AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0520140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0520140 MtrunA17_Chr3g0135801 98.171 328 2 3 1 326 1 326 0.0 650
Msa0520140 MtrunA17_Chr8g0352031 39.667 300 168 6 28 321 63 355 7.21e-64 206
Msa0520140 MtrunA17_Chr2g0328891 40.000 310 174 6 22 326 55 357 4.89e-63 204
Msa0520140 MtrunA17_Chr4g0040341 40.000 295 165 6 29 318 71 358 5.25e-62 201
Msa0520140 MtrunA17_Chr3g0088301 39.731 297 167 6 27 318 87 376 8.01e-61 199
Msa0520140 MtrunA17_Chr8g0393031 36.332 289 172 6 38 319 19 302 8.12e-58 189
Msa0520140 MtrunA17_Chr3g0135861 30.838 334 189 9 12 321 14 329 3.89e-40 144
Msa0520140 MtrunA17_Chr6g0488081 29.355 310 184 9 29 321 15 306 1.29e-37 136
Msa0520140 MtrunA17_Chr6g0488081 24.038 208 145 4 32 233 114 314 4.73e-14 71.6
Msa0520140 MtrunA17_Chr4g0067231 26.994 326 207 6 24 322 5 326 4.69e-36 132
Msa0520140 MtrunA17_Chr8g0347451 30.312 320 189 9 26 321 44 353 2.17e-35 131
Msa0520140 MtrunA17_Chr5g0396801 27.954 347 208 9 2 321 7 338 1.49e-34 129
Msa0520140 MtrunA17_Chr2g0296061 26.710 307 197 5 35 317 17 319 1.87e-33 125
Msa0520140 MtrunA17_Chr7g0240341 29.431 299 196 7 32 322 24 315 3.47e-33 124
Msa0520140 MtrunA17_Chr4g0006851 30.961 281 169 7 44 321 100 358 2.29e-31 121
Msa0520140 MtrunA17_Chr8g0385571 27.273 308 193 8 24 322 218 503 8.55e-30 118
Msa0520140 MtrunA17_Chr7g0252401 28.808 302 179 9 31 322 205 480 2.37e-29 117
Msa0520140 MtrunA17_Chr7g0242311 29.643 280 172 7 45 321 99 356 2.35e-28 113
Msa0520140 MtrunA17_Chr3g0131501 25.723 311 194 8 24 322 196 481 6.74e-28 113
Msa0520140 MtrunA17_Chr5g0436041 30.068 296 193 7 32 321 33 320 3.60e-27 108
Msa0520140 MtrunA17_Chr7g0269701 29.210 291 194 5 35 321 24 306 2.88e-26 106
Msa0520140 MtrunA17_Chr7g0269701 29.000 200 132 5 127 321 12 206 2.52e-15 75.5
Msa0520140 MtrunA17_Chr1g0149111 26.962 293 193 7 31 321 137 410 2.07e-23 99.8
Msa0520140 MtrunA17_Chr3g0137941 26.531 294 193 8 31 321 120 393 1.51e-22 97.1
Msa0520140 MtrunA17_Chr3g0137941 26.699 206 124 5 33 232 216 400 4.04e-16 78.6
Msa0520140 MtrunA17_Chr1g0195101 27.758 281 191 5 45 321 31 303 1.89e-22 95.5
Msa0520140 MtrunA17_Chr1g0195101 29.648 199 131 6 127 318 4 200 1.67e-11 64.3
Msa0520140 MtrunA17_Chr4g0063561 27.157 313 205 10 12 321 102 394 1.41e-21 94.4
Msa0520140 MtrunA17_Chr4g0063561 29.798 198 115 5 34 227 219 396 1.43e-15 77.0
Msa0520140 MtrunA17_Chr5g0423111 27.875 287 183 8 45 321 33 305 2.66e-20 90.1
Msa0520140 MtrunA17_Chr3g0115801 25.723 346 209 8 1 321 80 402 9.78e-20 89.0
Msa0520140 MtrunA17_Chr8g0366791 25.083 303 206 11 27 319 3 294 3.38e-19 86.3
Msa0520140 MtrunA17_Chr4g0008061 25.818 275 192 4 49 320 31 296 4.40e-19 85.9
Msa0520140 MtrunA17_Chr3g0133111 24.281 313 204 8 37 322 5 311 1.62e-18 84.7
Msa0520140 MtrunA17_Chr5g0411411 23.102 303 214 9 26 319 2 294 2.16e-17 81.3
Msa0520140 MtrunA17_Chr7g0241521 23.466 277 198 5 49 321 33 299 5.15e-17 80.1
Msa0520140 MtrunA17_Chr7g0241521 28.641 206 134 6 124 319 3 205 4.89e-16 77.4
Msa0520140 MtrunA17_Chr6g0463041 24.242 231 128 5 132 321 16 240 6.79e-17 79.0
Msa0520140 MtrunA17_Chr5g0412401 23.922 255 179 7 76 322 73 320 1.67e-15 76.3
Msa0520140 MtrunA17_Chr4g0028531 24.211 285 187 8 36 311 28 292 1.71e-15 75.9
Msa0520140 MtrunA17_Chr4g0046981 27.363 201 130 6 133 322 4 199 1.86e-15 75.9
Msa0520140 MtrunA17_Chr7g0275411 23.964 338 219 9 16 320 1 333 2.51e-15 75.9
Msa0520140 MtrunA17_Chr4g0000261 25.723 311 185 12 31 319 64 350 1.01e-14 74.3
Msa0520140 MtrunA17_Chr3g0086811 27.136 199 124 4 141 319 28 225 1.35e-14 73.6
Msa0520140 MtrunA17_Chr8g0382201 25.714 315 190 9 28 321 190 481 1.76e-14 73.9
Msa0520140 MtrunA17_Chr3g0103681 22.648 287 210 4 20 303 2 279 2.75e-14 72.4
Msa0520140 MtrunA17_Chr8g0372531 26.347 167 121 2 155 319 28 194 1.11e-13 70.5
Msa0520140 MtrunA17_Chr1g0205941 21.543 311 199 11 35 323 13 300 3.38e-13 69.3
Msa0520140 MtrunA17_Chr2g0293621 25.083 303 193 12 36 320 32 318 8.75e-12 65.1
Msa0520140 MtrunA17_Chr1g0201361 24.092 303 178 10 2 296 20 278 2.09e-11 63.9
Msa0520140 MtrunA17_Chr7g0219891 27.083 192 122 5 141 321 21 205 5.59e-11 62.8
Msa0520140 MtrunA17_Chr8g0367641 22.267 247 180 5 82 322 73 313 8.29e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0520140 AT5G56450.1 75.915 328 73 3 1 324 3 328 0.0 518
Msa0520140 AT5G13490.1 39.799 299 167 6 26 318 81 372 3.74e-63 205
Msa0520140 AT5G13490.2 39.799 299 167 6 26 318 81 372 3.74e-63 205
Msa0520140 AT5G17400.1 36.964 303 175 8 29 323 10 304 1.54e-62 201
Msa0520140 AT3G08580.2 39.465 299 168 6 26 318 77 368 2.32e-62 203
Msa0520140 AT3G08580.1 39.465 299 168 6 26 318 77 368 2.32e-62 203
Msa0520140 AT4G28390.1 38.983 295 168 6 29 318 79 366 1.47e-59 196
Msa0520140 AT4G28390.2 38.983 295 168 6 29 318 79 366 1.47e-59 196
Msa0520140 AT4G26180.1 31.922 307 175 10 29 318 17 306 2.55e-37 136
Msa0520140 AT4G01100.1 29.859 355 204 9 1 321 1 344 8.08e-37 135
Msa0520140 AT4G26180.2 31.959 291 165 9 29 303 17 290 4.14e-36 132
Msa0520140 AT4G01100.2 28.689 366 208 9 1 321 1 358 1.26e-34 130
Msa0520140 AT3G53940.1 29.970 337 197 13 2 322 48 361 6.26e-34 128
Msa0520140 AT5G48970.1 28.431 306 188 6 32 310 21 322 8.70e-34 127
Msa0520140 AT3G51870.1 32.028 281 166 8 44 321 102 360 4.03e-33 126
Msa0520140 AT2G37890.1 29.712 313 190 13 24 322 37 333 1.38e-32 124
Msa0520140 AT2G37890.1 24.286 210 145 3 19 227 138 334 6.68e-13 68.9
Msa0520140 AT4G01100.3 30.464 302 174 8 45 321 4 294 5.35e-32 121
Msa0520140 AT1G14560.1 30.897 301 165 11 45 321 39 320 1.61e-31 120
Msa0520140 AT5G01500.1 31.206 282 167 8 44 321 130 388 2.01e-30 119
Msa0520140 AT1G14560.2 31.206 282 152 10 45 303 39 301 7.10e-30 116
Msa0520140 AT3G21390.1 25.962 312 201 5 32 317 18 325 7.78e-29 114
Msa0520140 AT5G61810.2 28.912 294 174 9 33 319 65 330 9.65e-29 113
Msa0520140 AT3G21390.2 26.230 305 195 5 32 310 40 340 1.55e-28 113
Msa0520140 AT5G61810.1 28.912 294 174 9 33 319 208 473 2.41e-28 114
