AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0422820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422820 MtrunA17_Chr3g0123391 95.247 526 23 2 1 526 1 524 0.0 1009
Msa0422820 MtrunA17_Chr3g0096561 47.159 176 77 5 288 459 645 808 3.71e-36 143
Msa0422820 MtrunA17_Chr3g0096561 34.722 216 106 6 20 232 179 362 3.39e-24 107
Msa0422820 MtrunA17_Chr2g0304041 40.278 216 104 7 288 493 648 848 6.83e-35 139
Msa0422820 MtrunA17_Chr2g0304041 36.723 177 84 4 59 232 209 360 7.25e-24 105
Msa0422820 MtrunA17_Chr8g0385721 46.575 146 66 1 333 478 799 932 7.11e-35 139
Msa0422820 MtrunA17_Chr7g0221461 43.243 185 80 5 294 475 626 788 1.41e-34 138
Msa0422820 MtrunA17_Chr3g0131631 46.575 146 66 1 333 478 791 924 2.69e-34 138
Msa0422820 MtrunA17_Chr4g0035711 46.043 139 72 2 330 465 181 319 2.92e-29 118
Msa0422820 MtrunA17_Chr5g0424411 43.269 104 52 2 336 433 73 175 9.25e-21 90.5
Msa0422820 MtrunA17_Chr5g0428671 57.143 70 29 1 150 219 44 112 3.70e-19 83.2
Msa0422820 MtrunA17_Chr5g0423961 54.286 70 31 1 150 219 44 112 6.48e-18 79.7
Msa0422820 MtrunA17_Chr7g0276291 43.956 91 49 1 379 467 5 95 1.46e-17 80.1
Msa0422820 MtrunA17_Chr7g0276301 26.519 181 106 7 45 222 104 260 1.73e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422820 AT3G26120.1 45.527 503 217 14 42 505 101 585 1.69e-128 388
Msa0422820 AT1G67770.1 41.060 453 202 12 42 475 75 481 1.01e-101 316
Msa0422820 AT5G61960.7 50.000 148 58 3 333 478 734 867 3.45e-37 147
Msa0422820 AT5G61960.4 50.000 148 58 3 333 478 734 867 3.45e-37 147
Msa0422820 AT5G61960.8 50.000 148 58 3 333 478 734 867 3.45e-37 147
Msa0422820 AT5G61960.11 50.000 148 58 3 333 478 734 867 3.45e-37 147
Msa0422820 AT5G61960.6 50.000 148 58 3 333 478 734 867 3.45e-37 147
Msa0422820 AT5G61960.9 50.000 148 58 3 333 478 734 867 3.45e-37 147
Msa0422820 AT5G61960.5 50.000 148 58 3 333 478 734 867 3.45e-37 147
Msa0422820 AT5G61960.3 50.000 148 58 3 333 478 741 874 3.68e-37 147
Msa0422820 AT5G61960.1 50.000 148 58 3 333 478 741 874 3.68e-37 147
Msa0422820 AT5G61960.10 50.000 148 58 3 333 478 741 874 3.68e-37 147
Msa0422820 AT5G61960.2 50.000 148 58 3 333 478 741 874 3.68e-37 147
Msa0422820 AT5G07290.1 48.649 148 60 3 333 478 739 872 5.18e-36 143
Msa0422820 AT5G07290.1 32.680 153 80 4 69 221 234 363 1.74e-15 80.1
Msa0422820 AT1G37140.1 49.242 132 59 2 335 465 83 207 2.16e-34 130
Msa0422820 AT1G29400.1 47.482 139 61 1 326 464 643 769 4.99e-33 134
Msa0422820 AT1G29400.1 33.636 220 105 7 10 226 145 326 4.96e-21 97.4
Msa0422820 AT1G29400.2 47.482 139 61 1 326 464 643 769 4.99e-33 134
Msa0422820 AT1G29400.2 33.636 220 105 7 10 226 145 326 4.96e-21 97.4
Msa0422820 AT1G29400.3 47.482 139 61 1 326 464 643 769 4.99e-33 134
Msa0422820 AT1G29400.3 33.636 220 105 7 10 226 145 326 4.96e-21 97.4
Msa0422820 AT5G07930.1 35.912 181 108 4 297 476 100 273 7.74e-28 113
Msa0422820 AT5G07930.3 36.313 179 106 4 299 476 102 273 9.07e-28 113
Msa0422820 AT5G07930.2 36.691 139 83 2 297 434 100 234 2.43e-23 99.8
Msa0422820 AT2G42890.1 34.426 183 97 4 45 226 196 356 3.84e-23 104
Msa0422820 AT2G42890.1 41.727 139 68 3 321 458 664 790 5.79e-23 103
Msa0422820 AT2G42890.3 34.426 183 97 4 45 226 183 343 4.26e-23 103
Msa0422820 AT2G42890.3 41.727 139 68 3 321 458 651 777 6.42e-23 103
Msa0422820 AT2G42890.2 34.426 183 97 4 45 226 183 343 4.26e-23 103
Msa0422820 AT2G42890.2 41.727 139 68 3 321 458 651 777 6.42e-23 103
Msa0422820 AT1G37140.2 45.349 86 46 1 381 465 91 176 2.32e-17 81.3

Find 169 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGGAGCAGTAGGGTTTA+AGG 0.136392 3_2:+72316631 None:intergenic
GGATTAGAATGAAATGATTT+TGG 0.200138 3_2:+72315751 None:intergenic
GTAGCGGCGTGGGGAAAATT+TGG 0.206226 3_2:+72316285 None:intergenic
AATGATTATAGGAGCAATTA+AGG 0.224880 3_2:-72315911 Msa0422820:intron
TCTTTACGTAGGTCAGTTTC+AGG 0.224982 3_2:+72316470 None:intergenic
TTACTAAACTCAATAGTAAT+TGG 0.237341 3_2:+72315775 None:intergenic
GGATTAAGGTTGAAATTAAA+TGG 0.265370 3_2:+72315706 None:intergenic
CGTAAAGACCTTTCGGCTTT+CGG 0.268540 3_2:-72316455 Msa0422820:CDS
AACAAATGCAACGTGGGATA+TGG 0.304008 3_2:-72314842 Msa0422820:CDS
GTCAGTTTCAGGGGTGGGAG+GGG 0.315198 3_2:+72316481 None:intergenic
GTTTCAGGGGTGGGAGGGGC+AGG 0.322616 3_2:+72316485 None:intergenic
GGGAAAGCGCTTGGAGTTGG+AGG 0.325471 3_2:-72315516 Msa0422820:CDS
GTTCAAAGTAGAGAGAGTTT+TGG 0.328298 3_2:-72315538 Msa0422820:CDS
TTGAATGGCAAAGAGATTAA+TGG 0.333735 3_2:-72315802 Msa0422820:CDS
CCACAATAGGATTGGTTCAA+TGG 0.341291 3_2:-72315599 Msa0422820:CDS
GCGGCGAAGGAGGTGGATTA+AGG 0.344445 3_2:+72315692 None:intergenic
CCGCTACCTCCGCCGCCGCC+AGG 0.349970 3_2:-72316269 Msa0422820:CDS
TTTATCATGAGAGTCGTTCT+AGG 0.352179 3_2:+72315427 None:intergenic
GGTATGGGAATGTAGTTGTT+TGG 0.353379 3_2:+72316602 None:intergenic
CGGCGGCGGCGTGACGGCAT+AGG 0.357948 3_2:+72316547 None:intergenic
