AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1138320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 209 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTGTTGAACTTATTTA+TGG 0.053189 7_4:+7734911 Msa1138320:three_prime_UTR
CATTGTACTTGGAGGGATTT+TGG 0.168839 7_4:+7732455 Msa1138320:three_prime_UTR
TCCATCTTCATTAGGCAAAT+TGG 0.174820 7_4:+7733277 Msa1138320:three_prime_UTR
GGTATGAGGTTATATGTTTA+TGG 0.183849 7_4:-7732512 None:intergenic
TTATTGGTCATTGTACTATT+TGG 0.185268 7_4:+7734939 Msa1138320:three_prime_UTR
ATGATGAATACCTCCATTTC+TGG 0.190542 7_4:+7734868 Msa1138320:three_prime_UTR
GACATTTATATCTTCCTAAT+TGG 0.220123 7_4:+7733396 Msa1138320:three_prime_UTR
CCACTTAGGTACTTCAAATT+AGG 0.220995 7_4:-7733833 None:intergenic
TGGAAATTCCAAACATATTA+TGG 0.224027 7_4:+7733357 Msa1138320:three_prime_UTR
TAGTAATAGTTTGCAAATTA+AGG 0.231377 7_4:-7733313 None:intergenic
CTGAACTTCCTTGAAATAAT+AGG 0.238452 7_4:+7735011 Msa1138320:three_prime_UTR
TAACATTTGTTGCTGGTCTA+AGG 0.248096 7_4:+7734038 Msa1138320:three_prime_UTR
AACAAATTTCCAACTTCTTT+AGG 0.256846 7_4:-7733209 None:intergenic
AAAATTACCCACAAAGTTTA+GGG 0.265086 7_4:-7735062 None:intergenic
CGTAAAAGATTTGTTAAAAC+TGG 0.277925 7_4:+7733502 Msa1138320:three_prime_UTR
AGTTTAGTCTTGAATGATTT+AGG 0.280862 7_4:-7734082 None:intergenic
TCAACATCTACCACTTGTTC+AGG 0.292411 7_4:-7733653 None:intergenic
AAGACTAAACTTGGAATTGA+TGG 0.308193 7_4:+7734094 Msa1138320:three_prime_UTR
AAGAAGTTGGAAATTTGTTT+TGG 0.309959 7_4:+7733213 Msa1138320:three_prime_UTR
ATAACCTCATACCTAATAAA+AGG 0.310964 7_4:+7732522 Msa1138320:three_prime_UTR
AATGTTTGTTGGAAAGAAAA+TGG 0.314456 7_4:+7733862 Msa1138320:three_prime_UTR
CCTTTGGCTATCATTGTACT+TGG 0.318010 7_4:+7732444 Msa1138320:three_prime_UTR
CAAATTCTTCCATCTTCATT+AGG 0.325783 7_4:+7733269 Msa1138320:three_prime_UTR
TTTGGTATCTCAAAGTCTTC+AGG 0.327557 7_4:-7732648 None:intergenic
AAAATGGTATGCTCAATAAA+TGG 0.328701 7_4:+7733878 Msa1138320:three_prime_UTR
GGAGGAAATAATTGAGCTTC+TGG 0.331156 7_4:-7733740 None:intergenic
TTTATGATCATGCCTTAGTT+TGG 0.334154 7_4:-7730101 None:intergenic
AATCTCATCCCTCTCCTCTT+TGG 0.335265 7_4:-7730533 None:intergenic
TTAGGCAACAATTGTCCCTT+TGG 0.338449 7_4:-7733191 None:intergenic
TGTCAAATGGTTTATATTTG+TGG 0.348236 7_4:+7730352 Msa1138320:three_prime_UTR
CAATTTGCAAGTCTTTGATT+TGG 0.349156 7_4:-7729907 None:intergenic
AGAGGATGCAATGCTTCTTA+AGG 0.349442 7_4:+7729936 Msa1138320:three_prime_UTR
CTTAGAGTTCTTGATCTTGA+AGG 0.361282 7_4:+7733158 Msa1138320:three_prime_UTR
TTTAACTTCCATAATATGTT+TGG 0.363044 7_4:-7733365 None:intergenic
ATAGCTAGAACTTCAAGTTT+AGG 0.363422 7_4:-7733905 None:intergenic
CAAACATCTCCACACCAATT+AGG 0.364315 7_4:-7733410 None:intergenic
AAACTATTACTAAAGTAAGT+TGG 0.373253 7_4:+7733324 Msa1138320:three_prime_UTR
ATGGTTTATATTTGTGGAAT+GGG 0.374037 7_4:+7730358 Msa1138320:three_prime_UTR
ACCCTCAAAGTGTCGCCTAA+TGG 0.375718 7_4:-7730428 None:intergenic
TTTATCATTATAGTTCCATT+AGG 0.384537 7_4:+7730413 Msa1138320:three_prime_UTR
TGAAAGATTAGGCAGAGATA+TGG 0.385718 7_4:+7732401 Msa1138320:three_prime_UTR
AAAATGTGCTGGGCTGCCTT+TGG 0.386819 7_4:+7732428 Msa1138320:three_prime_UTR
TCATTAATGCTATTATTGTT+TGG 0.393699 7_4:-7732921 None:intergenic
GATCATTCAATACCAACTTT+CGG 0.395782 7_4:-7733532 None:intergenic
GTTGGTCAAATGGGGTCTAC+TGG 0.399180 7_4:+7732801 Msa1138320:three_prime_UTR
CATAGCACAAACAAAGGATA+AGG 0.400468 7_4:+7729196 Msa1138320:CDS
AACTATTACTAAAGTAAGTT+GGG 0.401093 7_4:+7733325 Msa1138320:three_prime_UTR
ATTTGTGGAATGGGCGGTCT+AGG 0.403035 7_4:+7730367 Msa1138320:three_prime_UTR
TGGTTCATGAAGCAAGCCTT+TGG 0.403966 7_4:-7730749 None:intergenic
TTCCATTAGGCGACACTTTG+AGG 0.404936 7_4:+7730426 Msa1138320:three_prime_UTR
ATGGTTCAAGTTGGTCAAAT+GGG 0.406046 7_4:+7732792 Msa1138320:three_prime_UTR
TAGCTTAATTAGTCGTTGTA+TGG 0.408309 7_4:+7732773 Msa1138320:three_prime_UTR
TCTTAAATGCAGAAGATAGT+TGG 0.410767 7_4:+7730776 Msa1138320:three_prime_UTR
TCCAATTTGCCTAATGAAGA+TGG 0.411718 7_4:-7733278 None:intergenic
ATGCAATAGAAGAGAGGTTT+GGG 0.414139 7_4:+7730477 Msa1138320:three_prime_UTR
GATGGACTAACATTTGTTGC+TGG 0.419634 7_4:+7734031 Msa1138320:three_prime_UTR
GAAAGGGAATCAAGATTAGC+TGG 0.422400 7_4:+7732555 Msa1138320:three_prime_UTR
GGGATCTACATGTGATGAAA+TGG 0.424370 7_4:-7730728 None:intergenic
CTAAGGCATGATCATAAAGT+TGG 0.428906 7_4:+7730106 Msa1138320:three_prime_UTR
TTCAGAAGCCTATTATTTCA+AGG 0.429635 7_4:-7735019 None:intergenic
ACTTACCCCACTTAACAAAC+TGG 0.430086 7_4:-7729882 None:intergenic
GTGGTGAGGCTATAAAGAAT+TGG 0.430087 7_4:+7729984 Msa1138320:three_prime_UTR
GAGGATGCAATGCTTCTTAA+GGG 0.431521 7_4:+7729937 Msa1138320:three_prime_UTR
AGATCTCTTGTACATTTCAA+TGG 0.434404 7_4:+7733074 Msa1138320:three_prime_UTR
GGTTCATGAAGCAAGCCTTT+GGG 0.435021 7_4:-7730748 None:intergenic
AACTGGCTTCTTCAATTAAG+AGG 0.436507 7_4:-7729865 None:intergenic
TTGGCTATCATTGTACTTGG+AGG 0.438991 7_4:+7732447 Msa1138320:three_prime_UTR
CAAAAGAAACAATCAATGAA+TGG 0.441079 7_4:+7732481 Msa1138320:three_prime_UTR
TGATCGTCTTGGATGACATC+TGG 0.442157 7_4:+7730620 Msa1138320:three_prime_UTR
TATGGTTCAAGTTGGTCAAA+TGG 0.443445 7_4:+7732791 Msa1138320:three_prime_UTR
AAACAAACACAGACCAGAAA+TGG 0.443914 7_4:-7734881 None:intergenic
TAAGCTCAACTCACTATTCA+AGG 0.444708 7_4:+7729271 Msa1138320:CDS
AAATCATTCAAGACTAAACT+TGG 0.445565 7_4:+7734085 Msa1138320:three_prime_UTR
TCAAATACCAGGTACAATAT+AGG 0.445896 7_4:+7734186 Msa1138320:three_prime_UTR
AAAAGGAGAGGTACTTGAAA+GGG 0.446589 7_4:+7732539 Msa1138320:three_prime_UTR
AATGCAATAGAAGAGAGGTT+TGG 0.450530 7_4:+7730476 Msa1138320:three_prime_UTR
AATGGTTTATATTTGTGGAA+TGG 0.450612 7_4:+7730357 Msa1138320:three_prime_UTR
CTTAAATGCAGAAGATAGTT+GGG 0.451814 7_4:+7730777 Msa1138320:three_prime_UTR
GGTAAGAAATGCAGAGTTCA+AGG 0.456282 7_4:+7733095 Msa1138320:three_prime_UTR
TCCATTAGGCGACACTTTGA+GGG 0.456423 7_4:+7730427 Msa1138320:three_prime_UTR
AATTGGATCCCTAAACTTTG+TGG 0.457127 7_4:+7735054 Msa1138320:three_prime_UTR