Msa0520140 AT3G55640.1 29.022 317 199 11 22 322 20 326 8.73e-28 110
Msa0520140 AT3G55640.4 29.022 317 199 11 22 322 20 326 8.73e-28 110
Msa0520140 AT5G48970.2 28.862 246 150 4 86 310 10 251 3.67e-27 107
Msa0520140 AT5G07320.1 27.972 286 167 10 45 321 221 476 7.41e-24 102
Msa0520140 AT5G51050.1 26.756 299 185 9 33 322 223 496 1.85e-23 100
Msa0520140 AT4G32400.1 26.871 294 192 7 31 321 112 385 5.53e-23 98.6
Msa0520140 AT4G32400.1 29.268 205 118 6 32 230 207 390 1.96e-16 79.7
Msa0520140 AT3G53940.2 31.004 229 132 7 2 222 48 258 1.03e-22 96.3
Msa0520140 AT3G55640.2 30.806 211 131 5 22 223 20 224 1.11e-20 90.1
Msa0520140 AT3G55640.3 30.806 211 131 5 22 223 20 224 1.11e-20 90.1
Msa0520140 AT1G14560.3 30.952 210 116 6 135 321 19 222 1.64e-20 89.0
Msa0520140 AT1G25380.1 27.660 282 189 8 45 320 33 305 2.89e-20 90.5
Msa0520140 AT1G25380.2 27.660 282 189 8 45 320 33 305 2.89e-20 90.5
Msa0520140 AT2G47490.1 27.046 281 192 6 45 321 29 300 2.09e-19 87.4
Msa0520140 AT3G54110.1 26.014 296 181 9 41 321 25 297 3.08e-19 87.0
Msa0520140 AT3G54110.1 25.926 189 131 4 140 319 14 202 4.84e-13 68.9
Msa0520140 AT3G20240.1 24.430 307 194 9 31 319 50 336 4.84e-19 87.0
Msa0520140 AT5G58970.1 24.662 296 209 5 28 319 11 296 3.24e-18 84.0
Msa0520140 AT1G78180.1 26.183 317 186 7 28 321 123 414 4.55e-17 82.0
Msa0520140 AT5G64970.1 27.124 306 175 7 28 310 130 410 5.58e-17 81.6
Msa0520140 AT5G46800.2 25.497 302 201 10 31 319 6 296 6.34e-16 77.4
Msa0520140 AT5G46800.3 25.497 302 201 10 31 319 6 296 6.34e-16 77.4
Msa0520140 AT5G46800.1 25.497 302 201 10 31 319 6 296 6.34e-16 77.4
Msa0520140 AT5G64970.3 26.756 299 171 7 28 303 130 403 8.51e-16 78.2
Msa0520140 AT5G64970.2 26.625 323 183 8 20 319 4 295 9.92e-16 77.0
Msa0520140 AT2G22500.1 26.122 245 167 6 83 320 70 307 3.15e-14 72.8
Msa0520140 AT5G58970.2 27.895 190 127 5 140 319 15 204 3.30e-14 72.0
Msa0520140 AT2G46320.1 21.972 355 229 6 10 320 3 353 4.40e-14 72.8
Msa0520140 AT2G33820.1 26.842 190 123 6 140 318 17 201 8.79e-14 71.2
Msa0520140 AT1G14140.1 24.231 260 178 10 44 296 27 274 9.63e-14 71.2
Msa0520140 AT2G33820.4 26.804 194 126 6 136 318 13 201 9.94e-14 70.9
Msa0520140 AT5G01340.1 24.832 298 181 11 39 317 22 295 3.47e-13 69.7
Msa0520140 AT5G66380.1 27.225 191 124 5 140 321 9 193 5.30e-13 68.9
Msa0520140 AT5G66380.1 22.742 299 211 7 35 322 12 301 1.24e-11 65.1
Msa0520140 AT4G24570.1 24.180 244 172 5 82 321 76 310 9.60e-13 68.2
Msa0520140 AT1G34065.2 28.821 229 127 8 7 230 136 333 1.47e-12 67.8
Msa0520140 AT1G34065.1 28.821 229 127 8 7 230 143 340 1.60e-12 67.8
Msa0520140 AT4G27940.1 23.132 281 189 5 61 321 133 406 1.92e-12 68.2
Msa0520140 AT1G74240.1 23.671 207 136 4 140 325 35 240 5.51e-12 66.2
Msa0520140 AT2G30160.1 24.510 306 200 11 28 322 37 322 5.63e-12 66.2
Msa0520140 AT5G27520.1 22.186 311 197 11 35 323 15 302 2.96e-11 63.9
Msa0520140 AT2G33820.3 25.743 202 126 7 136 318 13 209 3.62e-11 63.5
Msa0520140 AT3G05290.1 22.508 311 196 11 35 323 13 300 7.29e-11 62.8
Msa0520140 AT1G07030.1 21.523 302 211 6 28 322 35 317 9.83e-11 62.4

Find 116 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTACAAAAGCATATTA+AGG 0.230398 3_4:+72630498 Msa0520140:CDS
TATACATTACATTGAGGTTT+AGG 0.269915 3_4:+72631200 Msa0520140:three_prime_UTR
GCAGACACAAGAAAGTAATT+TGG 0.276307 3_4:+72627381 Msa0520140:CDS
TGCACTCAATTTCTCTCTTA+AGG 0.286938 3_4:+72627534 Msa0520140:CDS
TTGCTTAATCACACATGATT+AGG 0.293403 3_4:+72627083 Msa0520140:five_prime_UTR
GTATAGTCACCAATTTAAAA+AGG 0.303725 3_4:+72631302 Msa0520140:three_prime_UTR
ATTGTATTATTCGTACTGTT+AGG 0.303928 3_4:+72627446 Msa0520140:CDS
GAGCAGTTTCGAATGTGTTT+AGG 0.310097 3_4:+72631038 Msa0520140:CDS
ATTCACAAACTTTGCTCAAA+AGG 0.340101 3_4:-72627152 None:intergenic
TCTCTTTGTGGCGTGGTAAT+GGG 0.341488 3_4:+72627482 Msa0520140:CDS
ATCTCTTTGTGGCGTGGTAA+TGG 0.347053 3_4:+72627481 Msa0520140:CDS
ACCTCAATGTAATGTATAAC+AGG 0.350280 3_4:-72631195 None:intergenic
AGGTCAAGAAATTTATGAAC+TGG 0.380390 3_4:+72631098 Msa0520140:CDS
CTCAGTTAACTACGTTGGTT+TGG 0.384547 3_4:-72631141 None:intergenic
TCTTATGGCTGGTGCGGTGA+TGG 0.394510 3_4:+72627306 Msa0520140:CDS
GCTCCAGAGAAAATATTATC+AGG 0.395058 3_4:-72630539 None:intergenic
TGTAATAATAAGATTATGAT+TGG 0.400234 3_4:+72631386 Msa0520140:three_prime_UTR
ATTACACCCTCATCAATCAT+TGG 0.404045 3_4:-72631369 None:intergenic
ATTTGAAAATGCATCTTGAA+TGG 0.404307 3_4:+72631261 Msa0520140:three_prime_UTR
ATCAAAACTATCTTTGTCAA+TGG 0.425899 3_4:+72626949 None:intergenic
TCTTTACAAAAGCATATTAA+GGG 0.444375 3_4:+72630499 Msa0520140:CDS
TATTCCAGAAAGACGGGGTA+CGG 0.444967 3_4:+72630711 Msa0520140:CDS
TCGAATGTGTTTAGGAGCAC+TGG 0.445834 3_4:+72631046 Msa0520140:CDS
ATTCGTACTGTTAGGGAAGA+AGG 0.446792 3_4:+72627454 Msa0520140:CDS
CTTATGGCTGGTGCGGTGAT+GGG 0.449033 3_4:+72627307 Msa0520140:CDS
GGAATATAGTGGCTAAGAAA+TGG 0.449880 3_4:-72630694 None:intergenic
TCCAATGTCAGCAGCAAGGC+GGG 0.451091 3_4:-72630639 None:intergenic
ATTCCAGAAAGACGGGGTAC+GGG 0.453968 3_4:+72630712 Msa0520140:CDS
TTAAGCAAGCTTAATTCAAA+AGG 0.455436 3_4:-72627068 None:intergenic
GGCGGGTGTGTGCAATATCA+AGG 0.457851 3_4:-72630622 None:intergenic
TGAAATGCGTGTTGTGTGTA+TGG 0.461075 3_4:-72627033 None:intergenic
TTCACAAACTTTGCTCAAAA+GGG 0.462339 3_4:-72627151 None:intergenic
CGGAGAATGATGATGCAGTC+TGG 0.466596 3_4:+72630932 Msa0520140:CDS
AGTTACAACCTCAGCCGGTC+TGG 0.467544 3_4:+72630883 Msa0520140:CDS
AATAACTTAGCCCTCTCAAT+TGG 0.476467 3_4:-72627355 None:intergenic
TTGTATTATTCGTACTGTTA+GGG 0.477702 3_4:+72627447 Msa0520140:CDS
AAGAAGGTGTTATCTCTTTG+TGG 0.477794 3_4:+72627470 Msa0520140:CDS
ACCCGCCTTGCTGCTGACAT+TGG 0.479408 3_4:+72630638 Msa0520140:CDS
CAGGTTGTAATGAAAGTAAC+CGG 0.479608 3_4:-72631176 None:intergenic
ACAATAGCACCCTCGACTGC+TGG 0.481567 3_4:+72630972 Msa0520140:CDS
CCACTATATTCCAGAAAGAC+GGG 0.483157 3_4:+72630705 Msa0520140:CDS
ACCATACCATGTAGTGATGC+AGG 0.497343 3_4:-72630752 None:intergenic
AGCAAATATTGTCATGGCCG+AGG 0.499911 3_4:+72631332 Msa0520140:three_prime_UTR
