AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0425830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425830 MtrunA17_Chr3g0127941 93.228 694 13 3 1 670 1 684 0.0 1327
Msa0425830 MtrunA17_Chr7g0276361 38.339 626 322 16 48 658 7 583 3.21e-105 332
Msa0425830 MtrunA17_Chr8g0345901 39.075 389 182 11 42 400 23 386 1.84e-66 230
Msa0425830 MtrunA17_Chr4g0030271 58.015 131 55 0 46 176 80 210 2.29e-48 182
Msa0425830 MtrunA17_Chr4g0030271 76.000 50 12 0 609 658 714 763 7.92e-18 87.8
Msa0425830 MtrunA17_Chr3g0091641 45.038 131 72 0 49 179 18 148 3.56e-30 125
Msa0425830 MtrunA17_Chr3g0091641 68.889 45 14 0 616 660 498 542 1.22e-12 70.9
Msa0425830 MtrunA17_Chr4g0061021 43.704 135 75 1 49 182 27 161 8.73e-30 124
Msa0425830 MtrunA17_Chr4g0061021 73.333 45 12 0 616 660 505 549 4.71e-14 75.5
Msa0425830 MtrunA17_Chr1g0161431 42.276 123 66 2 55 176 15 133 4.67e-24 107
Msa0425830 MtrunA17_Chr3g0123131 41.129 124 68 2 55 177 17 136 1.39e-23 105
Msa0425830 MtrunA17_Chr2g0304841 37.903 124 72 2 55 177 22 141 2.08e-23 105
Msa0425830 MtrunA17_Chr4g0074411 37.903 124 72 2 55 177 22 141 1.13e-22 102
Msa0425830 MtrunA17_Chr3g0137101 37.097 124 73 2 55 177 12 131 3.28e-22 101
Msa0425830 MtrunA17_Chr4g0067981 39.516 124 70 2 55 177 35 154 8.97e-22 100
Msa0425830 MtrunA17_Chr2g0294911 39.516 124 70 2 55 177 33 152 2.14e-21 99.0
Msa0425830 MtrunA17_Chr4g0074401 37.097 124 73 2 55 177 21 140 2.25e-21 98.6
Msa0425830 MtrunA17_Chr8g0376881 33.523 176 102 5 55 225 29 194 3.67e-21 97.8
Msa0425830 MtrunA17_Chr1g0149841 36.290 124 74 2 55 177 9 128 5.92e-21 96.7
Msa0425830 MtrunA17_Chr3g0134481 37.500 136 75 3 55 189 12 138 1.94e-20 89.7
Msa0425830 MtrunA17_Chr1g0149851 36.290 124 74 2 55 177 9 128 9.10e-20 93.6
Msa0425830 MtrunA17_Chr7g0275401 33.871 124 77 2 55 177 9 128 8.41e-18 84.7
Msa0425830 MtrunA17_Chr7g0275891 33.600 125 77 3 55 177 9 129 1.78e-16 81.6
Msa0425830 MtrunA17_Chr7g0256551 29.496 139 80 2 55 175 9 147 1.35e-15 77.0
Msa0425830 MtrunA17_Chr3g0134461 34.677 124 77 2 55 177 12 132 1.99e-14 72.4
Msa0425830 MtrunA17_Chr1g0170741 29.630 135 83 1 55 177 8 142 2.37e-14 72.4
Msa0425830 MtrunA17_Chr4g0059571 30.000 130 82 1 55 175 26 155 5.19e-14 71.6
Msa0425830 MtrunA17_Chr3g0118211 30.986 142 87 3 55 185 23 164 1.10e-13 70.5
Msa0425830 MtrunA17_Chr5g0414931 29.412 136 83 2 55 177 16 151 1.30e-13 70.9
Msa0425830 MtrunA17_Chr1g0181811 28.902 346 176 14 364 658 410 736 2.87e-13 73.2
Msa0425830 MtrunA17_Chr4g0074421 41.558 77 40 2 102 177 3 75 3.31e-13 68.9
Msa0425830 MtrunA17_Chr4g0054981 33.333 132 79 4 43 173 8 131 4.59e-13 72.4
Msa0425830 MtrunA17_Chr3g0082861 29.078 141 82 2 55 177 4 144 2.76e-12 65.5
Msa0425830 MtrunA17_Chr3g0128691 31.746 126 71 3 57 169 20 143 9.54e-12 63.5
Msa0425830 MtrunA17_Chr5g0400241 31.061 132 82 4 43 173 8 131 9.83e-12 68.2
Msa0425830 MtrunA17_Chr3g0136701 49.231 65 32 1 603 666 219 283 1.33e-11 65.9
Msa0425830 MtrunA17_Chr8g0352871 28.261 138 82 2 55 175 9 146 1.78e-11 63.5
Msa0425830 MtrunA17_Chr1g0149831 43.478 69 34 2 110 177 1 65 4.10e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425830 AT5G24470.1 41.215 461 176 13 40 475 35 425 1.09e-90 293
Msa0425830 AT5G24470.1 68.657 67 11 2 598 658 489 551 1.00e-18 90.5
Msa0425830 AT2G46790.3 72.993 137 37 0 43 179 25 161 1.34e-68 231
Msa0425830 AT2G46790.1 72.993 137 37 0 43 179 25 161 2.74e-68 231
Msa0425830 AT2G46790.1 81.250 48 9 0 616 663 417 464 1.31e-17 86.7
Msa0425830 AT5G60100.7 60.448 134 53 0 43 176 52 185 6.10e-52 185
Msa0425830 AT5G60100.6 60.448 134 53 0 43 176 52 185 6.10e-52 185
Msa0425830 AT5G60100.4 60.448 134 53 0 43 176 52 185 6.10e-52 185
Msa0425830 AT5G60100.5 60.448 134 53 0 43 176 52 185 1.82e-51 186
Msa0425830 AT5G60100.5 69.841 63 18 1 607 669 433 494 3.83e-17 85.5
Msa0425830 AT5G60100.3 60.448 134 53 0 43 176 52 185 1.82e-51 186
Msa0425830 AT5G60100.3 69.841 63 18 1 607 669 433 494 3.83e-17 85.5
Msa0425830 AT5G60100.1 60.448 134 53 0 43 176 52 185 1.82e-51 186
Msa0425830 AT5G60100.1 69.841 63 18 1 607 669 433 494 3.83e-17 85.5
Msa0425830 AT5G60100.2 59.155 142 57 1 43 183 52 193 6.76e-51 185
Msa0425830 AT5G60100.2 69.841 63 18 1 607 669 460 521 5.04e-17 85.1
Msa0425830 AT5G02810.1 49.718 177 79 2 10 176 23 199 1.62e-48 182
Msa0425830 AT5G02810.1 83.721 43 7 0 616 658 669 711 9.08e-16 81.6
Msa0425830 AT5G61380.1 42.958 142 78 1 38 179 5 143 1.81e-29 124
Msa0425830 AT5G61380.1 68.889 45 14 0 616 660 533 577 1.39e-12 71.2