CTATCAATTCTCAAATAGTC+GGG 0.458226 7_4:+7730143 Msa1138320:three_prime_UTR
CATCTCGATATGAGATTGAA+AGG 0.459115 7_4:+7732712 Msa1138320:three_prime_UTR
TAAGGGAGTTGGAGATAAGA+TGG 0.459512 7_4:+7734056 Msa1138320:three_prime_UTR
GAAAATGTGTTTGATCGTCT+TGG 0.460719 7_4:+7730609 Msa1138320:three_prime_UTR
AAAGGCTTGCTTCATGAACC+AGG 0.462557 7_4:+7730751 Msa1138320:three_prime_UTR
GCAACAAATGTTAGTCCATC+AGG 0.462813 7_4:-7734028 None:intergenic
GAACATGAGAGATAATGAAT+TGG 0.466324 7_4:+7730558 Msa1138320:three_prime_UTR
AAGAGGAGAGGGATGAGATT+AGG 0.469273 7_4:+7730536 Msa1138320:three_prime_UTR
TCTATCAATTCTCAAATAGT+CGG 0.471668 7_4:+7730142 Msa1138320:three_prime_UTR
CAATTGTTGCCTAAAGAAGT+TGG 0.472323 7_4:+7733200 Msa1138320:three_prime_UTR
TGCAATGAGTTTGAAAGATT+AGG 0.473954 7_4:+7732390 Msa1138320:three_prime_UTR
TTTGATATATAAATATGAAA+GGG 0.475231 7_4:+7729043 None:intergenic
TGGCTATCATTGTACTTGGA+GGG 0.478257 7_4:+7732448 Msa1138320:three_prime_UTR
AGCTTCTCTAATGTTACCAT+TGG 0.479226 7_4:-7733809 None:intergenic
AAAAGAAACAATCAATGAAT+GGG 0.482096 7_4:+7732482 Msa1138320:three_prime_UTR
TCAAGACCAACATTGTCAAA+TGG 0.487683 7_4:+7730339 Msa1138320:three_prime_UTR
TTGTGTCATTTACAATTGAA+AGG 0.487727 7_4:+7729834 Msa1138320:three_prime_UTR
TATAAACCATTTGACAATGT+TGG 0.487941 7_4:-7730345 None:intergenic
AAAATAAATTAATTCAATTG+TGG 0.489766 7_4:+7732670 Msa1138320:three_prime_UTR
ACTGGAAAAGCTCCGAAAGT+TGG 0.492854 7_4:+7733520 Msa1138320:three_prime_UTR
TGTTGCTGGTCTAAGGGAGT+TGG 0.493643 7_4:+7734045 Msa1138320:three_prime_UTR
ACTTGCAAATTGAACTAAAG+AGG 0.493896 7_4:+7729918 Msa1138320:three_prime_UTR
AAGAAGCCAGTTTGTTAAGT+GGG 0.494446 7_4:+7729876 Msa1138320:three_prime_UTR
TAATGCAAAGTTGAAATGCT+TGG 0.495467 7_4:+7733595 Msa1138320:three_prime_UTR
GAGTTAACTGTAGGCTTGGA+TGG 0.496288 7_4:+7730283 Msa1138320:three_prime_UTR
CAAACATTTCCCATCCACTT+AGG 0.496370 7_4:-7733847 None:intergenic
AGTGGATGGGAAATGTTTGT+TGG 0.496844 7_4:+7733851 Msa1138320:three_prime_UTR
ACATCTGGAGCAATGAGACT+TGG 0.497220 7_4:+7730635 Msa1138320:three_prime_UTR
ATTGGATCCCTAAACTTTGT+GGG 0.498354 7_4:+7735055 Msa1138320:three_prime_UTR
GTGTTTGTCAAAGGCTATGA+AGG 0.501019 7_4:+7732866 Msa1138320:three_prime_UTR
ACATTCATCCTGCTTTCTCT+CGG 0.503180 7_4:-7729963 None:intergenic
AATTGGTGTGGAGATGTTTG+TGG 0.504685 7_4:+7733413 Msa1138320:three_prime_UTR
CAACATCTACCACTTGTTCA+GGG 0.506469 7_4:-7733652 None:intergenic
CCTAATTTGAAGTACCTAAG+TGG 0.508587 7_4:+7733833 Msa1138320:three_prime_UTR
AACATTTGTTGCTGGTCTAA+GGG 0.510544 7_4:+7734039 Msa1138320:three_prime_UTR
GGCTATAAAGAATTGGATAT+CGG 0.511883 7_4:+7729991 Msa1138320:three_prime_UTR
ACTAGAAGTTTACAAACGTA+TGG 0.512564 7_4:+7730169 Msa1138320:three_prime_UTR
ATTTGAAGTACCTAAGTGGA+TGG 0.513128 7_4:+7733837 Msa1138320:three_prime_UTR
ATCCCTCTCCTCTTTGGAAG+AGG 0.513469 7_4:-7730527 None:intergenic
TTATATCTTCCTAATTGGTG+TGG 0.520313 7_4:+7733401 Msa1138320:three_prime_UTR
ACATATCACGCATTAAATCA+TGG 0.523613 7_4:-7732845 None:intergenic
TGACTCCTTTCTCCAAACTA+AGG 0.524212 7_4:+7730089 Msa1138320:three_prime_UTR
TCATGCCTTAGTTTGGAGAA+AGG 0.526257 7_4:-7730094 None:intergenic
AGAAATGCAGAGTTCAAGGT+TGG 0.528905 7_4:+7733099 Msa1138320:three_prime_UTR
AAAGGGAATCAAGATTAGCT+GGG 0.529326 7_4:+7732556 Msa1138320:three_prime_UTR
AGTTTGTTAAGTGGGGTAAG+TGG 0.529662 7_4:+7729884 Msa1138320:three_prime_UTR
GATATGGTTGCAAAATGTGC+TGG 0.529992 7_4:+7732417 Msa1138320:three_prime_UTR
AATCTTCTGAAGCGCATGAA+AGG 0.531202 7_4:-7734823 None:intergenic
GATTGAAAGGGATGAAAGAG+TGG 0.533034 7_4:+7732725 Msa1138320:three_prime_UTR
TGATGAGTTAACTGTAGGCT+TGG 0.533095 7_4:+7730279 Msa1138320:three_prime_UTR
GTTGAGCTTAGCGGCGATTG+TGG 0.535260 7_4:-7729258 None:intergenic
ACTGCATGTAGAGGGAAGAA+TGG 0.535646 7_4:+7733709 Msa1138320:three_prime_UTR
GAAGAAGCCAGTTTGTTAAG+TGG 0.536214 7_4:+7729875 Msa1138320:three_prime_UTR
ATCTCGATATGAGATTGAAA+GGG 0.536534 7_4:+7732713 Msa1138320:three_prime_UTR
GCTTAGCGGCGATTGTGGTA+TGG 0.537217 7_4:-7729253 None:intergenic
TTTACGTCACATTTACTGGA+TGG 0.537653 7_4:-7733485 None:intergenic
AGTCGTTGTATGGTTCAAGT+TGG 0.538675 7_4:+7732783 Msa1138320:three_prime_UTR
GAATAGTGAGTTGAGCTTAG+CGG 0.541438 7_4:-7729267 None:intergenic
TCCATAAATAAGTTCAACAA+AGG 0.545200 7_4:-7734912 None:intergenic
TGCAGGATAAATAATGATGA+TGG 0.546034 7_4:+7729802 Msa1138320:intron
TTCAGGGAATGAAAGCAAGT+TGG 0.546621 7_4:-7733636 None:intergenic
ATAGCACAAACAAAGGATAA+GGG 0.547597 7_4:+7729197 Msa1138320:CDS
TACTACTTCCTCTTCCAAAG+AGG 0.549252 7_4:+7730519 Msa1138320:three_prime_UTR
CCATAAATAAGTTCAACAAA+GGG 0.550131 7_4:-7734911 None:intergenic
ATTCAATTGTGGATTGCAGA+AGG 0.551349 7_4:+7732681 Msa1138320:three_prime_UTR
TTCCTCTTCCAAAGAGGAGA+GGG 0.554679 7_4:+7730525 Msa1138320:three_prime_UTR
TTGATATATAAATATGAAAG+GGG 0.557610 7_4:+7729044 None:intergenic
TAAAAGGAGAGGTACTTGAA+AGG 0.559313 7_4:+7732538 Msa1138320:three_prime_UTR
CATCTGGAGCAATGAGACTT+GGG 0.559471 7_4:+7730636 Msa1138320:three_prime_UTR
TAAACTTGTGGAAGATCCAA+TGG 0.561818 7_4:+7733793 Msa1138320:three_prime_UTR
GATGTTGCCGAGCGTTACCT+AGG 0.564568 7_4:+7732750 Msa1138320:three_prime_UTR
TCTTCTGCATTTAAGAACCC+TGG 0.566027 7_4:-7730769 None:intergenic
GCTTTCATTCCCTGAACAAG+TGG 0.572119 7_4:+7733643 Msa1138320:three_prime_UTR
TCATTCACTTGCTTATTAAG+CGG 0.574660 7_4:-7733044 None:intergenic
TGAAAGGGATGAAAGAGTGG+AGG 0.577246 7_4:+7732728 Msa1138320:three_prime_UTR
AAGGGATGCCGAGAGAAAGC+AGG 0.577397 7_4:+7729955 Msa1138320:three_prime_UTR
ACATAAAGAAAGTAGTGGAA+TGG 0.580905 7_4:+7730308 Msa1138320:three_prime_UTR
GTAGCTGATGAGTTAACTGT+AGG 0.586791 7_4:+7730274 Msa1138320:three_prime_UTR
TTATTAGATGCAAGAAACAC+TGG 0.587394 7_4:+7732963 Msa1138320:three_prime_UTR
TGGGAACATAAAGAAAGTAG+TGG 0.588909 7_4:+7730303 Msa1138320:three_prime_UTR
GTTAACTTTGAAAACTGTGG+AGG 0.592532 7_4:-7733758 None:intergenic
AAAGTTAACTTTGAAAACTG+TGG 0.593279 7_4:-7733761 None:intergenic