GCAGTCTGGCATGGAACATC+CGG 0.500996 3_4:+72630946 Msa0520140:CDS
TTTCAACGCGATCTTATGGC+TGG 0.502715 3_4:+72627295 Msa0520140:CDS
TTTGTGGCTGGAGCTGCAGC+AGG 0.504904 3_4:+72630572 Msa0520140:CDS
TCCTGCATCACTACATGGTA+TGG 0.515940 3_4:+72630751 Msa0520140:CDS
AGGTAGGAATTGAAATTCGT+TGG 0.516417 3_4:-72626998 None:intergenic
CGCTTCCACAACGCCAACTC+AGG 0.520701 3_4:-72630842 None:intergenic
TACTAGTACAATAGTTTACA+AGG 0.522434 3_4:-72631438 None:intergenic
GGTCTTCCTGCATCACTACA+TGG 0.523489 3_4:+72630746 Msa0520140:CDS
GCCTTGCTGCTGACATTGGA+AGG 0.525002 3_4:+72630642 Msa0520140:CDS
CACAGAGGTCTTTACTTCGG+AGG 0.532931 3_4:+72630779 Msa0520140:CDS
ACCTGTTATACATTACATTG+AGG 0.532982 3_4:+72631194 Msa0520140:three_prime_UTR
GAGAAATTGAGTGCAACAGA+AGG 0.533707 3_4:-72627526 None:intergenic
GTGTATGGTGGCTGCGGACA+AGG 0.535525 3_4:-72627018 None:intergenic
GCCACTATATTCCAGAAAGA+CGG 0.536387 3_4:+72630704 Msa0520140:CDS
TTCCAGAAAGACGGGGTACG+GGG 0.537972 3_4:+72630713 Msa0520140:CDS
GCGGGTGTGTGCAATATCAA+GGG 0.541293 3_4:-72630621 None:intergenic
GTGGTAGAAGAAAATTCAAA+GGG 0.543264 3_4:+72627416 Msa0520140:CDS
GGTCAAGAAATTTATGAACT+GGG 0.543499 3_4:+72631099 Msa0520140:CDS
TGAAGAATCTAAACCTGAGT+TGG 0.544164 3_4:+72630829 Msa0520140:CDS
ATGGCTGGTGCGGTGATGGG+TGG 0.553337 3_4:+72627310 Msa0520140:CDS
TGCTGCTGACATTGGAAGGA+CGG 0.555913 3_4:+72630646 Msa0520140:CDS
TGGTGCGGTGATGGGTGGTG+CGG 0.558043 3_4:+72627315 Msa0520140:CDS
GCAAATATTGTCATGGCCGA+GGG 0.562528 3_4:+72631333 Msa0520140:three_prime_UTR
AGTGGTAGAAGAAAATTCAA+AGG 0.562791 3_4:+72627415 Msa0520140:CDS
TGAATGGCATTTCAACTCAA+AGG 0.565329 3_4:+72631277 Msa0520140:three_prime_UTR
AAAAGCATATTAAGGGGTGG+AGG 0.566280 3_4:+72630506 Msa0520140:CDS
AGGTTGTACATCACTCATCT+TGG 0.571908 3_4:+72630592 Msa0520140:CDS
ATACGATACCAGACCGGCTG+AGG 0.572285 3_4:-72630891 None:intergenic
CAAGCAGTTACAACCTCAGC+CGG 0.572927 3_4:+72630878 Msa0520140:CDS
AATGATGATGCAGTCTGGCA+TGG 0.576929 3_4:+72630937 Msa0520140:CDS
AGGAAAATCTATCGAACAGA+GGG 0.577446 3_4:+72630995 Msa0520140:CDS
CTAAGAAATGGTGAATGCCT+CGG 0.578562 3_4:-72630682 None:intergenic
ATGAACTCAGTTAACTACGT+TGG 0.580668 3_4:-72631146 None:intergenic
ACAGAGGTCTTTACTTCGGA+GGG 0.582487 3_4:+72630780 Msa0520140:CDS
TGGCTTCTAATCTAGTCCCT+CGG 0.586919 3_4:-72631349 None:intergenic
CCCGTCTTTCTGGAATATAG+TGG 0.589385 3_4:-72630705 None:intergenic
TGTTGTGTGTATGGTGGCTG+CGG 0.594245 3_4:-72627024 None:intergenic
TAATTAAGCAAATATTGTCA+TGG 0.599091 3_4:+72631326 Msa0520140:three_prime_UTR
ATACACAGAGGTCTTTACTT+CGG 0.599114 3_4:+72630776 Msa0520140:CDS
AATTTGGCTATTGTTGCTAG+TGG 0.601620 3_4:+72627397 Msa0520140:CDS
TCCTTCCAATGTCAGCAGCA+AGG 0.602029 3_4:-72630643 None:intergenic
TCCAGAAAGACGGGGTACGG+GGG 0.606693 3_4:+72630714 Msa0520140:CDS
CAATTGTGGCACCAATTGAG+AGG 0.607857 3_4:+72627344 Msa0520140:CDS
TACAAAAGCATATTAAGGGG+TGG 0.608973 3_4:+72630503 Msa0520140:CDS
GCGGCGAATTTAAGGATGAG+TGG 0.609005 3_4:+72627196 Msa0520140:exon
AGTTGGCGTTGTGGAAGCGA+TGG 0.612266 3_4:+72630846 Msa0520140:CDS
CTAAACCTGAGTTGGCGTTG+TGG 0.612706 3_4:+72630837 Msa0520140:CDS
GGCGTTGTGGAAGCGATGGA+TGG 0.614379 3_4:+72630850 Msa0520140:CDS
GGTGTTATCTCTTTGTGGCG+TGG 0.614711 3_4:+72627475 Msa0520140:CDS
TATCTTAGTCTTGTATGATG+AGG 0.616581 3_4:+72631078 Msa0520140:CDS
TTAGAAGCCAATGATTGATG+AGG 0.616709 3_4:+72631362 Msa0520140:three_prime_UTR
TAGAAGCCAATGATTGATGA+GGG 0.619868 3_4:+72631363 Msa0520140:three_prime_UTR
GTCAAGAAATTTATGAACTG+GGG 0.624053 3_4:+72631100 Msa0520140:CDS
ACGCGATCTTATGGCTGGTG+CGG 0.629220 3_4:+72627300 Msa0520140:CDS
ATAGCACCCTCGACTGCTGG+AGG 0.632984 3_4:+72630975 Msa0520140:CDS
CTTTACAAAAGCATATTAAG+GGG 0.639364 3_4:+72630500 Msa0520140:CDS
ACGGAAGTGCGTCAATTCCG+AGG 0.643237 3_4:+72630665 Msa0520140:CDS
AATTGTGGCACCAATTGAGA+GGG 0.649550 3_4:+72627345 Msa0520140:CDS
CGGGTGTGTGCAATATCAAG+GGG 0.649657 3_4:-72630620 None:intergenic
CTCCGACGAACTGTGTCTAG+CGG 0.655045 3_4:-72630914 None:intergenic
ATGGTGGCTGCGGACAAGGT+AGG 0.655388 3_4:-72627014 None:intergenic
GAATTTAAGGATGAGTGGAG+AGG 0.658027 3_4:+72627201 Msa0520140:exon
TGGTGCGGTTCATACAATTG+TGG 0.667762 3_4:+72627330 Msa0520140:CDS
TCGAGGGTGCTATTGTACAC+CGG 0.673149 3_4:-72630965 None:intergenic
TTCCAATGTCAGCAGCAAGG+CGG 0.673559 3_4:-72630640 None:intergenic
ATCCGCTAGACACAGTTCGT+CGG 0.677521 3_4:+72630912 Msa0520140:CDS
CACTATATTCCAGAAAGACG+GGG 0.686407 3_4:+72630706 Msa0520140:CDS
GAGGAAAATCTATCGAACAG+AGG 0.690051 3_4:+72630994 Msa0520140:CDS
TAGCGGATACGATACCAGAC+CGG 0.706446 3_4:-72630897 None:intergenic
AATGCGTGTTGTGTGTATGG+TGG 0.710105 3_4:-72627030 None:intergenic
ACACATTCGAAACTGCTCCG+CGG 0.751998 3_4:-72631033 None:intergenic
CATGGTATGGTGATACACAG+AGG 0.757473 3_4:+72630764 Msa0520140:CDS
GGGTGTGTGCAATATCAAGG+GGG 0.800764 3_4:-72630619 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATATTATGAAAACATT+TGG + chr3_4:72627612-72627631 Msa0520140:intron 10.0%
!!! TTTTATTTTATTTTACAAGA+TGG + chr3_4:72628988-72629007 Msa0520140:intron 10.0%
!!! TTTTAAAAGAAAAGATTTTG+CGG + chr3_4:72627177-72627196 Msa0520140:five_prime_UTR 15.0%
!! CTTTATTCTTTATTATGAAA+TGG + chr3_4:72627565-72627584 Msa0520140:intron 15.0%
!!! ATTAATAACTTGCAATATTA+GGG - chr3_4:72627596-72627615 None:intergenic 15.0%
!!! TATTAATAACTTGCAATATT+AGG - chr3_4:72627597-72627616 None:intergenic 15.0%
!!! AATGCATTTTTAAATGAAAT+AGG - chr3_4:72629631-72629650 None:intergenic 15.0%
!!! ATTTGTATTAATTCCAATTT+TGG + chr3_4:72629729-72629748 Msa0520140:intron 15.0%
!!! TAAAATTTCAGAATTTTTTC+TGG + chr3_4:72630013-72630032 Msa0520140:intron 15.0%
!!! CTTAATTAACCTTTTTAAAT+TGG - chr3_4:72631314-72631333 None:intergenic 15.0%
!! TGTAATAATAAGATTATGAT+TGG + chr3_4:72631386-72631405 Msa0520140:three_prime_UTR 15.0%
!! AACAATAAACAAACACTAAA+TGG - chr3_4:72627759-72627778 None:intergenic 20.0%
!! CAAACAATATATAATAACAC+GGG - chr3_4:72628099-72628118 None:intergenic 20.0%
!! GCAAACAATATATAATAACA+CGG - chr3_4:72628100-72628119 None:intergenic 20.0%