Msa0425830 AT2G25180.1 34.272 213 122 5 55 266 17 212 3.35e-24 107
Msa0425830 AT4G31920.1 40.164 122 68 2 55 175 17 134 1.26e-22 102
Msa0425830 AT3G16857.2 38.095 147 80 4 32 177 20 156 5.60e-22 101
Msa0425830 AT3G16857.1 38.095 147 80 4 32 177 20 156 5.79e-22 101
Msa0425830 AT2G01760.1 40.945 127 69 2 55 179 11 133 5.43e-21 95.9
Msa0425830 AT1G67710.1 38.710 124 71 2 55 177 11 130 2.84e-20 95.1
Msa0425830 AT2G46670.1 81.250 48 9 0 616 663 132 179 5.38e-19 85.9
Msa0425830 AT5G58080.1 34.848 132 80 2 45 176 10 135 2.59e-18 89.7
Msa0425830 AT2G46790.5 81.250 48 9 0 616 663 260 307 3.73e-18 86.3
Msa0425830 AT2G46790.4 81.250 48 9 0 616 663 260 307 3.73e-18 86.3
Msa0425830 AT2G46790.2 81.250 48 9 0 616 663 300 347 8.28e-18 85.9
Msa0425830 AT2G46790.2 80.488 41 8 0 136 176 1 41 4.57e-17 83.6
Msa0425830 AT2G01760.2 37.324 142 73 5 49 179 25 161 4.26e-17 84.7
Msa0425830 AT5G02810.2 83.721 43 7 0 616 658 525 567 6.12e-16 82.0
Msa0425830 AT5G02810.2 54.237 59 23 1 118 176 1 55 2.08e-13 73.9
Msa0425830 AT3G16857.3 40.449 89 48 2 90 177 2 86 2.31e-15 80.1
Msa0425830 AT1G19050.1 30.827 133 83 2 55 178 24 156 8.59e-15 74.3
Msa0425830 AT1G10470.3 31.818 154 89 2 31 175 3 149 1.02e-14 74.7
Msa0425830 AT1G10470.1 31.818 154 89 2 31 175 17 163 1.61e-14 74.7
Msa0425830 AT1G59940.1 32.331 133 81 1 57 180 35 167 2.40e-14 73.6
Msa0425830 AT1G59940.2 32.331 133 81 1 57 180 127 259 7.49e-14 73.6
Msa0425830 AT3G48100.1 33.333 129 75 3 51 169 22 149 2.08e-13 69.7
Msa0425830 AT3G57040.2 28.571 140 81 1 55 175 9 148 2.77e-13 70.5
Msa0425830 AT3G57040.1 28.571 140 81 1 55 175 9 148 2.77e-13 70.5
Msa0425830 AT1G74890.1 30.000 130 82 1 55 175 18 147 4.04e-13 69.3
Msa0425830 AT5G62920.1 29.286 140 90 1 39 169 9 148 4.40e-13 68.6
Msa0425830 AT3G62670.1 28.649 185 110 5 47 227 34 200 5.26e-13 72.0
Msa0425830 AT2G41310.1 30.882 136 77 2 57 175 11 146 8.43e-13 68.9
Msa0425830 AT2G01760.3 47.222 72 32 2 110 179 1 68 1.03e-11 67.0
Msa0425830 AT5G49240.1 34.146 123 76 2 55 176 42 160 1.28e-11 66.6
Msa0425830 AT3G56380.1 28.358 134 86 2 55 178 20 153 1.37e-11 63.5
Msa0425830 AT1G49190.2 28.226 124 84 2 57 179 36 155 1.91e-11 67.8
Msa0425830 AT1G49190.1 28.226 124 84 2 57 179 36 155 2.45e-11 66.6

Find 139 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAATCCCGATTCTCTTTC+TGG 0.070056 3_2:+76247501 Msa0425830:CDS
TCACCCATGTTGTTGTTTAT+TGG 0.145845 3_2:-76244125 None:intergenic
CGCACTTCTCACATTAATTA+TGG 0.184807 3_2:+76245296 Msa0425830:CDS
TACGAACCTCGCGGTCTAAA+TGG 0.244627 3_2:+76246975 Msa0425830:CDS
TCTCTTCCGATTCCTGTAAA+AGG 0.269959 3_2:+76246783 Msa0425830:CDS
GAGCAGCGTCCTCGAGTTAA+AGG 0.270096 3_2:+76247462 Msa0425830:CDS
CAAGAACTTGACATTCATTT+AGG 0.270340 3_2:+76245896 Msa0425830:CDS
TCCAGTAGTATTTGTAATAA+TGG 0.285223 3_2:+76247095 Msa0425830:CDS
GGAATTTGTGGCAGCATGTT+TGG 0.301229 3_2:+76245544 Msa0425830:CDS
GCCGCAACCGCTGGCATAAA+TGG 0.311050 3_2:+76245698 Msa0425830:CDS
TAAAATTACAACTGAATATC+AGG 0.322906 3_2:-76247730 None:intergenic
GCCATTTATGCCAGCGGTTG+CGG 0.331299 3_2:-76245699 None:intergenic
TATACGCTGATTCTTGTCTT+TGG 0.341859 3_2:+76244100 Msa0425830:five_prime_UTR
TGCTGTTGCTGATGGCTTGA+AGG 0.353593 3_2:+76245194 Msa0425830:CDS
TGCTTGCATTCAAAGAAATA+AGG 0.359592 3_2:+76245805 Msa0425830:CDS
AAGGAAGCTATTGACTTGAT+TGG 0.361168 3_2:+76246210 Msa0425830:CDS
ACCAATGCTGGTAAAATTGC+TGG 0.363758 3_2:-76247123 None:intergenic
GTTCCTGTGTATACACAATT+TGG 0.365801 3_2:-76247013 None:intergenic
GTATTGAACTATCTGAGTTA+TGG 0.368410 3_2:-76246707 None:intergenic
GTGTATCACTTTCATCTTGA+GGG 0.373515 3_2:-76245721 None:intergenic
CTTAGAAAATGCAACTATAA+AGG 0.375160 3_2:+76244359 Msa0425830:CDS
TTCGAGGAACACAACTGAAC+CGG 0.382827 3_2:-76246889 None:intergenic
GAGATCCTTCTCAAAGTTGC+TGG 0.389986 3_2:-76246340 None:intergenic
TGTGTATACACAATTTGGTT+TGG 0.392077 3_2:-76247008 None:intergenic
ACAACTGAACCGGGCATTGA+TGG 0.393075 3_2:-76246879 None:intergenic
GATACACTTTGATCAGTTGT+AGG 0.394686 3_2:-76247074 None:intergenic
TCCATTATTACAAATACTAC+TGG 0.397236 3_2:-76247096 None:intergenic
GTTGTTATTAAATATATATC+AGG 0.402264 3_2:-76247708 None:intergenic
AGTAGAGGTGGTGGTGGTGG+TGG 0.403769 3_2:+76244230 Msa0425830:CDS
CAGAACAGCAGCAGTTTCAG+AGG 0.404213 3_2:+76247196 Msa0425830:CDS
GAGAAGGTGAGGGAAGAAGA+AGG 0.408178 3_2:+76244194 Msa0425830:CDS
CTTAGTTCATTTATTCGAAT+CGG 0.408502 3_2:-76245522 None:intergenic
CATAAGGGTGTGCCTTTCTT+CGG 0.412245 3_2:-76246364 None:intergenic
TCAAATTTACTCTACTACTA+AGG 0.413508 3_2:+76246191 Msa0425830:CDS