ATAAGAGTTTGACATTTAAC+CGG 0.373048 3_2:-72315627 Msa0422820:CDS
TGGAAGAAGGTCAAGATCAT+AGG 0.376422 3_2:-72313058 Msa0422820:CDS
AGGTCAGTTTCAGGGGTGGG+AGG 0.380294 3_2:+72316479 None:intergenic
ATTACTTACTTAAAATCTAT+AGG 0.386154 3_2:+72315180 None:intergenic
TTAACCGGGTAAACCACAAT+AGG 0.393493 3_2:-72315612 Msa0422820:CDS
GCGGCGGAGGTAGCGGCGTG+GGG 0.403278 3_2:+72316276 None:intergenic
ATGTTCCCCGCCACTGGAAT+TGG 0.407737 3_2:+72313119 None:intergenic
TAGCGGCGTGGGGAAAATTT+GGG 0.411228 3_2:+72316286 None:intergenic
GTATGGGAATGTAGTTGTTT+GGG 0.413782 3_2:+72316603 None:intergenic
GCGGGGAACATGCTACAAAT+TGG 0.413975 3_2:-72313107 Msa0422820:CDS
CGGCGGCGGAGGTAGCGGCG+TGG 0.416539 3_2:+72316274 None:intergenic
GAGAATAGAGCGGGTGGGTA+TGG 0.419463 3_2:+72316514 None:intergenic
TGACCTACGTAAAGACCTTT+CGG 0.422014 3_2:-72316462 Msa0422820:CDS
CCTGGCGGCGGCGGAGGTAG+CGG 0.423978 3_2:+72316269 None:intergenic
GGGTTAAACTCTGGAGCAGT+AGG 0.431326 3_2:+72316623 None:intergenic
GGCGGCGGAGGTAGCGGCGT+GGG 0.432774 3_2:+72316275 None:intergenic
AAAGCGCTTGGAGTTGGAGG+GGG 0.435867 3_2:-72315513 Msa0422820:CDS
GGGTGGGAGGGGCAGGACTA+AGG 0.436139 3_2:+72316492 None:intergenic
ACGAGACCTGGCGGCGGCGG+AGG 0.436363 3_2:+72316263 None:intergenic
CACAATAGGATTGGTTCAAT+GGG 0.438115 3_2:-72315598 Msa0422820:CDS
GGCATAGGGTGGGTAGGGGT+AGG 0.442789 3_2:+72316562 None:intergenic
GGCCTTCCAGCACCAACATT+GGG 0.443227 3_2:-72314774 Msa0422820:CDS
CGACATAAGAGATGCTGAAA+AGG 0.443358 3_2:-72315836 Msa0422820:CDS
AAAGACGGACCTGTATTTGT+TGG 0.443856 3_2:+72315396 None:intergenic
CTTTACGTAGGTCAGTTTCA+GGG 0.451037 3_2:+72316471 None:intergenic
AAGACGGACCTGTATTTGTT+GGG 0.452268 3_2:+72315397 None:intergenic
TGGTTCAATGGGTTCATTGA+AGG 0.454062 3_2:-72315587 Msa0422820:CDS
ACAAAGTCATAGGAGGATAA+AGG 0.456334 3_2:+72315210 None:intergenic
AAAACATACCCAACAAATAC+AGG 0.458427 3_2:-72315405 Msa0422820:intron
CGACGTCGCGGCGAAGGAGG+TGG 0.458453 3_2:+72315685 None:intergenic
TGTAGCATGTTCCCCGCCAC+TGG 0.459934 3_2:+72313113 None:intergenic
CGTAGGTCAGTTTCAGGGGT+GGG 0.460430 3_2:+72316476 None:intergenic
GAAGTTACTGTTGAATATGC+TGG 0.460681 3_2:-72315277 Msa0422820:CDS
GTGACGGCATAGGGTGGGTA+GGG 0.463074 3_2:+72316557 None:intergenic
GGTCAGTTTCAGGGGTGGGA+GGG 0.466540 3_2:+72316480 None:intergenic
CGTCTAAATTGAAAACAACT+AGG 0.466558 3_2:+72316183 None:intergenic
ATACCGACGGCGACTGGTAT+GGG 0.467858 3_2:+72316587 None:intergenic
CTTATTAGAGATGTAAGCAT+TGG 0.469382 3_2:+72315729 None:intergenic
GAAAGCGCTTGGAGTTGGAG+GGG 0.473295 3_2:-72315514 Msa0422820:CDS
GCGACGAGACCTGGCGGCGG+CGG 0.473759 3_2:+72316260 None:intergenic
CGTGACGGCATAGGGTGGGT+AGG 0.474152 3_2:+72316556 None:intergenic
TGACGGCATAGGGTGGGTAG+GGG 0.476410 3_2:+72316558 None:intergenic
GGGATACACCATGGAAGAAA+AGG 0.479864 3_2:-72315882 Msa0422820:CDS
AATAGAGCGGGTGGGTATGG+TGG 0.480624 3_2:+72316517 None:intergenic
TTATTAGAGATGTAAGCATT+GGG 0.483182 3_2:+72315730 None:intergenic
TTGGGGAAAGCGCTTGGAGT+TGG 0.484284 3_2:-72315519 Msa0422820:CDS
AGGAAGGTACACAAAGTCAT+AGG 0.485708 3_2:+72315200 None:intergenic
GGCGGCGGCGTGACGGCATA+GGG 0.486024 3_2:+72316548 None:intergenic
CTACTTTGAACTCTAACAAA+AGG 0.492457 3_2:+72315550 None:intergenic
GGCACACCGGCGACGAGACC+TGG 0.493166 3_2:+72316251 None:intergenic
AATACCGACGGCGACTGGTA+TGG 0.494952 3_2:+72316586 None:intergenic
TAGTTGTTTGGGTTAAACTC+TGG 0.495392 3_2:+72316614 None:intergenic
AGACCTCCCAATGTTGGTGC+TGG 0.498744 3_2:+72314768 None:intergenic
CTCAAAGTTCCCGTGTGAGA+TGG 0.501576 3_2:-72313198 Msa0422820:CDS
CAATCCTATTGTGGTTTACC+CGG 0.502060 3_2:+72315608 None:intergenic
TAGGGAATACCGACGGCGAC+TGG 0.502108 3_2:+72316581 None:intergenic
ACGGAGCCAATTCCAGTGGC+GGG 0.502691 3_2:-72313125 Msa0422820:CDS
GGAAGAAGGTCAAGATCATA+GGG 0.510176 3_2:-72313057 Msa0422820:CDS
AAGGCTTTGAAAGAATTGAA+TGG 0.513360 3_2:-72315817 Msa0422820:CDS
GAAAATCGACGTCGCGGCGA+AGG 0.520038 3_2:+72315679 None:intergenic
GCATAGGGTGGGTAGGGGTA+GGG 0.522118 3_2:+72316563 None:intergenic
GGCGGCGTGACGGCATAGGG+TGG 0.523616 3_2:+72316551 None:intergenic
GGTTCAATGGGTTCATTGAA+GGG 0.524979 3_2:-72315586 Msa0422820:CDS
CGTCGCCGGTGTGCCACTGT+GGG 0.525073 3_2:-72316243 Msa0422820:CDS
ACGGAATGAGTCCGTTTGAA+CGG 0.525732 3_2:+72316421 None:intergenic
TAGAATCTTAGCGTTGCCTC+AGG 0.525923 3_2:+72314800 None:intergenic
CAGTATCAGCCAGTACATAG+TGG 0.526463 3_2:+72316219 None:intergenic
CCATTGAACCAATCCTATTG+TGG 0.528406 3_2:+72315599 None:intergenic
ACTGTGGGCCCACTATGTAC+TGG 0.528695 3_2:-72316228 Msa0422820:CDS
AGGCCTTCCAGCACCAACAT+TGG 0.531003 3_2:-72314775 Msa0422820:CDS
TAGGAGCAATTAAGGAAGTG+AGG 0.533444 3_2:-72315903 Msa0422820:CDS
CGAAGTCAGAGCCGTTCAAA+CGG 0.533758 3_2:-72316432 Msa0422820:CDS
CGGGTAAACCACAATAGGAT+TGG 0.535306 3_2:-72315607 Msa0422820:CDS
CTCCCAATGTTGGTGCTGGA+AGG 0.535713 3_2:+72314772 None:intergenic
CCGCCGCCAGGTCTCGTCGC+CGG 0.539793 3_2:-72316257 Msa0422820:CDS