!! AAAAAAAACTATTAAGAGCT+CGG - chr3_4:72628830-72628849 None:intergenic 20.0%
!! AAGTATAGGAAAAGTAATAA+TGG + chr3_4:72629239-72629258 Msa0520140:intron 20.0%
!!! ACTTTTATTGATGATAGAAT+AGG - chr3_4:72629704-72629723 None:intergenic 20.0%
!!! ATTTATTTTGTGATAGAAAC+TGG - chr3_4:72629757-72629776 None:intergenic 20.0%
!! AGTTTCTATCACAAAATAAA+TGG + chr3_4:72629756-72629775 Msa0520140:intron 20.0%
!! ATTAGTAATATTGTGACAAA+TGG + chr3_4:72630177-72630196 Msa0520140:intron 20.0%
!! ATAAAAATGCTACTAAAATG+TGG - chr3_4:72630245-72630264 None:intergenic 20.0%
!!! ATCTTTACAAAAGCATATTA+AGG + chr3_4:72630498-72630517 Msa0520140:CDS 20.0%
!!! TCTTTACAAAAGCATATTAA+GGG + chr3_4:72630499-72630518 Msa0520140:CDS 20.0%
!!! CATTTTCAAATGAACTATAA+TGG - chr3_4:72631252-72631271 None:intergenic 20.0%
!! TAATTAAGCAAATATTGTCA+TGG + chr3_4:72631326-72631345 Msa0520140:three_prime_UTR 20.0%
! TTAAGCAAGCTTAATTCAAA+AGG - chr3_4:72627071-72627090 None:intergenic 25.0%
!!! TCAAAGCTTTTTTTTCTTCT+GGG - chr3_4:72627234-72627253 None:intergenic 25.0%
!!! TTCAAAGCTTTTTTTTCTTC+TGG - chr3_4:72627235-72627254 None:intergenic 25.0%
! ATTGTATTATTCGTACTGTT+AGG + chr3_4:72627446-72627465 Msa0520140:CDS 25.0%
! TTGTATTATTCGTACTGTTA+GGG + chr3_4:72627447-72627466 Msa0520140:CDS 25.0%
! CATACAAAACCATCATAAAA+GGG - chr3_4:72627669-72627688 None:intergenic 25.0%
! ATTATCATAATAGATCCTCA+TGG + chr3_4:72628057-72628076 Msa0520140:intron 25.0%
! AATATATAATAACACGGGAA+TGG - chr3_4:72628094-72628113 None:intergenic 25.0%
!! AATATTCTAGAAGAACCTTA+TGG + chr3_4:72628539-72628558 Msa0520140:intron 25.0%
!! ATATTCTAGAAGAACCTTAT+GGG + chr3_4:72628540-72628559 Msa0520140:intron 25.0%
! AAAATAATCCGATCAAAACA+CGG - chr3_4:72628643-72628662 None:intergenic 25.0%
! GATAATCAGGAATTATAATG+CGG - chr3_4:72628757-72628776 None:intergenic 25.0%
!! AAATTTGACCTTTTTCTTCT+CGG - chr3_4:72628929-72628948 None:intergenic 25.0%
! ATGAACTCAAAGATGTAATA+AGG + chr3_4:72629443-72629462 Msa0520140:intron 25.0%
! TGAACTCAAAGATGTAATAA+GGG + chr3_4:72629444-72629463 Msa0520140:intron 25.0%
!! CTAATGACTTTTCTTAATGA+AGG - chr3_4:72629518-72629537 None:intergenic 25.0%
! CTTCATTAAGAAAAGTCATT+AGG + chr3_4:72629516-72629535 Msa0520140:intron 25.0%
!!! AGTCATTAGGCATTTATTTT+AGG + chr3_4:72629529-72629548 Msa0520140:intron 25.0%
!!! TTTTAGGATTGACTATTGAT+TGG + chr3_4:72629545-72629564 Msa0520140:intron 25.0%
!! TTTAGGATTGACTATTGATT+GGG + chr3_4:72629546-72629565 Msa0520140:intron 25.0%
!! TTAGTTTACCATACTGTTTT+TGG + chr3_4:72629672-72629691 Msa0520140:intron 25.0%
! TCAATTTGAGTGTTAAACTA+AGG - chr3_4:72629809-72629828 None:intergenic 25.0%
! TCATTTCATTATAACATGGA+TGG - chr3_4:72629838-72629857 None:intergenic 25.0%
! AGGTTCATTTCATTATAACA+TGG - chr3_4:72629842-72629861 None:intergenic 25.0%
!!! CGCTCTTTTAATTTAAAAGA+AGG - chr3_4:72629862-72629881 None:intergenic 25.0%
!! ACTTAATCTACACCTTTTAA+TGG + chr3_4:72629892-72629911 Msa0520140:intron 25.0%
!! CTTAATCTACACCTTTTAAT+GGG + chr3_4:72629893-72629912 Msa0520140:intron 25.0%
!! TTGAAATTTGCTTACGTAAA+AGG + chr3_4:72629957-72629976 Msa0520140:intron 25.0%
! TTACTACAAAAAGCAAGATA+TGG + chr3_4:72630125-72630144 Msa0520140:intron 25.0%
! ATCAACATAGGTTAAAACTT+TGG + chr3_4:72630284-72630303 Msa0520140:intron 25.0%
! TCAACATAGGTTAAAACTTT+GGG + chr3_4:72630285-72630304 Msa0520140:intron 25.0%
!! CTTTACAAAAGCATATTAAG+GGG + chr3_4:72630500-72630519 Msa0520140:CDS 25.0%
!! AATCCTGATAATATTTTCTC+TGG + chr3_4:72630536-72630555 Msa0520140:CDS 25.0%
! TATACATTACATTGAGGTTT+AGG + chr3_4:72631200-72631219 Msa0520140:three_prime_UTR 25.0%
! ATTTGAAAATGCATCTTGAA+TGG + chr3_4:72631261-72631280 Msa0520140:three_prime_UTR 25.0%
! GTATAGTCACCAATTTAAAA+AGG + chr3_4:72631302-72631321 Msa0520140:three_prime_UTR 25.0%
! TACTAGTACAATAGTTTACA+AGG - chr3_4:72631441-72631460 None:intergenic 25.0%
GGAAGAAAAACAAAGTCAAA+TGG + chr3_4:72626970-72626989 Msa0520140:five_prime_UTR 30.0%
TTGCTTAATCACACATGATT+AGG + chr3_4:72627083-72627102 Msa0520140:five_prime_UTR 30.0%
TTCACAAACTTTGCTCAAAA+GGG - chr3_4:72627154-72627173 None:intergenic 30.0%
ATTCACAAACTTTGCTCAAA+AGG - chr3_4:72627155-72627174 None:intergenic 30.0%
AGTGGTAGAAGAAAATTCAA+AGG + chr3_4:72627415-72627434 Msa0520140:CDS 30.0%
GTGGTAGAAGAAAATTCAAA+GGG + chr3_4:72627416-72627435 Msa0520140:CDS 30.0%
GAAAAAACATCATTGAACAC+AGG - chr3_4:72627640-72627659 None:intergenic 30.0%
CCATACAAAACCATCATAAA+AGG - chr3_4:72627670-72627689 None:intergenic 30.0%
!!! CCTTTTATGATGGTTTTGTA+TGG + chr3_4:72627667-72627686 Msa0520140:intron 30.0%
GTATTTGTAAGAAACTAGCA+TGG + chr3_4:72627782-72627801 Msa0520140:intron 30.0%
AACCAAATGTCTCCAAATAA+TGG - chr3_4:72627858-72627877 None:intergenic 30.0%
! TTTTGTCATCTCATGAAAAC+TGG + chr3_4:72627876-72627895 Msa0520140:intron 30.0%
TTTGTCATCTCATGAAAACT+GGG + chr3_4:72627877-72627896 Msa0520140:intron 30.0%
! TTTACCCATCCATTTTCTTT+AGG + chr3_4:72628141-72628160 Msa0520140:intron 30.0%
! TTACCCATCCATTTTCTTTA+GGG + chr3_4:72628142-72628161 Msa0520140:intron 30.0%
! TATTCTAGAAGAACCTTATG+GGG + chr3_4:72628541-72628560 Msa0520140:intron 30.0%
AAATAATCCGATCAAAACAC+GGG - chr3_4:72628642-72628661 None:intergenic 30.0%
!!! GTGTTTTGATCGGATTATTT+TGG + chr3_4:72628642-72628661 Msa0520140:intron 30.0%
! CAGCAAGTGAAATTTTGTAT+TGG - chr3_4:72628697-72628716 None:intergenic 30.0%
! TTGCTGTTAAATTCACTCAA+GGG + chr3_4:72628711-72628730 Msa0520140:intron 30.0%
TAGAGAGAGAAAAGATAATC+AGG - chr3_4:72628770-72628789 None:intergenic 30.0%
! GTAATTTGCAAGTATTATCC+AGG + chr3_4:72628956-72628975 Msa0520140:intron 30.0%
AAAATAAAAAAACTGCAGCC+TGG - chr3_4:72628977-72628996 None:intergenic 30.0%
CAAGAACATAACCAAAGAAA+AGG - chr3_4:72629097-72629116 None:intergenic 30.0%
! TTCTTACTCTCTTGTTTACA+GGG - chr3_4:72629221-72629240 None:intergenic 30.0%
! AACAAGAGAGTAAGAAGTAT+AGG + chr3_4:72629225-72629244 Msa0520140:intron 30.0%
ATGTACATCAACTTCTTACT+AGG + chr3_4:72629408-72629427 Msa0520140:intron 30.0%
TGTACATCAACTTCTTACTA+GGG + chr3_4:72629409-72629428 Msa0520140:intron 30.0%