GAGAAGTGCGTAGCCGGATA+TGG 0.417405 3_2:-76245283 None:intergenic
TGTCCTGCGCGATCACTGCC+TGG 0.417920 3_2:-76245919 None:intergenic
TTAGCAAATATGTGACTTAG+TGG 0.423094 3_2:+76247557 Msa0425830:three_prime_UTR
AGCGTATAGCATCAGAATCT+TGG 0.428632 3_2:-76244085 None:intergenic
CTGAAGCATTGGAATGCATA+AGG 0.429243 3_2:-76246380 None:intergenic
AATGATCTTTGTATGGCCTA+TGG 0.430478 3_2:+76246816 Msa0425830:CDS
GTCGATTTGCCAGCCATATC+CGG 0.434584 3_2:+76245270 Msa0425830:CDS
CGATTCCTGTAAAAGGTGTA+AGG 0.438701 3_2:+76246790 Msa0425830:CDS
CCAGAAAGAGAATCGGGATT+CGG 0.439697 3_2:-76247501 None:intergenic
TTCAATATCATACTTATGAC+AGG 0.442500 3_2:-76245342 None:intergenic
TCTTGTGTCTTTATTTCACT+TGG 0.446311 3_2:-76245878 None:intergenic
GCAGTTGCTGCTGTTGCTGA+TGG 0.454486 3_2:+76245186 Msa0425830:intron
AGAGAGATGTTATGAAAAGA+AGG 0.455803 3_2:+76247307 Msa0425830:CDS
CCAGGGTTTCGTACACAATC+AGG 0.457218 3_2:+76246852 Msa0425830:CDS
AATAAGGACTTAATTGAGAA+AGG 0.462433 3_2:+76245821 Msa0425830:CDS
AAGGTTAAATGATCTTTGTA+TGG 0.462879 3_2:+76246809 Msa0425830:CDS
CAGCAGTCAGCCGCAACCGC+TGG 0.465375 3_2:+76245689 Msa0425830:intron
GTGAAATGAAAGGGCTTATG+AGG 0.465706 3_2:+76244252 Msa0425830:CDS
GTTTGACCATTCTCCACAGT+TGG 0.467281 3_2:+76246293 Msa0425830:CDS
TTGCTGATGGCTTGAAGGCA+TGG 0.467739 3_2:+76245199 Msa0425830:CDS
GAGAGTAGAGGTGGTGGTGG+TGG 0.470267 3_2:+76244227 Msa0425830:CDS
ATTCATGCAGGTATACAAAC+AGG 0.476773 3_2:+76246610 Msa0425830:intron
TAAATGAACTAAGGAATTTG+TGG 0.487302 3_2:+76245532 Msa0425830:CDS
ATACACTTTGATCAGTTGTA+GGG 0.491753 3_2:-76247073 None:intergenic
GAGAAGTTAATTACTACTGC+AGG 0.495962 3_2:-76246648 None:intergenic
AGTGGAAGAAGAAGAAGAGA+AGG 0.496753 3_2:+76244178 Msa0425830:CDS
TGCTGATGGCTTGAAGGCAT+GGG 0.496945 3_2:+76245200 Msa0425830:CDS
AATTCATCAATTGATTGCAC+AGG 0.498212 3_2:+76246267 Msa0425830:CDS
CCGTTTGAAAGCTGAAGCAT+TGG 0.498244 3_2:-76246391 None:intergenic
TAATGTGAGAAGTGCGTAGC+CGG 0.502440 3_2:-76245289 None:intergenic
AGAAGGTGAGGGAAGAAGAA+GGG 0.503650 3_2:+76244195 Msa0425830:CDS
GTGAGGGAAGAAGAAGGGAG+TGG 0.503857 3_2:+76244200 Msa0425830:CDS
GGTGGTGGTGGTGAAATGAA+AGG 0.504614 3_2:+76244242 Msa0425830:CDS
TGGTGAGAAAATAGTGAGAG+TGG 0.512691 3_2:+76244160 Msa0425830:CDS
CCAATGCTTCAGCTTTCAAA+CGG 0.514454 3_2:+76246391 Msa0425830:CDS
GGAACACAAGTCAGAACATC+CGG 0.514906 3_2:+76247031 Msa0425830:CDS
ATTACTTCCATAACCAATGC+TGG 0.523079 3_2:-76247135 None:intergenic
AATGAAAGGGCTTATGAGGT+GGG 0.528311 3_2:+76244256 Msa0425830:CDS
TGAAGCATTGGAATGCATAA+GGG 0.528347 3_2:-76246379 None:intergenic
TGTGTATCACTTTCATCTTG+AGG 0.529215 3_2:-76245722 None:intergenic
GAGATAAGTCTTTGATCCTC+CGG 0.529482 3_2:-76247050 None:intergenic
AGTGCGTAGCCGGATATGGC+TGG 0.534736 3_2:-76245279 None:intergenic
AAAGATCCAACTGTGGAGAA+TGG 0.536900 3_2:-76246299 None:intergenic
TGGTGGAAGTGTTGAACCAT+AGG 0.536921 3_2:-76246832 None:intergenic
TTCTGATATTTAAGAAGTCA+AGG 0.543301 3_2:-76247627 None:intergenic
GTGGTGGTGGTGAAATGAAA+GGG 0.545693 3_2:+76244243 Msa0425830:CDS
AGTGGAACTGAGAGTAGAGG+TGG 0.546233 3_2:+76244218 Msa0425830:CDS
ATTCACATCGAGCTATGCTA+CGG 0.546537 3_2:+76247249 Msa0425830:CDS
CACAGCATATACAGATCAAG+TGG 0.548302 3_2:-76247650 None:intergenic
AGAAGGATCTCACCGAAGAA+AGG 0.548442 3_2:+76246352 Msa0425830:CDS
AGATCCTTCTCAAAGTTGCT+GGG 0.549454 3_2:-76246339 None:intergenic
GGGAGTGGAACTGAGAGTAG+AGG 0.550599 3_2:+76244215 Msa0425830:CDS
AAGAAGAAGAAGAGAAGGTG+AGG 0.553208 3_2:+76244183 Msa0425830:CDS
ACTGAGAGTAGAGGTGGTGG+TGG 0.553345 3_2:+76244224 Msa0425830:CDS
AACGCTGCTAGTAATCGTTC+CGG 0.555367 3_2:+76245773 Msa0425830:CDS
TTTAGGAATGCTAGCATCAG+TGG 0.555975 3_2:+76246144 Msa0425830:CDS
AGAAGAAGAAGAGAAGGTGA+GGG 0.557623 3_2:+76244184 Msa0425830:CDS
CGATTCGAATAAATGAACTA+AGG 0.559225 3_2:+76245523 Msa0425830:CDS
AAATGAAAGGGCTTATGAGG+TGG 0.560859 3_2:+76244255 Msa0425830:CDS
TCGAGGAACACAACTGAACC+GGG 0.562948 3_2:-76246888 None:intergenic
ACTTGACATTCATTTAGGCC+AGG 0.566880 3_2:+76245901 Msa0425830:CDS
AGAACAGCAGCAGTTTCAGA+GGG 0.568196 3_2:+76247197 Msa0425830:CDS
CAACTTCACATTCTCAGCAA+GGG 0.576831 3_2:+76246757 Msa0425830:CDS
GGAACTGAGAGTAGAGGTGG+TGG 0.580734 3_2:+76244221 Msa0425830:CDS
GCAACTTCACATTCTCAGCA+AGG 0.583947 3_2:+76246756 Msa0425830:CDS
GGATCCAATAAACAACAACA+TGG 0.585441 3_2:+76244121 Msa0425830:exon
TCAGGTCCACCATCAATGCC+CGG 0.589208 3_2:+76246870 Msa0425830:CDS
AGCGCAAATAATTGCAAGGA+CGG 0.590278 3_2:+76246105 Msa0425830:CDS
TCATCCCAGCAACTTTGAGA+AGG 0.593867 3_2:+76246335 Msa0425830:CDS
