTTCCGAATT+CGG 0.293303 3_2:-71935633 None:intergenic
CAGACGATGATTCTGATTTA+GGG 0.320175 3_2:+71938991 Msa0422530:CDS
GTTGACACACCAAGGCAATT+AGG 0.324414 3_2:-71939673 None:intergenic
ATATGAGTGAAAGTTACTTT+TGG 0.337115 3_2:+71936078 Msa0422530:CDS
ATATCTTCTTCATTCACAAT+AGG 0.340594 3_2:-71939035 None:intergenic
AATTATTGAAATAATCACTA+TGG 0.344835 3_2:-71939708 None:intergenic
TATTTATGGTGGATGTAATA+GGG 0.355629 3_2:+71939616 Msa0422530:three_prime_UTR
TGGTGGATGTAATAGGGTTC+GGG 0.359587 3_2:+71939622 Msa0422530:three_prime_UTR
TACCCCAAAATTGACGAGTT+AGG 0.366692 3_2:-71935479 None:intergenic
CACCAAGGCAATTAGGATTC+AGG 0.370842 3_2:-71939666 None:intergenic
GATCTCGAGGATGATGATTA+TGG 0.375938 3_2:+71939068 Msa0422530:CDS
AAGTACACAATTGAAAGTTC+TGG 0.380859 3_2:+71938837 Msa0422530:CDS
AAAGAGAATTGCCAGATGTT+TGG 0.381680 3_2:+71939199 Msa0422530:three_prime_UTR
TTATCATCTTCCTCGTCAAT+TGG 0.385268 3_2:-71935753 None:intergenic
ATGGTGGATGTAATAGGGTT+CGG 0.385725 3_2:+71939621 Msa0422530:three_prime_UTR
TTCAAATCAAAATTCTGAAA+TGG 0.387588 3_2:+71935578 Msa0422530:CDS
AGGTGAGGTGGTTGGAGATT+CGG 0.393384 3_2:-71935349 None:intergenic
ACCCCAAAATTGACGAGTTA+GGG 0.399070 3_2:-71935478 None:intergenic
TATCTTCTTCATTCACAATA+GGG 0.403821 3_2:-71939034 None:intergenic
AAAACATCAAACATGGATAC+TGG 0.409853 3_2:+71939224 Msa0422530:three_prime_UTR
GAGAGAAGAGGTTAAAAGTT+GGG 0.412323 3_2:-71935180 None:intergenic
ATCAGGTGGGTGTTGCATTA+CGG 0.415921 3_2:-71935157 None:intergenic
GGATGATCCTCAACCGAATT+CGG 0.422197 3_2:+71935620 Msa0422530:CDS
CAACAACAACAGCAAGTTGA+TGG 0.425576 3_2:+71935546 Msa0422530:CDS
GACATGCCTCATCGGACATT+CGG 0.431916 3_2:+71938768 Msa0422530:CDS
TGAGAGAAGAGGTTAAAAGT+TGG 0.433249 3_2:-71935181 None:intergenic
ACCGAATTCGGAAGGAGAAC+AGG 0.434653 3_2:+71935632 Msa0422530:CDS
TGAGATTGAGAAATAGTTGA+TGG 0.437383 3_2:-71935525 None:intergenic
ATCAGATAAGTCGGTTATTG+AGG 0.438020 3_2:+71938869 Msa0422530:CDS
GTATTTCAAAACAACTCAAA+TGG 0.451191 3_2:+71939395 Msa0422530:three_prime_UTR
AGAGGTTAAAAGTTGGGATC+AGG 0.455029 3_2:-71935174 None:intergenic
CTCCTGAATCCTAATTGCCT+TGG 0.461505 3_2:+71939664 Msa0422530:three_prime_UTR
TCTCCTTCCGAATTCGGTTG+AGG 0.463205 3_2:-71935627 None:intergenic
ATAGGTGTCATCTGATAAGC+TGG 0.468819 3_2:-71938739 None:intergenic
GATATCGAAAACATGGTTGT+GGG 0.472505 3_2:+71939472 Msa0422530:three_prime_UTR
AGATATCGAAAACATGGTTG+TGG 0.473074 3_2:+71939471 Msa0422530:three_prime_UTR
TGAGAAATAGTTGATGGAGG+AGG 0.481171 3_2:-71935519 None:intergenic
TTCCTGCATCCACATTGATC+TGG 0.490551 3_2:-71938628 None:intergenic
TGGAACAAGGTGTGTTTCGT+GGG 0.498516 3_2:+71935598 Msa0422530:CDS
ATGAGGCATGTCATCAGAAT+AGG 0.499437 3_2:-71938757 None:intergenic
AGCCAGATCAATGTGGATGC+AGG 0.502125 3_2:+71938626 Msa0422530:CDS
AAATATGAGCATCTATTTCA+GGG 0.503499 3_2:+71939498 Msa0422530:three_prime_UTR
AACAACTTCTTTGTCTGTGA+TGG 0.504969 3_2:+71938797 Msa0422530:CDS
ATTATTATTGTTTCTAGGTG+AGG 0.514535 3_2:-71935364 None:intergenic
ATTCTTAGCGCAGCTAATCT+CGG 0.515912 3_2:-71936038 None:intergenic
ATTATTGTTTCTAGGTGAGG+TGG 0.517111 3_2:-71935361 None:intergenic
TTCGGAAGGAGAACAGGAAA+GGG 0.519132 3_2:+71935638 Msa0422530:CDS
TAACTTCGCTCACCATTATG+TGG 0.525605 3_2:-71939270 None:intergenic
ATGACGACGGTGATGATGAT+TGG 0.533375 3_2:+71938967 Msa0422530:CDS
GATTGAGAAATAGTTGATGG+AGG 0.533882 3_2:-71935522 None:intergenic
CCTAAATCAGAATCATCGTC+TGG 0.535306 3_2:-71938990 None:intergenic
TTGATTTCTTGTTCCGTGTG+AGG 0.537835 3_2:-71939176 None:intergenic
CGATTCGGAGAGAGTTTGCA+AGG 0.544073 3_2:-71935284 None:intergenic
TAGGGTTCGGGTTTCTACCC+CGG 0.547800 3_2:+71939634 Msa0422530:three_prime_UTR
AGCATGATCTCGTTGGTCCT+CGG 0.550779 3_2:-71935994 None:intergenic
TTTGATATACAATGCGCGGT+TGG 0.551967 3_2:+71935663 Msa0422530:CDS
GCAAGGCTAGGTGGGTTTGA+AGG 0.553989 3_2:+71939364 Msa0422530:three_prime_UTR
TTGTTTCTAGGTGAGGTGGT+TGG 0.556311 3_2:-71935357 None:intergenic
GGTTAAAAGTTGGGATCAGG+TGG 0.557489 3_2:-71935171 None:intergenic
ATCACATTTATCAGATAAGT+CGG 0.557852 3_2:+71938860 Msa0422530:CDS
TAGTAGCAATTCAGATTCAA+AGG 0.559727 3_2:+71939103 Msa0422530:CDS
GCTTAATAAACAAGATTCTG+AGG 0.560595 3_2:+71936130 Msa0422530:CDS
AGGGGCACTGGAACCTCACA+CGG 0.560694 3_2:+71939163 Msa0422530:three_prime_UTR