!! ATAAGGGCATAACTCAATTT+TGG + chr3_4:72629460-72629479 Msa0520140:intron 30.0%
!! TAAGGGCATAACTCAATTTT+GGG + chr3_4:72629461-72629480 Msa0520140:intron 30.0%
!! AAGCTCTCTAATTTTTGGAA+GGG + chr3_4:72629576-72629595 Msa0520140:intron 30.0%
! TTTTCCTTTTTCTCATTCTC+TGG + chr3_4:72629649-72629668 Msa0520140:intron 30.0%
ATAGAAACTGGTACCAAAAT+TGG - chr3_4:72629745-72629764 None:intergenic 30.0%
! TTCCTTTTTCTCCCATTAAA+AGG - chr3_4:72629907-72629926 None:intergenic 30.0%
TTTGCTTACGTAAAAGGAAA+CGG + chr3_4:72629963-72629982 Msa0520140:intron 30.0%
!!! TCAGAATTTTTTCTGGCTAA+CGG + chr3_4:72630020-72630039 Msa0520140:intron 30.0%
AAAAAGCAAGATATGGATGT+TGG + chr3_4:72630132-72630151 Msa0520140:intron 30.0%
GTCACAATATTACTAATGCA+TGG - chr3_4:72630174-72630193 None:intergenic 30.0%
ATGGAAAACAAATTTCTGCA+CGG + chr3_4:72630196-72630215 Msa0520140:intron 30.0%
! ATGCTACTAAAATGTGGTTT+TGG - chr3_4:72630239-72630258 None:intergenic 30.0%
! TTTTTATGTCCAGAAGATGA+TGG + chr3_4:72630258-72630277 Msa0520140:intron 30.0%
!! AGATGATGGAATATCAACAT+AGG + chr3_4:72630272-72630291 Msa0520140:intron 30.0%
! TTCAGACAACATCTCTTTTA+TGG - chr3_4:72630813-72630832 None:intergenic 30.0%
!! TATCTTAGTCTTGTATGATG+AGG + chr3_4:72631078-72631097 Msa0520140:CDS 30.0%
AGGTCAAGAAATTTATGAAC+TGG + chr3_4:72631098-72631117 Msa0520140:CDS 30.0%
GGTCAAGAAATTTATGAACT+GGG + chr3_4:72631099-72631118 Msa0520140:CDS 30.0%
GTCAAGAAATTTATGAACTG+GGG + chr3_4:72631100-72631119 Msa0520140:CDS 30.0%
!! AACTGAGTTCATTTTGATAC+CGG + chr3_4:72631157-72631176 Msa0520140:three_prime_UTR 30.0%
ACCTGTTATACATTACATTG+AGG + chr3_4:72631194-72631213 Msa0520140:three_prime_UTR 30.0%
ACCTCAATGTAATGTATAAC+AGG - chr3_4:72631198-72631217 None:intergenic 30.0%
AGGTAGGAATTGAAATTCGT+TGG - chr3_4:72627001-72627020 None:intergenic 35.0%
! AAGATTTTGCGGCGAATTTA+AGG + chr3_4:72627188-72627207 Msa0520140:five_prime_UTR 35.0%
! CAATTTTCAACGCGATCTTA+TGG + chr3_4:72627291-72627310 Msa0520140:CDS 35.0%
AATAACTTAGCCCTCTCAAT+TGG - chr3_4:72627358-72627377 None:intergenic 35.0%
GCAGACACAAGAAAGTAATT+TGG + chr3_4:72627381-72627400 Msa0520140:CDS 35.0%
AATTTGGCTATTGTTGCTAG+TGG + chr3_4:72627397-72627416 Msa0520140:CDS 35.0%
!! AAGAAGGTGTTATCTCTTTG+TGG + chr3_4:72627470-72627489 Msa0520140:CDS 35.0%
TGCACTCAATTTCTCTCTTA+AGG + chr3_4:72627534-72627553 Msa0520140:CDS 35.0%
CAAAACCATCATAAAAGGGT+GGG - chr3_4:72627665-72627684 None:intergenic 35.0%
ACAAAACCATCATAAAAGGG+TGG - chr3_4:72627666-72627685 None:intergenic 35.0%
!! ATTGCTGATCCATTTTTGAC+TGG + chr3_4:72627710-72627729 Msa0520140:intron 35.0%
GATATCAAGCCAGTCAAAAA+TGG - chr3_4:72627722-72627741 None:intergenic 35.0%
CTGTAACAAGCACCATTATT+TGG + chr3_4:72627843-72627862 Msa0520140:intron 35.0%
CACCATTATTTGGAGACATT+TGG + chr3_4:72627853-72627872 Msa0520140:intron 35.0%
TATATTGTTTGCATACGCCA+CGG + chr3_4:72628108-72628127 Msa0520140:intron 35.0%
AAGAAAATGGATGGGTAAAC+TGG - chr3_4:72628140-72628159 None:intergenic 35.0%
GAACCCTAAAGAAAATGGAT+GGG - chr3_4:72628148-72628167 None:intergenic 35.0%
AAGAGGAACCCTAAAGAAAA+TGG - chr3_4:72628153-72628172 None:intergenic 35.0%
AAGGGCTTGATATATAAGGA+GGG - chr3_4:72628312-72628331 None:intergenic 35.0%
TAAGGGCTTGATATATAAGG+AGG - chr3_4:72628313-72628332 None:intergenic 35.0%
TCCTTATATATCAAGCCCTT+AGG + chr3_4:72628312-72628331 Msa0520140:intron 35.0%
CCTTATATATCAAGCCCTTA+GGG + chr3_4:72628313-72628332 Msa0520140:intron 35.0%
CTTGTTCTTCATTACTCTTC+TGG + chr3_4:72628368-72628387 Msa0520140:intron 35.0%
TATCTTCTTGCCTTTATGTG+TGG + chr3_4:72628431-72628450 Msa0520140:intron 35.0%
CTGAATCCAGAGGATTATAA+TGG + chr3_4:72628500-72628519 Msa0520140:intron 35.0%
AATCCAGAGGATTATAATGG+AGG + chr3_4:72628503-72628522 Msa0520140:intron 35.0%
! ATCCAGAGGATTATAATGGA+GGG + chr3_4:72628504-72628523 Msa0520140:intron 35.0%
!! CTTGCTGTTAAATTCACTCA+AGG + chr3_4:72628710-72628729 Msa0520140:intron 35.0%
AAACTATTAAGAGCTCGGAA+TGG - chr3_4:72628825-72628844 None:intergenic 35.0%
! CTTCTTACTCTCTTGTTTAC+AGG - chr3_4:72629222-72629241 None:intergenic 35.0%
TTTGTGCAAATAATCCCACT+TGG + chr3_4:72629269-72629288 Msa0520140:intron 35.0%
! TCCTTTTAGCCTGAAACAAA+CGG + chr3_4:72629333-72629352 Msa0520140:intron 35.0%
!! GAAGTTGATGTACATTTGAG+AGG - chr3_4:72629403-72629422 None:intergenic 35.0%
! AGACCAAGCTCTCTAATTTT+TGG + chr3_4:72629571-72629590 Msa0520140:intron 35.0%
CTTCCAAAAATTAGAGAGCT+TGG - chr3_4:72629577-72629596 None:intergenic 35.0%
!! CAAGCTCTCTAATTTTTGGA+AGG + chr3_4:72629575-72629594 Msa0520140:intron 35.0%
ACCCAAGACTCTAATTTCTT+GGG + chr3_4:72629603-72629622 Msa0520140:intron 35.0%
TCCCAAGAAATTAGAGTCTT+GGG - chr3_4:72629607-72629626 None:intergenic 35.0%
TTCCCAAGAAATTAGAGTCT+TGG - chr3_4:72629608-72629627 None:intergenic 35.0%
CTAACCAGAGAATGAGAAAA+AGG - chr3_4:72629656-72629675 None:intergenic 35.0%
GGATTACACCAAAAACAGTA+TGG - chr3_4:72629683-72629702 None:intergenic 35.0%
! CACCTTTTAATGGGAGAAAA+AGG + chr3_4:72629902-72629921 Msa0520140:intron 35.0%
TTGCTTACGTAAAAGGAAAC+GGG + chr3_4:72629964-72629983 Msa0520140:intron 35.0%
ATGTTGGCATCATTCTCATA+AGG + chr3_4:72630148-72630167 Msa0520140:intron 35.0%
GTTGATATTCCATCATCTTC+TGG - chr3_4:72630270-72630289 None:intergenic 35.0%
GCAGAACAACATCAAGAAAT+AGG - chr3_4:72630369-72630388 None:intergenic 35.0%
!!! CTATCTCGTGTTTTTTCAAC+AGG + chr3_4:72630475-72630494 Msa0520140:intron 35.0%
! TACAAAAGCATATTAAGGGG+TGG + chr3_4:72630503-72630522 Msa0520140:CDS 35.0%
GCTCCAGAGAAAATATTATC+AGG - chr3_4:72630542-72630561 None:intergenic 35.0%
GGAATATAGTGGCTAAGAAA+TGG - chr3_4:72630697-72630716 None:intergenic 35.0%
ATACACAGAGGTCTTTACTT+CGG + chr3_4:72630776-72630795 Msa0520140:CDS 35.0%
TGAAGAATCTAAACCTGAGT+TGG + chr3_4:72630829-72630848 Msa0520140:CDS 35.0%
AGGAAAATCTATCGAACAGA+GGG + chr3_4:72630995-72631014 Msa0520140:CDS 35.0%
ATGAACTCAGTTAACTACGT+TGG - chr3_4:72631149-72631168 None:intergenic 35.0%
CAGGTTGTAATGAAAGTAAC+CGG - chr3_4:72631179-72631198 None:intergenic 35.0%