ACTGAACCGGGCATTGATGG+TGG 0.596008 3_2:-76246876 None:intergenic
ATTGGTTATGGAAGTAATTG+CGG 0.597392 3_2:+76247140 Msa0425830:CDS
TTCACATCGAGCTATGCTAC+GGG 0.598642 3_2:+76247250 Msa0425830:CDS
AAAGAGAATCGGGATTCGGT+TGG 0.599964 3_2:-76247497 None:intergenic
TATGGTTCAACACTTCCACC+AGG 0.607254 3_2:+76246834 Msa0425830:CDS
GACAAGCGCAAATAATTGCA+AGG 0.612224 3_2:+76246101 Msa0425830:CDS
GGAAGTAATTGCGGAAGTAG+CGG 0.613525 3_2:+76247149 Msa0425830:CDS
AATGCAAGCAGCATCACCGC+CGG 0.616301 3_2:-76245792 None:intergenic
ACAAATTGTCCTTTAACTCG+AGG 0.617609 3_2:-76247471 None:intergenic
TTGAGGGCCATTTATGCCAG+CGG 0.618633 3_2:-76245705 None:intergenic
ATCGCGCAGGACAGTCACGC+CGG 0.618782 3_2:+76245929 Msa0425830:CDS
AATAAACAACAACATGGGTG+AGG 0.620435 3_2:+76244127 Msa0425830:exon
TATATCAGGATCTAGAGGAA+AGG 0.621980 3_2:-76247694 None:intergenic
AAATATATATCAGGATCTAG+AGG 0.622685 3_2:-76247699 None:intergenic
CCTGATTGTGTACGAAACCC+TGG 0.626598 3_2:-76246852 None:intergenic
AAGGCATGGGAAATACTCAA+AGG 0.628269 3_2:+76245213 Msa0425830:CDS
TACACTTTGATCAGTTGTAG+GGG 0.630188 3_2:-76247072 None:intergenic
AATGAAGAACTCACAAACAG+TGG 0.636681 3_2:+76247224 Msa0425830:CDS
AAACCAAATTGTGTATACAC+AGG 0.639133 3_2:+76247010 Msa0425830:CDS
GAATGCTAGCATCAGTGGTG+AGG 0.644176 3_2:+76246149 Msa0425830:CDS
GATCCAATAAACAACAACAT+GGG 0.646005 3_2:+76244122 Msa0425830:exon
AGGCCAGGCAGTGATCGCGC+AGG 0.648174 3_2:+76245916 Msa0425830:CDS
GTTTGGAGAAGACAATCAGT+AGG 0.659439 3_2:+76245561 Msa0425830:CDS
GTATACAAATGCATGTTGAG+AGG 0.663604 3_2:+76245477 Msa0425830:CDS
CTGTTTCCATTTAGACCGCG+AGG 0.673170 3_2:-76246981 None:intergenic
ATGGTTCAACACTTCCACCA+GGG 0.675718 3_2:+76246835 Msa0425830:CDS
GCGCAGGACAGTCACGCCGG+AGG 0.678639 3_2:+76245932 Msa0425830:CDS
AAATATGTGACTTAGTGGAG+AGG 0.678737 3_2:+76247562 Msa0425830:three_prime_UTR
GCTGCTAGTAATCGTTCCGG+CGG 0.691660 3_2:+76245776 Msa0425830:CDS
TCAATATCATACTTATGACA+GGG 0.693313 3_2:-76245341 None:intergenic
ATGGGTGAGGTTGTAATGAG+TGG 0.695889 3_2:+76244140 Msa0425830:CDS
CTGAGAGAAAGATCCAACTG+TGG 0.713368 3_2:-76246306 None:intergenic
GAGCAGCTTTACGAACCTCG+CGG 0.732658 3_2:+76246966 Msa0425830:CDS
ACACAAGTCAGAACATCCGG+AGG 0.742561 3_2:+76247034 Msa0425830:CDS
GATTGTGTACGAAACCCTGG+TGG 0.767923 3_2:-76246849 None:intergenic
AGTATCAGATCAATACTGCG+CGG 0.783873 3_2:-76245240 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTACAATTTTTTTTTTTT+TGG + chr3_2:76244556-76244575 Msa0425830:intron 10.0%
!! TAATAATTACAAAAATTAAG+GGG + chr3_2:76244782-76244801 Msa0425830:intron 10.0%
!! TCAATAATATAAAATCTTTA+TGG - chr3_2:76245061-76245080 None:intergenic 10.0%
!! TAAGAATTTATTAACAAAAT+TGG + chr3_2:76245634-76245653 Msa0425830:intron 10.0%
!! AAGAATTTATTAACAAAATT+GGG + chr3_2:76245635-76245654 Msa0425830:intron 10.0%
!!! TTGAGTTATTTTTTTTATCT+TGG + chr3_2:76245077-76245096 Msa0425830:intron 15.0%
!!! TTGAACAAACTTTTATTTTT+AGG + chr3_2:76246018-76246037 Msa0425830:intron 15.0%
!! CGAAAAAATTAGAATAAAAA+GGG - chr3_2:76246429-76246448 None:intergenic 15.0%
!! ACGAAAAAATTAGAATAAAA+AGG - chr3_2:76246430-76246449 None:intergenic 15.0%
!!! GTTAAAAAGTATAAATAAGT+TGG - chr3_2:76247410-76247429 None:intergenic 15.0%
!!! ACTTATTTATACTTTTTAAC+AGG + chr3_2:76247410-76247429 Msa0425830:intron 15.0%
!!! GTTGTTATTAAATATATATC+AGG - chr3_2:76247711-76247730 None:intergenic 15.0%
!! GTAAATATTAGGTTATATTG+AGG + chr3_2:76244602-76244621 Msa0425830:intron 20.0%
!! ATTAGAAATTTAGAAGTCTT+TGG + chr3_2:76244694-76244713 Msa0425830:intron 20.0%
!! TAAAATTACAACTGAATATC+AGG - chr3_2:76247733-76247752 None:intergenic 20.0%
! CTTAGAAAATGCAACTATAA+AGG + chr3_2:76244359-76244378 Msa0425830:CDS 25.0%
! AATATTGCTGTGTGTTTAAT+TGG + chr3_2:76244434-76244453 Msa0425830:intron 25.0%
! AATTACAAAAATTAAGGGGA+TGG + chr3_2:76244786-76244805 Msa0425830:intron 25.0%
!!! TTTTTTAAAGAGAAGTGACA+GGG + chr3_2:76244910-76244929 Msa0425830:intron 25.0%
!! ATTTTGTTGCTGAAAATCTT+AGG + chr3_2:76244933-76244952 Msa0425830:intron 25.0%
! CTGAAAATCTTAGGAATTTA+TGG + chr3_2:76244942-76244961 Msa0425830:intron 25.0%
! TGCTATAAGACTCTATTTAA+AGG - chr3_2:76244970-76244989 None:intergenic 25.0%
! GAATAATTGTACCAAGTTTA+TGG - chr3_2:76245015-76245034 None:intergenic 25.0%
! TCAATATCATACTTATGACA+GGG - chr3_2:76245344-76245363 None:intergenic 25.0%
! TTCAATATCATACTTATGAC+AGG - chr3_2:76245345-76245364 None:intergenic 25.0%
! CTTAGTTCATTTATTCGAAT+CGG - chr3_2:76245525-76245544 None:intergenic 25.0%
! TAAATGAACTAAGGAATTTG+TGG + chr3_2:76245532-76245551 Msa0425830:CDS 25.0%