CTTCTAAATTAGAAAAGCCA+CGG 0.593400 7_4:-7733928 None:intergenic
AAATTCACCTATATTGTACC+TGG 0.596604 7_4:-7734193 None:intergenic
TTTGAAGTACCTAAGTGGAT+GGG 0.600028 7_4:+7733838 Msa1138320:three_prime_UTR
AAAATTAGCTTATGATGCTG+AGG 0.600098 7_4:+7730021 Msa1138320:three_prime_UTR
AGACACAGAGACAATTGAGA+TGG 0.600416 7_4:+7730239 Msa1138320:three_prime_UTR
CGCTTGCATAGCACAAACAA+AGG 0.601210 7_4:+7729190 Msa1138320:CDS
TAAGCTACCTAGGTAACGCT+CGG 0.604884 7_4:-7732757 None:intergenic
CTTCACAAACTGCATGTAGA+GGG 0.605622 7_4:+7733701 Msa1138320:three_prime_UTR
CAATCTACAAAGATGAGGCA+TGG 0.605987 7_4:-7733972 None:intergenic
AGTTAACTGTAGGCTTGGAT+GGG 0.606284 7_4:+7730284 Msa1138320:three_prime_UTR
ACATGCAGTTTGTGAAGTGA+AGG 0.606824 7_4:-7733695 None:intergenic
AAGTTAAAGACTGTTCCTGA+TGG 0.608538 7_4:+7734013 Msa1138320:three_prime_UTR
AATAGAAGAGAGGTTTGGGA+GGG 0.610737 7_4:+7730481 Msa1138320:three_prime_UTR
CAATAGAAGAGAGGTTTGGG+AGG 0.612327 7_4:+7730480 Msa1138320:three_prime_UTR
AATTGAAATTATCAAATACC+AGG 0.613686 7_4:+7734175 Msa1138320:three_prime_UTR
TTTGTGGGGTTCTAAACTTG+TGG 0.615067 7_4:+7733781 Msa1138320:three_prime_UTR
GCGTGATATGTGTTTGTCAA+AGG 0.617247 7_4:+7732857 Msa1138320:three_prime_UTR
CTACAGCACACAAAACGCGC+TGG 0.618622 7_4:+7729142 Msa1138320:CDS
AACGACTAATTAAGCTACCT+AGG 0.619051 7_4:-7732767 None:intergenic
CTTGAAGTTCTAGCTATCCG+TGG 0.620183 7_4:+7733911 Msa1138320:three_prime_UTR
AGAAGCCAGTTTGTTAAGTG+GGG 0.621243 7_4:+7729877 Msa1138320:three_prime_UTR
AGTTGGTATTGAATGATCCA+AGG 0.623133 7_4:+7733537 Msa1138320:three_prime_UTR
CTCATACCTAATAAAAGGAG+AGG 0.623253 7_4:+7732527 Msa1138320:three_prime_UTR
ACTTCACAAACTGCATGTAG+AGG 0.627877 7_4:+7733700 Msa1138320:three_prime_UTR
TAAACTTGGAATTGATGGAG+AGG 0.632717 7_4:+7734099 Msa1138320:three_prime_UTR
CAAACACAGACCAGAAATGG+AGG 0.634287 7_4:-7734878 None:intergenic
CCAAGTACAATGATAGCCAA+AGG 0.634965 7_4:-7732444 None:intergenic
TCATCACATGTAGATCCCAA+AGG 0.635239 7_4:+7730733 Msa1138320:three_prime_UTR
CTTCCTCTTCCAAAGAGGAG+AGG 0.635952 7_4:+7730524 Msa1138320:three_prime_UTR
GAAACACTGGTGGAGTTCGT+AGG 0.636730 7_4:+7732976 Msa1138320:three_prime_UTR
TGGTTCAAGTTGGTCAAATG+GGG 0.640519 7_4:+7732793 Msa1138320:three_prime_UTR
TTCTAATTTAGAAGAGTGGG+CGG 0.642003 7_4:+7733937 Msa1138320:three_prime_UTR
ATATGGTTGCAAAATGTGCT+GGG 0.642254 7_4:+7732418 Msa1138320:three_prime_UTR
GTTTATATTTGTGGAATGGG+CGG 0.648482 7_4:+7730361 Msa1138320:three_prime_UTR
ATGCTCAATCTACAAAGATG+AGG 0.650944 7_4:-7733977 None:intergenic
ATTGTGGTATGGTATTCTAG+TGG 0.651194 7_4:-7729242 None:intergenic
GGAATCAATTTATCAACGTG+TGG 0.654047 7_4:-7733023 None:intergenic
ATGTAGAGGGAAGAATGGAA+AGG 0.654972 7_4:+7733714 Msa1138320:three_prime_UTR
AAGGCTTGCTTCATGAACCA+GGG 0.661283 7_4:+7730752 Msa1138320:three_prime_UTR
TCTAGTGGTATATAAGAACA+CGG 0.667382 7_4:-7729227 None:intergenic
AGTAAGTTGGGATTCAACTG+TGG 0.671951 7_4:+7733337 Msa1138320:three_prime_UTR
AAGGGAATCAAGATTAGCTG+GGG 0.677648 7_4:+7732557 Msa1138320:three_prime_UTR
TTAGATGCAAGAAACACTGG+TGG 0.683553 7_4:+7732966 Msa1138320:three_prime_UTR
AAAGCAGGATGAATGTGGTG+AGG 0.684543 7_4:+7729970 Msa1138320:three_prime_UTR
CTAGTGGTATATAAGAACAC+GGG 0.702347 7_4:-7729226 None:intergenic
GAGAGAAAGCAGGATGAATG+TGG 0.703252 7_4:+7729965 Msa1138320:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAATTTAATTAATATAAG+AGG + chr7_4:7730981-7731000 Msa1138320:intron 10.0%
!!! TTTAATTTGTATTTTGTAAT+AGG + chr7_4:7731592-7731611 Msa1138320:intron 10.0%
!!! AAATTTTTTTATTTTGCTTT+TGG + chr7_4:7731815-7731834 Msa1138320:intron 10.0%
!!! AATATTTTTTATTTTGCTTT+TGG - chr7_4:7732031-7732050 None:intergenic 10.0%
!! AACTATACTATTAAATTATT+TGG + chr7_4:7732172-7732191 Msa1138320:intron 10.0%
!! AAAATAAATTAATTCAATTG+TGG + chr7_4:7732670-7732689 Msa1138320:three_prime_UTR 10.0%
!!! ACTATTTGTATATTTTAAAT+AGG + chr7_4:7734985-7735004 Msa1138320:three_prime_UTR 10.0%
!!! TTTTTAAATAATTTGTAGTT+TGG + chr7_4:7735121-7735140 Msa1138320:three_prime_UTR 10.0%
!!! TCTTGAAAATGAATTTTTTA+TGG - chr7_4:7730065-7730084 None:intergenic 15.0%
!!! AACAACTTAAATTTTCAAAT+AGG - chr7_4:7731561-7731580 None:intergenic 15.0%
!! ATTAATTTACAAGATGAAAT+GGG + chr7_4:7731669-7731688 Msa1138320:intron 15.0%
!! ACAAGATTTAAATATATTGA+AGG + chr7_4:7731708-7731727 Msa1138320:intron 15.0%
!! GCAAAATAAAAAAATTTGAA+AGG - chr7_4:7731812-7731831 None:intergenic 15.0%
!!! CAATATAAATTAATTTTGCA+AGG - chr7_4:7731862-7731881 None:intergenic 15.0%
!! CTTGCAAAATTAATTTATAT+TGG + chr7_4:7731860-7731879 Msa1138320:intron 15.0%
!! GCAAAATAAAAAATATTGTA+AGG + chr7_4:7732034-7732053 Msa1138320:intron 15.0%
!! TATACTATTAAATTATTTGG+TGG + chr7_4:7732175-7732194 Msa1138320:intron 15.0%
!! ATACTATTAAATTATTTGGT+GGG + chr7_4:7732176-7732195 Msa1138320:intron 15.0%
!! ATAAAATAAAGAAAACGTAA+GGG - chr7_4:7734238-7734257 None:intergenic 15.0%
!! AATAAAATAAAGAAAACGTA+AGG - chr7_4:7734239-7734258 None:intergenic 15.0%
!!! CTTATTTATGGATATTTTAT+TGG + chr7_4:7734923-7734942 Msa1138320:three_prime_UTR 15.0%
!!! ATTTGGAGATATATATTTTT+AGG + chr7_4:7734956-7734975 Msa1138320:three_prime_UTR 15.0%
!!! TTTGGAGATATATATTTTTA+GGG + chr7_4:7734957-7734976 Msa1138320:three_prime_UTR 15.0%
!! TACTAAATTACTAGAGAATA+AGG - chr7_4:7729369-7729388 None:intergenic 20.0%
!!! TTTTAGTTCATAGATAAAGT+TGG + chr7_4:7729509-7729528 Msa1138320:intron 20.0%
!! TCATAAAAATCTCTTATCAT+TGG - chr7_4:7729597-7729616 None:intergenic 20.0%
!!! AGATTTTTATGAAACCTATT+TGG + chr7_4:7729605-7729624 Msa1138320:intron 20.0%
!!! GATTTTTATGAAACCTATTT+GGG + chr7_4:7729606-7729625 Msa1138320:intron 20.0%
!! TTTATCATTATAGTTCCATT+AGG + chr7_4:7730413-7730432 Msa1138320:three_prime_UTR 20.0%
!! TCGATAAATCCAAAATAATA+TGG + chr7_4:7731088-7731107 Msa1138320:intron 20.0%
!!! GAAACTAATCCATATTATTT+TGG - chr7_4:7731100-7731119 None:intergenic 20.0%
!! CATTAATTTACAAGATGAAA+TGG + chr7_4:7731668-7731687 Msa1138320:intron 20.0%