TGAATGGCATTTCAACTCAA+AGG + chr3_4:72631277-72631296 Msa0520140:three_prime_UTR 35.0%
TTAGAAGCCAATGATTGATG+AGG + chr3_4:72631362-72631381 Msa0520140:three_prime_UTR 35.0%
TAGAAGCCAATGATTGATGA+GGG + chr3_4:72631363-72631382 Msa0520140:three_prime_UTR 35.0%
ATTACACCCTCATCAATCAT+TGG - chr3_4:72631372-72631391 None:intergenic 35.0%
TGAAATGCGTGTTGTGTGTA+TGG - chr3_4:72627036-72627055 None:intergenic 40.0%
GAATTTAAGGATGAGTGGAG+AGG + chr3_4:72627201-72627220 Msa0520140:exon 40.0%
AATTGTGGCACCAATTGAGA+GGG + chr3_4:72627345-72627364 Msa0520140:CDS 40.0%
ATTCGTACTGTTAGGGAAGA+AGG + chr3_4:72627454-72627473 Msa0520140:CDS 40.0%
GAGAAATTGAGTGCAACAGA+AGG - chr3_4:72627529-72627548 None:intergenic 40.0%
! TTCTTCCCACCCTTTTATGA+TGG + chr3_4:72627657-72627676 Msa0520140:intron 40.0%
ATGCAGGCAATGTTGAAAAC+TGG + chr3_4:72627900-72627919 Msa0520140:intron 40.0%
AAAGAACCCTTCAACAGATG+TGG + chr3_4:72628024-72628043 Msa0520140:intron 40.0%
CATCTTCCACATCTGTTGAA+GGG - chr3_4:72628033-72628052 None:intergenic 40.0%
ACATCTTCCACATCTGTTGA+AGG - chr3_4:72628034-72628053 None:intergenic 40.0%
GGAACCCTAAAGAAAATGGA+TGG - chr3_4:72628149-72628168 None:intergenic 40.0%
ATAGGAAAATGCACCGTAGA+AGG + chr3_4:72628178-72628197 Msa0520140:intron 40.0%
!! CCTACTGTTTCTACCTTCTA+CGG - chr3_4:72628194-72628213 None:intergenic 40.0%
TAGAAGGTAGAAACAGTAGG+TGG + chr3_4:72628194-72628213 Msa0520140:intron 40.0%
AGAAACAGTAGGTGGATACT+TGG + chr3_4:72628202-72628221 Msa0520140:intron 40.0%
CCCTAAGGGCTTGATATATA+AGG - chr3_4:72628316-72628335 None:intergenic 40.0%
! ACAACCCTTTTAGATTCTGG+GGG - chr3_4:72628400-72628419 None:intergenic 40.0%
! CACAACCCTTTTAGATTCTG+GGG - chr3_4:72628401-72628420 None:intergenic 40.0%
! CCACAACCCTTTTAGATTCT+GGG - chr3_4:72628402-72628421 None:intergenic 40.0%
! TCCACAACCCTTTTAGATTC+TGG - chr3_4:72628403-72628422 None:intergenic 40.0%
GAATCTAAAAGGGTTGTGGA+TGG + chr3_4:72628403-72628422 Msa0520140:intron 40.0%
!! TACTCTGAAACTGAATCCAG+AGG + chr3_4:72628490-72628509 Msa0520140:intron 40.0%
ATCCCTCCATTATAATCCTC+TGG - chr3_4:72628509-72628528 None:intergenic 40.0%
ACTGAGGATGAATCGCTAAT+AGG - chr3_4:72628567-72628586 None:intergenic 40.0%
CTTCATGGCATCACAAGTAT+GGG - chr3_4:72628599-72628618 None:intergenic 40.0%
ACTTCATGGCATCACAAGTA+TGG - chr3_4:72628600-72628619 None:intergenic 40.0%
TGCGGTGAAGGACAAATAAA+AGG - chr3_4:72628739-72628758 None:intergenic 40.0%
CAGGAATTATAATGCGGTGA+AGG - chr3_4:72628751-72628770 None:intergenic 40.0%
ATAAGGGATGGAACACTACT+AGG - chr3_4:72628884-72628903 None:intergenic 40.0%
GTACCAGGGAGAAGTAATAA+GGG - chr3_4:72628900-72628919 None:intergenic 40.0%
ACCTATGTCCGAGAAGAAAA+AGG + chr3_4:72628918-72628937 Msa0520140:intron 40.0%
! ACCTTTTTCTTCTCGGACAT+AGG - chr3_4:72628922-72628941 None:intergenic 40.0%
CTTTAGCCCTTTCACTGATA+GGG + chr3_4:72629065-72629084 Msa0520140:intron 40.0%
TTTAGCCCTTTCACTGATAG+GGG + chr3_4:72629066-72629085 Msa0520140:intron 40.0%
CAAGGTCAGATTTCGGTATA+GGG - chr3_4:72629198-72629217 None:intergenic 40.0%
! CCTTTTAGCCTGAAACAAAC+GGG + chr3_4:72629334-72629353 Msa0520140:intron 40.0%
GACCCAAGACTCTAATTTCT+TGG + chr3_4:72629602-72629621 Msa0520140:intron 40.0%
AAAAAGGAACTGATGCATCG+TGG + chr3_4:72629918-72629937 Msa0520140:intron 40.0%
AAAAGGAACTGATGCATCGT+GGG + chr3_4:72629919-72629938 Msa0520140:intron 40.0%
TGCTTACGTAAAAGGAAACG+GGG + chr3_4:72629965-72629984 Msa0520140:intron 40.0%
! GCATTGACATAGATCAGTTG+CGG - chr3_4:72630347-72630366 None:intergenic 40.0%
! AAAAGCATATTAAGGGGTGG+AGG + chr3_4:72630506-72630525 Msa0520140:CDS 40.0%
!! TGGAGCATCAGCTAATTTTG+TGG + chr3_4:72630556-72630575 Msa0520140:CDS 40.0%
AGGTTGTACATCACTCATCT+TGG + chr3_4:72630592-72630611 Msa0520140:CDS 40.0%
CTAAGAAATGGTGAATGCCT+CGG - chr3_4:72630685-72630704 None:intergenic 40.0%
GCCACTATATTCCAGAAAGA+CGG + chr3_4:72630704-72630723 Msa0520140:CDS 40.0%
CCACTATATTCCAGAAAGAC+GGG + chr3_4:72630705-72630724 Msa0520140:CDS 40.0%
CACTATATTCCAGAAAGACG+GGG + chr3_4:72630706-72630725 Msa0520140:CDS 40.0%
GAGGAAAATCTATCGAACAG+AGG + chr3_4:72630994-72631013 Msa0520140:CDS 40.0%
!! GGATTGATTTCGTTTTACCG+CGG + chr3_4:72631016-72631035 Msa0520140:CDS 40.0%
GAGCAGTTTCGAATGTGTTT+AGG + chr3_4:72631038-72631057 Msa0520140:CDS 40.0%
! CTCAGTTAACTACGTTGGTT+TGG - chr3_4:72631144-72631163 None:intergenic 40.0%
AATGCGTGTTGTGTGTATGG+TGG - chr3_4:72627033-72627052 None:intergenic 45.0%
TTTCAACGCGATCTTATGGC+TGG + chr3_4:72627295-72627314 Msa0520140:CDS 45.0%
TGGTGCGGTTCATACAATTG+TGG + chr3_4:72627330-72627349 Msa0520140:CDS 45.0%
CAATTGTGGCACCAATTGAG+AGG + chr3_4:72627344-72627363 Msa0520140:CDS 45.0%
ATCTCTTTGTGGCGTGGTAA+TGG + chr3_4:72627481-72627500 Msa0520140:CDS 45.0%
TCTCTTTGTGGCGTGGTAAT+GGG + chr3_4:72627482-72627501 Msa0520140:CDS 45.0%
AACTAGCATGGCTTGAGAAG+AGG + chr3_4:72627794-72627813 Msa0520140:intron 45.0%
ACTAGCATGGCTTGAGAAGA+GGG + chr3_4:72627795-72627814 Msa0520140:intron 45.0%
TCTCATGAAAACTGGGATGC+AGG + chr3_4:72627884-72627903 Msa0520140:intron 45.0%
GGTTGTGTATGCTGTCAACT+AGG + chr3_4:72627921-72627940 Msa0520140:intron 45.0%
TATGCTGTCAACTAGGCAGT+TGG + chr3_4:72627928-72627947 Msa0520140:intron 45.0%
ATGGATACTCTCGTACCATG+AGG - chr3_4:72628075-72628094 None:intergenic 45.0%
! TACGGTGCATTTTCCTATCG+CGG - chr3_4:72628176-72628195 None:intergenic 45.0%
CCGTAGAAGGTAGAAACAGT+AGG + chr3_4:72628191-72628210 Msa0520140:intron 45.0%
CAGTAGGTGGATACTTGGAA+AGG + chr3_4:72628207-72628226 Msa0520140:intron 45.0%
TCCGACGCTCAAGTCAATTA+GGG + chr3_4:72628233-72628252 Msa0520140:intron 45.0%
!! ACCCTAATTGACTTGAGCGT+CGG - chr3_4:72628237-72628256 None:intergenic 45.0%
GCCTATGCAATACTCCCTAA+GGG - chr3_4:72628330-72628349 None:intergenic 45.0%
AGCCTATGCAATACTCCCTA+AGG - chr3_4:72628331-72628350 None:intergenic 45.0%
TGCATCCCCCAGAATCTAAA+AGG + chr3_4:72628392-72628411 Msa0520140:intron 45.0%
GCATCCCCCAGAATCTAAAA+GGG + chr3_4:72628393-72628412 Msa0520140:intron 45.0%
CCCAGAATCTAAAAGGGTTG+TGG + chr3_4:72628399-72628418 Msa0520140:intron 45.0%