! AATAAGGACTTAATTGAGAA+AGG + chr3_2:76245821-76245840 Msa0425830:CDS 25.0%
!!! TTTATTTTTAGGATTAAGCG+TGG + chr3_2:76246029-76246048 Msa0425830:intron 25.0%
! AGCACAAATAACTGTAAAAA+TGG + chr3_2:76246075-76246094 Msa0425830:CDS 25.0%
! TCAAATTTACTCTACTACTA+AGG + chr3_2:76246191-76246210 Msa0425830:CDS 25.0%
! AAGAACTTCAAAACATGATA+CGG + chr3_2:76246493-76246512 Msa0425830:intron 25.0%
! AAGGTTAAATGATCTTTGTA+TGG + chr3_2:76246809-76246828 Msa0425830:CDS 25.0%
! TCCAGTAGTATTTGTAATAA+TGG + chr3_2:76247095-76247114 Msa0425830:CDS 25.0%
! TCCATTATTACAAATACTAC+TGG - chr3_2:76247099-76247118 None:intergenic 25.0%
! TTCTGATATTTAAGAAGTCA+AGG - chr3_2:76247630-76247649 None:intergenic 25.0%
! AAATATATATCAGGATCTAG+AGG - chr3_2:76247702-76247721 None:intergenic 25.0%
GATCCAATAAACAACAACAT+GGG + chr3_2:76244122-76244141 Msa0425830:exon 30.0%
!!! GTTTTTTAAAGAGAAGTGAC+AGG + chr3_2:76244909-76244928 Msa0425830:intron 30.0%
ATAGCAGTATGACAATTACT+AGG + chr3_2:76244984-76245003 Msa0425830:intron 30.0%
CGATTCGAATAAATGAACTA+AGG + chr3_2:76245523-76245542 Msa0425830:CDS 30.0%
TGCTTGCATTCAAAGAAATA+AGG + chr3_2:76245805-76245824 Msa0425830:CDS 30.0%
! TCTTGTGTCTTTATTTCACT+TGG - chr3_2:76245881-76245900 None:intergenic 30.0%
CAAGAACTTGACATTCATTT+AGG + chr3_2:76245896-76245915 Msa0425830:CDS 30.0%
GAAAGAAAGAAATTTACCTC+CGG - chr3_2:76245951-76245970 None:intergenic 30.0%
!!! GAATTTTTGAGACTGCAATT+CGG - chr3_2:76246252-76246271 None:intergenic 30.0%
AATTCATCAATTGATTGCAC+AGG + chr3_2:76246267-76246286 Msa0425830:CDS 30.0%
! GTGTATGATTTTTATGCTTG+TGG + chr3_2:76246529-76246548 Msa0425830:intron 30.0%
GTATTGAACTATCTGAGTTA+TGG - chr3_2:76246710-76246729 None:intergenic 30.0%
! TCAGATTCTTTTTGCATACT+TGG - chr3_2:76246732-76246751 None:intergenic 30.0%
! TTTAACCTTACACCTTTTAC+AGG - chr3_2:76246798-76246817 None:intergenic 30.0%
TGTGTATACACAATTTGGTT+TGG - chr3_2:76247011-76247030 None:intergenic 30.0%
AAACCAAATTGTGTATACAC+AGG + chr3_2:76247010-76247029 Msa0425830:CDS 30.0%
ATACACTTTGATCAGTTGTA+GGG - chr3_2:76247076-76247095 None:intergenic 30.0%
!!! AATTTTACCAGCATTGGTTA+TGG + chr3_2:76247128-76247147 Msa0425830:CDS 30.0%
ATTGGTTATGGAAGTAATTG+CGG + chr3_2:76247140-76247159 Msa0425830:CDS 30.0%
! ATCTCTCTTTTCGTTTCAAA+CGG - chr3_2:76247295-76247314 None:intergenic 30.0%
AGAGAGATGTTATGAAAAGA+AGG + chr3_2:76247307-76247326 Msa0425830:CDS 30.0%
! TTTTTCTCCAGAAAGAGAAT+CGG - chr3_2:76247511-76247530 None:intergenic 30.0%
TTAGCAAATATGTGACTTAG+TGG + chr3_2:76247557-76247576 Msa0425830:three_prime_UTR 30.0%
GGAAAGGCAAAAAAGAAAAA+TGG - chr3_2:76247681-76247700 None:intergenic 30.0%
!! TATACGCTGATTCTTGTCTT+TGG + chr3_2:76244100-76244119 Msa0425830:five_prime_UTR 35.0%
GGATCCAATAAACAACAACA+TGG + chr3_2:76244121-76244140 Msa0425830:exon 35.0%
!! TCACCCATGTTGTTGTTTAT+TGG - chr3_2:76244128-76244147 None:intergenic 35.0%
AATAAACAACAACATGGGTG+AGG + chr3_2:76244127-76244146 Msa0425830:exon 35.0%
GGAGAAATTCTTGCCAAAAA+TGG + chr3_2:76244277-76244296 Msa0425830:CDS 35.0%
!! TCTTGCCAAAAATGGTTTTG+AGG + chr3_2:76244285-76244304 Msa0425830:CDS 35.0%
!!! CTTGCCAAAAATGGTTTTGA+GGG + chr3_2:76244286-76244305 Msa0425830:CDS 35.0%
! AGTCTTTGGACTGCAAATTT+TGG + chr3_2:76244708-76244727 Msa0425830:intron 35.0%
!! TTGGACTGCAAATTTTGGAA+AGG + chr3_2:76244713-76244732 Msa0425830:intron 35.0%
!! GCAAATTTTGGAAAGGATCA+AGG + chr3_2:76244720-76244739 Msa0425830:intron 35.0%
ACTAGGTTAAGCCATAAACT+TGG + chr3_2:76245001-76245020 Msa0425830:intron 35.0%
CGCACTTCTCACATTAATTA+TGG + chr3_2:76245296-76245315 Msa0425830:CDS 35.0%
GTATACAAATGCATGTTGAG+AGG + chr3_2:76245477-76245496 Msa0425830:CDS 35.0%
GTGTATCACTTTCATCTTGA+GGG - chr3_2:76245724-76245743 None:intergenic 35.0%
TGTGTATCACTTTCATCTTG+AGG - chr3_2:76245725-76245744 None:intergenic 35.0%
!! AAGGAAGCTATTGACTTGAT+TGG + chr3_2:76246210-76246229 Msa0425830:CDS 35.0%
!! TGAAGCATTGGAATGCATAA+GGG - chr3_2:76246382-76246401 None:intergenic 35.0%
TGTTTGTATACCTGCATGAA+TGG - chr3_2:76246611-76246630 None:intergenic 35.0%
ATTCATGCAGGTATACAAAC+AGG + chr3_2:76246610-76246629 Msa0425830:intron 35.0%
GAGAAGTTAATTACTACTGC+AGG - chr3_2:76246651-76246670 None:intergenic 35.0%
! CTTACACCTTTTACAGGAAT+CGG - chr3_2:76246792-76246811 None:intergenic 35.0%
AATGATCTTTGTATGGCCTA+TGG + chr3_2:76246816-76246835 Msa0425830:CDS 35.0%
GTTCCTGTGTATACACAATT+TGG - chr3_2:76247016-76247035 None:intergenic 35.0%
TACACTTTGATCAGTTGTAG+GGG - chr3_2:76247075-76247094 None:intergenic 35.0%