!! TTAATTTACAAGATGAAATG+GGG + chr7_4:7731670-7731689 Msa1138320:intron 20.0%
!!! TGAAGGTTTTAATATGTATT+TGG + chr7_4:7731725-7731744 Msa1138320:intron 20.0%
!! ACCAAAATGTAATATATTTG+CGG - chr7_4:7731754-7731773 None:intergenic 20.0%
!!! TAACTGTTATAGTTTAGTTT+TGG + chr7_4:7731785-7731804 Msa1138320:intron 20.0%
!!! ATATGTAGAATATGTGATTT+TGG + chr7_4:7731897-7731916 Msa1138320:intron 20.0%
!!! TCAATTTTTTTGTTTGGTTT+TGG - chr7_4:7732061-7732080 None:intergenic 20.0%
!! AAAAGAAACAATCAATGAAT+GGG + chr7_4:7732482-7732501 Msa1138320:three_prime_UTR 20.0%
!!! AAACAAGTTTTCAATTGATA+AGG - chr7_4:7732609-7732628 None:intergenic 20.0%
!! TCATTAATGCTATTATTGTT+TGG - chr7_4:7732924-7732943 None:intergenic 20.0%
!!! TAGTAATAGTTTGCAAATTA+AGG - chr7_4:7733316-7733335 None:intergenic 20.0%
!! AAACTATTACTAAAGTAAGT+TGG + chr7_4:7733324-7733343 Msa1138320:three_prime_UTR 20.0%
!! AACTATTACTAAAGTAAGTT+GGG + chr7_4:7733325-7733344 Msa1138320:three_prime_UTR 20.0%
!!! TTTAACTTCCATAATATGTT+TGG - chr7_4:7733368-7733387 None:intergenic 20.0%
!! AATTGAAATTATCAAATACC+AGG + chr7_4:7734175-7734194 Msa1138320:three_prime_UTR 20.0%
!!! TGTGCATTTATTTTTCAATT+AGG + chr7_4:7734275-7734294 Msa1138320:intron 20.0%
!!! TTGGAGATATATATTTTTAG+GGG + chr7_4:7734958-7734977 Msa1138320:three_prime_UTR 20.0%
!!! TTTGTGGGTAATTTTTAATT+AGG + chr7_4:7735070-7735089 Msa1138320:three_prime_UTR 20.0%
! TCACTACCAAAAAAAATGAA+AGG + chr7_4:7729071-7729090 Msa1138320:intron 25.0%
! CACTACCAAAAAAAATGAAA+GGG + chr7_4:7729072-7729091 Msa1138320:intron 25.0%
! ACTACCAAAAAAAATGAAAG+GGG + chr7_4:7729073-7729092 Msa1138320:intron 25.0%
!! GTCAGAATTGGAATTTATTT+TGG + chr7_4:7729096-7729115 Msa1138320:intron 25.0%
! GAAGAAGAAAAACAAATTCA+AGG + chr7_4:7729319-7729338 Msa1138320:CDS 25.0%
!! CATTATTAGAAATTTTCTGC+AGG + chr7_4:7729785-7729804 Msa1138320:intron 25.0%
!!! TTGTGTCATTTACAATTGAA+AGG + chr7_4:7729834-7729853 Msa1138320:three_prime_UTR 25.0%
! TCTATCAATTCTCAAATAGT+CGG + chr7_4:7730142-7730161 Msa1138320:three_prime_UTR 25.0%
! TATAAACCATTTGACAATGT+TGG - chr7_4:7730348-7730367 None:intergenic 25.0%
! TGTCAAATGGTTTATATTTG+TGG + chr7_4:7730352-7730371 Msa1138320:three_prime_UTR 25.0%
! AATGGTTTATATTTGTGGAA+TGG + chr7_4:7730357-7730376 Msa1138320:three_prime_UTR 25.0%
! ATGGTTTATATTTGTGGAAT+GGG + chr7_4:7730358-7730377 Msa1138320:three_prime_UTR 25.0%
!!! CTTTGTATTTTTTGATGGAA+AGG - chr7_4:7730677-7730696 None:intergenic 25.0%
!!! TTGCTCTTTGTATTTTTTGA+TGG - chr7_4:7730682-7730701 None:intergenic 25.0%
! GAATAGACAAATAATATGAG+AGG - chr7_4:7731060-7731079 None:intergenic 25.0%
!! CGATTTAAGCTCATTATTTT+CGG - chr7_4:7731259-7731278 None:intergenic 25.0%
! CGAAAATAATGAGCTTAAAT+CGG + chr7_4:7731257-7731276 Msa1138320:intron 25.0%
! GAAAATAATGAGCTTAAATC+GGG + chr7_4:7731258-7731277 Msa1138320:intron 25.0%
! AAAATAATGAGCTTAAATCG+GGG + chr7_4:7731259-7731278 Msa1138320:intron 25.0%
!!! ACTCTATTTCTTTTAAGAAC+TGG - chr7_4:7731340-7731359 None:intergenic 25.0%
! ATACACCAAAATTATCGTAA+TGG - chr7_4:7731366-7731385 None:intergenic 25.0%
!! GATGTTTGTTACTATAGTTT+CGG - chr7_4:7731447-7731466 None:intergenic 25.0%
!!! TCTTCATTTCTTTTGAGAAA+TGG + chr7_4:7731465-7731484 Msa1138320:intron 25.0%
! AGCAAAAGATCAAGTTAATA+AGG - chr7_4:7731501-7731520 None:intergenic 25.0%
!! ATCTTTTGCTTAGTTAAGAA+GGG + chr7_4:7731511-7731530 Msa1138320:intron 25.0%
!! TTCAAATAGGCAAATTTTAC+CGG - chr7_4:7731548-7731567 None:intergenic 25.0%
!! TCCGCAAATATATTACATTT+TGG + chr7_4:7731750-7731769 Msa1138320:intron 25.0%
! TTTACGTCATTAATATTGGA+GGG + chr7_4:7731922-7731941 Msa1138320:intron 25.0%
! CAATTATTCTACGTATCATA+AGG + chr7_4:7731953-7731972 Msa1138320:intron 25.0%
!!! GTCTCTTCAATTTTTTTGTT+TGG - chr7_4:7732067-7732086 None:intergenic 25.0%
!!! TCTCTAAATGTATCACTTTT+TGG - chr7_4:7732095-7732114 None:intergenic 25.0%
! ATGATTTCGAAAAACTTGTA+CGG + chr7_4:7732232-7732251 Msa1138320:intron 25.0%
! CAAAAGAAACAATCAATGAA+TGG + chr7_4:7732481-7732500 Msa1138320:three_prime_UTR 25.0%
! ATAACCTCATACCTAATAAA+AGG + chr7_4:7732522-7732541 Msa1138320:three_prime_UTR 25.0%
! AACAAATTTCCAACTTCTTT+AGG - chr7_4:7733212-7733231 None:intergenic 25.0%
!!! AAGAAGTTGGAAATTTGTTT+TGG + chr7_4:7733213-7733232 Msa1138320:three_prime_UTR 25.0%
! TGGAAATTCCAAACATATTA+TGG + chr7_4:7733357-7733376 Msa1138320:three_prime_UTR 25.0%
! GACATTTATATCTTCCTAAT+TGG + chr7_4:7733396-7733415 Msa1138320:three_prime_UTR 25.0%
!!! CGTAAAAGATTTGTTAAAAC+TGG + chr7_4:7733502-7733521 Msa1138320:three_prime_UTR 25.0%
!!! GCAAAATTTTGAAAATACCT+TGG - chr7_4:7733557-7733576 None:intergenic 25.0%
!! AAAGTTAACTTTGAAAACTG+TGG - chr7_4:7733764-7733783 None:intergenic 25.0%
!! AGTTTTCAAAGTTAACTTTG+TGG + chr7_4:7733765-7733784 Msa1138320:three_prime_UTR 25.0%
!! GTTTTCAAAGTTAACTTTGT+GGG + chr7_4:7733766-7733785 Msa1138320:three_prime_UTR 25.0%
!! TTTTCAAAGTTAACTTTGTG+GGG + chr7_4:7733767-7733786 Msa1138320:three_prime_UTR 25.0%
!! AATGTTTGTTGGAAAGAAAA+TGG + chr7_4:7733862-7733881 Msa1138320:three_prime_UTR 25.0%
! AAAATGGTATGCTCAATAAA+TGG + chr7_4:7733878-7733897 Msa1138320:three_prime_UTR 25.0%
!! CTTTTCTAATTTAGAAGAGT+GGG + chr7_4:7733934-7733953 Msa1138320:three_prime_UTR 25.0%
!!! AGTTTAGTCTTGAATGATTT+AGG - chr7_4:7734085-7734104 None:intergenic 25.0%
! AAATCATTCAAGACTAAACT+TGG + chr7_4:7734085-7734104 Msa1138320:three_prime_UTR 25.0%
! TAGTTGAAAAATACAATGGA+TGG - chr7_4:7734148-7734167 None:intergenic 25.0%
! TGCTTAGTTGAAAAATACAA+TGG - chr7_4:7734152-7734171 None:intergenic 25.0%
! TACCATATCTTATCTATAGT+GGG - chr7_4:7734362-7734381 None:intergenic 25.0%
! ATACCATATCTTATCTATAG+TGG - chr7_4:7734363-7734382 None:intergenic 25.0%
! TTAACTCAAATTCTACAAAC+TGG - chr7_4:7734460-7734479 None:intergenic 25.0%
!!! CATCTGTATTGATTAAAAGA+TGG - chr7_4:7734524-7734543 None:intergenic 25.0%
! TCATATGCATAAGAAAGATA+CGG - chr7_4:7734565-7734584 None:intergenic 25.0%
! CCATAAATAAGTTCAACAAA+GGG - chr7_4:7734914-7734933 None:intergenic 25.0%