TCTAAAAGGGTTGTGGATGG+TGG + chr3_4:72628406-72628425 Msa0520140:intron 45.0%
CGGTGATTGTCACACAATCA+CGG - chr3_4:72628463-72628482 None:intergenic 45.0%
CGTGATTGTGTGACAATCAC+CGG + chr3_4:72628461-72628480 Msa0520140:intron 45.0%
GTGATTGTGTGACAATCACC+GGG + chr3_4:72628462-72628481 Msa0520140:intron 45.0%
TGATTGTGTGACAATCACCG+GGG + chr3_4:72628463-72628482 Msa0520140:intron 45.0%
! CAGTTTCAGAGTATCTTCCC+CGG - chr3_4:72628483-72628502 None:intergenic 45.0%
AATCGCTAATAGGCCCCATA+AGG - chr3_4:72628557-72628576 None:intergenic 45.0%
TGGCATCACAAGTATGGGAT+GGG - chr3_4:72628594-72628613 None:intergenic 45.0%
ATGGCATCACAAGTATGGGA+TGG - chr3_4:72628595-72628614 None:intergenic 45.0%
ACTTGTGATGCCATGAAGTG+AGG + chr3_4:72628601-72628620 Msa0520140:intron 45.0%
CTTGTGATGCCATGAAGTGA+GGG + chr3_4:72628602-72628621 Msa0520140:intron 45.0%
! GCTTTAGTTCCCTCACTTCA+TGG - chr3_4:72628614-72628633 None:intergenic 45.0%
CAGGGAGAAGTAATAAGGGA+TGG - chr3_4:72628896-72628915 None:intergenic 45.0%
CATCCCTTATTACTTCTCCC+TGG + chr3_4:72628894-72628913 Msa0520140:intron 45.0%
GGTACCAGGGAGAAGTAATA+AGG - chr3_4:72628901-72628920 None:intergenic 45.0%
CCTATCAGTGAAAGGGCTAA+AGG - chr3_4:72629067-72629086 None:intergenic 45.0%
CCTTTAGCCCTTTCACTGAT+AGG + chr3_4:72629064-72629083 Msa0520140:intron 45.0%
TTAGCCCTTTCACTGATAGG+GGG + chr3_4:72629067-72629086 Msa0520140:intron 45.0%
AAGTCCCCCTATCAGTGAAA+GGG - chr3_4:72629074-72629093 None:intergenic 45.0%
! TAGGGGGACTTCCTTTTCTT+TGG + chr3_4:72629083-72629102 Msa0520140:intron 45.0%
TTTCGGTATAGGGATGGAGA+AGG - chr3_4:72629188-72629207 None:intergenic 45.0%
GTCAGATTTCGGTATAGGGA+TGG - chr3_4:72629194-72629213 None:intergenic 45.0%
GCAAGGTCAGATTTCGGTAT+AGG - chr3_4:72629199-72629218 None:intergenic 45.0%
TACAGGGCAAGGTCAGATTT+CGG - chr3_4:72629205-72629224 None:intergenic 45.0%
! ACTCTCTTGTTTACAGGGCA+AGG - chr3_4:72629216-72629235 None:intergenic 45.0%
TCCCACTTGGAGTGATTTCA+AGG + chr3_4:72629282-72629301 Msa0520140:intron 45.0%
GCCTTGAAATCACTCCAAGT+GGG - chr3_4:72629286-72629305 None:intergenic 45.0%
AGCCTTGAAATCACTCCAAG+TGG - chr3_4:72629287-72629306 None:intergenic 45.0%
CCCGTTTGTTTCAGGCTAAA+AGG - chr3_4:72629337-72629356 None:intergenic 45.0%
GGGCAATTTGAATTGTGTGC+TGG + chr3_4:72629376-72629395 Msa0520140:intron 45.0%
GCACGGAAGTTTGTGAAATG+TGG + chr3_4:72630213-72630232 Msa0520140:intron 45.0%
! GCATCAGCTAATTTTGTGGC+TGG + chr3_4:72630560-72630579 Msa0520140:CDS 45.0%
!! CCCGTCTTTCTGGAATATAG+TGG - chr3_4:72630708-72630727 None:intergenic 45.0%
TATTCCAGAAAGACGGGGTA+CGG + chr3_4:72630711-72630730 Msa0520140:CDS 45.0%
TCCTGCATCACTACATGGTA+TGG + chr3_4:72630751-72630770 Msa0520140:CDS 45.0%
ACCATACCATGTAGTGATGC+AGG - chr3_4:72630755-72630774 None:intergenic 45.0%
CATGGTATGGTGATACACAG+AGG + chr3_4:72630764-72630783 Msa0520140:CDS 45.0%
ACAGAGGTCTTTACTTCGGA+GGG + chr3_4:72630780-72630799 Msa0520140:CDS 45.0%
! AATGATGATGCAGTCTGGCA+TGG + chr3_4:72630937-72630956 Msa0520140:CDS 45.0%
! TCGAATGTGTTTAGGAGCAC+TGG + chr3_4:72631046-72631065 Msa0520140:CDS 45.0%
AGCAAATATTGTCATGGCCG+AGG + chr3_4:72631332-72631351 Msa0520140:three_prime_UTR 45.0%
GCAAATATTGTCATGGCCGA+GGG + chr3_4:72631333-72631352 Msa0520140:three_prime_UTR 45.0%
TGGCTTCTAATCTAGTCCCT+CGG - chr3_4:72631352-72631371 None:intergenic 45.0%
TGTTGTGTGTATGGTGGCTG+CGG - chr3_4:72627027-72627046 None:intergenic 50.0%
GCGGCGAATTTAAGGATGAG+TGG + chr3_4:72627196-72627215 Msa0520140:exon 50.0%
! GGTGTTATCTCTTTGTGGCG+TGG + chr3_4:72627475-72627494 Msa0520140:CDS 50.0%
AGAAGAGGGATGACGAGAGT+TGG + chr3_4:72627809-72627828 Msa0520140:intron 50.0%
! GCATTTTCCTATCGCGGAAG+AGG - chr3_4:72628170-72628189 None:intergenic 50.0%
CTCCGACGCTCAAGTCAATT+AGG + chr3_4:72628232-72628251 Msa0520140:intron 50.0%
!! GCCCTTAGGGAGTATTGCAT+AGG + chr3_4:72628326-72628345 Msa0520140:intron 50.0%
TTGTCACACAATCACGGCCA+CGG - chr3_4:72628457-72628476 None:intergenic 50.0%
TCCGATCAAAACACGGGTCA+GGG - chr3_4:72628636-72628655 None:intergenic 50.0%
ATCCGATCAAAACACGGGTC+AGG - chr3_4:72628637-72628656 None:intergenic 50.0%
GCTCGGAATGGTGAACTTGA+TGG - chr3_4:72628813-72628832 None:intergenic 50.0%
GGATGGAACACTACTAGGCA+AGG - chr3_4:72628879-72628898 None:intergenic 50.0%
CTTCTCGGACATAGGTACCA+GGG - chr3_4:72628914-72628933 None:intergenic 50.0%
TCTTCTCGGACATAGGTACC+AGG - chr3_4:72628915-72628934 None:intergenic 50.0%
GAAGTCCCCCTATCAGTGAA+AGG - chr3_4:72629075-72629094 None:intergenic 50.0%
CAGTCAGCATTGCAAACAGC+AGG - chr3_4:72629146-72629165 None:intergenic 50.0%
TTAGCCTGAAACAAACGGGC+AGG + chr3_4:72629338-72629357 Msa0520140:intron 50.0%
TAGCCTGAAACAAACGGGCA+GGG + chr3_4:72629339-72629358 Msa0520140:intron 50.0%
ACCAGTCGTCGCAACTATCA+TGG + chr3_4:72629485-72629504 Msa0520140:intron 50.0%
TCCATGATAGTTGCGACGAC+TGG - chr3_4:72629489-72629508 None:intergenic 50.0%
!! AAACGGGGCACTTTTCAGTC+AGG + chr3_4:72629980-72629999 Msa0520140:intron 50.0%
GGGTGTGTGCAATATCAAGG+GGG - chr3_4:72630622-72630641 None:intergenic 50.0%
CGGGTGTGTGCAATATCAAG+GGG - chr3_4:72630623-72630642 None:intergenic 50.0%
GCGGGTGTGTGCAATATCAA+GGG - chr3_4:72630624-72630643 None:intergenic 50.0%
TTCCAATGTCAGCAGCAAGG+CGG - chr3_4:72630643-72630662 None:intergenic 50.0%
TCCTTCCAATGTCAGCAGCA+AGG - chr3_4:72630646-72630665 None:intergenic 50.0%
TGCTGCTGACATTGGAAGGA+CGG + chr3_4:72630646-72630665 Msa0520140:CDS 50.0%
ATTCCAGAAAGACGGGGTAC+GGG + chr3_4:72630712-72630731 Msa0520140:CDS 50.0%
GGTCTTCCTGCATCACTACA+TGG + chr3_4:72630746-72630765 Msa0520140:CDS 50.0%
CACAGAGGTCTTTACTTCGG+AGG + chr3_4:72630779-72630798 Msa0520140:CDS 50.0%
! CTAAACCTGAGTTGGCGTTG+TGG + chr3_4:72630837-72630856 Msa0520140:CDS 50.0%
CAAGCAGTTACAACCTCAGC+CGG + chr3_4:72630878-72630897 Msa0520140:CDS 50.0%
! TAGCGGATACGATACCAGAC+CGG - chr3_4:72630900-72630919 None:intergenic 50.0%
ATCCGCTAGACACAGTTCGT+CGG + chr3_4:72630912-72630931 Msa0520140:CDS 50.0%
! CGGAGAATGATGATGCAGTC+TGG + chr3_4:72630932-72630951 Msa0520140:CDS 50.0%