TGCAATGAGCAGCTAGGCGA+CGG 0.544239 3_2:-72315237 Msa0422820:CDS
GGAAAGCGCTTGGAGTTGGA+GGG 0.544494 3_2:-72315515 Msa0422820:CDS
GCGGCGTGACGGCATAGGGT+GGG 0.552470 3_2:+72316552 None:intergenic
AGGAGCAATTAAGGAAGTGA+GGG 0.556032 3_2:-72315902 Msa0422820:CDS
TAGATGCGGCGGCGGCGTGA+CGG 0.556131 3_2:+72316541 None:intergenic
TAAGAGTTTGACATTTAACC+GGG 0.558889 3_2:-72315626 Msa0422820:CDS
ATGGTGGATAGATGCGGCGG+CGG 0.559637 3_2:+72316533 None:intergenic
ACGTAGGTCAGTTTCAGGGG+TGG 0.561271 3_2:+72316475 None:intergenic
AAAATTTGGGAATAAGAAAG+AGG 0.561489 3_2:+72316299 None:intergenic
GTCTAAATTGAAAACAACTA+GGG 0.568866 3_2:+72316184 None:intergenic
GTAGCTGATGAGATGGAAGA+AGG 0.569726 3_2:-72313071 Msa0422820:CDS
ACTCACATACGCAAGAGCTC+AGG 0.569935 3_2:-72314723 Msa0422820:intron
GTCAATTGTTTCCCATCTCG+AGG 0.569995 3_2:+72313146 None:intergenic
TTTACGTAGGTCAGTTTCAG+GGG 0.571001 3_2:+72316472 None:intergenic
GAAGGTCAAGATCATAGGGT+AGG 0.572001 3_2:-72313053 Msa0422820:CDS
AATTGTGGTGAATGAGGGCG+TGG 0.572208 3_2:+72315655 None:intergenic
GAGCAGTTATGACTCCGTTA+CGG 0.572447 3_2:+72316402 None:intergenic
AATCGACGTCGCGGCGAAGG+AGG 0.573751 3_2:+72315682 None:intergenic
CCGGCGACGAGACCTGGCGG+CGG 0.574051 3_2:+72316257 None:intergenic
AACTTGTCGCAGCTGATCAG+AGG 0.574469 3_2:+72316151 None:intergenic
TCGTCGCCGGTGTGCCACTG+TGG 0.575195 3_2:-72316244 Msa0422820:CDS
GGTTAAACTCTGGAGCAGTA+GGG 0.575682 3_2:+72316624 None:intergenic
CAAGATCATAGGGTAGGTAG+TGG 0.577368 3_2:-72313047 Msa0422820:CDS
TGAGATAATTGTGGTGAATG+AGG 0.579205 3_2:+72315649 None:intergenic
TGATATTAGACACGCAGAGA+CGG 0.582057 3_2:-72316372 Msa0422820:CDS
AGTTAAAGACCTCCCAATGT+TGG 0.586318 3_2:+72314762 None:intergenic
CTTACTTAAAATCTATAGGA+AGG 0.588507 3_2:+72315184 None:intergenic
GACGGAGCCAATTCCAGTGG+CGG 0.594560 3_2:-72313126 Msa0422820:CDS
GAGATAATTGTGGTGAATGA+GGG 0.596266 3_2:+72315650 None:intergenic
CTGGCTGATACTGAGAATCA+AGG 0.596496 3_2:-72316209 Msa0422820:CDS
AATACGCAGCACAGAGGACG+TGG 0.596568 3_2:+72316327 None:intergenic
GATCATAGGGTAGGTAGTGG+TGG 0.598738 3_2:-72313044 Msa0422820:CDS
TCCATCTCATCAGCTACAGA+AGG 0.601752 3_2:+72313077 None:intergenic
AGGACTAAGGAGAATAGAGC+GGG 0.604231 3_2:+72316505 None:intergenic
AAATTTGGGAATAAGAAAGA+GGG 0.608481 3_2:+72316300 None:intergenic
AGATAATGCTCCATCTCACA+CGG 0.611046 3_2:+72313188 None:intergenic
GAGCTCTTGCGTATGTGAGT+TGG 0.611712 3_2:+72314726 None:intergenic
GTGGGTATGGTGGATAGATG+CGG 0.612880 3_2:+72316527 None:intergenic
TCGAGATGGGAAACAATTGA+CGG 0.613818 3_2:-72313144 Msa0422820:CDS
TGACTTCGCCGAAAGCCGAA+AGG 0.617073 3_2:+72316447 None:intergenic
TCCTTCTGTAGCTGATGAGA+TGG 0.622229 3_2:-72313078 Msa0422820:CDS
GTACACTGCAATGAGCAGCT+AGG 0.623158 3_2:-72315243 Msa0422820:CDS
ACTAAGGAGAATAGAGCGGG+TGG 0.623589 3_2:+72316508 None:intergenic
AGTATCAGCCAGTACATAGT+GGG 0.624287 3_2:+72316220 None:intergenic
CGAGGTGGTGAAAACACCAC+TGG 0.627538 3_2:+72313164 None:intergenic
GTTCATTGAAGGGTGAAGAG+AGG 0.627589 3_2:-72315576 Msa0422820:CDS
AAGGTACACAAAGTCATAGG+AGG 0.633001 3_2:+72315203 None:intergenic
CGGAGCCAATTCCAGTGGCG+GGG 0.637866 3_2:-72313124 Msa0422820:CDS
GTGGGCCCACAGTGGCACAC+CGG 0.640125 3_2:+72316238 None:intergenic
TATAGGAACAAATGCAACGT+GGG 0.641721 3_2:-72314848 Msa0422820:intron
GGCAACGCTAAGATTCTACA+AGG 0.648560 3_2:-72314795 Msa0422820:CDS
GACGTGGTGAGTGCGAATAG+CGG 0.651850 3_2:+72316343 None:intergenic
AGGAAGTGAGGGATACACCA+TGG 0.653479 3_2:-72315891 Msa0422820:CDS
AATTGTTTCCCATCTCGAGG+TGG 0.655393 3_2:+72313149 None:intergenic
CTTCCAGCACCAACATTGGG+AGG 0.657486 3_2:-72314771 Msa0422820:CDS
CTAAGGAGAATAGAGCGGGT+GGG 0.672614 3_2:+72316509 None:intergenic
TGTGAATATGACATCTCCTG+AGG 0.673075 3_2:-72314816 Msa0422820:CDS
ATTCCCATACCAGTCGCCGT+CGG 0.681084 3_2:-72316590 Msa0422820:CDS
AAACTCTTATGAGATAATTG+TGG 0.683374 3_2:+72315640 None:intergenic
CAAACGGACTCATTCCGTAA+CGG 0.689626 3_2:-72316416 Msa0422820:CDS
TCTAGGATCAGATTCAACAA+TGG 0.693384 3_2:+72315444 None:intergenic
AAGCCGAAAGGTCTTTACGT+AGG 0.700365 3_2:+72316459 None:intergenic
CAGGACTAAGGAGAATAGAG+CGG 0.701567 3_2:+72316504 None:intergenic
CGTGGAGAAAATCGACGTCG+CGG 0.706607 3_2:+72315673 None:intergenic
GATAATGCTCCATCTCACAC+GGG 0.708028 3_2:+72313189 None:intergenic
ATTGACGGAGCCAATTCCAG+TGG 0.712659 3_2:-72313129 Msa0422820:CDS
GATGGAGCATTATCTGCCAG+TGG 0.712737 3_2:-72313180 Msa0422820:CDS
ACACCGGCGACGAGACCTGG+CGG 0.715350 3_2:+72316254 None:intergenic
GGTATGGTGGATAGATGCGG+CGG 0.718859 3_2:+72316530 None:intergenic
ATATAGGAACAAATGCAACG+TGG 0.745597 3_2:-72314849 Msa0422820:intron
AGTACATAGTGGGCCCACAG+TGG 0.755442 3_2:+72316230 None:intergenic
GGTTGAAATACGCAGCACAG+AGG 0.761263 3_2:+72316321 None:intergenic
GTAGGGGTAGGGAATACCGA+CGG 0.774683 3_2:+72316574 None:intergenic
GCTCATTGCAGTGTACACAG+TGG 0.859735 3_2:+72315250 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTTTTTAATGATTAT+AGG - chr3_2:72313690-72313709 Msa0422820:intron 10.0%