! TCCATAAATAAGTTCAACAA+AGG - chr7_4:7734915-7734934 None:intergenic 25.0%
! TTATTGGTCATTGTACTATT+TGG + chr7_4:7734939-7734958 Msa1138320:three_prime_UTR 25.0%
! CTGAACTAAAAATGTGTAAT+TGG + chr7_4:7735037-7735056 Msa1138320:three_prime_UTR 25.0%
! AAAATTACCCACAAAGTTTA+GGG - chr7_4:7735065-7735084 None:intergenic 25.0%
! AAAAATTACCCACAAAGTTT+AGG - chr7_4:7735066-7735085 None:intergenic 25.0%
CTACCAAAAAAAATGAAAGG+GGG + chr7_4:7729074-7729093 Msa1138320:intron 30.0%
ATAGCACAAACAAAGGATAA+GGG + chr7_4:7729197-7729216 Msa1138320:CDS 30.0%
TCTAGTGGTATATAAGAACA+CGG - chr7_4:7729230-7729249 None:intergenic 30.0%
!! TTGTTTTTCTTCTTCTTCGT+CGG - chr7_4:7729314-7729333 None:intergenic 30.0%
!! ATCTTCAGTTTTATGGTTTC+TGG + chr7_4:7729439-7729458 Msa1138320:intron 30.0%
TGCAGGATAAATAATGATGA+TGG + chr7_4:7729802-7729821 Msa1138320:intron 30.0%
CAATTTGCAAGTCTTTGATT+TGG - chr7_4:7729910-7729929 None:intergenic 30.0%
ACTTGCAAATTGAACTAAAG+AGG + chr7_4:7729918-7729937 Msa1138320:three_prime_UTR 30.0%
GGCTATAAAGAATTGGATAT+CGG + chr7_4:7729991-7730010 Msa1138320:three_prime_UTR 30.0%
! AAAATTAGCTTATGATGCTG+AGG + chr7_4:7730021-7730040 Msa1138320:three_prime_UTR 30.0%
TTTATGATCATGCCTTAGTT+TGG - chr7_4:7730104-7730123 None:intergenic 30.0%
CTATCAATTCTCAAATAGTC+GGG + chr7_4:7730143-7730162 Msa1138320:three_prime_UTR 30.0%
ACTAGAAGTTTACAAACGTA+TGG + chr7_4:7730169-7730188 Msa1138320:three_prime_UTR 30.0%
! ACATAAAGAAAGTAGTGGAA+TGG + chr7_4:7730308-7730327 Msa1138320:three_prime_UTR 30.0%
TCAAAAATGCAATAGAAGAG+AGG + chr7_4:7730471-7730490 Msa1138320:three_prime_UTR 30.0%
GAACATGAGAGATAATGAAT+TGG + chr7_4:7730558-7730577 Msa1138320:three_prime_UTR 30.0%
TCTTAAATGCAGAAGATAGT+TGG + chr7_4:7730776-7730795 Msa1138320:three_prime_UTR 30.0%
CTTAAATGCAGAAGATAGTT+GGG + chr7_4:7730777-7730796 Msa1138320:three_prime_UTR 30.0%
TCAAGATACAAGTATATACC+TGG - chr7_4:7730841-7730860 None:intergenic 30.0%
TAATCTTCCTTTCACTAAGT+TGG + chr7_4:7731011-7731030 Msa1138320:intron 30.0%
AATCTTCCTTTCACTAAGTT+GGG + chr7_4:7731012-7731031 Msa1138320:intron 30.0%
TCAAAACTTTGAATGCTAGA+AGG - chr7_4:7731150-7731169 None:intergenic 30.0%
ATCTGCAAAATAATTAGACG+CGG + chr7_4:7731201-7731220 Msa1138320:intron 30.0%
! GTTGTCCATTACGATAATTT+TGG + chr7_4:7731358-7731377 Msa1138320:intron 30.0%
TATAGTTTCGGAGTGAATAA+AGG - chr7_4:7731435-7731454 None:intergenic 30.0%
!! CATTTCTTTTGAGAAATGGA+AGG + chr7_4:7731469-7731488 Msa1138320:intron 30.0%
! GATCTTTTGCTTAGTTAAGA+AGG + chr7_4:7731510-7731529 Msa1138320:intron 30.0%
CACATATTCTACATATTGCA+GGG - chr7_4:7731893-7731912 None:intergenic 30.0%
TCACATATTCTACATATTGC+AGG - chr7_4:7731894-7731913 None:intergenic 30.0%
GGTCTTTACGTCATTAATAT+TGG + chr7_4:7731918-7731937 Msa1138320:intron 30.0%
CTTTACGTCATTAATATTGG+AGG + chr7_4:7731921-7731940 Msa1138320:intron 30.0%
! TGCGCAAAATTGGTTTATAT+TGG - chr7_4:7731986-7732005 None:intergenic 30.0%
CAGACTAAAACAAAAGAACA+AGG + chr7_4:7732004-7732023 Msa1138320:intron 30.0%
! CTATTAAATTATTTGGTGGG+TGG + chr7_4:7732179-7732198 Msa1138320:intron 30.0%
CAAATTGTGAATTCTGCAAA+AGG - chr7_4:7732372-7732391 None:intergenic 30.0%
TGCAATGAGTTTGAAAGATT+AGG + chr7_4:7732390-7732409 Msa1138320:three_prime_UTR 30.0%
GGTATGAGGTTATATGTTTA+TGG - chr7_4:7732515-7732534 None:intergenic 30.0%
ATCTCGATATGAGATTGAAA+GGG + chr7_4:7732713-7732732 Msa1138320:three_prime_UTR 30.0%
TAGCTTAATTAGTCGTTGTA+TGG + chr7_4:7732773-7732792 Msa1138320:three_prime_UTR 30.0%
ACATATCACGCATTAAATCA+TGG - chr7_4:7732848-7732867 None:intergenic 30.0%
TTATTAGATGCAAGAAACAC+TGG + chr7_4:7732963-7732982 Msa1138320:three_prime_UTR 30.0%
!!! GCTTGCTTTTTTCTTTGATT+TGG + chr7_4:7732998-7733017 Msa1138320:three_prime_UTR 30.0%
TCATTCACTTGCTTATTAAG+CGG - chr7_4:7733047-7733066 None:intergenic 30.0%
AGATCTCTTGTACATTTCAA+TGG + chr7_4:7733074-7733093 Msa1138320:three_prime_UTR 30.0%
!!! ACTACTTAGAACTGTTTTTG+AGG + chr7_4:7733124-7733143 Msa1138320:three_prime_UTR 30.0%
! TCTTGATCTTGAAGGTTTTA+AGG + chr7_4:7733166-7733185 Msa1138320:three_prime_UTR 30.0%
!! CTTGATCTTGAAGGTTTTAA+GGG + chr7_4:7733167-7733186 Msa1138320:three_prime_UTR 30.0%
CAAATTCTTCCATCTTCATT+AGG + chr7_4:7733269-7733288 Msa1138320:three_prime_UTR 30.0%
TTATATCTTCCTAATTGGTG+TGG + chr7_4:7733401-7733420 Msa1138320:three_prime_UTR 30.0%
! ATCTTTTACGTCACATTTAC+TGG - chr7_4:7733492-7733511 None:intergenic 30.0%
GATCATTCAATACCAACTTT+CGG - chr7_4:7733535-7733554 None:intergenic 30.0%
TAATGCAAAGTTGAAATGCT+TGG + chr7_4:7733595-7733614 Msa1138320:three_prime_UTR 30.0%
!!! TGAAAGCAAGTTGGTTTTTA+AGG - chr7_4:7733630-7733649 None:intergenic 30.0%
AGTGGTAGATGTTGAAAAAT+TGG + chr7_4:7733661-7733680 Msa1138320:three_prime_UTR 30.0%
AGATGTTGAAAAATTGGTGT+TGG + chr7_4:7733667-7733686 Msa1138320:three_prime_UTR 30.0%
! GATGTTGAAAAATTGGTGTT+GGG + chr7_4:7733668-7733687 Msa1138320:three_prime_UTR 30.0%
! ATAGCTAGAACTTCAAGTTT+AGG - chr7_4:7733908-7733927 None:intergenic 30.0%
CTTCTAAATTAGAAAAGCCA+CGG - chr7_4:7733931-7733950 None:intergenic 30.0%
! GCTTTTCTAATTTAGAAGAG+TGG + chr7_4:7733933-7733952 Msa1138320:three_prime_UTR 30.0%
AAGACTAAACTTGGAATTGA+TGG + chr7_4:7734094-7734113 Msa1138320:three_prime_UTR 30.0%
TCAAATACCAGGTACAATAT+AGG + chr7_4:7734186-7734205 Msa1138320:three_prime_UTR 30.0%
AAATTCACCTATATTGTACC+TGG - chr7_4:7734196-7734215 None:intergenic 30.0%
TATCAAAACCTAACACTAGT+GGG + chr7_4:7734380-7734399 Msa1138320:intron 30.0%
CCCTTTGTTGAACTTATTTA+TGG + chr7_4:7734911-7734930 Msa1138320:three_prime_UTR 30.0%
CTGAACTTCCTTGAAATAAT+AGG + chr7_4:7735011-7735030 Msa1138320:three_prime_UTR 30.0%
TTCAGAAGCCTATTATTTCA+AGG - chr7_4:7735022-7735041 None:intergenic 30.0%
!!! TGACCCCCTTTCATTTTTTT+TGG - chr7_4:7729080-7729099 None:intergenic 35.0%
CATAGCACAAACAAAGGATA+AGG + chr7_4:7729196-7729215 Msa1138320:CDS 35.0%
CTAGTGGTATATAAGAACAC+GGG - chr7_4:7729229-7729248 None:intergenic 35.0%