!! TCGAGGGTGCTATTGTACAC+CGG - chr3_4:72630968-72630987 None:intergenic 50.0%
! GATTTTCCTCCAGCAGTCGA+GGG - chr3_4:72630984-72631003 None:intergenic 50.0%
! AGATTTTCCTCCAGCAGTCG+AGG - chr3_4:72630985-72631004 None:intergenic 50.0%
ACACATTCGAAACTGCTCCG+CGG - chr3_4:72631036-72631055 None:intergenic 50.0%
ACGCGATCTTATGGCTGGTG+CGG + chr3_4:72627300-72627319 Msa0520140:CDS 55.0%
TCTTATGGCTGGTGCGGTGA+TGG + chr3_4:72627306-72627325 Msa0520140:CDS 55.0%
CTTATGGCTGGTGCGGTGAT+GGG + chr3_4:72627307-72627326 Msa0520140:CDS 55.0%
TAGGGTTCCTCTTCCGCGAT+AGG + chr3_4:72628160-72628179 Msa0520140:intron 55.0%
CTTGCCTTTATGTGTGGCCG+TGG + chr3_4:72628437-72628456 Msa0520140:intron 55.0%
!! GTATGGGATGGGCTAGACTG+AGG - chr3_4:72628583-72628602 None:intergenic 55.0%
!!! GCCCTGACCCGTGTTTTGAT+CGG + chr3_4:72628632-72628651 Msa0520140:intron 55.0%
! AGGGCTAAAGGTGTGCATGC+TGG - chr3_4:72629055-72629074 None:intergenic 55.0%
GGGCAGGGAGGAAGAATACT+GGG + chr3_4:72629354-72629373 Msa0520140:intron 55.0%
GGCAGGGAGGAAGAATACTG+GGG + chr3_4:72629355-72629374 Msa0520140:intron 55.0%
GCAGGGAGGAAGAATACTGG+GGG + chr3_4:72629356-72629375 Msa0520140:intron 55.0%
GAACTGATGCATCGTGGGCT+AGG + chr3_4:72629924-72629943 Msa0520140:intron 55.0%
!! GGGGCACTTTTCAGTCAGGT+GGG + chr3_4:72629984-72630003 Msa0520140:intron 55.0%
GGCGGGTGTGTGCAATATCA+AGG - chr3_4:72630625-72630644 None:intergenic 55.0%
TCCAATGTCAGCAGCAAGGC+GGG - chr3_4:72630642-72630661 None:intergenic 55.0%
GCCTTGCTGCTGACATTGGA+AGG + chr3_4:72630642-72630661 Msa0520140:CDS 55.0%
! ACGGAAGTGCGTCAATTCCG+AGG + chr3_4:72630665-72630684 Msa0520140:CDS 55.0%
TTCCAGAAAGACGGGGTACG+GGG + chr3_4:72630713-72630732 Msa0520140:CDS 55.0%
AGTTGGCGTTGTGGAAGCGA+TGG + chr3_4:72630846-72630865 Msa0520140:CDS 55.0%
AGTTACAACCTCAGCCGGTC+TGG + chr3_4:72630883-72630902 Msa0520140:CDS 55.0%
ATACGATACCAGACCGGCTG+AGG - chr3_4:72630894-72630913 None:intergenic 55.0%
CTCCGACGAACTGTGTCTAG+CGG - chr3_4:72630917-72630936 None:intergenic 55.0%
GCAGTCTGGCATGGAACATC+CGG + chr3_4:72630946-72630965 Msa0520140:CDS 55.0%
ACAATAGCACCCTCGACTGC+TGG + chr3_4:72630972-72630991 Msa0520140:CDS 55.0%
ATGGTGGCTGCGGACAAGGT+AGG - chr3_4:72627017-72627036 None:intergenic 60.0%
GTGTATGGTGGCTGCGGACA+AGG - chr3_4:72627021-72627040 None:intergenic 60.0%
!! GGGTAAACTGGTGCTGACCG+TGG - chr3_4:72628128-72628147 None:intergenic 60.0%
ACGGCCACGGCCACACATAA+AGG - chr3_4:72628444-72628463 None:intergenic 60.0%
CCTCCCTGCCCGTTTGTTTC+AGG - chr3_4:72629345-72629364 None:intergenic 60.0%
CCTGAAACAAACGGGCAGGG+AGG + chr3_4:72629342-72629361 Msa0520140:intron 60.0%
CGGGCAGGGAGGAAGAATAC+TGG + chr3_4:72629353-72629372 Msa0520140:intron 60.0%
!! GCATCGTGGGCTAGGCATCT+TGG + chr3_4:72629932-72629951 Msa0520140:intron 60.0%
!! CGGGGCACTTTTCAGTCAGG+TGG + chr3_4:72629983-72630002 Msa0520140:intron 60.0%
TTTGTGGCTGGAGCTGCAGC+AGG + chr3_4:72630572-72630591 Msa0520140:CDS 60.0%
ACCCGCCTTGCTGCTGACAT+TGG + chr3_4:72630638-72630657 Msa0520140:CDS 60.0%
TCCAGAAAGACGGGGTACGG+GGG + chr3_4:72630714-72630733 Msa0520140:CDS 60.0%
ACGGGGTACGGGGGATTTAC+AGG + chr3_4:72630723-72630742 Msa0520140:CDS 60.0%
CGGGGTACGGGGGATTTACA+GGG + chr3_4:72630724-72630743 Msa0520140:CDS 60.0%
GGGGTACGGGGGATTTACAG+GGG + chr3_4:72630725-72630744 Msa0520140:CDS 60.0%
CGCTTCCACAACGCCAACTC+AGG - chr3_4:72630845-72630864 None:intergenic 60.0%
GGCGTTGTGGAAGCGATGGA+TGG + chr3_4:72630850-72630869 Msa0520140:CDS 60.0%
ATAGCACCCTCGACTGCTGG+AGG + chr3_4:72630975-72630994 Msa0520140:CDS 60.0%
!! ATGGCTGGTGCGGTGATGGG+TGG + chr3_4:72627310-72627329 Msa0520140:CDS 65.0%
!! TGGTGCGGTGATGGGTGGTG+CGG + chr3_4:72627315-72627334 Msa0520140:CDS 65.0%
TCCCCCGTACCCCGTCTTTC+TGG - chr3_4:72630718-72630737 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 72626964 72631496 72626964 ID=Msa0520140;Name=Msa0520140
chr3_4 mRNA 72626964 72631496 72626964 ID=Msa0520140-mRNA-1;Parent=Msa0520140;Name=Msa0520140-mRNA-1;_AED=0.01;_eAED=0.01;_QI=247|1|1|1|1|1|2|364|326
chr3_4 exon 72626964 72627555 72626964 ID=Msa0520140-mRNA-1:exon:20104;Parent=Msa0520140-mRNA-1
chr3_4 exon 72630497 72631496 72630497 ID=Msa0520140-mRNA-1:exon:20105;Parent=Msa0520140-mRNA-1
chr3_4 five_prime_UTR 72626964 72627210 72626964 ID=Msa0520140-mRNA-1:five_prime_utr;Parent=Msa0520140-mRNA-1
chr3_4 CDS 72627211 72627555 72627211 ID=Msa0520140-mRNA-1:cds;Parent=Msa0520140-mRNA-1
chr3_4 CDS 72630497 72631132 72630497 ID=Msa0520140-mRNA-1:cds;Parent=Msa0520140-mRNA-1
chr3_4 three_prime_UTR 72631133 72631496 72631133 ID=Msa0520140-mRNA-1:three_prime_utr;Parent=Msa0520140-mRNA-1
Gene Sequence

>Msa0520140

ATGAGTGGAGAGGATGAAGACCCAGAAGAAAAAAAAGCTTTGAATTTGAAGCGAAATTCTTTTTCTTCTTCACGTTTCAACAATTTTCAACGCGATCTTATGGCTGGTGCGGTGATGGGTGGTGCGGTTCATACAATTGTGGCACCAATTGAGAGGGCTAAGTTATTGTTGCAGACACAAGAAAGTAATTTGGCTATTGTTGCTAGTGGTAGAAGAAAATTCAAAGGGATGTTTGATTGTATTATTCGTACTGTTAGGGAAGAAGGTGTTATCTCTTTGTGGCGTGGTAATGGGAGTAGTGTTCTTCGTTATTATCCTTCTGTTGCACTCAATTTCTCTCTTAAGGATCTTTACAAAAGCATATTAAGGGGTGGAGGAAACTCTAATCCTGATAATATTTTCTCTGGAGCATCAGCTAATTTTGTGGCTGGAGCTGCAGCAGGTTGTACATCACTCATCTTGGTGTACCCCCTTGATATTGCACACACCCGCCTTGCTGCTGACATTGGAAGGACGGAAGTGCGTCAATTCCGAGGCATTCACCATTTCTTAGCCACTATATTCCAGAAAGACGGGGTACGGGGGATTTACAGGGGTCTTCCTGCATCACTACATGGTATGGTGATACACAGAGGTCTTTACTTCGGAGGGTTTGACACCATAAAAGAGATGTTGTCTGAAGAATCTAAACCTGAGTTGGCGTTGTGGAAGCGATGGATGGTAGCTCAAGCAGTTACAACCTCAGCCGGTCTGGTATCGTATCCGCTAGACACAGTTCGTCGGAGAATGATGATGCAGTCTGGCATGGAACATCCGGTGTACAATAGCACCCTCGACTGCTGGAGGAAAATCTATCGAACAGAGGGATTGATTTCGTTTTACCGCGGAGCAGTTTCGAATGTGTTTAGGAGCACTGGAGCTGCAGCTATCTTAGTCTTGTATGATGAGGTCAAGAAATTTATGAACTGGGGAAGATTTTAA
Protein sequence

>Msa0520140

MSGEDEDPEEKKALNLKRNSFSSSRFNNFQRDLMAGAVMGGAVHTIVAPIERAKLLLQTQESNLAIVASGRRKFKGMFDCIIRTVREEGVISLWRGNGSSVLRYYPSVALNFSLKDLYKSILRGGGNSNPDNIFSGASANFVAGAAAGCTSLILVYPLDIAHTRLAADIGRTEVRQFRGIHHFLATIFQKDGVRGIYRGLPASLHGMVIHRGLYFGGFDTIKEMLSEESKPELALWKRWMVAQAVTTSAGLVSYPLDTVRRRMMMQSGMEHPVYNSTLDCWRKIYRTEGLISFYRGAVSNVFRSTGAAAILVLYDEVKKFMNWGRF*