!!! TTATTTTATTATGTGAAATT+TGG - chr3_2:72314296-72314315 Msa0422820:intron 10.0%
!! TACATAATAATAAAATAATG+TGG + chr3_2:72314667-72314686 None:intergenic 10.0%
!! AAAAAATTTGAAAAAAAATC+AGG - chr3_2:72315483-72315502 Msa0422820:CDS 10.0%
!!! AATTCAAAATTTTACAAAAA+AGG - chr3_2:72315649-72315668 Msa0422820:CDS 10.0%
!! AAAAAATTTGAAAAAAAATC+AGG + chr3_2:72315483-72315502 None:intergenic 10.0%
!!! TGTATTTTTATTTATGAAAA+GGG - chr3_2:72316361-72316380 Msa0422820:CDS 10.0%
!! ATTACTTACTTAAAATCTAT+AGG + chr3_2:72314435-72314454 None:intergenic 15.0%
!!! ATAAATTGGGATTTTAAATT+TGG + chr3_2:72316093-72316112 None:intergenic 15.0%
!!! GGAATTTTTTTTTTAAAATC+TGG - chr3_2:72315504-72315523 Msa0422820:CDS 15.0%
!!! AAAAAGATTTTACAAAATTC+AGG - chr3_2:72315594-72315613 Msa0422820:CDS 15.0%
!!! AAAAAGATTTTACAAAATTC+AGG + chr3_2:72315594-72315613 None:intergenic 15.0%
!!! GGAATTTTTTTTTTAAAATC+TGG + chr3_2:72315504-72315523 None:intergenic 15.0%
!!! ATAAATTGGGATTTTAAATT+TGG - chr3_2:72316093-72316112 Msa0422820:intron 15.0%
!!! GTGTATTTTTATTTATGAAA+AGG - chr3_2:72316360-72316379 Msa0422820:CDS 15.0%
!! AAAGAATGAAAAAGCTTAAT+AGG - chr3_2:72313601-72313620 Msa0422820:intron 20.0%
!! TTACTAAACTCAATAGTAAT+TGG + chr3_2:72313840-72313859 None:intergenic 20.0%
!! TAATGCACATTAAAAAAAGA+CGG + chr3_2:72314234-72314253 None:intergenic 20.0%
!! TCTACCAAAAAAACAATAAT+GGG + chr3_2:72314474-72314493 None:intergenic 20.0%
!! ATCTACCAAAAAAACAATAA+TGG + chr3_2:72314475-72314494 None:intergenic 20.0%
!! AATAATATACTGCTACTATA+CGG + chr3_2:72314697-72314716 None:intergenic 20.0%
!! ATTATTATTTAGTGTTGTGA+TGG - chr3_2:72314711-72314730 Msa0422820:intron 20.0%
!! ACCACTACATTATATATATT+TGG - chr3_2:72314918-72314937 Msa0422820:intron 20.0%
!! ACCAAATATATATAATGTAG+TGG + chr3_2:72314922-72314941 None:intergenic 20.0%
!!! GATTTTAAATTTGGCATTAA+GGG + chr3_2:72316102-72316121 None:intergenic 20.0%
!!! AAATCTGGAAATGTTTTTTA+CGG - chr3_2:72315519-72315538 Msa0422820:CDS 20.0%
!!! AAATCTGGAAATGTTTTTTA+CGG + chr3_2:72315519-72315538 None:intergenic 20.0%
!!! GATTTTAAATTTGGCATTAA+GGG - chr3_2:72316102-72316121 Msa0422820:intron 20.0%
!!! TTTTATTTATGAAAAGGGTT+TGG - chr3_2:72316366-72316385 Msa0422820:CDS 20.0%
! AAATTTGGGAATAAGAAAGA+GGG + chr3_2:72313315-72313334 None:intergenic 25.0%
! AAAATTTGGGAATAAGAAAG+AGG + chr3_2:72313316-72313335 None:intergenic 25.0%
! GTCTAAATTGAAAACAACTA+GGG + chr3_2:72313431-72313450 None:intergenic 25.0%
!!! TCTCATTTCTGAAACATAAA+AGG + chr3_2:72313549-72313568 None:intergenic 25.0%
! AAACATGAATGAGTAAAAGT+GGG + chr3_2:72313661-72313680 None:intergenic 25.0%
! AAAACATGAATGAGTAAAAG+TGG + chr3_2:72313662-72313681 None:intergenic 25.0%
! AATGATTATAGGAGCAATTA+AGG - chr3_2:72313701-72313720 Msa0422820:intron 25.0%
!! GGATTAGAATGAAATGATTT+TGG + chr3_2:72313864-72313883 None:intergenic 25.0%
! TTATTAGAGATGTAAGCATT+GGG + chr3_2:72313885-72313904 None:intergenic 25.0%
! GGATTAAGGTTGAAATTAAA+TGG + chr3_2:72313909-72313928 None:intergenic 25.0%
! AAACTCTTATGAGATAATTG+TGG + chr3_2:72313975-72313994 None:intergenic 25.0%
! ATAAGAGTTTGACATTTAAC+CGG - chr3_2:72313985-72314004 Msa0422820:intron 25.0%
! CTTACTTAAAATCTATAGGA+AGG + chr3_2:72314431-72314450 None:intergenic 25.0%
!! AAAAACAATAATGGGACATA+AGG + chr3_2:72314466-72314485 None:intergenic 25.0%
!!! ATGTCCCATTATTGTTTTTT+TGG - chr3_2:72314467-72314486 Msa0422820:intron 25.0%
! TTTAAGTAAAAAACCGTGAT+CGG + chr3_2:72314550-72314569 None:intergenic 25.0%
!!! CATTTGAGTTAGAATTTTTG+AGG - chr3_2:72314587-72314606 Msa0422820:intron 25.0%
! ATGACAAATCTGTGATATAT+AGG - chr3_2:72314747-72314766 Msa0422820:CDS 25.0%
! CTGTTACAAAACAAACTTAA+AGG + chr3_2:72316181-72316200 None:intergenic 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG - chr3_2:72315051-72315070 Msa0422820:intron 25.0%
! GTTACAAACATCAAACTTAA+AGG + chr3_2:72315078-72315097 None:intergenic 25.0%
! GTTTGATGTTTGTAACATAT+AGG - chr3_2:72315082-72315101 Msa0422820:intron 25.0%
! CTGTTACAAAACAAACTTAA+AGG + chr3_2:72316181-72316200 None:intergenic 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG - chr3_2:72315051-72315070 Msa0422820:intron 25.0%
! ATTACAAACGTCAAACTTAA+AGG + chr3_2:72316152-72316171 None:intergenic 25.0%
!! GGATTTTAAATTTGGCATTA+AGG + chr3_2:72316101-72316120 None:intergenic 25.0%
!! TTTTACGGATTTAGTCAAAA+TGG - chr3_2:72315534-72315553 Msa0422820:CDS 25.0%
!! TTTTACGGATTTAGTCAAAA+TGG + chr3_2:72315534-72315553 None:intergenic 25.0%
!! GGATTTTAAATTTGGCATTA+AGG - chr3_2:72316101-72316120 Msa0422820:intron 25.0%
! ATTACAAACGTCAAACTTAA+AGG - chr3_2:72316152-72316171 Msa0422820:CDS 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG + chr3_2:72315051-72315070 None:intergenic 25.0%
! CTGTTACAAAACAAACTTAA+AGG - chr3_2:72316181-72316200 Msa0422820:CDS 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG + chr3_2:72315051-72315070 None:intergenic 25.0%
! CTGTTACAAAACAAACTTAA+AGG - chr3_2:72316181-72316200 Msa0422820:CDS 25.0%
! TATATAGTATCGTTATGTGA+CGG + chr3_2:72316316-72316335 None:intergenic 25.0%
CGTCTAAATTGAAAACAACT+AGG + chr3_2:72313432-72313451 None:intergenic 30.0%
AACATGAATGAGTAAAAGTG+GGG + chr3_2:72313660-72313679 None:intergenic 30.0%
!! AAGGCTTTGAAAGAATTGAA+TGG - chr3_2:72313795-72313814 Msa0422820:intron 30.0%
TTGAATGGCAAAGAGATTAA+TGG - chr3_2:72313810-72313829 Msa0422820:intron 30.0%
CTTATTAGAGATGTAAGCAT+TGG + chr3_2:72313886-72313905 None:intergenic 30.0%
TAAGAGTTTGACATTTAACC+GGG - chr3_2:72313986-72314005 Msa0422820:intron 30.0%
CTACTTTGAACTCTAACAAA+AGG + chr3_2:72314065-72314084 None:intergenic 30.0%
! TTCAAAGTAGAGAGAGTTTT+GGG - chr3_2:72314075-72314094 Msa0422820:intron 30.0%
AAAACATACCCAACAAATAC+AGG - chr3_2:72314207-72314226 Msa0422820:intron 30.0%
GTTACAAACGTCAAACTTAA+AGG + chr3_2:72316272-72316291 None:intergenic 30.0%
GTTTGACGTTTGTAACATAT+AGG - chr3_2:72315022-72315041 Msa0422820:intron 30.0%
!!! TTTGGCATTAAGGGTATTTT+GGG + chr3_2:72316111-72316130 None:intergenic 30.0%
!!! ATTTGGCATTAAGGGTATTT+TGG + chr3_2:72316110-72316129 None:intergenic 30.0%
!!! ATTTGGCATTAAGGGTATTT+TGG - chr3_2:72316110-72316129 Msa0422820:intron 30.0%
!!! TTTGGCATTAAGGGTATTTT+GGG - chr3_2:72316111-72316130 Msa0422820:intron 30.0%
! GTTTGAGGTTTGTAACATAT+AGG + chr3_2:72316208-72316227 None:intergenic 30.0%
GTTACAAACCTCAAACTTAA+AGG - chr3_2:72316212-72316231 Msa0422820:CDS 30.0%
GTTTGACGTTTGTAACATAT+AGG + chr3_2:72315022-72315041 None:intergenic 30.0%
GTTACAAACGTCAAACTTAA+AGG - chr3_2:72316272-72316291 Msa0422820:CDS 30.0%
! TAGTTGTTTGGGTTAAACTC+TGG + chr3_2:72313001-72313020 None:intergenic 35.0%
GTATGGGAATGTAGTTGTTT+GGG + chr3_2:72313012-72313031 None:intergenic 35.0%
!!! CGACAAGTTTTTGAAGCTTT+TGG - chr3_2:72313475-72313494 Msa0422820:intron 35.0%
! GAAAAGGAATCAGAGTTTTG+TGG - chr3_2:72313746-72313765 Msa0422820:intron 35.0%
GAGATAATTGTGGTGAATGA+GGG + chr3_2:72313965-72313984 None:intergenic 35.0%
TGAGATAATTGTGGTGAATG+AGG + chr3_2:72313966-72313985 None:intergenic 35.0%
!! CACAATAGGATTGGTTCAAT+GGG - chr3_2:72314014-72314033 Msa0422820:intron 35.0%
! GTTCAAAGTAGAGAGAGTTT+TGG - chr3_2:72314074-72314093 Msa0422820:intron 35.0%
! TCAAAGTAGAGAGAGTTTTG+GGG - chr3_2:72314076-72314095 Msa0422820:intron 35.0%
! TCTAGGATCAGATTCAACAA+TGG + chr3_2:72314171-72314190 None:intergenic 35.0%
TTTATCATGAGAGTCGTTCT+AGG + chr3_2:72314188-72314207 None:intergenic 35.0%
GAAGTTACTGTTGAATATGC+TGG - chr3_2:72314335-72314354 Msa0422820:intron 35.0%
ACAAAGTCATAGGAGGATAA+AGG + chr3_2:72314405-72314424 None:intergenic 35.0%
! ACTCGACTTCCAATTTTTGT+CGG + chr3_2:72314519-72314538 None:intergenic 35.0%
!! AATTTTTGAGGATAGCGCTT+AGG - chr3_2:72314599-72314618 Msa0422820:intron 35.0%
ATATAGGAACAAATGCAACG+TGG - chr3_2:72314763-72314782 Msa0422820:CDS 35.0%
TATAGGAACAAATGCAACGT+GGG - chr3_2:72314764-72314783 Msa0422820:CDS 35.0%
ATAAGGCTTAATTACACCAC+AGG - chr3_2:72314991-72315010 Msa0422820:intron 35.0%
! AGATAGGTCCTTTAAGTTTG+AGG + chr3_2:72315067-72315086 None:intergenic 35.0%
GGTATGGGAATGTAGTTGTT+TGG + chr3_2:72313013-72313032 None:intergenic 40.0%
TTTACGTAGGTCAGTTTCAG+GGG + chr3_2:72313143-72313162 None:intergenic 40.0%
CTTTACGTAGGTCAGTTTCA+GGG + chr3_2:72313144-72313163 None:intergenic 40.0%
TCTTTACGTAGGTCAGTTTC+AGG + chr3_2:72313145-72313164 None:intergenic 40.0%
TGACCTACGTAAAGACCTTT+CGG - chr3_2:72313150-72313169 Msa0422820:CDS 40.0%
TGATATTAGACACGCAGAGA+CGG - chr3_2:72313240-72313259 Msa0422820:intron 40.0%
AGTATCAGCCAGTACATAGT+GGG + chr3_2:72313395-72313414 None:intergenic 40.0%
TAGGAGCAATTAAGGAAGTG+AGG - chr3_2:72313709-72313728 Msa0422820:intron 40.0%
AGGAGCAATTAAGGAAGTGA+GGG - chr3_2:72313710-72313729 Msa0422820:intron 40.0%
! CTCTGATTCCTTTTCTTCCA+TGG + chr3_2:72313741-72313760 None:intergenic 40.0%
CGACATAAGAGATGCTGAAA+AGG - chr3_2:72313776-72313795 Msa0422820:intron 40.0%
TTAACCGGGTAAACCACAAT+AGG - chr3_2:72314000-72314019 Msa0422820:intron 40.0%
CAATCCTATTGTGGTTTACC+CGG + chr3_2:72314007-72314026 None:intergenic 40.0%
CCATTGAACCAATCCTATTG+TGG + chr3_2:72314016-72314035 None:intergenic 40.0%
!! CCACAATAGGATTGGTTCAA+TGG - chr3_2:72314013-72314032 Msa0422820:intron 40.0%
! TGGTTCAATGGGTTCATTGA+AGG - chr3_2:72314025-72314044 Msa0422820:intron 40.0%
! GGTTCAATGGGTTCATTGAA+GGG - chr3_2:72314026-72314045 Msa0422820:intron 40.0%
AAGACGGACCTGTATTTGTT+GGG + chr3_2:72314218-72314237 None:intergenic 40.0%
AAAGACGGACCTGTATTTGT+TGG + chr3_2:72314219-72314238 None:intergenic 40.0%
AAGGTACACAAAGTCATAGG+AGG + chr3_2:72314412-72314431 None:intergenic 40.0%
! AGGAAGGTACACAAAGTCAT+AGG + chr3_2:72314415-72314434 None:intergenic 40.0%
GGTAGATAGACGATGAACTT+CGG - chr3_2:72314488-72314507 Msa0422820:intron 40.0%
CGAGTTTCAAATACCGATCA+CGG - chr3_2:72314534-72314553 Msa0422820:intron 40.0%
TATACTGCTACTATACGGCA+CGG + chr3_2:72314692-72314711 None:intergenic 40.0%
AACAAATGCAACGTGGGATA+TGG - chr3_2:72314770-72314789 Msa0422820:CDS 40.0%
TGTGAATATGACATCTCCTG+AGG - chr3_2:72314796-72314815 Msa0422820:CDS 40.0%
AGTTAAAGACCTCCCAATGT+TGG + chr3_2:72314853-72314872 None:intergenic 40.0%
! TGACTTACTCATGTGGACTA+TGG + chr3_2:72314970-72314989 None:intergenic 40.0%
CCTTATGTGACTTACTCATG+TGG + chr3_2:72314977-72314996 None:intergenic 40.0%
CCACATGAGTAAGTCACATA+AGG - chr3_2:72314974-72314993 Msa0422820:intron 40.0%
AGATAATGCTCCATCTCACA+CGG + chr3_2:72316427-72316446 None:intergenic 40.0%
TCGAGATGGGAAACAATTGA+CGG - chr3_2:72316468-72316487 Msa0422820:CDS 40.0%
TGGAAGAAGGTCAAGATCAT+AGG - chr3_2:72316554-72316573 Msa0422820:CDS 40.0%
GGAAGAAGGTCAAGATCATA+GGG - chr3_2:72316555-72316574 Msa0422820:CDS 40.0%
!! GGTTAAACTCTGGAGCAGTA+GGG + chr3_2:72312991-72313010 None:intergenic 45.0%
AGGACTAAGGAGAATAGAGC+GGG + chr3_2:72313110-72313129 None:intergenic 45.0%
CAGGACTAAGGAGAATAGAG+CGG + chr3_2:72313111-72313130 None:intergenic 45.0%
AAGCCGAAAGGTCTTTACGT+AGG + chr3_2:72313156-72313175 None:intergenic 45.0%
CGTAAAGACCTTTCGGCTTT+CGG - chr3_2:72313157-72313176 Msa0422820:CDS 45.0%
ACGGAATGAGTCCGTTTGAA+CGG + chr3_2:72313194-72313213 None:intergenic 45.0%
! CAAACGGACTCATTCCGTAA+CGG - chr3_2:72313196-72313215 Msa0422820:CDS 45.0%
GAGCAGTTATGACTCCGTTA+CGG + chr3_2:72313213-72313232 None:intergenic 45.0%
CAGTATCAGCCAGTACATAG+TGG + chr3_2:72313396-72313415 None:intergenic 45.0%
CTGGCTGATACTGAGAATCA+AGG - chr3_2:72313403-72313422 Msa0422820:intron 45.0%
GGGATACACCATGGAAGAAA+AGG - chr3_2:72313730-72313749 Msa0422820:intron 45.0%
CGGGTAAACCACAATAGGAT+TGG - chr3_2:72314005-72314024 Msa0422820:intron 45.0%
GTTCATTGAAGGGTGAAGAG+AGG - chr3_2:72314036-72314055 Msa0422820:intron 45.0%
TCGGAAGCTCCGACAAAAAT+TGG - chr3_2:72314507-72314526 Msa0422820:intron 45.0%
! TCCAAGTGCTACCCAACTTT+TGG - chr3_2:72314634-72314653 Msa0422820:intron 45.0%
TCCAAAAGTTGGGTAGCACT+TGG + chr3_2:72314638-72314657 None:intergenic 45.0%
GTGGCACAAGTCCAAAAGTT+GGG + chr3_2:72314648-72314667 None:intergenic 45.0%
TGTGGCACAAGTCCAAAAGT+TGG + chr3_2:72314649-72314668 None:intergenic 45.0%
ATACTGCTACTATACGGCAC+GGG + chr3_2:72314691-72314710 None:intergenic 45.0%
TAGAATCTTAGCGTTGCCTC+AGG + chr3_2:72314815-72314834 None:intergenic 45.0%
GGCAACGCTAAGATTCTACA+AGG - chr3_2:72314817-72314836 Msa0422820:CDS 45.0%
CGTCAAACTTAAAGGACCTG+TGG + chr3_2:72316280-72316299 None:intergenic 45.0%
CGTCAAACTTAAAGGACCTG+TGG - chr3_2:72316280-72316299 Msa0422820:CDS 45.0%
TGACGGCTTAATTACACCAC+AGG + chr3_2:72316299-72316318 None:intergenic 45.0%
GATAATGCTCCATCTCACAC+GGG + chr3_2:72316426-72316445 None:intergenic 45.0%
! TGTTTTCACCACCTCGAGAT+GGG - chr3_2:72316455-72316474 Msa0422820:CDS 45.0%
AATTGTTTCCCATCTCGAGG+TGG + chr3_2:72316466-72316485 None:intergenic 45.0%
GTCAATTGTTTCCCATCTCG+AGG + chr3_2:72316469-72316488 None:intergenic 45.0%
TCCTTCTGTAGCTGATGAGA+TGG - chr3_2:72316534-72316553 Msa0422820:CDS 45.0%
TCCATCTCATCAGCTACAGA+AGG + chr3_2:72316538-72316557 None:intergenic 45.0%
GTAGCTGATGAGATGGAAGA+AGG - chr3_2:72316541-72316560 Msa0422820:CDS 45.0%
GAAGGTCAAGATCATAGGGT+AGG - chr3_2:72316559-72316578 Msa0422820:CDS 45.0%
CAAGATCATAGGGTAGGTAG+TGG - chr3_2:72316565-72316584 Msa0422820:CDS 45.0%
GACGTGATGAGCAGAAAAAG+TGG - chr3_2:72316595-72316614 Msa0422820:CDS 45.0%
GTGATGAGCAGAAAAAGTGG+CGG - chr3_2:72316598-72316617 Msa0422820:CDS 45.0%
!!! TTTATTTTTGAAAATAAATT+GGG + chr3_2:72316080-72316099 None:intergenic 5.0%
!!! TTTTATTTTTGAAAATAAAT+TGG + chr3_2:72316079-72316098 None:intergenic 5.0%
!! ATAAAAAAAATCTAAAAAAT+TGG - chr3_2:72315225-72315244 Msa0422820:CDS 5.0%
!! ATAAAAAAAATCTAAAAAAT+TGG - chr3_2:72315225-72315244 Msa0422820:CDS 5.0%
!! ATAAAAAAAATCTAAAAAAT+TGG + chr3_2:72315225-72315244 None:intergenic 5.0%
!! ATAAAAAAAATCTAAAAAAT+TGG + chr3_2:72315225-72315244 None:intergenic 5.0%
!!! TTTTATTTTTGAAAATAAAT+TGG - chr3_2:72316079-72316098 Msa0422820:intron 5.0%
!!! TTTATTTTTGAAAATAAATT+GGG - chr3_2:72316080-72316099 Msa0422820:intron 5.0%
!! CTCTGGAGCAGTAGGGTTTA+AGG + chr3_2:72312984-72313003 None:intergenic 50.0%
!! GGGTTAAACTCTGGAGCAGT+AGG + chr3_2:72312992-72313011 None:intergenic 50.0%
!! GTGGGTATGGTGGATAGATG+CGG + chr3_2:72313088-72313107 None:intergenic 50.0%
CTAAGGAGAATAGAGCGGGT+GGG + chr3_2:72313106-72313125 None:intergenic 50.0%
ACTAAGGAGAATAGAGCGGG+TGG + chr3_2:72313107-72313126 None:intergenic 50.0%
CGAAGTCAGAGCCGTTCAAA+CGG - chr3_2:72313180-72313199 Msa0422820:CDS 50.0%
GGTTGAAATACGCAGCACAG+AGG + chr3_2:72313294-72313313 None:intergenic 50.0%
TAGCGGCGTGGGGAAAATTT+GGG + chr3_2:72313329-72313348 None:intergenic 50.0%
AACTTGTCGCAGCTGATCAG+AGG + chr3_2:72313464-72313483 None:intergenic 50.0%