ATTGTGGTATGGTATTCTAG+TGG - chr7_4:7729245-7729264 None:intergenic 35.0%
TAAGCTCAACTCACTATTCA+AGG + chr7_4:7729271-7729290 Msa1138320:CDS 35.0%
! TGTTTTTCTTCTTCTTCGTC+GGG - chr7_4:7729313-7729332 None:intergenic 35.0%
AACCCATCCAAATTGATACT+GGG - chr7_4:7729699-7729718 None:intergenic 35.0%
! AACTGGCTTCTTCAATTAAG+AGG - chr7_4:7729868-7729887 None:intergenic 35.0%
!! AAGAAGCCAGTTTGTTAAGT+GGG + chr7_4:7729876-7729895 Msa1138320:three_prime_UTR 35.0%
CTAAGGCATGATCATAAAGT+TGG + chr7_4:7730106-7730125 Msa1138320:three_prime_UTR 35.0%
TGGGAACATAAAGAAAGTAG+TGG + chr7_4:7730303-7730322 Msa1138320:three_prime_UTR 35.0%
TCAAGACCAACATTGTCAAA+TGG + chr7_4:7730339-7730358 Msa1138320:three_prime_UTR 35.0%
GTTTATATTTGTGGAATGGG+CGG + chr7_4:7730361-7730380 Msa1138320:three_prime_UTR 35.0%
AATGCAATAGAAGAGAGGTT+TGG + chr7_4:7730476-7730495 Msa1138320:three_prime_UTR 35.0%
ATGCAATAGAAGAGAGGTTT+GGG + chr7_4:7730477-7730496 Msa1138320:three_prime_UTR 35.0%
GAAAATGTGTTTGATCGTCT+TGG + chr7_4:7730609-7730628 Msa1138320:three_prime_UTR 35.0%
!!! GTATTTTTTGATGGAAAGGC+TGG - chr7_4:7730673-7730692 None:intergenic 35.0%
! TTTTCAGCAATAGATGATCC+AGG + chr7_4:7730820-7730839 Msa1138320:three_prime_UTR 35.0%
TCTGCAAAATAATTAGACGC+GGG + chr7_4:7731202-7731221 Msa1138320:intron 35.0%
!!! CTCATTATTTTCGGTGTTTC+TGG - chr7_4:7731250-7731269 None:intergenic 35.0%
CTAATTATCCTCGACAATGT+TGG + chr7_4:7731392-7731411 Msa1138320:intron 35.0%
AGGCATGTAACAAAAGAACA+TGG - chr7_4:7731842-7731861 None:intergenic 35.0%
!!! TGTTTTAGTCTGCGCAAAAT+TGG - chr7_4:7731996-7732015 None:intergenic 35.0%
TGAAAGATTAGGCAGAGATA+TGG + chr7_4:7732401-7732420 Msa1138320:three_prime_UTR 35.0%
ATATGGTTGCAAAATGTGCT+GGG + chr7_4:7732418-7732437 Msa1138320:three_prime_UTR 35.0%
! CTCTCCTTTTATTAGGTATG+AGG - chr7_4:7732529-7732548 None:intergenic 35.0%
CTCATACCTAATAAAAGGAG+AGG + chr7_4:7732527-7732546 Msa1138320:three_prime_UTR 35.0%
! CAAGTACCTCTCCTTTTATT+AGG - chr7_4:7732536-7732555 None:intergenic 35.0%
!! TAAAAGGAGAGGTACTTGAA+AGG + chr7_4:7732538-7732557 Msa1138320:three_prime_UTR 35.0%
!! AAAAGGAGAGGTACTTGAAA+GGG + chr7_4:7732539-7732558 Msa1138320:three_prime_UTR 35.0%
! AAAGGGAATCAAGATTAGCT+GGG + chr7_4:7732556-7732575 Msa1138320:three_prime_UTR 35.0%
TTTGGTATCTCAAAGTCTTC+AGG - chr7_4:7732651-7732670 None:intergenic 35.0%
! ATTCAATTGTGGATTGCAGA+AGG + chr7_4:7732681-7732700 Msa1138320:three_prime_UTR 35.0%
CATCTCGATATGAGATTGAA+AGG + chr7_4:7732712-7732731 Msa1138320:three_prime_UTR 35.0%
AACGACTAATTAAGCTACCT+AGG - chr7_4:7732770-7732789 None:intergenic 35.0%
!! TATGGTTCAAGTTGGTCAAA+TGG + chr7_4:7732791-7732810 Msa1138320:three_prime_UTR 35.0%
!! ATGGTTCAAGTTGGTCAAAT+GGG + chr7_4:7732792-7732811 Msa1138320:three_prime_UTR 35.0%
GGAATCAATTTATCAACGTG+TGG - chr7_4:7733026-7733045 None:intergenic 35.0%
CTTAGAGTTCTTGATCTTGA+AGG + chr7_4:7733158-7733177 Msa1138320:three_prime_UTR 35.0%
CAATTGTTGCCTAAAGAAGT+TGG + chr7_4:7733200-7733219 Msa1138320:three_prime_UTR 35.0%
TCCATCTTCATTAGGCAAAT+TGG + chr7_4:7733277-7733296 Msa1138320:three_prime_UTR 35.0%
TCCAATTTGCCTAATGAAGA+TGG - chr7_4:7733281-7733300 None:intergenic 35.0%
TTTACGTCACATTTACTGGA+TGG - chr7_4:7733488-7733507 None:intergenic 35.0%
! AGTTGGTATTGAATGATCCA+AGG + chr7_4:7733537-7733556 Msa1138320:three_prime_UTR 35.0%
! GTTAACTTTGAAAACTGTGG+AGG - chr7_4:7733761-7733780 None:intergenic 35.0%
TAAACTTGTGGAAGATCCAA+TGG + chr7_4:7733793-7733812 Msa1138320:three_prime_UTR 35.0%
AGCTTCTCTAATGTTACCAT+TGG - chr7_4:7733812-7733831 None:intergenic 35.0%
CCACTTAGGTACTTCAAATT+AGG - chr7_4:7733836-7733855 None:intergenic 35.0%
! CCTAATTTGAAGTACCTAAG+TGG + chr7_4:7733833-7733852 Msa1138320:three_prime_UTR 35.0%
! ATTTGAAGTACCTAAGTGGA+TGG + chr7_4:7733837-7733856 Msa1138320:three_prime_UTR 35.0%
! TTTGAAGTACCTAAGTGGAT+GGG + chr7_4:7733838-7733857 Msa1138320:three_prime_UTR 35.0%
TTCTAATTTAGAAGAGTGGG+CGG + chr7_4:7733937-7733956 Msa1138320:three_prime_UTR 35.0%
ATGCTCAATCTACAAAGATG+AGG - chr7_4:7733980-7733999 None:intergenic 35.0%
AAGTTAAAGACTGTTCCTGA+TGG + chr7_4:7734013-7734032 Msa1138320:three_prime_UTR 35.0%
TAAACTTGGAATTGATGGAG+AGG + chr7_4:7734099-7734118 Msa1138320:three_prime_UTR 35.0%
CTAATCATATATAACCAGGC+AGG - chr7_4:7734325-7734344 None:intergenic 35.0%
CAGGCTAATCATATATAACC+AGG - chr7_4:7734329-7734348 None:intergenic 35.0%
GTCCCACTATAGATAAGATA+TGG + chr7_4:7734357-7734376 Msa1138320:intron 35.0%
GTATCAAAACCTAACACTAG+TGG + chr7_4:7734379-7734398 Msa1138320:intron 35.0%
ATCAAAACCTAACACTAGTG+GGG + chr7_4:7734381-7734400 Msa1138320:intron 35.0%
!! AATTCTACAAACTGGCTTGT+AGG - chr7_4:7734452-7734471 None:intergenic 35.0%
ACAATATGTGAGAAACGCAA+GGG - chr7_4:7734602-7734621 None:intergenic 35.0%
AACAATATGTGAGAAACGCA+AGG - chr7_4:7734603-7734622 None:intergenic 35.0%
TAACCAAGCAAATGCGAAAT+AGG + chr7_4:7734632-7734651 Msa1138320:intron 35.0%
TTTCCTATTTCGCATTTGCT+TGG - chr7_4:7734638-7734657 None:intergenic 35.0%
ATGATGAATACCTCCATTTC+TGG + chr7_4:7734868-7734887 Msa1138320:three_prime_UTR 35.0%
AAACAAACACAGACCAGAAA+TGG - chr7_4:7734884-7734903 None:intergenic 35.0%
AATTGGATCCCTAAACTTTG+TGG + chr7_4:7735054-7735073 Msa1138320:three_prime_UTR 35.0%
ATTGGATCCCTAAACTTTGT+GGG + chr7_4:7735055-7735074 Msa1138320:three_prime_UTR 35.0%
AAATGAAAGGGGGTCAGAAT+TGG + chr7_4:7729084-7729103 Msa1138320:intron 40.0%
! GAATAGTGAGTTGAGCTTAG+CGG - chr7_4:7729270-7729289 None:intergenic 40.0%
! GTTTTTCTTCTTCTTCGTCG+GGG - chr7_4:7729312-7729331 None:intergenic 40.0%
! CGCTGCTATCTTCAGTTTTA+TGG + chr7_4:7729432-7729451 Msa1138320:intron 40.0%
!! ACCTATTTGGGTTGATCTAG+TGG + chr7_4:7729618-7729637 Msa1138320:intron 40.0%
ACCACTAGATCAACCCAAAT+AGG - chr7_4:7729622-7729641 None:intergenic 40.0%
!! TTGATCTAGTGGTGTTGGTT+TGG + chr7_4:7729629-7729648 Msa1138320:intron 40.0%
!! TGATCTAGTGGTGTTGGTTT+GGG + chr7_4:7729630-7729649 Msa1138320:intron 40.0%
GAATCAAACCTGAAACCTTG+AGG - chr7_4:7729674-7729693 None:intergenic 40.0%
GATTCTCCCCAGTATCAATT+TGG + chr7_4:7729689-7729708 Msa1138320:intron 40.0%
TCCCCAGTATCAATTTGGAT+GGG + chr7_4:7729694-7729713 Msa1138320:intron 40.0%
ACCCATCCAAATTGATACTG+GGG - chr7_4:7729698-7729717 None:intergenic 40.0%
CAACCCATCCAAATTGATAC+TGG - chr7_4:7729700-7729719 None:intergenic 40.0%
CAGTATCAATTTGGATGGGT+TGG + chr7_4:7729698-7729717 Msa1138320:intron 40.0%
!! GAAGAAGCCAGTTTGTTAAG+TGG + chr7_4:7729875-7729894 Msa1138320:three_prime_UTR 40.0%
!! AGAAGCCAGTTTGTTAAGTG+GGG + chr7_4:7729877-7729896 Msa1138320:three_prime_UTR 40.0%
ACTTACCCCACTTAACAAAC+TGG - chr7_4:7729885-7729904 None:intergenic 40.0%
!! AGTTTGTTAAGTGGGGTAAG+TGG + chr7_4:7729884-7729903 Msa1138320:three_prime_UTR 40.0%
AGAGGATGCAATGCTTCTTA+AGG + chr7_4:7729936-7729955 Msa1138320:three_prime_UTR 40.0%
GAGGATGCAATGCTTCTTAA+GGG + chr7_4:7729937-7729956 Msa1138320:three_prime_UTR 40.0%
ACATTCATCCTGCTTTCTCT+CGG - chr7_4:7729966-7729985 None:intergenic 40.0%
GTGGTGAGGCTATAAAGAAT+TGG + chr7_4:7729984-7730003 Msa1138320:three_prime_UTR 40.0%
TGACTCCTTTCTCCAAACTA+AGG + chr7_4:7730089-7730108 Msa1138320:three_prime_UTR 40.0%
! TCATGCCTTAGTTTGGAGAA+AGG - chr7_4:7730097-7730116 None:intergenic 40.0%
AGACACAGAGACAATTGAGA+TGG + chr7_4:7730239-7730258 Msa1138320:three_prime_UTR 40.0%
GTAGCTGATGAGTTAACTGT+AGG + chr7_4:7730274-7730293 Msa1138320:three_prime_UTR 40.0%
TGATGAGTTAACTGTAGGCT+TGG + chr7_4:7730279-7730298 Msa1138320:three_prime_UTR 40.0%
AGTTAACTGTAGGCTTGGAT+GGG + chr7_4:7730284-7730303 Msa1138320:three_prime_UTR 40.0%
!! ACACTTTGAGGGTTTTGCTT+GGG + chr7_4:7730438-7730457 Msa1138320:three_prime_UTR 40.0%
AATAGAAGAGAGGTTTGGGA+GGG + chr7_4:7730481-7730500 Msa1138320:three_prime_UTR 40.0%
TACTACTTCCTCTTCCAAAG+AGG + chr7_4:7730519-7730538 Msa1138320:three_prime_UTR 40.0%
GGGATCTACATGTGATGAAA+TGG - chr7_4:7730731-7730750 None:intergenic 40.0%
TCATCACATGTAGATCCCAA+AGG + chr7_4:7730733-7730752 Msa1138320:three_prime_UTR 40.0%
TCTTCTGCATTTAAGAACCC+TGG - chr7_4:7730772-7730791 None:intergenic 40.0%
GCTGTTCACAGTAGAATCAT+TGG + chr7_4:7730922-7730941 Msa1138320:intron 40.0%
TCTCAACCCAACTTAGTGAA+AGG - chr7_4:7731021-7731040 None:intergenic 40.0%
CTGCAAAATAATTAGACGCG+GGG + chr7_4:7731203-7731222 Msa1138320:intron 40.0%
! CACATTTTCCAACATTGTCG+AGG - chr7_4:7731403-7731422 None:intergenic 40.0%
GATATGGTTGCAAAATGTGC+TGG + chr7_4:7732417-7732436 Msa1138320:three_prime_UTR 40.0%
CCAAGTACAATGATAGCCAA+AGG - chr7_4:7732447-7732466 None:intergenic 40.0%
CCTTTGGCTATCATTGTACT+TGG + chr7_4:7732444-7732463 Msa1138320:three_prime_UTR 40.0%
TTGGCTATCATTGTACTTGG+AGG + chr7_4:7732447-7732466 Msa1138320:three_prime_UTR 40.0%
TGGCTATCATTGTACTTGGA+GGG + chr7_4:7732448-7732467 Msa1138320:three_prime_UTR 40.0%
! CATTGTACTTGGAGGGATTT+TGG + chr7_4:7732455-7732474 Msa1138320:three_prime_UTR 40.0%
GAAAGGGAATCAAGATTAGC+TGG + chr7_4:7732555-7732574 Msa1138320:three_prime_UTR 40.0%
! AAGGGAATCAAGATTAGCTG+GGG + chr7_4:7732557-7732576 Msa1138320:three_prime_UTR 40.0%
GATTGAAAGGGATGAAAGAG+TGG + chr7_4:7732725-7732744 Msa1138320:three_prime_UTR 40.0%
AGTCGTTGTATGGTTCAAGT+TGG + chr7_4:7732783-7732802 Msa1138320:three_prime_UTR 40.0%
!! TGGTTCAAGTTGGTCAAATG+GGG + chr7_4:7732793-7732812 Msa1138320:three_prime_UTR 40.0%
GCGTGATATGTGTTTGTCAA+AGG + chr7_4:7732857-7732876 Msa1138320:three_prime_UTR 40.0%
GTGTTTGTCAAAGGCTATGA+AGG + chr7_4:7732866-7732885 Msa1138320:three_prime_UTR 40.0%
TTAGATGCAAGAAACACTGG+TGG + chr7_4:7732966-7732985 Msa1138320:three_prime_UTR 40.0%
GGTAAGAAATGCAGAGTTCA+AGG + chr7_4:7733095-7733114 Msa1138320:three_prime_UTR 40.0%
AGAAATGCAGAGTTCAAGGT+TGG + chr7_4:7733099-7733118 Msa1138320:three_prime_UTR 40.0%
!!! TGAAGGTTTTAAGGGACCAA+AGG + chr7_4:7733175-7733194 Msa1138320:three_prime_UTR 40.0%
!!! GAAGGTTTTAAGGGACCAAA+GGG + chr7_4:7733176-7733195 Msa1138320:three_prime_UTR 40.0%
TTAGGCAACAATTGTCCCTT+TGG - chr7_4:7733194-7733213 None:intergenic 40.0%
! AGTAAGTTGGGATTCAACTG+TGG + chr7_4:7733337-7733356 Msa1138320:three_prime_UTR 40.0%
CAAACATCTCCACACCAATT+AGG - chr7_4:7733413-7733432 None:intergenic 40.0%
AATTGGTGTGGAGATGTTTG+TGG + chr7_4:7733413-7733432 Msa1138320:three_prime_UTR 40.0%
TTCAGGGAATGAAAGCAAGT+TGG - chr7_4:7733639-7733658 None:intergenic 40.0%
CAACATCTACCACTTGTTCA+GGG - chr7_4:7733655-7733674 None:intergenic 40.0%
TCAACATCTACCACTTGTTC+AGG - chr7_4:7733656-7733675 None:intergenic 40.0%
ACATGCAGTTTGTGAAGTGA+AGG - chr7_4:7733698-7733717 None:intergenic 40.0%
ACTTCACAAACTGCATGTAG+AGG + chr7_4:7733700-7733719 Msa1138320:three_prime_UTR 40.0%
CTTCACAAACTGCATGTAGA+GGG + chr7_4:7733701-7733720 Msa1138320:three_prime_UTR 40.0%
ATGTAGAGGGAAGAATGGAA+AGG + chr7_4:7733714-7733733 Msa1138320:three_prime_UTR 40.0%
GGAGGAAATAATTGAGCTTC+TGG - chr7_4:7733743-7733762 None:intergenic 40.0%
!! TTTGTGGGGTTCTAAACTTG+TGG + chr7_4:7733781-7733800 Msa1138320:three_prime_UTR 40.0%
CAAACATTTCCCATCCACTT+AGG - chr7_4:7733850-7733869 None:intergenic 40.0%
AGTGGATGGGAAATGTTTGT+TGG + chr7_4:7733851-7733870 Msa1138320:three_prime_UTR 40.0%
CAATCTACAAAGATGAGGCA+TGG - chr7_4:7733975-7733994 None:intergenic 40.0%
GCAACAAATGTTAGTCCATC+AGG - chr7_4:7734031-7734050 None:intergenic 40.0%
!! GATGGACTAACATTTGTTGC+TGG + chr7_4:7734031-7734050 Msa1138320:three_prime_UTR 40.0%
GACATGATAAAATACCTGCC+TGG + chr7_4:7734308-7734327 Msa1138320:intron 40.0%
! TCCTCACTTCTTTTGCAGTA+TGG + chr7_4:7734784-7734803 Msa1138320:intron 40.0%
!! AATCTTCTGAAGCGCATGAA+AGG - chr7_4:7734826-7734845 None:intergenic 40.0%
CGCTTGCATAGCACAAACAA+AGG + chr7_4:7729190-7729209 Msa1138320:CDS 45.0%
!! GAAGATAGCAGCGTTGACTA+TGG - chr7_4:7729425-7729444 None:intergenic 45.0%
!! TTGGGTTGATCTAGTGGTGT+TGG + chr7_4:7729624-7729643 Msa1138320:intron 45.0%
TCAAACCTGAAACCTTGAGG+AGG - chr7_4:7729671-7729690 None:intergenic 45.0%
CTCCCCAGTATCAATTTGGA+TGG + chr7_4:7729693-7729712 Msa1138320:intron 45.0%