AAATGCTGTGATGATATTTG+AGG 0.563683 3_2:+71939296 Msa0422530:three_prime_UTR
GGTGTTGTTATTGAGAGAAG+AGG 0.567570 3_2:-71935192 None:intergenic
TCGCTATGCATCCTGAAACC+TGG 0.573694 3_2:+71935721 Msa0422530:CDS
CGCGGTTGGAATTACTGAGG+AGG 0.575478 3_2:+71935677 Msa0422530:CDS
ATGGAACAAGGTGTGTTTCG+TGG 0.577001 3_2:+71935597 Msa0422530:CDS
CAAAATTCTGAAATGGAACA+AGG 0.577149 3_2:+71935585 Msa0422530:CDS
AATAATGATGAAACGTTGCA+AGG 0.577943 3_2:+71935417 Msa0422530:CDS
ATTCGGAAGGAGAACAGGAA+AGG 0.580219 3_2:+71935637 Msa0422530:CDS
ATTCTGATGACATGCCTCAT+CGG 0.584652 3_2:+71938760 Msa0422530:CDS
ATCATGCTATGGTTGTTGAA+AGG 0.587242 3_2:+71936009 Msa0422530:CDS
CAAACACAGTTGACACACCA+AGG 0.593634 3_2:-71939681 None:intergenic
GATGAAACGTTGCAAGGTCG+TGG 0.598947 3_2:+71935423 Msa0422530:CDS
AGGATTCAGGAGAACAACAC+CGG 0.602635 3_2:-71939653 None:intergenic
TATATCTTTCAGCGATCTCG+AGG 0.605970 3_2:+71939055 Msa0422530:CDS
AGACGATGATTCTGATTTAG+GGG 0.611211 3_2:+71938992 Msa0422530:CDS
TTGATATTTGATGACAAACA+AGG 0.613012 3_2:-71939570 None:intergenic
CAACCATAGCATGATCTCGT+TGG 0.618660 3_2:-71936001 None:intergenic
GGAATTTGATATACAATGCG+CGG 0.621961 3_2:+71935659 Msa0422530:CDS
GATCCTCAACCGAATTCGGA+AGG 0.622984 3_2:+71935624 Msa0422530:CDS
GGATTCAGGAGAACAACACC+GGG 0.625463 3_2:-71939652 None:intergenic
GACGATGATTCTGATTTAGG+GGG 0.629733 3_2:+71938993 Msa0422530:CDS
TCAATAACAACACCATTCGA+AGG 0.630190 3_2:+71935201 Msa0422530:five_prime_UTR
TATGCATCCTGAAACCTGGT+TGG 0.632143 3_2:+71935725 Msa0422530:CDS
GTCAATTGGAAAATCCAACC+AGG 0.642583 3_2:-71935739 None:intergenic
GTTAAAAGTTGGGATCAGGT+GGG 0.652987 3_2:-71935170 None:intergenic
TAACTTTCACTCATATGACA+AGG 0.653724 3_2:-71936071 None:intergenic
GGACCAACGAGATCATGCTA+TGG 0.655051 3_2:+71935998 Msa0422530:CDS
GGGTTTGTTTGATTTCGTCG+AGG 0.657504 3_2:-71935458 None:intergenic
TAGGTGTCATCTGATAAGCT+GGG 0.666888 3_2:-71938738 None:intergenic
AGGTGGGTGTTGCATTACGG+TGG 0.672727 3_2:-71935154 None:intergenic
AACTTTCACTCATATGACAA+GGG 0.678075 3_2:-71936070 None:intergenic
TAGCAATTCAGATTCAAAGG+TGG 0.680098 3_2:+71939106 Msa0422530:CDS
TTCAAACCCACCTAGCCTTG+CGG 0.682308 3_2:-71939362 None:intergenic
GATTCGGAGAGAGTTTGCAA+GGG 0.683544 3_2:-71935283 None:intergenic
CTATATCCGAATGTCCGATG+AGG 0.695034 3_2:-71938774 None:intergenic
TCATGGTAGCCAGATCAATG+TGG 0.707205 3_2:+71938619 Msa0422530:CDS
ATTCAGGACTATGATGACGA+CGG 0.722996 3_2:+71938954 Msa0422530:CDS
GGAACAAGGTGTGTTTCGTG+GGG 0.730599 3_2:+71935599 Msa0422530:CDS
GACGAGGAAGATGATAACGA+CGG 0.733347 3_2:+71935759 Msa0422530:CDS
ATGCGCGGTTGGAATTACTG+AGG 0.743287 3_2:+71935674 Msa0422530:CDS
AACTTCAGATGACACGACTG+AGG 0.758277 3_2:+71939133 Msa0422530:exon
GATTCAGGAGAACAACACCG+GGG 0.849144 3_2:-71939651 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTATCAGAAA+TGG - chr3_2:71935875-71935894 None:intergenic 10.0%
!!! ATATTTTTAATTTTACCATT+AGG + chr3_2:71937260-71937279 Msa0422530:intron 10.0%
!!! TATTTTTAATTTTACCATTA+GGG + chr3_2:71937261-71937280 Msa0422530:intron 10.0%
!!! TGATTTTTTTCATTTATTTA+TGG + chr3_2:71939602-71939621 Msa0422530:three_prime_UTR 10.0%
!! TTTATGTATTTATAATTGCT+AGG + chr3_2:71936266-71936285 Msa0422530:intron 15.0%
!! AAAAAAAAATTCCTGATTAT+TGG + chr3_2:71936673-71936692 Msa0422530:intron 15.0%
!! ATTAAAACTCAAAATCTAAA+TGG + chr3_2:71936906-71936925 Msa0422530:intron 15.0%
!!! ATTTTTAATTTTACCATTAG+GGG + chr3_2:71937262-71937281 Msa0422530:intron 15.0%
!!! TTTTTTTCATTTATTTATGG+TGG + chr3_2:71939605-71939624 Msa0422530:three_prime_UTR 15.0%
!! AATTATTGAAATAATCACTA+TGG - chr3_2:71939711-71939730 None:intergenic 15.0%
!! AAAAACAAAAAATGTCATCA+TGG + chr3_2:71935250-71935269 Msa0422530:exon 20.0%
!!! GCATTATTATTATTGTTTCT+AGG - chr3_2:71935372-71935391 None:intergenic 20.0%
!!! TTCAAATCAAAATTCTGAAA+TGG + chr3_2:71935578-71935597 Msa0422530:CDS 20.0%
!! ATAATAATGTGCTAGATTAT+TGG + chr3_2:71935890-71935909 Msa0422530:intron 20.0%
!! TTGCTTGTAAATTATAAACT+AGG + chr3_2:71936442-71936461 Msa0422530:intron 20.0%
!! TTAATGATCTGCTATTAATT+GGG - chr3_2:71936726-71936745 None:intergenic 20.0%
!! TTTAATGATCTGCTATTAAT+TGG - chr3_2:71936727-71936746 None:intergenic 20.0%
!!! ATTCACTTTTAATTTGTTTC+TGG - chr3_2:71936888-71936907 None:intergenic 20.0%
!! GAAATAAAATAATGTTGAGT+CGG - chr3_2:71937203-71937222 None:intergenic 20.0%
!!! TTTTTAATTTTACCATTAGG+GGG + chr3_2:71937263-71937282 Msa0422530:intron 20.0%
!! ATTTAAATTTCTACTTCAGT+TGG + chr3_2:71937529-71937548 Msa0422530:intron 20.0%
!! TTTAAATTTCTACTTCAGTT+GGG + chr3_2:71937530-71937549 Msa0422530:intron 20.0%
!! GAATTAGAAGAAATCTTAAA+AGG - chr3_2:71937691-71937710 None:intergenic 20.0%
!! TAATCGTGTGTATTATAATT+TGG - chr3_2:71937869-71937888 None:intergenic 20.0%
!!! TTAAAAACTTATAACTTGTG+AGG - chr3_2:71938179-71938198 None:intergenic 20.0%
!! TAAAGTGAAAGATTTGTAAT+TGG + chr3_2:71938330-71938349 Msa0422530:intron 20.0%
!! AAAGTGAAAGATTTGTAATT+GGG + chr3_2:71938331-71938350 Msa0422530:intron 20.0%
!!! TATTTTAAAGCTACGATAAT+GGG + chr3_2:71938555-71938574 Msa0422530:intron 20.0%
!!! TTGTTTTCAGTTTTATTACT+TGG - chr3_2:71938900-71938919 None:intergenic 20.0%
!!! TTTTTTAGATATCGAAAACA+TGG + chr3_2:71939465-71939484 Msa0422530:three_prime_UTR 20.0%
!!! ATTATTATTGTTTCTAGGTG+AGG - chr3_2:71935367-71935386 None:intergenic 25.0%
!!! ATATGAGTGAAAGTTACTTT+TGG + chr3_2:71936078-71936097 Msa0422530:CDS 25.0%
!! ATTTTGTACTTTTGCATTCA+AGG + chr3_2:71936108-71936127 Msa0422530:CDS 25.0%
! TTGCTATCTAATAGAAATAC+TGG - chr3_2:71936326-71936345 None:intergenic 25.0%
! TTGTAAATTATAAACTAGGC+AGG + chr3_2:71936446-71936465 Msa0422530:intron 25.0%
! TGTAAATTATAAACTAGGCA+GGG + chr3_2:71936447-71936466 Msa0422530:intron 25.0%
! AATTAAGCATCATGCTTTAT+CGG - chr3_2:71936844-71936863 None:intergenic 25.0%
! AGTTCAAAACAACTAATTAC+TGG + chr3_2:71936930-71936949 Msa0422530:intron 25.0%
! TGAAGATAATGATTATGTTG+TGG - chr3_2:71937007-71937026 None:intergenic 25.0%
!!! ATCTTCATTTTTAGATAGTG+AGG + chr3_2:71937020-71937039 Msa0422530:intron 25.0%
!! TTTTTCCATATTTGTGATAG+CGG - chr3_2:71937332-71937351 None:intergenic 25.0%
! ACTATTACATATTGGGATTT+GGG - chr3_2:71937419-71937438 None:intergenic 25.0%
! CTATACCACTATTACATATT+GGG - chr3_2:71937426-71937445 None:intergenic 25.0%
! AATATGTAATAGTGGTATAG+CGG + chr3_2:71937426-71937445 Msa0422530:intron 25.0%
! GATAACAAAAACATTTAGAG+AGG - chr3_2:71937473-71937492 None:intergenic 25.0%
! GGCAAAAGAAATTTAGAAAA+TGG - chr3_2:71937670-71937689 None:intergenic 25.0%
!!! TTCCAGATTTTGATTGTTAT+TGG + chr3_2:71937750-71937769 Msa0422530:intron 25.0%
! TTCCAATAACAATCAAAATC+TGG - chr3_2:71937755-71937774 None:intergenic 25.0%
! AATCCAAGAATAGAGATTAT+TGG + chr3_2:71937773-71937792 Msa0422530:intron 25.0%
! TTTCCAATAATCTCTATTCT+TGG - chr3_2:71937779-71937798 None:intergenic 25.0%
! TCATATGTTAATGCCTAATA+CGG + chr3_2:71937909-71937928 Msa0422530:intron 25.0%
! ATATGTTTGGATTGATGAAA+AGG + chr3_2:71937932-71937951 Msa0422530:intron 25.0%
! TATGTTTGGATTGATGAAAA+GGG + chr3_2:71937933-71937952 Msa0422530:intron 25.0%
! TCGTTAAACATTCTATTGTT+TGG + chr3_2:71937970-71937989 Msa0422530:intron 25.0%
! AATAAAGCAAATATTCTCCA+TGG - chr3_2:71938387-71938406 None:intergenic 25.0%
!!! TATTTGCTTTATTTGAAGAG+AGG + chr3_2:71938394-71938413 Msa0422530:intron 25.0%
!! AAATGTTCCTTTTCTTAGTT+TGG + chr3_2:71938459-71938478 Msa0422530:intron 25.0%
!!! GTATTTTAAAGCTACGATAA+TGG + chr3_2:71938554-71938573 Msa0422530:intron 25.0%
!!! ATCTTAGTTTTAACTTTTGC+AGG + chr3_2:71938596-71938615 Msa0422530:intron 25.0%
!!! AAGCCTGAATTTGAAATTTT+CGG + chr3_2:71938666-71938685 Msa0422530:CDS 25.0%
! ATCACATTTATCAGATAAGT+CGG + chr3_2:71938860-71938879 Msa0422530:CDS 25.0%
! GAAAACAAAGATCTAAAAAG+TGG + chr3_2:71938912-71938931 Msa0422530:CDS 25.0%
! TATCTTCTTCATTCACAATA+GGG - chr3_2:71939037-71939056 None:intergenic 25.0%
! ATATCTTCTTCATTCACAAT+AGG - chr3_2:71939038-71939057 None:intergenic 25.0%
! TTTGGTAAAAACATCAAACA+TGG + chr3_2:71939217-71939236 Msa0422530:three_prime_UTR 25.0%
!!! TATCTTTTTTGTCCACATAA+TGG + chr3_2:71939258-71939277 Msa0422530:three_prime_UTR 25.0%
! GTATTTCAAAACAACTCAAA+TGG + chr3_2:71939395-71939414 Msa0422530:three_prime_UTR 25.0%
! AAATATGAGCATCTATTTCA+GGG + chr3_2:71939498-71939517 Msa0422530:three_prime_UTR 25.0%
!!! TTTGTTTTAAGACACCATAT+AGG + chr3_2:71939526-71939545 Msa0422530:three_prime_UTR 25.0%
!! TTGATATTTGATGACAAACA+AGG - chr3_2:71939573-71939592 None:intergenic 25.0%
!!! TTATTTATGGTGGATGTAAT+AGG + chr3_2:71939615-71939634 Msa0422530:three_prime_UTR 25.0%
!!! TATTTATGGTGGATGTAATA+GGG + chr3_2:71939616-71939635 Msa0422530:three_prime_UTR 25.0%
AATAATGATGAAACGTTGCA+AGG + chr3_2:71935417-71935436 Msa0422530:CDS 30.0%
TGAGATTGAGAAATAGTTGA+TGG - chr3_2:71935528-71935547 None:intergenic 30.0%
!! CAAAATTCTGAAATGGAACA+AGG + chr3_2:71935585-71935604 Msa0422530:CDS 30.0%
TTCATTCATAGCTACAGAAA+TGG - chr3_2:71935935-71935954 None:intergenic 30.0%
AACTTTCACTCATATGACAA+GGG - chr3_2:71936073-71936092 None:intergenic 30.0%
TAACTTTCACTCATATGACA+AGG - chr3_2:71936074-71936093 None:intergenic 30.0%
GCTTAATAAACAAGATTCTG+AGG + chr3_2:71936130-71936149 Msa0422530:CDS 30.0%
AAGGAATAAATGCAACAGTA+AGG - chr3_2:71936501-71936520 None:intergenic 30.0%
TTCCTTTAATTCATGTTGCT+TGG + chr3_2:71936515-71936534 Msa0422530:intron 30.0%
TAAGCCACAATATACAAAGA+GGG - chr3_2:71936541-71936560 None:intergenic 30.0%
TTAAGCCACAATATACAAAG+AGG - chr3_2:71936542-71936561 None:intergenic 30.0%
TTCTCAGAGGTTTGAATTTA+TGG + chr3_2:71936607-71936626 Msa0422530:intron 30.0%
AATGAGTTCTACCAATAATC+AGG - chr3_2:71936687-71936706 None:intergenic 30.0%
AAATCCGCTATAAGAAATAG+CGG + chr3_2:71936746-71936765 Msa0422530:intron 30.0%
!! TTATCCGCTATTTCTTATAG+CGG - chr3_2:71936753-71936772 None:intergenic 30.0%
TAATGATTATGTTGTGGAAG+AGG - chr3_2:71937001-71937020 None:intergenic 30.0%
!! GGATTCATTTTAGAAGTTGA+AGG - chr3_2:71937051-71937070 None:intergenic 30.0%
TATGAAATGAAGAGAGAAGA+CGG + chr3_2:71937100-71937119 Msa0422530:intron 30.0%
AATAACCGCTATCACAAATA+TGG + chr3_2:71937324-71937343 Msa0422530:intron 30.0%
CTATTACATATTGGGATTTG+GGG - chr3_2:71937418-71937437 None:intergenic 30.0%
CACTATTACATATTGGGATT+TGG - chr3_2:71937420-71937439 None:intergenic 30.0%
CAAATCCCAATATGTAATAG+TGG + chr3_2:71937418-71937437 Msa0422530:intron 30.0%
GCTATACCACTATTACATAT+TGG - chr3_2:71937427-71937446 None:intergenic 30.0%
!! TTAGAGAGGTGTTAAATAAC+CGG - chr3_2:71937459-71937478 None:intergenic 30.0%
! AAGCAATTTTAGATACAGAC+TGG + chr3_2:71937724-71937743 Msa0422530:intron 30.0%
ATTGTTATAGTCTTTCTTCC+TGG + chr3_2:71937811-71937830 Msa0422530:intron 30.0%
AATCCAAACATATCCGTATT+AGG - chr3_2:71937925-71937944 None:intergenic 30.0%
GATTGATGAAAAGGGATAAA+TGG + chr3_2:71937941-71937960 Msa0422530:intron 30.0%
ATGAAAAGGGATAAATGGAT+GGG + chr3_2:71937946-71937965 Msa0422530:intron 30.0%
TTGTTTGGATTGTTCAGAAT+AGG + chr3_2:71937985-71938004 Msa0422530:intron 30.0%
AAGAATGCAACATGATTTCA+TGG + chr3_2:71938014-71938033 Msa0422530:intron 30.0%
TTAGGACTTAGGATATCTAA+TGG - chr3_2:71938151-71938170 None:intergenic 30.0%
!! GATCTATCATTGTTTTACCA+TGG + chr3_2:71938367-71938386 Msa0422530:intron 30.0%
!! AAGTGTTTCTCATTTTTCCT+CGG + chr3_2:71938424-71938443 Msa0422530:intron 30.0%
CAATGAACCAAACTAAGAAA+AGG - chr3_2:71938469-71938488 None:intergenic 30.0%
CTTCCGAAAATTTCAAATTC+AGG - chr3_2:71938672-71938691 None:intergenic 30.0%
AAGTACACAATTGAAAGTTC+TGG + chr3_2:71938837-71938856 Msa0422530:CDS 30.0%
AGCTTCTCAAATTATGATTC+AGG + chr3_2:71938938-71938957 Msa0422530:CDS 30.0%
TAGTAGCAATTCAGATTCAA+AGG + chr3_2:71939103-71939122 Msa0422530:CDS 30.0%
!! TGATGTTTTTACCAAACATC+TGG - chr3_2:71939213-71939232 None:intergenic 30.0%
AAAACATCAAACATGGATAC+TGG + chr3_2:71939224-71939243 Msa0422530:three_prime_UTR 30.0%
AAATGCTGTGATGATATTTG+AGG + chr3_2:71939296-71939315 Msa0422530:three_prime_UTR 30.0%
GCAAAAAATTGTAGGGAAAA+AGG - chr3_2:71939343-71939362 None:intergenic 30.0%
!! AAACATCAGATTGCTTTTCT+TGG - chr3_2:71939437-71939456 None:intergenic 30.0%
GAAATATGAGCATCTATTTC+AGG + chr3_2:71939497-71939516 Msa0422530:three_prime_UTR 30.0%
TATACATTCTTGCACCTATA+TGG - chr3_2:71939543-71939562 None:intergenic 30.0%
GAGAGAAGAGGTTAAAAGTT+GGG - chr3_2:71935183-71935202 None:intergenic 35.0%
TGAGAGAAGAGGTTAAAAGT+TGG - chr3_2:71935184-71935203 None:intergenic 35.0%
TCAATAACAACACCATTCGA+AGG + chr3_2:71935201-71935220 Msa0422530:five_prime_UTR 35.0%
! CATCATCATCATCATCGATT+CGG - chr3_2:71935302-71935321 None:intergenic 35.0%
! ATCGATGATGATGATGATGA+TGG + chr3_2:71935303-71935322 Msa0422530:CDS 35.0%
!! ATTATTGTTTCTAGGTGAGG+TGG - chr3_2:71935364-71935383 None:intergenic 35.0%
! AAACCCTAACTCGTCAATTT+TGG + chr3_2:71935475-71935494 Msa0422530:CDS 35.0%
! AACCCTAACTCGTCAATTTT+GGG + chr3_2:71935476-71935495 Msa0422530:CDS 35.0%
!! GATTGAGAAATAGTTGATGG+AGG - chr3_2:71935525-71935544 None:intergenic 35.0%
GGAATTTGATATACAATGCG+CGG + chr3_2:71935659-71935678 Msa0422530:CDS 35.0%
TTATCATCTTCCTCGTCAAT+TGG - chr3_2:71935756-71935775 None:intergenic 35.0%
!!! TGTAGATTTTGAAATGTCCG+AGG + chr3_2:71935977-71935996 Msa0422530:intron 35.0%
ATCATGCTATGGTTGTTGAA+AGG + chr3_2:71936009-71936028 Msa0422530:CDS 35.0%
AACTGCGAAATAACAAACCT+GGG - chr3_2:71936168-71936187 None:intergenic 35.0%
AAACTGCGAAATAACAAACC+TGG - chr3_2:71936169-71936188 None:intergenic 35.0%
AGCAATCCAAGCTTGAAATT+TGG + chr3_2:71936341-71936360 Msa0422530:intron 35.0%
CTACTTCCAAATTTCAAGCT+TGG - chr3_2:71936350-71936369 None:intergenic 35.0%
CAAGCTTGAAATTTGGAAGT+AGG + chr3_2:71936348-71936367 Msa0422530:intron 35.0%
! TGGTTTTCAATGCCATCTTT+TGG + chr3_2:71936371-71936390 Msa0422530:intron 35.0%
! GGTTTTCAATGCCATCTTTT+GGG + chr3_2:71936372-71936391 Msa0422530:intron 35.0%
!!! CATCTTTTGGGACTTTACTA+GGG + chr3_2:71936384-71936403 Msa0422530:intron 35.0%
! ACTTTTGCATCCTTATCAGT+CGG - chr3_2:71936476-71936495 None:intergenic 35.0%
!! ATAAGAAATAGCGGATAACG+TGG + chr3_2:71936755-71936774 Msa0422530:intron 35.0%
! TTTTATGCTTTTCCCCCTAA+TGG - chr3_2:71937278-71937297 None:intergenic 35.0%
! AGCGGTTATTGATTACATAG+CGG - chr3_2:71937314-71937333 None:intergenic 35.0%
! TTTCTTCCTGGTGTGAATTT+TGG + chr3_2:71937823-71937842 Msa0422530:intron 35.0%
ATGCCTAATACGGATATGTT+TGG + chr3_2:71937919-71937938 Msa0422530:intron 35.0%
GATGAAAAGGGATAAATGGA+TGG + chr3_2:71937945-71937964 Msa0422530:intron 35.0%
ATATCTAATGGAGAGTAGAG+TGG - chr3_2:71938139-71938158 None:intergenic 35.0%
! ATAACTTGTGAGGCTATGTT+AGG - chr3_2:71938169-71938188 None:intergenic 35.0%
!!! GCTGTAGTTGTTTCTTCTTT+TGG + chr3_2:71938277-71938296 Msa0422530:intron 35.0%
!!! GTTTTAACTTTTGCAGGTCA+TGG + chr3_2:71938602-71938621 Msa0422530:intron 35.0%
AACAACTTCTTTGTCTGTGA+TGG + chr3_2:71938797-71938816 Msa0422530:CDS 35.0%
ATCAGATAAGTCGGTTATTG+AGG + chr3_2:71938869-71938888 Msa0422530:CDS 35.0%
CAGACGATGATTCTGATTTA+GGG + chr3_2:71938991-71939010 Msa0422530:CDS 35.0%
AGACGATGATTCTGATTTAG+GGG + chr3_2:71938992-71939011 Msa0422530:CDS 35.0%
TAGCAATTCAGATTCAAAGG+TGG + chr3_2:71939106-71939125 Msa0422530:CDS 35.0%
AAAGAGAATTGCCAGATGTT+TGG + chr3_2:71939199-71939218 Msa0422530:three_prime_UTR 35.0%
AGATATCGAAAACATGGTTG+TGG + chr3_2:71939471-71939490 Msa0422530:three_prime_UTR 35.0%
GATATCGAAAACATGGTTGT+GGG + chr3_2:71939472-71939491 Msa0422530:three_prime_UTR 35.0%
GTTAAAAGTTGGGATCAGGT+GGG - chr3_2:71935173-71935192 None:intergenic 40.0%
AGAGGTTAAAAGTTGGGATC+AGG - chr3_2:71935177-71935196 None:intergenic 40.0%
!! GGTGTTGTTATTGAGAGAAG+AGG - chr3_2:71935195-71935214 None:intergenic 40.0%
ACAAAAAAGCGACCTTCGAA+TGG - chr3_2:71935216-71935235 None:intergenic 40.0%
! ACCCTAACTCGTCAATTTTG+GGG + chr3_2:71935477-71935496 Msa0422530:CDS 40.0%
ACCCCAAAATTGACGAGTTA+GGG - chr3_2:71935481-71935500 None:intergenic 40.0%
TACCCCAAAATTGACGAGTT+AGG - chr3_2:71935482-71935501 None:intergenic 40.0%
!!! AACTCGTCAATTTTGGGGTA+TGG + chr3_2:71935482-71935501 Msa0422530:CDS 40.0%
!! TGAGAAATAGTTGATGGAGG+AGG - chr3_2:71935522-71935541 None:intergenic 40.0%
! CAACAACAACAGCAAGTTGA+TGG + chr3_2:71935546-71935565 Msa0422530:CDS 40.0%
TTTGATATACAATGCGCGGT+TGG + chr3_2:71935663-71935682 Msa0422530:CDS 40.0%
GTCAATTGGAAAATCCAACC+AGG - chr3_2:71935742-71935761 None:intergenic 40.0%
! GTTGGATTTTCCAATTGACG+AGG + chr3_2:71935743-71935762 Msa0422530:CDS 40.0%
ATTCTTAGCGCAGCTAATCT+CGG - chr3_2:71936041-71936060 None:intergenic 40.0%
ACTGCGAAATAACAAACCTG+GGG - chr3_2:71936167-71936186 None:intergenic 40.0%
GATAACAAGAGCAGTGTGAA+AGG - chr3_2:71936198-71936217 None:intergenic 40.0%
! ACACTGCTCTTGTTATCTCT+TGG + chr3_2:71936201-71936220 Msa0422530:intron 40.0%
GCTTGAAATTTGGAAGTAGG+TGG + chr3_2:71936351-71936370 Msa0422530:intron 40.0%
CCTAGTAAAGTCCCAAAAGA+TGG - chr3_2:71936386-71936405 None:intergenic 40.0%
!!! CCATCTTTTGGGACTTTACT+AGG + chr3_2:71936383-71936402 Msa0422530:intron 40.0%
GGCCAAGCAACATGAATTAA+AGG - chr3_2:71936520-71936539 None:intergenic 40.0%
TTGGCCCTCTTTGTATATTG+TGG + chr3_2:71936534-71936553 Msa0422530:intron 40.0%
! CAATCTGAAGTTCTTCTCAG+AGG + chr3_2:71936594-71936613 Msa0422530:intron 40.0%
ATAACGTGGCAGGAAAATAG+CGG + chr3_2:71936769-71936788 Msa0422530:intron 40.0%
TTAGTGATGAGAGGTTGCTT+AGG + chr3_2:71937138-71937157 Msa0422530:intron 40.0%
AAATATCACATGAGCTGCAC+AGG - chr3_2:71937246-71937265 None:intergenic 40.0%
GGAAAAAACCACCACTATTG+CGG + chr3_2:71937345-71937364 Msa0422530:intron 40.0%
GTCAGTGTCTCAATACTCAA+TGG + chr3_2:71937493-71937512 Msa0422530:intron 40.0%
GAGCACACAAGAATATACAG+GGG - chr3_2:71937648-71937667 None:intergenic 40.0%
GGAGCACACAAGAATATACA+GGG - chr3_2:71937649-71937668 None:intergenic 40.0%
TGGAGCACACAAGAATATAC+AGG - chr3_2:71937650-71937669 None:intergenic 40.0%
GTGAGATATTGGATGGAATG+GGG - chr3_2:71938046-71938065 None:intergenic 40.0%
GGTGAGATATTGGATGGAAT+GGG - chr3_2:71938047-71938066 None:intergenic 40.0%
ATTCTGCTCAAAATCCAAGG+GGG - chr3_2:71938074-71938093 None:intergenic 40.0%
CATTCTGCTCAAAATCCAAG+GGG - chr3_2:71938075-71938094 None:intergenic 40.0%
CCATTCTGCTCAAAATCCAA+GGG - chr3_2:71938076-71938095 None:intergenic 40.0%
! CCTTGGATTTTGAGCAGAAT+GGG + chr3_2:71938074-71938093 Msa0422530:intron 40.0%
GAGTTGGCTAATAATCGAGT+TGG + chr3_2:71938252-71938271 Msa0422530:intron 40.0%
CATTTCAACACTACTTTCCG+AGG - chr3_2:71938444-71938463 None:intergenic 40.0%
! TAGGTGTCATCTGATAAGCT+GGG - chr3_2:71938741-71938760 None:intergenic 40.0%
! ATAGGTGTCATCTGATAAGC+TGG - chr3_2:71938742-71938761 None:intergenic 40.0%
ATGAGGCATGTCATCAGAAT+AGG - chr3_2:71938760-71938779 None:intergenic 40.0%
ATTCTGATGACATGCCTCAT+CGG + chr3_2:71938760-71938779 Msa0422530:CDS 40.0%
! ATTCAGGACTATGATGACGA+CGG + chr3_2:71938954-71938973 Msa0422530:CDS 40.0%
CCTAAATCAGAATCATCGTC+TGG - chr3_2:71938993-71939012 None:intergenic 40.0%
CCAGACGATGATTCTGATTT+AGG + chr3_2:71938990-71939009 Msa0422530:CDS 40.0%
GACGATGATTCTGATTTAGG+GGG + chr3_2:71938993-71939012 Msa0422530:CDS 40.0%
TATATCTTTCAGCGATCTCG+AGG + chr3_2:71939055-71939074 Msa0422530:CDS 40.0%
GATCTCGAGGATGATGATTA+TGG + chr3_2:71939068-71939087 Msa0422530:CDS 40.0%
! ACACGACTGAGGTGATTTTA+GGG + chr3_2:71939144-71939163 Msa0422530:three_prime_UTR 40.0%
TTGATTTCTTGTTCCGTGTG+AGG - chr3_2:71939179-71939198 None:intergenic 40.0%
TAACTTCGCTCACCATTATG+TGG - chr3_2:71939273-71939292 None:intergenic 40.0%
CCTTGCGGCAAAAAATTGTA+GGG - chr3_2:71939350-71939369 None:intergenic 40.0%
!! ATGGTGGATGTAATAGGGTT+CGG + chr3_2:71939621-71939640 Msa0422530:three_prime_UTR 40.0%
! ATCAGGTGGGTGTTGCATTA+CGG - chr3_2:71935160-71935179 None:intergenic 45.0%
GGTTAAAAGTTGGGATCAGG+TGG - chr3_2:71935174-71935193 None:intergenic 45.0%
GATTCGGAGAGAGTTTGCAA+GGG - chr3_2:71935286-71935305 None:intergenic 45.0%
!! TTGTTTCTAGGTGAGGTGGT+TGG - chr3_2:71935360-71935379 None:intergenic 45.0%
! GGGTTTGTTTGATTTCGTCG+AGG - chr3_2:71935461-71935480 None:intergenic 45.0%
ATGGAACAAGGTGTGTTTCG+TGG + chr3_2:71935597-71935616 Msa0422530:CDS 45.0%
TGGAACAAGGTGTGTTTCGT+GGG + chr3_2:71935598-71935617 Msa0422530:CDS 45.0%
GGATGATCCTCAACCGAATT+CGG + chr3_2:71935620-71935639 Msa0422530:CDS 45.0%
TCCTGTTCTCCTTCCGAATT+CGG - chr3_2:71935636-71935655 None:intergenic 45.0%
ATTCGGAAGGAGAACAGGAA+AGG + chr3_2:71935637-71935656 Msa0422530:CDS 45.0%
TTCGGAAGGAGAACAGGAAA+GGG + chr3_2:71935638-71935657 Msa0422530:CDS 45.0%
TATGCATCCTGAAACCTGGT+TGG + chr3_2:71935725-71935744 Msa0422530:CDS 45.0%
GGAAAATCCAACCAGGTTTC+AGG - chr3_2:71935735-71935754 None:intergenic 45.0%
! GACGAGGAAGATGATAACGA+CGG + chr3_2:71935759-71935778 Msa0422530:CDS 45.0%
CAACCATAGCATGATCTCGT+TGG - chr3_2:71936004-71936023 None:intergenic 45.0%
AAGAGCAGTGTGAAAGGCAA+AGG - chr3_2:71936192-71936211 None:intergenic 45.0%
! AAATAGCGGAAGCTGCAAAG+TGG + chr3_2:71936783-71936802 Msa0422530:intron 45.0%
CCTTCAAGACATTGATCACG+AGG - chr3_2:71937072-71937091 None:intergenic 45.0%
CCTCGTGATCAATGTCTTGA+AGG + chr3_2:71937069-71937088 Msa0422530:intron 45.0%
AATGAAGAGAGAAGACGGAG+AGG + chr3_2:71937105-71937124 Msa0422530:intron 45.0%
AGAGGCAGTTTAGTGATGAG+AGG + chr3_2:71937129-71937148 Msa0422530:intron 45.0%
AAAAACCACCACTATTGCGG+TGG + chr3_2:71937348-71937367 Msa0422530:intron 45.0%
AGCGGAATTGCAATAGCGTA+TGG + chr3_2:71937376-71937395 Msa0422530:intron 45.0%
GCGGAATTGCAATAGCGTAT+GGG + chr3_2:71937377-71937396 Msa0422530:intron 45.0%
! ATTTGGGGCAACTGTGATGA+AGG - chr3_2:71937403-71937422 None:intergenic 45.0%
! CTTCCTGGTGTGAATTTTGG+TGG + chr3_2:71937826-71937845 Msa0422530:intron 45.0%
GGGTGAGATATTGGATGGAA+TGG - chr3_2:71938048-71938067 None:intergenic 45.0%
! CCCTTGGATTTTGAGCAGAA+TGG + chr3_2:71938073-71938092 Msa0422530:intron 45.0%
CCCATTCTGCTCAAAATCCA+AGG - chr3_2:71938077-71938096 None:intergenic 45.0%
! GGATTTTGAGCAGAATGGGA+TGG + chr3_2:71938078-71938097 Msa0422530:intron 45.0%
GTGAGGCTATGTTAGGACTT+AGG - chr3_2:71938162-71938181 None:intergenic 45.0%
AGCCAACTCATCAAAGTGCA+CGG - chr3_2:71938241-71938260 None:intergenic 45.0%
TCATGGTAGCCAGATCAATG+TGG + chr3_2:71938619-71938638 Msa0422530:CDS 45.0%
TTCCTGCATCCACATTGATC+TGG - chr3_2:71938631-71938650 None:intergenic 45.0%
CTATATCCGAATGTCCGATG+AGG - chr3_2:71938777-71938796 None:intergenic 45.0%
! ATGACGACGGTGATGATGAT+TGG + chr3_2:71938967-71938986 Msa0422530:CDS 45.0%
TCTGATTTAGGGGGATATCG+TGG + chr3_2:71939002-71939021 Msa0422530:CDS 45.0%
AACTTCAGATGACACGACTG+AGG + chr3_2:71939133-71939152 Msa0422530:exon 45.0%
! GACACGACTGAGGTGATTTT+AGG + chr3_2:71939143-71939162 Msa0422530:three_prime_UTR 45.0%
! CACGACTGAGGTGATTTTAG+GGG + chr3_2:71939145-71939164 Msa0422530:three_prime_UTR 45.0%
!!! CCCTACAATTTTTTGCCGCA+AGG + chr3_2:71939347-71939366 Msa0422530:three_prime_UTR 45.0%
GCCTTGCGGCAAAAAATTGT+AGG - chr3_2:71939351-71939370 None:intergenic 45.0%
!!! CAATTTTTTGCCGCAAGGCT+AGG + chr3_2:71939352-71939371 Msa0422530:three_prime_UTR 45.0%
! TGGTGGATGTAATAGGGTTC+GGG + chr3_2:71939622-71939641 Msa0422530:three_prime_UTR 45.0%
AGGATTCAGGAGAACAACAC+CGG - chr3_2:71939656-71939675 None:intergenic 45.0%
CTCCTGAATCCTAATTGCCT+TGG + chr3_2:71939664-71939683 Msa0422530:three_prime_UTR 45.0%
CACCAAGGCAATTAGGATTC+AGG - chr3_2:71939669-71939688 None:intergenic 45.0%
GTTGACACACCAAGGCAATT+AGG - chr3_2:71939676-71939695 None:intergenic 45.0%
CAAACACAGTTGACACACCA+AGG - chr3_2:71939684-71939703 None:intergenic 45.0%
! CGATTCGGAGAGAGTTTGCA+AGG - chr3_2:71935287-71935306 None:intergenic 50.0%
AGGTGAGGTGGTTGGAGATT+CGG - chr3_2:71935352-71935371 None:intergenic 50.0%
GATGAAACGTTGCAAGGTCG+TGG + chr3_2:71935423-71935442 Msa0422530:CDS 50.0%
GGAACAAGGTGTGTTTCGTG+GGG + chr3_2:71935599-71935618 Msa0422530:CDS 50.0%
GATCCTCAACCGAATTCGGA+AGG + chr3_2:71935624-71935643 Msa0422530:CDS 50.0%
TCTCCTTCCGAATTCGGTTG+AGG - chr3_2:71935630-71935649 None:intergenic 50.0%
ACCGAATTCGGAAGGAGAAC+AGG + chr3_2:71935632-71935651 Msa0422530:CDS 50.0%
ATGCGCGGTTGGAATTACTG+AGG + chr3_2:71935674-71935693 Msa0422530:CDS 50.0%
TCGCTATGCATCCTGAAACC+TGG + chr3_2:71935721-71935740 Msa0422530:CDS 50.0%
AGCATGATCTCGTTGGTCCT+CGG - chr3_2:71935997-71936016 None:intergenic 50.0%
GGACCAACGAGATCATGCTA+TGG + chr3_2:71935998-71936017 Msa0422530:CDS 50.0%
!! TGAGGTTTTGTCTACACCCC+AGG + chr3_2:71936148-71936167 Msa0422530:CDS 50.0%
CACACGAGAGAGAACTACAG+AGG - chr3_2:71936419-71936438 None:intergenic 50.0%
!! GAAATAGCGGATAACGTGGC+AGG + chr3_2:71936759-71936778 Msa0422530:intron 50.0%
ATGAGAGGTTGCTTAGGTCG+TGG + chr3_2:71937144-71937163 Msa0422530:intron 50.0%
TGAGAGGTTGCTTAGGTCGT+GGG + chr3_2:71937145-71937164 Msa0422530:intron 50.0%
GTTGAGTCGGTGATGACATG+AGG - chr3_2:71937190-71937209 None:intergenic 50.0%
ACTATTGCGGTGGTAGGTAG+CGG + chr3_2:71937358-71937377 Msa0422530:intron 50.0%
GTGGTATAGCGGCGTTATAC+CGG + chr3_2:71937437-71937456 Msa0422530:intron 50.0%
GAGCCACCAAAATTCACACC+AGG - chr3_2:71937832-71937851 None:intergenic 50.0%
TGCTCAAAATCCAAGGGGGT+GGG - chr3_2:71938070-71938089 None:intergenic 50.0%
GACCGTGCACTTTGATGAGT+TGG + chr3_2:71938236-71938255 Msa0422530:intron 50.0%
AGCCAGATCAATGTGGATGC+AGG + chr3_2:71938626-71938645 Msa0422530:CDS 50.0%
GACATGCCTCATCGGACATT+CGG + chr3_2:71938768-71938787 Msa0422530:CDS 50.0%
!! TGAGGTGATTTTAGGGGCAC+TGG + chr3_2:71939151-71939170 Msa0422530:three_prime_UTR 50.0%
!!! TTTTTTGCCGCAAGGCTAGG+TGG + chr3_2:71939355-71939374 Msa0422530:three_prime_UTR 50.0%
! TTTTTGCCGCAAGGCTAGGT+GGG + chr3_2:71939356-71939375 Msa0422530:three_prime_UTR 50.0%
!! TTCAAACCCACCTAGCCTTG+CGG - chr3_2:71939365-71939384 None:intergenic 50.0%
GATTCAGGAGAACAACACCG+GGG - chr3_2:71939654-71939673 None:intergenic 50.0%
GGATTCAGGAGAACAACACC+GGG - chr3_2:71939655-71939674 None:intergenic 50.0%
! AGGTGGGTGTTGCATTACGG+TGG - chr3_2:71935157-71935176 None:intergenic 55.0%
CGCGGTTGGAATTACTGAGG+AGG + chr3_2:71935677-71935696 Msa0422530:CDS 55.0%
GAGAGGTTGCTTAGGTCGTG+GGG + chr3_2:71937146-71937165 Msa0422530:intron 55.0%
TTGCTTAGGTCGTGGGGTTG+AGG + chr3_2:71937152-71937171 Msa0422530:intron 55.0%
TGCTTAGGTCGTGGGGTTGA+GGG + chr3_2:71937153-71937172 Msa0422530:intron 55.0%
ACCACCACTATTGCGGTGGT+AGG + chr3_2:71937352-71937371 Msa0422530:intron 55.0%
ACCTACCACCGCAATAGTGG+TGG - chr3_2:71937356-71937375 None:intergenic 55.0%
GCTACCTACCACCGCAATAG+TGG - chr3_2:71937359-71937378 None:intergenic 55.0%
GGTGGGGGTGAGATATTGGA+TGG - chr3_2:71938053-71938072 None:intergenic 55.0%
CTCAAAATCCAAGGGGGTGG+GGG - chr3_2:71938068-71938087 None:intergenic 55.0%
GCTCAAAATCCAAGGGGGTG+GGG - chr3_2:71938069-71938088 None:intergenic 55.0%
CTGCTCAAAATCCAAGGGGG+TGG - chr3_2:71938071-71938090 None:intergenic 55.0%
! GCAAGGCTAGGTGGGTTTGA+AGG + chr3_2:71939364-71939383 Msa0422530:three_prime_UTR 55.0%
! TAGGGTTCGGGTTTCTACCC+CGG + chr3_2:71939634-71939653 Msa0422530:three_prime_UTR 55.0%
GGCAGGGTGACCGACTGATA+AGG + chr3_2:71936463-71936482 Msa0422530:intron 60.0%
GAGAGAAGACGGAGAGGCAG+AGG + chr3_2:71937111-71937130 Msa0422530:intron 60.0%
AGGGGGTGGGGGTGAGATAT+TGG - chr3_2:71938057-71938076 None:intergenic 60.0%
ATATCTCACCCCCACCCCCT+TGG + chr3_2:71938057-71938076 Msa0422530:intron 60.0%
!! AGGGGCACTGGAACCTCACA+CGG + chr3_2:71939163-71939182 Msa0422530:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 71935133 71939731 71935133 ID=Msa0422530;Name=Msa0422530
chr3_2 mRNA 71935133 71939731 71935133 ID=Msa0422530-mRNA-1;Parent=Msa0422530;Name=Msa0422530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=128|1|1|1|1|1|3|598|407
chr3_2 exon 71935133 71935780 71935133 ID=Msa0422530-mRNA-1:exon:17617;Parent=Msa0422530-mRNA-1
chr3_2 exon 71935982 71936169 71935982 ID=Msa0422530-mRNA-1:exon:17618;Parent=Msa0422530-mRNA-1
chr3_2 exon 71938618 71939731 71938618 ID=Msa0422530-mRNA-1:exon:17619;Parent=Msa0422530-mRNA-1
chr3_2 five_prime_UTR 71935133 71935260 71935133 ID=Msa0422530-mRNA-1:five_prime_utr;Parent=Msa0422530-mRNA-1
chr3_2 CDS 71935261 71935780 71935261 ID=Msa0422530-mRNA-1:cds;Parent=Msa0422530-mRNA-1
chr3_2 CDS 71935982 71936169 71935982 ID=Msa0422530-mRNA-1:cds;Parent=Msa0422530-mRNA-1
chr3_2 CDS 71938618 71939133 71938618 ID=Msa0422530-mRNA-1:cds;Parent=Msa0422530-mRNA-1
chr3_2 three_prime_UTR 71939134 71939731 71939134 ID=Msa0422530-mRNA-1:three_prime_utr;Parent=Msa0422530-mRNA-1
Gene Sequence

>Msa0422530

ATGTCATCATGGTTTGCTCGTTCCCTTGCAAACTCTCTCCGAATCGATGATGATGATGATGATGGTGACATTCAAAACGACGTCGTAACCGAATCTCCAACCACCTCACCTAGAAACAATAATAATAATGCAGATGAATCAGAAGAACAAGAAGAAAATAATGATGAAACGTTGCAAGGTCGTGGTGTTAAAGAAGACCTCGACGAAATCAAACAAACCCTAACTCGTCAATTTTGGGGTATGGCTTCTTTTCTCGCTCCTCCTCCATCAACTATTTCTCAATCTCAACAACAACAGCAAGTTGATGGCGATGTAATTTCAAATCAAAATTCTGAAATGGAACAAGGTGTGTTTCGTGGGGATGATCCTCAACCGAATTCGGAAGGAGAACAGGAAAGGGAATTTGATATACAATGCGCGGTTGGAATTACTGAGGAGGTTTTGACTTTTGCAATGAATATCGCTATGCATCCTGAAACCTGGTTGGATTTTCCAATTGACGAGGAAGATGATAACGACGATTTTGAAATGTCCGAGGACCAACGAGATCATGCTATGGTTGTTGAAAGGCTTGCTCCGAGATTAGCTGCGCTAAGAATTGAATTGTGCCCTTGTCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACAAGATTCTGAGGTTTTGTCTACACCCCAGGTCATGGTAGCCAGATCAATGTGGATGCAGGAATTGCAGAAACAAACAAAGCCTGAATTTGAAATTTTCGGAAGAAGTGATCTCTACTCAAGAGACAATGCTCAGCATCATGATTCTACTCCCAGCTTATCAGATGACACCTATTCTGATGACATGCCTCATCGGACATTCGGATATAGAACAACTTCTTTGTCTGTGATGGCAGATAATGAGTCTGAAAAGTACACAATTGAAAGTTCTGGATCACATTTATCAGATAAGTCGGTTATTGAGGAAAATCCAAGTAATAAAACTGAAAACAAAGATCTAAAAAGTGGTCGAGCTTCTCAAATTATGATTCAGGACTATGATGACGACGGTGATGATGATTGGCCAGACGATGATTCTGATTTAGGGGGATATCGTGGAACAGCGCTCCCTATTGTGAATGAAGAAGATATATCTTTCAGCGATCTCGAGGATGATGATTATGGCATTAAACATGTTAGTAGCAATTCAGATTCAAAGGTGGTGTGA
Protein sequence

>Msa0422530

MSSWFARSLANSLRIDDDDDDGDIQNDVVTESPTTSPRNNNNNADESEEQEENNDETLQGRGVKEDLDEIKQTLTRQFWGMASFLAPPPSTISQSQQQQQVDGDVISNQNSEMEQGVFRGDDPQPNSEGEQEREFDIQCAVGITEEVLTFAMNIAMHPETWLDFPIDEEDDNDDFEMSEDQRDHAMVVERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDSEVLSTPQVMVARSMWMQELQKQTKPEFEIFGRSDLYSRDNAQHHDSTPSLSDDTYSDDMPHRTFGYRTTSLSVMADNESEKYTIESSGSHLSDKSVIEENPSNKTENKDLKSGRASQIMIQDYDDDGDDDWPDDDSDLGGYRGTALPIVNEEDISFSDLEDDDYGIKHVSSNSDSKVV*