AGGAAGTGAGGGATACACCA+TGG - chr3_2:72313721-72313740 Msa0422820:intron 50.0%
AATTGTGGTGAATGAGGGCG+TGG + chr3_2:72313960-72313979 None:intergenic 50.0%
!!! AGAGTTTTGGGGAAAGCGCT+TGG - chr3_2:72314087-72314106 Msa0422820:intron 50.0%
GCTCATTGCAGTGTACACAG+TGG + chr3_2:72314365-72314384 None:intergenic 50.0%
GTACACTGCAATGAGCAGCT+AGG - chr3_2:72314369-72314388 Msa0422820:intron 50.0%
GAGCTCTTGCGTATGTGAGT+TGG + chr3_2:72314889-72314908 None:intergenic 50.0%
ACTCACATACGCAAGAGCTC+AGG - chr3_2:72314889-72314908 Msa0422820:intron 50.0%
CTCAAAGTTCCCGTGTGAGA+TGG - chr3_2:72316414-72316433 Msa0422820:CDS 50.0%
! GATGGAGCATTATCTGCCAG+TGG - chr3_2:72316432-72316451 Msa0422820:CDS 50.0%
! GTGTTTTCACCACCTCGAGA+TGG - chr3_2:72316454-72316473 Msa0422820:CDS 50.0%
ATTGACGGAGCCAATTCCAG+TGG - chr3_2:72316483-72316502 Msa0422820:CDS 50.0%
GCGGGGAACATGCTACAAAT+TGG - chr3_2:72316505-72316524 Msa0422820:CDS 50.0%
! GATCATAGGGTAGGTAGTGG+TGG - chr3_2:72316568-72316587 Msa0422820:CDS 50.0%
AGCAGAAAAAGTGGCGGCAT+AGG - chr3_2:72316604-72316623 Msa0422820:CDS 50.0%
ATTCCCATACCAGTCGCCGT+CGG - chr3_2:72313022-72313041 Msa0422820:CDS 55.0%
ATACCGACGGCGACTGGTAT+GGG + chr3_2:72313028-72313047 None:intergenic 55.0%
AATACCGACGGCGACTGGTA+TGG + chr3_2:72313029-72313048 None:intergenic 55.0%
GTAGGGGTAGGGAATACCGA+CGG + chr3_2:72313041-72313060 None:intergenic 55.0%
!! GGTATGGTGGATAGATGCGG+CGG + chr3_2:72313085-72313104 None:intergenic 55.0%
AATAGAGCGGGTGGGTATGG+TGG + chr3_2:72313098-72313117 None:intergenic 55.0%
GAGAATAGAGCGGGTGGGTA+TGG + chr3_2:72313101-72313120 None:intergenic 55.0%
CGTAGGTCAGTTTCAGGGGT+GGG + chr3_2:72313139-72313158 None:intergenic 55.0%
ACGTAGGTCAGTTTCAGGGG+TGG + chr3_2:72313140-72313159 None:intergenic 55.0%
TGACTTCGCCGAAAGCCGAA+AGG + chr3_2:72313168-72313187 None:intergenic 55.0%
GACGTGGTGAGTGCGAATAG+CGG + chr3_2:72313272-72313291 None:intergenic 55.0%
AATACGCAGCACAGAGGACG+TGG + chr3_2:72313288-72313307 None:intergenic 55.0%
GTAGCGGCGTGGGGAAAATT+TGG + chr3_2:72313330-72313349 None:intergenic 55.0%
!! AGTACATAGTGGGCCCACAG+TGG + chr3_2:72313385-72313404 None:intergenic 55.0%
ACTGTGGGCCCACTATGTAC+TGG - chr3_2:72313384-72313403 Msa0422820:intron 55.0%
CGTGGAGAAAATCGACGTCG+CGG + chr3_2:72313942-72313961 None:intergenic 55.0%
!! TTGGGGAAAGCGCTTGGAGT+TGG - chr3_2:72314093-72314112 Msa0422820:intron 55.0%
!! GGAAAGCGCTTGGAGTTGGA+GGG - chr3_2:72314097-72314116 Msa0422820:intron 55.0%
!! GAAAGCGCTTGGAGTTGGAG+GGG - chr3_2:72314098-72314117 Msa0422820:intron 55.0%
! AAAGCGCTTGGAGTTGGAGG+GGG - chr3_2:72314099-72314118 Msa0422820:intron 55.0%
TGCAATGAGCAGCTAGGCGA+CGG - chr3_2:72314375-72314394 Msa0422820:intron 55.0%
AGGCCTTCCAGCACCAACAT+TGG - chr3_2:72314837-72314856 Msa0422820:CDS 55.0%
GGCCTTCCAGCACCAACATT+GGG - chr3_2:72314838-72314857 Msa0422820:CDS 55.0%
!! CTCCCAATGTTGGTGCTGGA+AGG + chr3_2:72314843-72314862 None:intergenic 55.0%
CTTCCAGCACCAACATTGGG+AGG - chr3_2:72314841-72314860 Msa0422820:CDS 55.0%
AGACCTCCCAATGTTGGTGC+TGG + chr3_2:72314847-72314866 None:intergenic 55.0%
CGAGGTGGTGAAAACACCAC+TGG + chr3_2:72316451-72316470 None:intergenic 55.0%
ATGTTCCCCGCCACTGGAAT+TGG + chr3_2:72316496-72316515 None:intergenic 55.0%
TAGGGAATACCGACGGCGAC+TGG + chr3_2:72313034-72313053 None:intergenic 60.0%
GCATAGGGTGGGTAGGGGTA+GGG + chr3_2:72313052-72313071 None:intergenic 60.0%
TGACGGCATAGGGTGGGTAG+GGG + chr3_2:72313057-72313076 None:intergenic 60.0%
GTGACGGCATAGGGTGGGTA+GGG + chr3_2:72313058-72313077 None:intergenic 60.0%
!! ATGGTGGATAGATGCGGCGG+CGG + chr3_2:72313082-72313101 None:intergenic 60.0%
GTCAGTTTCAGGGGTGGGAG+GGG + chr3_2:72313134-72313153 None:intergenic 60.0%
GGTCAGTTTCAGGGGTGGGA+GGG + chr3_2:72313135-72313154 None:intergenic 60.0%
AGGTCAGTTTCAGGGGTGGG+AGG + chr3_2:72313136-72313155 None:intergenic 60.0%
!! GCGGCGAAGGAGGTGGATTA+AGG + chr3_2:72313923-72313942 None:intergenic 60.0%
GAAAATCGACGTCGCGGCGA+AGG + chr3_2:72313936-72313955 None:intergenic 60.0%
!! GGGAAAGCGCTTGGAGTTGG+AGG - chr3_2:72314096-72314115 Msa0422820:intron 60.0%
GACGGAGCCAATTCCAGTGG+CGG - chr3_2:72316486-72316505 Msa0422820:CDS 60.0%
ACGGAGCCAATTCCAGTGGC+GGG - chr3_2:72316487-72316506 Msa0422820:CDS 60.0%
TGTAGCATGTTCCCCGCCAC+TGG + chr3_2:72316502-72316521 None:intergenic 60.0%
GGCATAGGGTGGGTAGGGGT+AGG + chr3_2:72313053-72313072 None:intergenic 65.0%
CGTGACGGCATAGGGTGGGT+AGG + chr3_2:72313059-72313078 None:intergenic 65.0%
AATCGACGTCGCGGCGAAGG+AGG + chr3_2:72313933-72313952 None:intergenic 65.0%
CGGAGCCAATTCCAGTGGCG+GGG - chr3_2:72316488-72316507 Msa0422820:CDS 65.0%
GCGGCGTGACGGCATAGGGT+GGG + chr3_2:72313063-72313082 None:intergenic 70.0%
TAGATGCGGCGGCGGCGTGA+CGG + chr3_2:72313074-72313093 None:intergenic 70.0%
GGGTGGGAGGGGCAGGACTA+AGG + chr3_2:72313123-72313142 None:intergenic 70.0%
GTTTCAGGGGTGGGAGGGGC+AGG + chr3_2:72313130-72313149 None:intergenic 70.0%