GAGAGAAAGCAGGATGAATG+TGG + chr7_4:7729965-7729984 Msa1138320:three_prime_UTR 45.0%
AAAGCAGGATGAATGTGGTG+AGG + chr7_4:7729970-7729989 Msa1138320:three_prime_UTR 45.0%
GAGTTAACTGTAGGCTTGGA+TGG + chr7_4:7730283-7730302 Msa1138320:three_prime_UTR 45.0%
TTCCATTAGGCGACACTTTG+AGG + chr7_4:7730426-7730445 Msa1138320:three_prime_UTR 45.0%
TCCATTAGGCGACACTTTGA+GGG + chr7_4:7730427-7730446 Msa1138320:three_prime_UTR 45.0%
!! GACACTTTGAGGGTTTTGCT+TGG + chr7_4:7730437-7730456 Msa1138320:three_prime_UTR 45.0%
CAATAGAAGAGAGGTTTGGG+AGG + chr7_4:7730480-7730499 Msa1138320:three_prime_UTR 45.0%
TTCCTCTTCCAAAGAGGAGA+GGG + chr7_4:7730525-7730544 Msa1138320:three_prime_UTR 45.0%
AATCTCATCCCTCTCCTCTT+TGG - chr7_4:7730536-7730555 None:intergenic 45.0%
AAGAGGAGAGGGATGAGATT+AGG + chr7_4:7730536-7730555 Msa1138320:three_prime_UTR 45.0%
TGATCGTCTTGGATGACATC+TGG + chr7_4:7730620-7730639 Msa1138320:three_prime_UTR 45.0%
! ACATCTGGAGCAATGAGACT+TGG + chr7_4:7730635-7730654 Msa1138320:three_prime_UTR 45.0%
! CATCTGGAGCAATGAGACTT+GGG + chr7_4:7730636-7730655 Msa1138320:three_prime_UTR 45.0%
GGTTCATGAAGCAAGCCTTT+GGG - chr7_4:7730751-7730770 None:intergenic 45.0%
TGGTTCATGAAGCAAGCCTT+TGG - chr7_4:7730752-7730771 None:intergenic 45.0%
! AAAGGCTTGCTTCATGAACC+AGG + chr7_4:7730751-7730770 Msa1138320:three_prime_UTR 45.0%
! AAGGCTTGCTTCATGAACCA+GGG + chr7_4:7730752-7730771 Msa1138320:three_prime_UTR 45.0%
TGAAAGGGATGAAAGAGTGG+AGG + chr7_4:7732728-7732747 Msa1138320:three_prime_UTR 45.0%
TAAGCTACCTAGGTAACGCT+CGG - chr7_4:7732760-7732779 None:intergenic 45.0%
ACTGGAAAAGCTCCGAAAGT+TGG + chr7_4:7733520-7733539 Msa1138320:three_prime_UTR 45.0%
GCTTTCATTCCCTGAACAAG+TGG + chr7_4:7733643-7733662 Msa1138320:three_prime_UTR 45.0%
ACTGCATGTAGAGGGAAGAA+TGG + chr7_4:7733709-7733728 Msa1138320:three_prime_UTR 45.0%
! CTTGAAGTTCTAGCTATCCG+TGG + chr7_4:7733911-7733930 Msa1138320:three_prime_UTR 45.0%
! TATAGTGGGACTCTCAACAC+AGG - chr7_4:7734348-7734367 None:intergenic 45.0%
TCAAGTTCCCCACTAGTGTT+AGG - chr7_4:7734391-7734410 None:intergenic 45.0%
ACTTGAGTCACGTTCCAAAG+AGG + chr7_4:7734405-7734424 Msa1138320:intron 45.0%
GCCATACTGCAAAAGAAGTG+AGG - chr7_4:7734788-7734807 None:intergenic 45.0%
! TTCTTTTGCAGTATGGCAGC+AGG + chr7_4:7734791-7734810 Msa1138320:intron 45.0%
CAAACACAGACCAGAAATGG+AGG - chr7_4:7734881-7734900 None:intergenic 45.0%
!!! AATTGAATTAATTTATTTTT+TGG - chr7_4:7732669-7732688 None:intergenic 5.0%
! GTTTTGTGTGCTGTGCGTGT+GGG - chr7_4:7729169-7729188 None:intergenic 50.0%
!! GTGGTGTTGGTTTGGGATCT+TGG + chr7_4:7729637-7729656 Msa1138320:intron 50.0%
TTGGAGTGTGTTCCTCCTCA+AGG + chr7_4:7729656-7729675 Msa1138320:intron 50.0%
GTGTTCCTCCTCAAGGTTTC+AGG + chr7_4:7729663-7729682 Msa1138320:intron 50.0%
ATTTGTGGAATGGGCGGTCT+AGG + chr7_4:7730367-7730386 Msa1138320:three_prime_UTR 50.0%
!! ACCCTCAAAGTGTCGCCTAA+TGG - chr7_4:7730431-7730450 None:intergenic 50.0%
CTTCCTCTTCCAAAGAGGAG+AGG + chr7_4:7730524-7730543 Msa1138320:three_prime_UTR 50.0%
! ATCCCTCTCCTCTTTGGAAG+AGG - chr7_4:7730530-7730549 None:intergenic 50.0%
AAGAAGGGATTCTCACGAGC+CGG + chr7_4:7731526-7731545 Msa1138320:intron 50.0%
AAAATGTGCTGGGCTGCCTT+TGG + chr7_4:7732428-7732447 Msa1138320:three_prime_UTR 50.0%
GTTGGTCAAATGGGGTCTAC+TGG + chr7_4:7732801-7732820 Msa1138320:three_prime_UTR 50.0%
GAAACACTGGTGGAGTTCGT+AGG + chr7_4:7732976-7732995 Msa1138320:three_prime_UTR 50.0%
CCAAAGAGGCAGAAATCCCT+CGG + chr7_4:7734419-7734438 Msa1138320:intron 50.0%
GCTTGTAGGTTGTAAGCCGA+GGG - chr7_4:7734438-7734457 None:intergenic 50.0%
! CAGCGCGTTTTGTGTGCTGT+AGG - chr7_4:7729144-7729163 None:intergenic 55.0%
CTACAGCACACAAAACGCGC+TGG + chr7_4:7729142-7729161 Msa1138320:CDS 55.0%
! CGTTTTGTGTGCTGTGCGTG+TGG - chr7_4:7729170-7729189 None:intergenic 55.0%
GCTTAGCGGCGATTGTGGTA+TGG - chr7_4:7729256-7729275 None:intergenic 55.0%
GTTGAGCTTAGCGGCGATTG+TGG - chr7_4:7729261-7729280 None:intergenic 55.0%
AAGGGATGCCGAGAGAAAGC+AGG + chr7_4:7729955-7729974 Msa1138320:three_prime_UTR 55.0%
GATGTTGCCGAGCGTTACCT+AGG + chr7_4:7732750-7732769 Msa1138320:three_prime_UTR 55.0%
CCGAGGGATTTCTGCCTCTT+TGG - chr7_4:7734422-7734441 None:intergenic 55.0%
GGCTTGTAGGTTGTAAGCCG+AGG - chr7_4:7734439-7734458 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 7729057 7735145 7729057 ID=Msa1138320;Name=Msa1138320
chr7_4 mRNA 7729057 7735145 7729057 ID=Msa1138320-mRNA-1;Parent=Msa1138320;Name=Msa1138320-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.75|0.6|0.8|0.25|0|5|3199|76
chr7_4 exon 7729057 7729065 7729057 ID=Msa1138320-mRNA-1:exon:2133;Parent=Msa1138320-mRNA-1
chr7_4 exon 7729128 7729340 7729128 ID=Msa1138320-mRNA-1:exon:2134;Parent=Msa1138320-mRNA-1
chr7_4 exon 7729807 7730841 7729807 ID=Msa1138320-mRNA-1:exon:2135;Parent=Msa1138320-mRNA-1
chr7_4 exon 7732379 7734207 7732379 ID=Msa1138320-mRNA-1:exon:2136;Parent=Msa1138320-mRNA-1
chr7_4 exon 7734802 7735145 7734802 ID=Msa1138320-mRNA-1:exon:2137;Parent=Msa1138320-mRNA-1
chr7_4 CDS 7729057 7729065 7729057 ID=Msa1138320-mRNA-1:cds;Parent=Msa1138320-mRNA-1
chr7_4 CDS 7729128 7729340 7729128 ID=Msa1138320-mRNA-1:cds;Parent=Msa1138320-mRNA-1
chr7_4 CDS 7729807 7729815 7729807 ID=Msa1138320-mRNA-1:cds;Parent=Msa1138320-mRNA-1
chr7_4 three_prime_UTR 7729816 7730841 7729816 ID=Msa1138320-mRNA-1:three_prime_utr;Parent=Msa1138320-mRNA-1
chr7_4 three_prime_UTR 7732379 7734207 7732379 ID=Msa1138320-mRNA-1:three_prime_utr;Parent=Msa1138320-mRNA-1
chr7_4 three_prime_UTR 7734802 7735145 7734802 ID=Msa1138320-mRNA-1:three_prime_utr;Parent=Msa1138320-mRNA-1
Gene Sequence

>Msa1138320

ATGAAAGGGAAAAAAGAAATCTCCTACAGCACACAAAACGCGCTGGTCCCACACGCACAGCACACAAAACGCGCTTGCATAGCACAAACAAAGGATAAGGGTAGTGTCCCGTGTTCTTATATACCACTAGAATACCATACCACAATCGCCGCTAAGCTCAACTCACTATTCAAGGTGATAGTTTTTCTTACCCCGACGAAGAAGAAGAAAAACAAATTCAAGGATAAATAA
Protein sequence

>Msa1138320

MKGKKEISYSTQNALVPHAQHTKRACIAQTKDKGSVPCSYIPLEYHTTIAAKLNSLFKVIVFLTPTKKKKNKFKDK*