GATACACTTTGATCAGTTGT+AGG - chr3_2:76247077-76247096 None:intergenic 35.0%
ATTACTTCCATAACCAATGC+TGG - chr3_2:76247138-76247157 None:intergenic 35.0%
AATGAAGAACTCACAAACAG+TGG + chr3_2:76247224-76247243 Msa0425830:CDS 35.0%
ACAAATTGTCCTTTAACTCG+AGG - chr3_2:76247474-76247493 None:intergenic 35.0%
! TTTTCTCCAGAAAGAGAATC+GGG - chr3_2:76247510-76247529 None:intergenic 35.0%
AAATATGTGACTTAGTGGAG+AGG + chr3_2:76247562-76247581 Msa0425830:three_prime_UTR 35.0%
TATATCAGGATCTAGAGGAA+AGG - chr3_2:76247697-76247716 None:intergenic 35.0%
AGCGTATAGCATCAGAATCT+TGG - chr3_2:76244088-76244107 None:intergenic 40.0%
TGGTGAGAAAATAGTGAGAG+TGG + chr3_2:76244160-76244179 Msa0425830:CDS 40.0%
AGTGGAAGAAGAAGAAGAGA+AGG + chr3_2:76244178-76244197 Msa0425830:CDS 40.0%
AAGAAGAAGAAGAGAAGGTG+AGG + chr3_2:76244183-76244202 Msa0425830:CDS 40.0%
AGAAGAAGAAGAGAAGGTGA+GGG + chr3_2:76244184-76244203 Msa0425830:CDS 40.0%
GTGAAATGAAAGGGCTTATG+AGG + chr3_2:76244252-76244271 Msa0425830:CDS 40.0%
AAATGAAAGGGCTTATGAGG+TGG + chr3_2:76244255-76244274 Msa0425830:CDS 40.0%
AATGAAAGGGCTTATGAGGT+GGG + chr3_2:76244256-76244275 Msa0425830:CDS 40.0%
! AGCACCCTCAAAACCATTTT+TGG - chr3_2:76244293-76244312 None:intergenic 40.0%
!!! AATGGTTTTGAGGGTGCTTT+TGG + chr3_2:76244295-76244314 Msa0425830:CDS 40.0%
AAGGCATGGGAAATACTCAA+AGG + chr3_2:76245213-76245232 Msa0425830:CDS 40.0%
AGTATCAGATCAATACTGCG+CGG - chr3_2:76245243-76245262 None:intergenic 40.0%
GTTTGGAGAAGACAATCAGT+AGG + chr3_2:76245561-76245580 Msa0425830:CDS 40.0%
ACTTGACATTCATTTAGGCC+AGG + chr3_2:76245901-76245920 Msa0425830:CDS 40.0%
!! ATCATTTTGTTCGACTCGCA+AGG + chr3_2:76245979-76245998 Msa0425830:intron 40.0%
GACAAGCGCAAATAATTGCA+AGG + chr3_2:76246101-76246120 Msa0425830:CDS 40.0%
AGCGCAAATAATTGCAAGGA+CGG + chr3_2:76246105-76246124 Msa0425830:CDS 40.0%
!!! GCGATGATCAAGAGCATTTT+AGG + chr3_2:76246127-76246146 Msa0425830:CDS 40.0%
TTTAGGAATGCTAGCATCAG+TGG + chr3_2:76246144-76246163 Msa0425830:CDS 40.0%
AAAGATCCAACTGTGGAGAA+TGG - chr3_2:76246302-76246321 None:intergenic 40.0%
AGATCCTTCTCAAAGTTGCT+GGG - chr3_2:76246342-76246361 None:intergenic 40.0%
!! CTGAAGCATTGGAATGCATA+AGG - chr3_2:76246383-76246402 None:intergenic 40.0%
CCAATGCTTCAGCTTTCAAA+CGG + chr3_2:76246391-76246410 Msa0425830:CDS 40.0%
GCATGCAGAATTCAACAAAG+CGG - chr3_2:76246569-76246588 None:intergenic 40.0%
CTGCATGCTTATCACTGAAA+TGG + chr3_2:76246581-76246600 Msa0425830:intron 40.0%
AAATGGTGTTCCATTCATGC+AGG + chr3_2:76246598-76246617 Msa0425830:intron 40.0%
CAACTTCACATTCTCAGCAA+GGG + chr3_2:76246757-76246776 Msa0425830:CDS 40.0%
TCTCTTCCGATTCCTGTAAA+AGG + chr3_2:76246783-76246802 Msa0425830:CDS 40.0%
! CGATTCCTGTAAAAGGTGTA+AGG + chr3_2:76246790-76246809 Msa0425830:CDS 40.0%
!!! CTGCTTGAAAGTTTTGTTCG+AGG - chr3_2:76246908-76246927 None:intergenic 40.0%
GAGATAAGTCTTTGATCCTC+CGG - chr3_2:76247053-76247072 None:intergenic 40.0%
ACCAATGCTGGTAAAATTGC+TGG - chr3_2:76247126-76247145 None:intergenic 40.0%
ATTCACATCGAGCTATGCTA+CGG + chr3_2:76247249-76247268 Msa0425830:CDS 40.0%
CACAGCATATACAGATCAAG+TGG - chr3_2:76247653-76247672 None:intergenic 40.0%
ATGGGTGAGGTTGTAATGAG+TGG + chr3_2:76244140-76244159 Msa0425830:CDS 45.0%
AGAAGGTGAGGGAAGAAGAA+GGG + chr3_2:76244195-76244214 Msa0425830:CDS 45.0%
!! GTGGTGGTGGTGAAATGAAA+GGG + chr3_2:76244243-76244262 Msa0425830:CDS 45.0%
TTGGAAAGGATCAAGGCTCA+AGG + chr3_2:76244727-76244746 Msa0425830:intron 45.0%
TGGAAAGGATCAAGGCTCAA+GGG + chr3_2:76244728-76244747 Msa0425830:intron 45.0%
! TAATGTGAGAAGTGCGTAGC+CGG - chr3_2:76245292-76245311 None:intergenic 45.0%
GGAATTTGTGGCAGCATGTT+TGG + chr3_2:76245544-76245563 Msa0425830:CDS 45.0%
AACGCTGCTAGTAATCGTTC+CGG + chr3_2:76245773-76245792 Msa0425830:CDS 45.0%
AGCGTGGCTAACTGCAAAAA+TGG + chr3_2:76246045-76246064 Msa0425830:CDS 45.0%
GGCTAACTGCAAAAATGGAG+TGG + chr3_2:76246050-76246069 Msa0425830:CDS 45.0%
GTTTGACCATTCTCCACAGT+TGG + chr3_2:76246293-76246312 Msa0425830:CDS 45.0%
CTGAGAGAAAGATCCAACTG+TGG - chr3_2:76246309-76246328 None:intergenic 45.0%
! TCATCCCAGCAACTTTGAGA+AGG + chr3_2:76246335-76246354 Msa0425830:CDS 45.0%
GAGATCCTTCTCAAAGTTGC+TGG - chr3_2:76246343-76246362 None:intergenic 45.0%
AGAAGGATCTCACCGAAGAA+AGG + chr3_2:76246352-76246371 Msa0425830:CDS 45.0%
! CATAAGGGTGTGCCTTTCTT+CGG - chr3_2:76246367-76246386 None:intergenic 45.0%
CCGTTTGAAAGCTGAAGCAT+TGG - chr3_2:76246394-76246413 None:intergenic 45.0%
GCAACTTCACATTCTCAGCA+AGG + chr3_2:76246756-76246775 Msa0425830:CDS 45.0%