ACACCGGCGACGAGACCTGG+CGG + chr3_2:72313361-72313380 None:intergenic 70.0%
! TCGTCGCCGGTGTGCCACTG+TGG - chr3_2:72313368-72313387 Msa0422820:intron 70.0%
! CGTCGCCGGTGTGCCACTGT+GGG - chr3_2:72313369-72313388 Msa0422820:intron 70.0%
GTGGGCCCACAGTGGCACAC+CGG + chr3_2:72313377-72313396 None:intergenic 70.0%
GGCGGCGTGACGGCATAGGG+TGG + chr3_2:72313064-72313083 None:intergenic 75.0%
GGCGGCGGCGTGACGGCATA+GGG + chr3_2:72313067-72313086 None:intergenic 75.0%
GGCACACCGGCGACGAGACC+TGG + chr3_2:72313364-72313383 None:intergenic 75.0%
CGACGTCGCGGCGAAGGAGG+TGG + chr3_2:72313930-72313949 None:intergenic 75.0%
! CGGCGGCGGCGTGACGGCAT+AGG + chr3_2:72313068-72313087 None:intergenic 80.0%
!! GCGGCGGAGGTAGCGGCGTG+GGG + chr3_2:72313339-72313358 None:intergenic 80.0%
!! GGCGGCGGAGGTAGCGGCGT+GGG + chr3_2:72313340-72313359 None:intergenic 80.0%
! CCTGGCGGCGGCGGAGGTAG+CGG + chr3_2:72313346-72313365 None:intergenic 80.0%
! ACGAGACCTGGCGGCGGCGG+AGG + chr3_2:72313352-72313371 None:intergenic 80.0%
! GCGACGAGACCTGGCGGCGG+CGG + chr3_2:72313355-72313374 None:intergenic 80.0%
! CCGGCGACGAGACCTGGCGG+CGG + chr3_2:72313358-72313377 None:intergenic 80.0%
! CCGCCGCCAGGTCTCGTCGC+CGG - chr3_2:72313355-72313374 Msa0422820:intron 80.0%
!! CGGCGGCGGAGGTAGCGGCG+TGG + chr3_2:72313341-72313360 None:intergenic 85.0%
! CCGCTACCTCCGCCGCCGCC+AGG - chr3_2:72313343-72313362 Msa0422820:intron 85.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 72312971 72316663 72312971 ID=Msa0422820;Name=Msa0422820
chr3_2 mRNA 72312971 72316663 72312971 ID=Msa0422820-mRNA-1;Parent=Msa0422820;Name=Msa0422820-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.75|0.2|1|1|1|5|0|526
chr3_2 exon 72316138 72316663 72316138 ID=Msa0422820-mRNA-1:exon:17836;Parent=Msa0422820-mRNA-1
chr3_2 exon 72315406 72315922 72315406 ID=Msa0422820-mRNA-1:exon:17835;Parent=Msa0422820-mRNA-1
chr3_2 exon 72315189 72315302 72315189 ID=Msa0422820-mRNA-1:exon:17834;Parent=Msa0422820-mRNA-1
chr3_2 exon 72314724 72314865 72314724 ID=Msa0422820-mRNA-1:exon:17833;Parent=Msa0422820-mRNA-1
chr3_2 exon 72312971 72313252 72312971 ID=Msa0422820-mRNA-1:exon:17832;Parent=Msa0422820-mRNA-1
chr3_2 CDS 72316138 72316663 72316138 ID=Msa0422820-mRNA-1:cds;Parent=Msa0422820-mRNA-1
chr3_2 CDS 72315406 72315922 72315406 ID=Msa0422820-mRNA-1:cds;Parent=Msa0422820-mRNA-1
chr3_2 CDS 72315189 72315302 72315189 ID=Msa0422820-mRNA-1:cds;Parent=Msa0422820-mRNA-1
chr3_2 CDS 72314724 72314865 72314724 ID=Msa0422820-mRNA-1:cds;Parent=Msa0422820-mRNA-1
chr3_2 CDS 72312971 72313252 72312971 ID=Msa0422820-mRNA-1:cds;Parent=Msa0422820-mRNA-1
Gene Sequence

>Msa0422820

ATGGGAGAAACCTTAAACCCTACTGCTCCAGAGTTTAACCCAAACAACTACATTCCCATACCAGTCGCCGTCGGTATTCCCTACCCCTACCCACCCTATGCCGTCACGCCGCCGCCGCATCTATCCACCATACCCACCCGCTCTATTCTCCTTAGTCCTGCCCCTCCCACCCCTGAAACTGACCTACGTAAAGACCTTTCGGCTTTCGGCGAAGTCAGAGCCGTTCAAACGGACTCATTCCGTAACGGAGTCATAACTGCTCATTACTTTGATATTAGACACGCAGAGACGGCGTTTGCCGCTATTCGCACTCACCACGTCCTCTGTGCTGCGTATTTCAACCCTCTTTCTTATTCCCAAATTTTCCCCACGCCGCTACCTCCGCCGCCGCCAGGTCTCGTCGCCGGTGTGCCACTGTGGGCCCACTATGTACTGGCTGATACTGAGAATCAAGGAACCCTAGTTGTTTTCAATTTAGACGACGACGTTTCCTCTGATCAGCTGCGACAAGTTTTTGAAGCTTTTGGAGCAATTAAGGAAGTGAGGGATACACCATGGAAGAAAAGGAATCAGAGTTTTGTGGAGTTTTTCGACATAAGAGATGCTGAAAAGGCTTTGAAAGAATTGAATGGCAAAGAGATTAATGGAAAACCAATTACTATTGAGTTTAGTAAACCAAAATCATTTCATTCTAATCCCAATGCTTACATCTCTAATAAGCCATTTAATTTCAACCTTAATCCACCTCCTTCGCCGCGACGTCGATTTTCTCCACGCCCTCATTCACCACAATTATCTCATAAGAGTTTGACATTTAACCGGGTAAACCACAATAGGATTGGTTCAATGGGTTCATTGAAGGGTGAAGAGAGGTATCCTTTTGTTAGAGTTCAAAGTAGAGAGAGTTTTGGGGAAAGCGCTTGGAGTTGGAGGGGGAAGATAGCAAAGAAACATGAAAATCGTTTTCTAATCAAAGAAGATGCCATTGTTGAATCTGATCCTAGAACGACTCTCATGATAAAAAACATACCCAACAAATACAGTCAGAAGTTACTGTTGAATATGCTGGACAACCACTGTGTACACTGCAATGAGCAGCTAGGCGACGGCGAGCCTTTATCCTCCTATGACTTTGTGTACCTTCCTATAGATTTTAAGAACAAATGCAACGTGGGATATGGATTTGTGAATATGACATCTCCTGAGGCAACGCTAAGATTCTACAAGGCCTTCCAGCACCAACATTGGGAGGTCTTTAACTCTAGAAAAATTTGCCAACTCACATACGCAAGAGCTCAGGGTTTGGAAGCATTGAAAGAGCATTTTAAGAACTCAAAGTTCCCGTGTGAGATGGAGCATTATCTGCCAGTGGTGTTTTCACCACCTCGAGATGGGAAACAATTGACGGAGCCAATTCCAGTGGCGGGGAACATGCTACAAATTGGTGCTGCTCCTTCTGTAGCTGATGAGATGGAAGAAGGTCAAGATCATAGGGTAGGTAGTGGTGGCTGTGACGTGATGAGCAGAAAAAGTGGCGGCATAGGTGATGATGATGATGATGATAAAACAGATGTGAAGTGA
Protein sequence

>Msa0422820

MGETLNPTAPEFNPNNYIPIPVAVGIPYPYPPYAVTPPPHLSTIPTRSILLSPAPPTPETDLRKDLSAFGEVRAVQTDSFRNGVITAHYFDIRHAETAFAAIRTHHVLCAAYFNPLSYSQIFPTPLPPPPPGLVAGVPLWAHYVLADTENQGTLVVFNLDDDVSSDQLRQVFEAFGAIKEVRDTPWKKRNQSFVEFFDIRDAEKALKELNGKEINGKPITIEFSKPKSFHSNPNAYISNKPFNFNLNPPPSPRRRFSPRPHSPQLSHKSLTFNRVNHNRIGSMGSLKGEERYPFVRVQSRESFGESAWSWRGKIAKKHENRFLIKEDAIVESDPRTTLMIKNIPNKYSQKLLLNMLDNHCVHCNEQLGDGEPLSSYDFVYLPIDFKNKCNVGYGFVNMTSPEATLRFYKAFQHQHWEVFNSRKICQLTYARAQGLEALKEHFKNSKFPCEMEHYLPVVFSPPRDGKQLTEPIPVAGNMLQIGAAPSVADEMEEGQDHRVGSGGCDVMSRKSGGIGDDDDDDKTDVK*