!! TGGTGGAAGTGTTGAACCAT+AGG - chr3_2:76246835-76246854 None:intergenic 45.0%
TATGGTTCAACACTTCCACC+AGG + chr3_2:76246834-76246853 Msa0425830:CDS 45.0%
ATGGTTCAACACTTCCACCA+GGG + chr3_2:76246835-76246854 Msa0425830:CDS 45.0%
TTCGAGGAACACAACTGAAC+CGG - chr3_2:76246892-76246911 None:intergenic 45.0%
GGAACACAAGTCAGAACATC+CGG + chr3_2:76247031-76247050 Msa0425830:CDS 45.0%
! GCCAGCAATTTTACCAGCAT+TGG + chr3_2:76247122-76247141 Msa0425830:CDS 45.0%
GGAAGTAATTGCGGAAGTAG+CGG + chr3_2:76247149-76247168 Msa0425830:CDS 45.0%
AGAACAGCAGCAGTTTCAGA+GGG + chr3_2:76247197-76247216 Msa0425830:CDS 45.0%
TTCACATCGAGCTATGCTAC+GGG + chr3_2:76247250-76247269 Msa0425830:CDS 45.0%
! AAAGAGAATCGGGATTCGGT+TGG - chr3_2:76247500-76247519 None:intergenic 45.0%
CCAGAAAGAGAATCGGGATT+CGG - chr3_2:76247504-76247523 None:intergenic 45.0%
!! TTTAATTAATTGTAAATATT+AGG + chr3_2:76244591-76244610 Msa0425830:intron 5.0%
!! TTTAATAATTACAAAAATTA+AGG + chr3_2:76244780-76244799 Msa0425830:intron 5.0%
!! TTAATAATTACAAAAATTAA+GGG + chr3_2:76244781-76244800 Msa0425830:intron 5.0%
!! AATTAATTTAAGTATTAATA+AGG - chr3_2:76245400-76245419 None:intergenic 5.0%
GAGAAGGTGAGGGAAGAAGA+AGG + chr3_2:76244194-76244213 Msa0425830:CDS 50.0%
AGTGGAACTGAGAGTAGAGG+TGG + chr3_2:76244218-76244237 Msa0425830:CDS 50.0%
!! GGTGGTGGTGGTGAAATGAA+AGG + chr3_2:76244242-76244261 Msa0425830:CDS 50.0%
TGCTGTTGCTGATGGCTTGA+AGG + chr3_2:76245194-76245213 Msa0425830:CDS 50.0%
TTGCTGATGGCTTGAAGGCA+TGG + chr3_2:76245199-76245218 Msa0425830:CDS 50.0%
! TGCTGATGGCTTGAAGGCAT+GGG + chr3_2:76245200-76245219 Msa0425830:CDS 50.0%
!! GTCGATTTGCCAGCCATATC+CGG + chr3_2:76245270-76245289 Msa0425830:CDS 50.0%
GAATCTTGCGACGACATCAC+TGG - chr3_2:76245447-76245466 None:intergenic 50.0%
TTGAGGGCCATTTATGCCAG+CGG - chr3_2:76245708-76245727 None:intergenic 50.0%
!! AGCAGCGTTGTTTTCAGCAG+TGG - chr3_2:76245762-76245781 None:intergenic 50.0%
GAATGCTAGCATCAGTGGTG+AGG + chr3_2:76246149-76246168 Msa0425830:CDS 50.0%
GATTGTGTACGAAACCCTGG+TGG - chr3_2:76246852-76246871 None:intergenic 50.0%
CCTGATTGTGTACGAAACCC+TGG - chr3_2:76246855-76246874 None:intergenic 50.0%
CCAGGGTTTCGTACACAATC+AGG + chr3_2:76246852-76246871 Msa0425830:CDS 50.0%
!! ACAACTGAACCGGGCATTGA+TGG - chr3_2:76246882-76246901 None:intergenic 50.0%
TCGAGGAACACAACTGAACC+GGG - chr3_2:76246891-76246910 None:intergenic 50.0%
TACGAACCTCGCGGTCTAAA+TGG + chr3_2:76246975-76246994 Msa0425830:CDS 50.0%
CTGTTTCCATTTAGACCGCG+AGG - chr3_2:76246984-76247003 None:intergenic 50.0%
ACACAAGTCAGAACATCCGG+AGG + chr3_2:76247034-76247053 Msa0425830:CDS 50.0%
CAGAACAGCAGCAGTTTCAG+AGG + chr3_2:76247196-76247215 Msa0425830:CDS 50.0%
CCGAATCCCGATTCTCTTTC+TGG + chr3_2:76247501-76247520 Msa0425830:CDS 50.0%
GTGAGGGAAGAAGAAGGGAG+TGG + chr3_2:76244200-76244219 Msa0425830:CDS 55.0%
GGGAGTGGAACTGAGAGTAG+AGG + chr3_2:76244215-76244234 Msa0425830:CDS 55.0%
GGAACTGAGAGTAGAGGTGG+TGG + chr3_2:76244221-76244240 Msa0425830:CDS 55.0%
! ACTGAGAGTAGAGGTGGTGG+TGG + chr3_2:76244224-76244243 Msa0425830:CDS 55.0%
GCAGTTGCTGCTGTTGCTGA+TGG + chr3_2:76245186-76245205 Msa0425830:intron 55.0%
! GAGAAGTGCGTAGCCGGATA+TGG - chr3_2:76245286-76245305 None:intergenic 55.0%
GCCATTTATGCCAGCGGTTG+CGG - chr3_2:76245702-76245721 None:intergenic 55.0%
GCTGCTAGTAATCGTTCCGG+CGG + chr3_2:76245776-76245795 Msa0425830:CDS 55.0%
AATGCAAGCAGCATCACCGC+CGG - chr3_2:76245795-76245814 None:intergenic 55.0%
TCAGGTCCACCATCAATGCC+CGG + chr3_2:76246870-76246889 Msa0425830:CDS 55.0%
!! ACTGAACCGGGCATTGATGG+TGG - chr3_2:76246879-76246898 None:intergenic 55.0%
GAGCAGCTTTACGAACCTCG+CGG + chr3_2:76246966-76246985 Msa0425830:CDS 55.0%
GAGCAGCGTCCTCGAGTTAA+AGG + chr3_2:76247462-76247481 Msa0425830:CDS 55.0%
!! GAGAGTAGAGGTGGTGGTGG+TGG + chr3_2:76244227-76244246 Msa0425830:CDS 60.0%
!! AGTAGAGGTGGTGGTGGTGG+TGG + chr3_2:76244230-76244249 Msa0425830:CDS 60.0%
AGTGCGTAGCCGGATATGGC+TGG - chr3_2:76245282-76245301 None:intergenic 60.0%
GCCGCAACCGCTGGCATAAA+TGG + chr3_2:76245698-76245717 Msa0425830:CDS 60.0%
TGTCCTGCGCGATCACTGCC+TGG - chr3_2:76245922-76245941 None:intergenic 65.0%
ATCGCGCAGGACAGTCACGC+CGG + chr3_2:76245929-76245948 Msa0425830:CDS 65.0%
CAGCAGTCAGCCGCAACCGC+TGG + chr3_2:76245689-76245708 Msa0425830:intron 70.0%
AGGCCAGGCAGTGATCGCGC+AGG + chr3_2:76245916-76245935 Msa0425830:CDS 70.0%
GCGCAGGACAGTCACGCCGG+AGG + chr3_2:76245932-76245951 Msa0425830:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 76244066 76247774 76244066 ID=Msa0425830;Name=Msa0425830
chr3_2 mRNA 76244066 76247774 76244066 ID=Msa0425830-mRNA-1;Parent=Msa0425830;Name=Msa0425830-mRNA-1;_AED=0.03;_eAED=0.03;_QI=74|0.83|0.71|1|1|1|7|235|670
chr3_2 exon 76244066 76244380 76244066 ID=Msa0425830-mRNA-1:exon:19620;Parent=Msa0425830-mRNA-1
chr3_2 exon 76245190 76245351 76245190 ID=Msa0425830-mRNA-1:exon:19621;Parent=Msa0425830-mRNA-1
chr3_2 exon 76245448 76245605 76245448 ID=Msa0425830-mRNA-1:exon:19622;Parent=Msa0425830-mRNA-1
chr3_2 exon 76245692 76245953 76245692 ID=Msa0425830-mRNA-1:exon:19623;Parent=Msa0425830-mRNA-1
chr3_2 exon 76246040 76246412 76246040 ID=Msa0425830-mRNA-1:exon:19624;Parent=Msa0425830-mRNA-1
chr3_2 exon 76246620 76247328 76246620 ID=Msa0425830-mRNA-1:exon:19625;Parent=Msa0425830-mRNA-1
chr3_2 exon 76247432 76247774 76247432 ID=Msa0425830-mRNA-1:exon:19626;Parent=Msa0425830-mRNA-1
chr3_2 five_prime_UTR 76244066 76244139 76244066 ID=Msa0425830-mRNA-1:five_prime_utr;Parent=Msa0425830-mRNA-1
chr3_2 CDS 76244140 76244380 76244140 ID=Msa0425830-mRNA-1:cds;Parent=Msa0425830-mRNA-1
chr3_2 CDS 76245190 76245351 76245190 ID=Msa0425830-mRNA-1:cds;Parent=Msa0425830-mRNA-1
chr3_2 CDS 76245448 76245605 76245448 ID=Msa0425830-mRNA-1:cds;Parent=Msa0425830-mRNA-1
chr3_2 CDS 76245692 76245953 76245692 ID=Msa0425830-mRNA-1:cds;Parent=Msa0425830-mRNA-1
chr3_2 CDS 76246040 76246412 76246040 ID=Msa0425830-mRNA-1:cds;Parent=Msa0425830-mRNA-1
chr3_2 CDS 76246620 76247328 76246620 ID=Msa0425830-mRNA-1:cds;Parent=Msa0425830-mRNA-1
chr3_2 CDS 76247432 76247539 76247432 ID=Msa0425830-mRNA-1:cds;Parent=Msa0425830-mRNA-1
chr3_2 three_prime_UTR 76247540 76247774 76247540 ID=Msa0425830-mRNA-1:three_prime_utr;Parent=Msa0425830-mRNA-1
Gene Sequence

>Msa0425830

ATGGGTGAGGTTGTAATGAGTGGTGAGAAAATAGTGAGAGTGGAAGAAGAAGAAGAGAAGGTGAGGGAAGAAGAAGGGAGTGGAACTGAGAGTAGAGGTGGTGGTGGTGGTGGTGAAATGAAAGGGCTTATGAGGTGGGAGAAATTCTTGCCAAAAATGGTTTTGAGGGTGCTTTTGGTTGAAGCTGATGATTGTACAAGACAGATTATTACAGCACTTCTTAGAAAATGCAACTATAAAGTTGCTGCTGTTGCTGATGGCTTGAAGGCATGGGAAATACTCAAAGGAAGACCGCGCAGTATTGATCTGATACTTACAGAAGTCGATTTGCCAGCCATATCCGGCTACGCACTTCTCACATTAATTATGGAGCATGATATTTGCAAGAGCATCCCTGTCATAATGATGTCGTCGCAAGATTCAGTTAGCACAGTATACAAATGCATGTTGAGAGGTGCAGCTGACTATCTTGTTAAGCCGATTCGAATAAATGAACTAAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCAGTAGGACTTCTGCTCTCTCAATTTTCACAGTCAGCCGCAACCGCTGGCATAAATGGCCCTCAAGATGAAAGTGATACACAACAGAAGTTTGAAGCCACTGCTGAAAACAACGCTGCTAGTAATCGTTCCGGCGGTGATGCTGCTTGCATTCAAAGAAATAAGGACTTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTGCTGAAGCATATCCAAGTGAAATAAAGACACAAGAACTTGACATTCATTTAGGCCAGGCAGTGATCGCGCAGGACAGTCACGCCGGAGGATTAAGCGTGGCTAACTGCAAAAATGGAGTGGCAAGCACAAATAACTGTAAAAATGGAGAGACAAGCGCAAATAATTGCAAGGACGGCGATGATCAAGAGCATTTTAGGAATGCTAGCATCAGTGGTGAGGTTCATGACAATCACTATGTTCAAATTTACTCTACTACTAAGGAAGCTATTGACTTGATTGGAGCATTTCGTACTGATCCGAATTGCAGTCTCAAAAATTCATCAATTGATTGCACAGGCAAGTTTGACCATTCTCCACAGTTGGATCTTTCTCTCAGAAGCTCTCATCCCAGCAACTTTGAGAAGGATCTCACCGAAGAAAGGCACACCCTTATGCATTCCAATGCTTCAGCTTTCAAACGGTATACAAACAGGCAATTGCAAGCGTCACCTGCAGTAGTAATTAACTTCTCTGATCAACAAAGAGAACAAAAAACAAATAATGAGAACCATAACTCAGATAGTTCAATACCAAGTATGCAAAAAGAATCTGAACTTGCAACTTCACATTCTCAGCAAGGGCATTCTCTTCCGATTCCTGTAAAAGGTGTAAGGTTAAATGATCTTTGTATGGCCTATGGTTCAACACTTCCACCAGGGTTTCGTACACAATCAGGTCCACCATCAATGCCCGGTTCAGTTGTGTTCCTCGAACAAAACTTTCAAGCAGATGCATTTTATCAGTCAAATGTTAAAGAAAATAATTCAGAGCAGCTTTACGAACCTCGCGGTCTAAATGGAAACAGCACTCCAAACCAAATTGTGTATACACAGGAACACAAGTCAGAACATCCGGAGGATCAAAGACTTATCTCCCCTACAACTGATCAAAGTGTATCCAGTAGTATTTGTAATAATGGAAATGCCAGCAATTTTACCAGCATTGGTTATGGAAGTAATTGCGGAAGTAGCGGCAATGTTGAACAAGTTGCAACTTTCAGAACAGCAGCAGTTTCAGAGGGAAAGAATGAAGAACTCACAAACAGTGGATATTCACATCGAGCTATGCTACGGGAAGCAGCTCTAAACAAGTTCCGTTTGAAACGAAAAGAGAGATGTTATGAAAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCTCGAGTTAAAGGACAATTTGTTCGCCAACCGAATCCCGATTCTCTTTCTGGAGAAAAAGATTGCTAA
Protein sequence

>Msa0425830

MGEVVMSGEKIVRVEEEEEKVREEEGSGTESRGGGGGGEMKGLMRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSVGLLLSQFSQSAATAGINGPQDESDTQQKFEATAENNAASNRSGGDAACIQRNKDLIEKGSDAQSSCAEAYPSEIKTQELDIHLGQAVIAQDSHAGGLSVANCKNGVASTNNCKNGETSANNCKDGDDQEHFRNASISGEVHDNHYVQIYSTTKEAIDLIGAFRTDPNCSLKNSSIDCTGKFDHSPQLDLSLRSSHPSNFEKDLTEERHTLMHSNASAFKRYTNRQLQASPAVVINFSDQQREQKTNNENHNSDSSIPSMQKESELATSHSQQGHSLPIPVKGVRLNDLCMAYGSTLPPGFRTQSGPPSMPGSVVFLEQNFQADAFYQSNVKENNSEQLYEPRGLNGNSTPNQIVYTQEHKSEHPEDQRLISPTTDQSVSSSICNNGNASNFTSIGYGSNCGSSGNVEQVATFRTAAVSEGKNEELTNSGYSHRAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQPNPDSLSGEKDC*