AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0836500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0836500 MtrunA17_Chr5g0402191 93.734 383 3 1 109 491 36 397 0.0 721
Msa0836500 MtrunA17_Chr5g0402191 29.581 382 176 7 1 303 1 368 2.61e-37 141
Msa0836500 MtrunA17_Chr8g0375101 68.286 391 57 5 111 491 38 371 7.40e-173 491
Msa0836500 MtrunA17_Chr8g0375101 30.252 357 150 9 1 273 1 342 2.00e-36 138
Msa0836500 MtrunA17_Chr3g0135111 29.487 234 111 4 166 395 11 194 5.71e-23 100
Msa0836500 MtrunA17_Chr3g0135111 32.680 153 83 2 110 242 43 195 6.50e-19 88.6
Msa0836500 MtrunA17_Chr2g0290191 37.415 147 77 3 111 242 38 184 2.54e-22 99.8
Msa0836500 MtrunA17_Chr2g0290191 37.500 112 67 1 320 431 5 113 1.10e-11 67.0
Msa0836500 MtrunA17_Chr3g0101061 34.483 145 82 2 111 242 74 218 1.67e-21 97.4
Msa0836500 MtrunA17_Chr3g0101061 25.311 241 125 5 156 395 31 217 1.20e-16 82.4
Msa0836500 MtrunA17_Chr6g0449481 32.609 138 91 1 109 244 77 214 2.23e-21 95.9
Msa0836500 MtrunA17_Chr1g0186351 34.641 153 81 2 109 242 38 190 6.70e-21 95.5
Msa0836500 MtrunA17_Chr1g0186351 43.182 88 48 2 318 404 111 197 6.36e-12 67.8
Msa0836500 MtrunA17_Chr5g0447761 35.172 145 81 2 111 242 40 184 1.95e-20 94.0
Msa0836500 MtrunA17_Chr5g0447761 26.407 231 115 5 166 395 7 183 1.67e-16 82.0
Msa0836500 MtrunA17_Chr3g0120721 31.343 134 90 1 111 242 52 185 4.42e-20 91.7
Msa0836500 MtrunA17_Chr4g0026301 24.903 257 166 6 8 243 114 364 2.51e-15 78.6
Msa0836500 MtrunA17_Chr7g0217261 25.338 296 194 9 8 281 353 643 4.70e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0836500 AT4G36960.1 65.084 358 85 5 111 449 37 373 1.29e-151 437
Msa0836500 AT4G36960.1 32.240 183 89 5 3 160 2 174 4.29e-19 89.4
Msa0836500 AT4G36960.2 65.084 358 85 5 111 449 37 373 1.29e-151 437
Msa0836500 AT4G36960.2 32.240 183 89 5 3 160 2 174 4.29e-19 89.4
Msa0836500 AT3G07810.1 36.913 149 79 2 109 242 38 186 2.50e-22 100
Msa0836500 AT3G07810.2 36.913 149 79 2 109 242 38 186 2.64e-22 100
Msa0836500 AT4G26650.2 34.211 152 80 2 111 242 46 197 2.89e-22 99.8
Msa0836500 AT4G26650.2 36.975 119 63 2 320 431 13 126 4.88e-11 65.1
Msa0836500 AT4G26650.1 34.211 152 80 2 111 242 49 200 3.06e-22 99.8
Msa0836500 AT4G26650.1 36.975 119 63 2 320 431 16 129 5.47e-11 65.1
Msa0836500 AT5G55550.5 33.557 149 82 2 111 242 40 188 6.99e-22 98.6
Msa0836500 AT5G55550.5 26.840 231 118 4 166 395 7 187 1.66e-17 85.1
Msa0836500 AT5G55550.4 33.557 149 82 2 111 242 40 188 6.99e-22 98.6
Msa0836500 AT5G55550.4 26.840 231 118 4 166 395 7 187 1.66e-17 85.1
Msa0836500 AT5G55550.9 33.557 149 82 2 111 242 40 188 6.99e-22 98.6
Msa0836500 AT5G55550.9 26.840 231 118 4 166 395 7 187 1.66e-17 85.1
Msa0836500 AT5G55550.7 33.557 149 82 2 111 242 40 188 6.99e-22 98.6
Msa0836500 AT5G55550.7 26.840 231 118 4 166 395 7 187 1.66e-17 85.1
Msa0836500 AT5G55550.1 33.557 149 82 2 111 242 40 188 6.99e-22 98.6
Msa0836500 AT5G55550.1 26.840 231 118 4 166 395 7 187 1.66e-17 85.1
Msa0836500 AT5G55550.2 33.557 149 82 2 111 242 40 188 7.01e-22 98.6
Msa0836500 AT5G55550.2 26.840 231 118 4 166 395 7 187 1.55e-17 85.5
Msa0836500 AT5G55550.3 33.557 149 82 2 111 242 40 188 7.01e-22 98.6
Msa0836500 AT5G55550.3 26.840 231 118 4 166 395 7 187 1.55e-17 85.5
Msa0836500 AT5G55550.6 33.557 149 82 2 111 242 40 188 7.01e-22 98.6
Msa0836500 AT5G55550.6 26.840 231 118 4 166 395 7 187 1.55e-17 85.5
Msa0836500 AT5G55550.11 33.557 149 82 2 111 242 40 188 7.01e-22 98.6
Msa0836500 AT5G55550.11 26.840 231 118 4 166 395 7 187 1.55e-17 85.5
Msa0836500 AT1G17640.2 37.415 147 87 2 109 250 98 244 1.67e-21 96.7
Msa0836500 AT1G17640.1 37.415 147 87 2 109 250 98 244 1.67e-21 96.7
Msa0836500 AT1G17640.3 37.415 147 87 2 109 250 98 244 1.67e-21 96.7
Msa0836500 AT4G14300.1 34.437 151 82 2 109 242 38 188 4.78e-21 95.5
Msa0836500 AT4G14300.1 26.609 233 120 3 166 397 7 189 7.36e-17 83.2
Msa0836500 AT4G14300.2 34.437 151 82 2 109 242 38 188 4.78e-21 95.5
Msa0836500 AT4G14300.2 26.609 233 120 3 166 397 7 189 7.36e-17 83.2
Msa0836500 AT2G33410.1 34.899 149 80 2 111 242 40 188 4.00e-20 92.8
Msa0836500 AT2G33410.1 24.893 233 124 5 166 397 7 189 7.60e-14 73.6
Msa0836500 AT5G47620.1 34.483 145 82 2 111 242 40 184 5.65e-19 89.7
Msa0836500 AT5G47620.1 25.498 251 130 6 166 415 7 201 4.35e-15 77.8
Msa0836500 AT5G47620.1 39.474 114 64 1 318 431 5 113 4.53e-12 68.6
Msa0836500 AT5G47620.2 34.483 145 82 2 111 242 40 184 5.65e-19 89.7
Msa0836500 AT5G47620.2 25.498 251 130 6 166 415 7 201 4.35e-15 77.8
Msa0836500 AT5G47620.2 39.474 114 64 1 318 431 5 113 4.53e-12 68.6
Msa0836500 AT5G47620.5 34.483 145 82 2 111 242 40 184 5.65e-19 89.7
Msa0836500 AT5G47620.5 25.498 251 130 6 166 415 7 201 4.35e-15 77.8
Msa0836500 AT5G47620.5 39.474 114 64 1 318 431 5 113 4.53e-12 68.6
Msa0836500 AT3G13224.3 33.813 139 88 2 111 245 44 182 6.63e-19 88.6
Msa0836500 AT3G13224.3 36.709 79 50 0 166 244 11 89 7.01e-11 64.3
Msa0836500 AT3G13224.2 33.813 139 88 2 111 245 53 191 7.73e-19 88.6
Msa0836500 AT3G13224.2 36.709 79 50 0 166 244 20 98 7.92e-11 63.9
Msa0836500 AT3G13224.1 30.818 159 100 3 111 267 53 203 2.61e-18 84.3
Msa0836500 AT3G13224.1 36.709 79 50 0 166 244 20 98 3.14e-11 63.9
Msa0836500 AT5G40490.1 31.343 134 90 1 111 242 76 209 5.15e-18 86.7
Msa0836500 AT5G40490.2 31.343 134 90 1 111 242 59 192 9.60e-18 85.5
Msa0836500 AT5G55550.10 27.309 249 141 7 166 395 7 234 2.17e-16 82.0
Msa0836500 AT5G55550.10 27.530 247 152 7 5 242 7 235 3.25e-16 81.6
Msa0836500 AT5G55550.8 27.309 249 141 7 166 395 7 234 2.37e-16 82.0
Msa0836500 AT5G55550.8 27.530 247 152 7 5 242 7 235 2.71e-16 81.6
Msa0836500 AT5G47620.4 26.295 251 150 6 166 415 7 223 2.51e-16 81.6
Msa0836500 AT5G47620.4 30.539 167 81 3 111 242 40 206 2.51e-15 78.6
Msa0836500 AT1G58470.2 31.098 164 86 2 111 247 40 203 2.02e-15 78.2
Msa0836500 AT1G58470.1 31.098 164 86 2 111 247 40 203 2.02e-15 78.2
Msa0836500 AT5G47620.3 36.449 107 65 2 310 415 37 141 7.45e-11 64.3

Find 152 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGCTTACTTCCATAAAT+TGG 0.100436 5_4:-9989768 None:intergenic
GACCATCCCGGCCCAATTTA+TGG 0.168688 5_4:+9989756 Msa0836500:CDS
TTGAGCGAGATCTTCAATTT+AGG 0.182891 5_4:+9986814 Msa0836500:five_prime_UTR
GAGGATCTCCGTCAATATTT+TGG 0.192414 5_4:+9989929 Msa0836500:CDS
AGAACAGGTCACAGGGGTTT+TGG 0.241128 5_4:+9990068 Msa0836500:CDS
AGATCCTCAGAATTTGCTTC+TGG 0.252248 5_4:-9989914 None:intergenic
ACTGGACGATCTCGTGGTTT+TGG 0.264082 5_4:+9988344 Msa0836500:CDS
AACAATAGTATGGAATCTTT+TGG 0.272282 5_4:+9990747 Msa0836500:CDS
CCTGCAGTGACGCAATTATT+TGG 0.284275 5_4:+9987691 Msa0836500:CDS
TGAATGATACCAGCGCGATT+TGG 0.288688 5_4:-9987747 None:intergenic
TCTTGATACTCTGCTCTTGA+TGG 0.300596 5_4:-9991090 None:intergenic
TACCTCCAATCTGCTCTTGA+TGG 0.311138 5_4:-9991198 None:intergenic
CAGATTATCAGGAGCATATT+GGG 0.312453 5_4:+9991172 Msa0836500:CDS
GCCATCGAGAGCAGATTATC+AGG 0.327728 5_4:+9991125 Msa0836500:CDS
GAATGATACCAGCGCGATTT+GGG 0.327934 5_4:-9987746 None:intergenic
GGTGGTCCGGTGCGAAGTTA+TGG 0.334546 5_4:+9990777 Msa0836500:CDS
CTTGTTAATTTCCCCTTCAT+AGG 0.336035 5_4:+9987097 Msa0836500:five_prime_UTR
AAAGAATATATGAGCAAATA+TGG 0.338240 5_4:+9987327 Msa0836500:CDS
GCCATCAAGAGCAGATTATC+AGG 0.340447 5_4:+9991161 Msa0836500:CDS
TGAGCGAGATCTTCAATTTA+GGG 0.352184 5_4:+9986815 Msa0836500:five_prime_UTR
TCAAAGATGCATCGTGGAAT+TGG 0.356848 5_4:+9989051 Msa0836500:CDS
GCAGATTATCAGGAGCATAT+TGG 0.357853 5_4:+9991171 Msa0836500:CDS
CCCCTGTGACCTGTTCTCTT+AGG 0.360493 5_4:-9990062 None:intergenic
TCCTGATAATCTGCTCTTGA+TGG 0.360661 5_4:-9991162 None:intergenic
CAGAGTATCAAGAGCAGCTT+GGG 0.374034 5_4:+9991100 Msa0836500:CDS
CATGCTTACTTCCATAAATT+GGG 0.374289 5_4:-9989767 None:intergenic
CAGCAGAACCTCCGAGTTCA+TGG 0.380347 5_4:-9989381 None:intergenic
CAGATTATCAGGAGCAGATT+GGG 0.384978 5_4:+9991136 Msa0836500:CDS
AAAGACAGAAACAAAGAAAC+AGG 0.386633 5_4:+9986739 Msa0836500:five_prime_UTR
CTATCGCTCCGCACCGTCTC+AGG 0.387812 5_4:-9986767 None:intergenic
CCCTGTGACATTCTGCCAGT+TGG 0.392171 5_4:-9989657 None:intergenic
GCGATAGAGGGAGGAGGAAG+AGG 0.408941 5_4:+9986783 Msa0836500:five_prime_UTR
TTGATTCAGGAGCGTTCAAC+TGG 0.410138 5_4:+9988326 Msa0836500:intron
TAGACAGTGTCATACTAGTA+TGG 0.412812 5_4:-9991225 None:intergenic
GTGTGAGAACGAGGTGGAAT+TGG 0.413378 5_4:+9987057 Msa0836500:five_prime_UTR
GTGGTCCGGTGCGAAGTTAT+GGG 0.426221 5_4:+9990778 Msa0836500:CDS
CGATAGAGGGAGGAGGAAGA+GGG 0.431789 5_4:+9986784 Msa0836500:five_prime_UTR
GATCCTCAGAATTTGCTTCT+GGG 0.437213 5_4:-9989913 None:intergenic
TTGTTAATTTCCCCTTCATA+GGG 0.438155 5_4:+9987098 Msa0836500:five_prime_UTR
CTAAGGCCTCATGAGATTTG+TGG 0.448058 5_4:+9990134 Msa0836500:CDS
GAGACGGTGCGGAGCGATAG+AGG 0.448606 5_4:+9986770 Msa0836500:five_prime_UTR
GTCAGAAAACACAGGTAGAT+TGG 0.455012 5_4:-9987859 None:intergenic
TGCTTTGTTCAAGTTGCAAA+TGG 0.455192 5_4:+9987131 Msa0836500:exon
TAGCAGATCGTGTCTCTCTA+AGG 0.457080 5_4:+9990117 Msa0836500:CDS
CTGGGCCTAGCATCGTCAAC+AGG 0.457459 5_4:-9990708 None:intergenic
GTTTCTTCTGTTACTGATGG+TGG 0.458285 5_4:-9988716 None:intergenic
TGTTACTGATGGTGGAATCC+TGG 0.459291 5_4:-9988708 None:intergenic
ATTTATTTCTAACAGGATCA+AGG 0.466443 5_4:+9989027 Msa0836500:intron
TGAGCTACAGGTCGCGCACT+TGG 0.467841 5_4:+9987778 Msa0836500:CDS
GCAGATTATCAGGAGCAGAT+TGG 0.471023 5_4:+9991135 Msa0836500:CDS
GCCAACTGGCAGAATGTCAC+AGG 0.472918 5_4:+9989656 Msa0836500:CDS
TTGTCAGGTGAACATGTTCT+TGG 0.474282 5_4:+9988491 Msa0836500:CDS
GTGTAGGATCCTAAGAGAAC+AGG 0.475893 5_4:+9990053 Msa0836500:intron
TTTATCACTTTCGCAAATGC+AGG 0.475953 5_4:+9989075 Msa0836500:CDS
GAAGCTATACAAACTTGCCT+TGG 0.476198 5_4:-9989425 None:intergenic
TACAGGTCGCGCACTTGGGA+AGG 0.479917 5_4:+9987783 Msa0836500:CDS
GAAGATGACGTTAAGCCAAC+TGG 0.484275 5_4:+9989642 Msa0836500:CDS
TGCTCTTGATGGCCTCACAC+TGG 0.484555 5_4:-9991079 None:intergenic
GTTCATCATAAAATTTCCGC+TGG 0.484629 5_4:-9990727 None:intergenic
AGAAGATTGCATTGTCATGA+AGG 0.486289 5_4:+9987356 Msa0836500:CDS
GCTCTTGATGGCCTCACACT+GGG 0.488596 5_4:-9991078 None:intergenic
GAGAGAGTGGTGTGAGAACG+AGG 0.489579 5_4:+9987048 Msa0836500:five_prime_UTR
AAAGTTTCTTCTGTTACTGA+TGG 0.496580 5_4:-9988719 None:intergenic
TTCACAGCCTTGTGAGCTAC+AGG 0.500022 5_4:+9987766 Msa0836500:CDS
AAGCTATACAAACTTGCCTT+GGG 0.503521 5_4:-9989424 None:intergenic
CTTACTTCCATAAATTGGGC+CGG 0.507805 5_4:-9989763 None:intergenic
CCAAATAATTGCGTCACTGC+AGG 0.507854 5_4:-9987691 None:intergenic
GGGAAATCCGAAAGAAAAGA+AGG 0.508586 5_4:+9987804 Msa0836500:CDS
CAAGAGCAGATTGGAGGTAC+AGG 0.513063 5_4:+9991202 Msa0836500:CDS
TTCCATAAATTGGGCCGGGA+TGG 0.514701 5_4:-9989758 None:intergenic
CGAAGTTATGGGAGGATGTA+CGG 0.515719 5_4:+9990789 Msa0836500:CDS
TCCTCAGAATTTGCTTCTGG+GGG 0.515936 5_4:-9989911 None:intergenic
AATTGGCACAGTCATGGTGC+GGG 0.517399 5_4:+9987661 Msa0836500:intron
TGGCTGCAGGAAGTATTGTC+AGG 0.517437 5_4:+9988476 Msa0836500:intron
GCAGAGTATCAAGAGCAGCT+TGG 0.522183 5_4:+9991099 Msa0836500:CDS
ATATGTTACATTTGCTTCAG+TGG 0.522316 5_4:+9988367 Msa0836500:CDS
GTCGGAAGGAAGGCAGCCAC+AGG 0.523300 5_4:-9987831 None:intergenic
ATCCTAAGAGAACAGGTCAC+AGG 0.523936 5_4:+9990060 Msa0836500:CDS
ACAGGTAGATTGGTCCTTGT+CGG 0.526426 5_4:-9987849 None:intergenic
ATCCTCAGAATTTGCTTCTG+GGG 0.527061 5_4:-9989912 None:intergenic
CATATATTCTTTCAACCCCT+CGG 0.529055 5_4:-9987316 None:intergenic
TTACTTCCATAAATTGGGCC+GGG 0.529497 5_4:-9989762 None:intergenic
CGTTCAACTGGACGATCTCG+TGG 0.530966 5_4:+9988338 Msa0836500:CDS
GGAGGCCATCAAGAGCAGAT+TGG 0.532787 5_4:+9991193 Msa0836500:CDS
TCCTAAGAGAACAGGTCACA+GGG 0.544537 5_4:+9990061 Msa0836500:CDS
TCCTGATAATCTGCTCTCGA+TGG 0.544958 5_4:-9991126 None:intergenic
CAAATCTTCCAAAATATTGA+CGG 0.547778 5_4:-9989937 None:intergenic
GTGAACATGTTCTTGGTGAT+AGG 0.551959 5_4:+9988498 Msa0836500:CDS
CCACACCTGTTGACGATGCT+AGG 0.555874 5_4:+9990703 Msa0836500:CDS
TAATTTGCGAAATTCGAGAA+TGG 0.555966 5_4:+9989464 Msa0836500:CDS
AGCAGAACCTCCGAGTTCAT+GGG 0.558652 5_4:-9989380 None:intergenic
CCTTGGGACGTTGATACCGA+GGG 0.562559 5_4:+9987300 Msa0836500:CDS
TCCTTGGGACGTTGATACCG+AGG 0.565062 5_4:+9987299 Msa0836500:CDS
GAGCTACAGGTCGCGCACTT+GGG 0.570253 5_4:+9987779 Msa0836500:CDS
AGTATCAAGAGCAGCTTGGG+AGG 0.570420 5_4:+9991103 Msa0836500:CDS
ATTGGTCCTTGTCGGAAGGA+AGG 0.571226 5_4:-9987841 None:intergenic
TGCTTCAGTGGATGACGCCA+AGG 0.572403 5_4:+9988379 Msa0836500:CDS
CCGGGATGGTCATACAAAGT+AGG 0.572756 5_4:-9989744 None:intergenic
ACAGGTCGCGCACTTGGGAA+GGG 0.573440 5_4:+9987784 Msa0836500:CDS
CCTAGCATCGTCAACAGGTG+TGG 0.574276 5_4:-9990703 None:intergenic
GTTCTCTGTTGCAGAGTCTG+TGG 0.578730 5_4:+9989339 Msa0836500:intron
ATGTCAGAAACCCATGAACT+CGG 0.579138 5_4:+9989370 Msa0836500:CDS
TGCGGAGCGATAGAGGGAGG+AGG 0.579799 5_4:+9986777 Msa0836500:five_prime_UTR
GGCCATCAAGAGCAGATTGG+AGG 0.581090 5_4:+9991196 Msa0836500:CDS
GTCGTTGCCCCAAATCGCGC+TGG 0.582046 5_4:+9987738 Msa0836500:CDS
CAATTGGCACAGTCATGGTG+CGG 0.582346 5_4:+9987660 Msa0836500:intron
GTGGCCAGAAAACAAACAGC+TGG 0.582547 5_4:-9987881 None:intergenic
GCAACTAGATATGCAGCTCT+CGG 0.584684 5_4:+9989717 Msa0836500:CDS
CGGTGCGGAGCGATAGAGGG+AGG 0.587688 5_4:+9986774 Msa0836500:five_prime_UTR
TGTTCTTGGTGATAGGATGC+TGG 0.592674 5_4:+9988505 Msa0836500:CDS
TGGCTGCCTTCCTTCCGACA+AGG 0.593015 5_4:+9987835 Msa0836500:CDS
GTTACGGAGTTCCCAGTGTG+AGG 0.595404 5_4:+9991067 Msa0836500:CDS
ACTCGGAGGTTCTGCTGTGG+TGG 0.596322 5_4:+9989387 Msa0836500:CDS
TGCGCGACCTGTAGCTCACA+AGG 0.598857 5_4:-9987773 None:intergenic
CCCTCGGTATCAACGTCCCA+AGG 0.604646 5_4:-9987300 None:intergenic
TTCATCATAAAATTTCCGCT+GGG 0.604967 5_4:-9990726 None:intergenic
AGACGGTGCGGAGCGATAGA+GGG 0.607784 5_4:+9986771 Msa0836500:five_prime_UTR
ATCCTCCCATAACTTCGCAC+CGG 0.611262 5_4:-9990783 None:intergenic
GTAGATTGGTCCTTGTCGGA+AGG 0.615107 5_4:-9987845 None:intergenic
GACAGAAACAAAGAAACAGG+AGG 0.621319 5_4:+9986742 Msa0836500:five_prime_UTR
GAAACAGGAGGAACCTGAGA+CGG 0.624547 5_4:+9986754 Msa0836500:five_prime_UTR
CCAACTGGCAGAATGTCACA+GGG 0.624939 5_4:+9989657 Msa0836500:CDS
AACAGATTTGTACATGCCAA+AGG 0.628424 5_4:+9988914 Msa0836500:CDS
GGCACAGTCATGGTGCGGGG+TGG 0.632391 5_4:+9987665 Msa0836500:intron
AACTGGCAGAATGTCACAGG+GGG 0.633257 5_4:+9989659 Msa0836500:CDS
TAGGATGCTGGAAGTCAAAG+TGG 0.638327 5_4:+9988517 Msa0836500:CDS
TCGTGTCCACAAATCTCATG+AGG 0.638940 5_4:-9990140 None:intergenic
AGTCAAAGTGGCTACACCGA+AGG 0.639479 5_4:+9988529 Msa0836500:CDS
ATTATCAGGAGCAGATTGGG+AGG 0.645499 5_4:+9991139 Msa0836500:CDS
AATGATACCAGCGCGATTTG+GGG 0.662366 5_4:-9987745 None:intergenic
AGAGTGGTGTGAGAACGAGG+TGG 0.663600 5_4:+9987051 Msa0836500:five_prime_UTR
GTCCGGTGCGAAGTTATGGG+AGG 0.664724 5_4:+9990781 Msa0836500:CDS
AATGGAGCAGAGAAAGCTTG+TGG 0.669020 5_4:+9987149 Msa0836500:exon
TGAACTCGGAGGTTCTGCTG+TGG 0.671631 5_4:+9989384 Msa0836500:CDS
AGGAGGAACCTGAGACGGTG+CGG 0.673461 5_4:+9986759 Msa0836500:five_prime_UTR
ATTGGCACAGTCATGGTGCG+GGG 0.674174 5_4:+9987662 Msa0836500:intron
CCTACTTTGTATGACCATCC+CGG 0.674918 5_4:+9989744 Msa0836500:CDS
TCATGAGATTTGTGGACACG+AGG 0.678619 5_4:+9990142 Msa0836500:CDS
CCTCAGAATTTGCTTCTGGG+GGG 0.679553 5_4:-9989910 None:intergenic
GGTTGATCGAGCTACACCCA+AGG 0.679610 5_4:+9989408 Msa0836500:CDS
CTTGGGACGTTGATACCGAG+GGG 0.682216 5_4:+9987301 Msa0836500:CDS
AAGAAAAGAAGGAAAACCTG+TGG 0.701206 5_4:+9987815 Msa0836500:CDS
GTTGACGATGCTAGGCCCAG+CGG 0.703212 5_4:+9990711 Msa0836500:CDS
GAATGTAAACATCTTCTATG+CGG 0.707080 5_4:-9989961 None:intergenic
CAAGGCTCAAAGATGCATCG+TGG 0.707955 5_4:+9989045 Msa0836500:CDS
AACAGCTGGTCAGAAAACAC+AGG 0.710978 5_4:-9987867 None:intergenic
ACTGGCAGAATGTCACAGGG+GGG 0.713375 5_4:+9989660 Msa0836500:CDS
ATTATCAGGAGCATATTGGG+AGG 0.722298 5_4:+9991175 Msa0836500:CDS
CCTAAGAGAACAGGTCACAG+GGG 0.726380 5_4:+9990062 Msa0836500:CDS
TCAGAAACCCATGAACTCGG+AGG 0.747096 5_4:+9989373 Msa0836500:CDS
CAACTGGCAGAATGTCACAG+GGG 0.762401 5_4:+9989658 Msa0836500:CDS
AGTTATGGGAGGATGTACGG+TGG 0.763025 5_4:+9990792 Msa0836500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAACACAAAATT+GGG - chr5_4:9987395-9987414 None:intergenic 10.0%
!! AATAAAAAAAAACACAAAAT+TGG - chr5_4:9987396-9987415 None:intergenic 10.0%
!!! TATTTTTCTGTATTATAATT+TGG + chr5_4:9989602-9989621 Msa0836500:intron 10.0%
!! CTTAAAAAATTCAAATATTT+AGG + chr5_4:9990205-9990224 Msa0836500:intron 10.0%
!!! TAAAATGTTTTTGTTTTTAA+TGG - chr5_4:9990493-9990512 None:intergenic 10.0%
!! TTTGTTTATGTTTATTCATT+TGG + chr5_4:9987190-9987209 Msa0836500:intron 15.0%
!! TTGTTTATGTTTATTCATTT+GGG + chr5_4:9987191-9987210 Msa0836500:intron 15.0%
!! AATTTCAAATAAATATGCAT+GGG - chr5_4:9988153-9988172 None:intergenic 15.0%
!! AAATTTCAAATAAATATGCA+TGG - chr5_4:9988154-9988173 None:intergenic 15.0%
!! AGAAAAGGAAAAAAAAAAAA+AGG - chr5_4:9988859-9988878 None:intergenic 15.0%
!!! ATTTTTCATTTATTTCTAAC+AGG + chr5_4:9989020-9989039 Msa0836500:intron 15.0%
!!! GTCTACATATTTTAAATATA+TGG + chr5_4:9989149-9989168 Msa0836500:intron 15.0%
!! ATAAAATAAAATTATACCAG+CGG + chr5_4:9989518-9989537 Msa0836500:intron 15.0%
!!! ATTAGTAAAAAGATTTTTGT+TGG + chr5_4:9989881-9989900 Msa0836500:CDS 15.0%
!! TGTTTATGAAATTGGATATT+AGG + chr5_4:9987266-9987285 Msa0836500:intron 20.0%
!! AAAGAATATATGAGCAAATA+TGG + chr5_4:9987327-9987346 Msa0836500:CDS 20.0%
!!! CACATTTGTTATTATTAACA+AGG - chr5_4:9987452-9987471 None:intergenic 20.0%
!! TTAAGTTAGTAATTGAATGA+CGG - chr5_4:9987500-9987519 None:intergenic 20.0%
!! AAATGTAAATGTCATATACA+AGG + chr5_4:9988260-9988279 Msa0836500:intron 20.0%
!!! TAATCTACTTATTTTGATTC+AGG + chr5_4:9988313-9988332 Msa0836500:intron 20.0%
!!! ACAAATATTTTTGTAACCTT+CGG - chr5_4:9988548-9988567 None:intergenic 20.0%
!!! AAAAATTCTGGTAACTTTTT+TGG - chr5_4:9988684-9988703 None:intergenic 20.0%
!! TAAATATATGGTAGTTTCAT+AGG + chr5_4:9989161-9989180 Msa0836500:intron 20.0%
!! AAATTAAACCAAAACTAGAA+TGG - chr5_4:9989255-9989274 None:intergenic 20.0%
!!! TCTAGTTTTGGTTTAATTTT+TGG + chr5_4:9989256-9989275 Msa0836500:intron 20.0%
!! TAAAATAAAATTATACCAGC+GGG + chr5_4:9989519-9989538 Msa0836500:intron 20.0%
!!! TTTTATTCATATCTTACTCT+GGG - chr5_4:9989986-9990005 None:intergenic 20.0%
!!! TTTTTATTCATATCTTACTC+TGG - chr5_4:9989987-9990006 None:intergenic 20.0%
!!! TTTTATGATGAACAATAGTA+TGG + chr5_4:9990737-9990756 Msa0836500:CDS 20.0%
!! TTTGAATTTCGTTTTCATCA+AGG + chr5_4:9986839-9986858 Msa0836500:five_prime_UTR 25.0%
! GCGAAAAAATTGAAAGAATT+TGG - chr5_4:9986885-9986904 None:intergenic 25.0%
!!! AAATCAAAATTCTGCTTTTG+GGG - chr5_4:9986940-9986959 None:intergenic 25.0%
!!! CAAATCAAAATTCTGCTTTT+GGG - chr5_4:9986941-9986960 None:intergenic 25.0%
! ACAATAAAAATCCCTATGAA+GGG - chr5_4:9987112-9987131 None:intergenic 25.0%
! TTGATCTGTGTTTATGAAAT+TGG + chr5_4:9987258-9987277 Msa0836500:intron 25.0%
!! TGAAATTGGATATTAGGTTT+TGG + chr5_4:9987272-9987291 Msa0836500:intron 25.0%
!! GAAATTGGATATTAGGTTTT+GGG + chr5_4:9987273-9987292 Msa0836500:intron 25.0%
!! AAATTGGATATTAGGTTTTG+GGG + chr5_4:9987274-9987293 Msa0836500:intron 25.0%
!!! TCCAGCTTGTTTATTTTAAA+AGG + chr5_4:9987912-9987931 Msa0836500:intron 25.0%
!!! CCAGCTTGTTTATTTTAAAA+GGG + chr5_4:9987913-9987932 Msa0836500:intron 25.0%
!!! TTTATTTTAAAAGGGCAACA+TGG + chr5_4:9987921-9987940 Msa0836500:intron 25.0%
!!! ATGCATTTTGTTTTAGGTTA+AGG + chr5_4:9987947-9987966 Msa0836500:intron 25.0%
! TAGATAGAACTATTATGTCA+AGG + chr5_4:9988096-9988115 Msa0836500:intron 25.0%
! AAATAAATATGCATGGGAAA+TGG - chr5_4:9988147-9988166 None:intergenic 25.0%
!!! CAAATTTGTTTTATCACTTC+CGG + chr5_4:9988227-9988246 Msa0836500:intron 25.0%
! TTTACATTTCATATTCAGTC+CGG - chr5_4:9988249-9988268 None:intergenic 25.0%
! AGTATTACAATTATAGCACA+TGG - chr5_4:9988616-9988635 None:intergenic 25.0%
!! CTTGTGATGTTACATTTTAA+AGG + chr5_4:9988640-9988659 Msa0836500:intron 25.0%
!! AAAAGTTACCAGAATTTTTG+TGG + chr5_4:9988685-9988704 Msa0836500:CDS 25.0%
!! TAACAGAAGAAACTTTTAGA+AGG + chr5_4:9988726-9988745 Msa0836500:CDS 25.0%
!! TTTAGAAGGTATATAAGTGT+TGG + chr5_4:9988740-9988759 Msa0836500:intron 25.0%
! ATGACTGCAATAAAAAGAAA+AGG - chr5_4:9988874-9988893 None:intergenic 25.0%
!!! ATTTATTTCTAACAGGATCA+AGG + chr5_4:9989027-9989046 Msa0836500:intron 25.0%
!! TTGTATAGCTTCTCATTTTA+TGG + chr5_4:9989436-9989455 Msa0836500:CDS 25.0%
! AAAATAAAATTATACCAGCG+GGG + chr5_4:9989520-9989539 Msa0836500:intron 25.0%
! ACAAATATCCTTCAATAGTT+AGG - chr5_4:9989576-9989595 None:intergenic 25.0%
!!! TAGTCATTTTAATTGAACAG+AGG - chr5_4:9989803-9989822 None:intergenic 25.0%
! CAAATCTTCCAAAATATTGA+CGG - chr5_4:9989940-9989959 None:intergenic 25.0%
!!! CAAATATTTAGGTGTTTTGA+TGG + chr5_4:9990216-9990235 Msa0836500:intron 25.0%
! AATAACAACACACTTAAATC+AGG - chr5_4:9990306-9990325 None:intergenic 25.0%
!! TGATTTAAGTGTGTTGTTAT+TGG + chr5_4:9990305-9990324 Msa0836500:intron 25.0%
!! AACAATAGTATGGAATCTTT+TGG + chr5_4:9990747-9990766 Msa0836500:CDS 25.0%
!! ACAATAGTATGGAATCTTTT+GGG + chr5_4:9990748-9990767 Msa0836500:CDS 25.0%
!! GGGATAATTTGTCAAAAATT+TGG + chr5_4:9990845-9990864 Msa0836500:intron 25.0%
! AGAACCAAGAAACTATTAAA+TGG - chr5_4:9990897-9990916 None:intergenic 25.0%
!!! ATCAATGTTTTTATGACTGA+TGG - chr5_4:9990966-9990985 None:intergenic 25.0%
!! AAAAACATTGATAATCTGCA+TGG + chr5_4:9990974-9990993 Msa0836500:intron 25.0%
! AAAACAGTGTGTAAACAAAA+AGG - chr5_4:9991034-9991053 None:intergenic 25.0%
AAAGACAGAAACAAAGAAAC+AGG + chr5_4:9986739-9986758 Msa0836500:five_prime_UTR 30.0%
! CCAAATCAAAATTCTGCTTT+TGG - chr5_4:9986942-9986961 None:intergenic 30.0%
!!! CCAAAAGCAGAATTTTGATT+TGG + chr5_4:9986939-9986958 Msa0836500:intron 30.0%
TTGTTAATTTCCCCTTCATA+GGG + chr5_4:9987098-9987117 Msa0836500:five_prime_UTR 30.0%
CAATAAAAATCCCTATGAAG+GGG - chr5_4:9987111-9987130 None:intergenic 30.0%
CACAATAAAAATCCCTATGA+AGG - chr5_4:9987113-9987132 None:intergenic 30.0%
GAGTAATATTCGAATCTGTT+TGG + chr5_4:9987575-9987594 Msa0836500:intron 30.0%
! GAGACAGTAATAATCCATTT+TGG + chr5_4:9987597-9987616 Msa0836500:intron 30.0%
CATGATTAATAGCATAGCTT+TGG - chr5_4:9987627-9987646 None:intergenic 30.0%
! AGGTTTTCCTTCTTTTCTTT+CGG - chr5_4:9987814-9987833 None:intergenic 30.0%
!!! CCCTTTTAAAATAAACAAGC+TGG - chr5_4:9987916-9987935 None:intergenic 30.0%
AACCCAAAACAATTATCACT+CGG - chr5_4:9987978-9987997 None:intergenic 30.0%
!!! GTGATAATTGTTTTGGGTTA+TGG + chr5_4:9987979-9987998 Msa0836500:intron 30.0%
AAGTTAGATTTCCCTATACT+AGG + chr5_4:9988285-9988304 Msa0836500:intron 30.0%
AGATTAGAATGCCTAGTATA+GGG - chr5_4:9988299-9988318 None:intergenic 30.0%
TAGATTAGAATGCCTAGTAT+AGG - chr5_4:9988300-9988319 None:intergenic 30.0%
ATATGTTACATTTGCTTCAG+TGG + chr5_4:9988367-9988386 Msa0836500:CDS 30.0%
!! GTGATGTTACATTTTAAAGG+AGG + chr5_4:9988643-9988662 Msa0836500:intron 30.0%
AAAGTTTCTTCTGTTACTGA+TGG - chr5_4:9988722-9988741 None:intergenic 30.0%
!! TGCAGTCATTTTGAGAAATA+TGG + chr5_4:9988885-9988904 Msa0836500:intron 30.0%
CATACATAAGCAACAGTAAA+TGG - chr5_4:9989106-9989125 None:intergenic 30.0%
ACATATCATCAATTGCTCTA+AGG + chr5_4:9989311-9989330 Msa0836500:intron 30.0%
! TAATTTGCGAAATTCGAGAA+TGG + chr5_4:9989464-9989483 Msa0836500:CDS 30.0%
GAAAATGTCTTCATTACACA+TGG - chr5_4:9989494-9989513 None:intergenic 30.0%
! GTCTAAACAATGAAAGCATA+TGG - chr5_4:9989554-9989573 None:intergenic 30.0%
TGTTTAGACCTAACTATTGA+AGG + chr5_4:9989565-9989584 Msa0836500:intron 30.0%
!! TTTGGCTGTACCATTTTTAT+AGG + chr5_4:9989620-9989639 Msa0836500:intron 30.0%
ACGTCATCTTCCTATAAAAA+TGG - chr5_4:9989633-9989652 None:intergenic 30.0%
CATGCTTACTTCCATAAATT+GGG - chr5_4:9989770-9989789 None:intergenic 30.0%
ACGATCTCACTTTGTAAATT+AGG + chr5_4:9989839-9989858 Msa0836500:intron 30.0%
CGATCTCACTTTGTAAATTA+GGG + chr5_4:9989840-9989859 Msa0836500:intron 30.0%
GATCTCACTTTGTAAATTAG+GGG + chr5_4:9989841-9989860 Msa0836500:intron 30.0%
ATCTCACTTTGTAAATTAGG+GGG + chr5_4:9989842-9989861 Msa0836500:intron 30.0%
!! CGTCAATATTTTGGAAGATT+TGG + chr5_4:9989938-9989957 Msa0836500:CDS 30.0%
GAATGTAAACATCTTCTATG+CGG - chr5_4:9989964-9989983 None:intergenic 30.0%
!! AGTTAATCAGCTTTAAACAC+TGG - chr5_4:9990018-9990037 None:intergenic 30.0%
!!! ATTTGTTACTTTTGCTGATG+AGG + chr5_4:9990091-9990110 Msa0836500:CDS 30.0%
!!! TTTGTTACTTTTGCTGATGA+GGG + chr5_4:9990092-9990111 Msa0836500:CDS 30.0%
!!! ATTTAGGTGTTTTGATGGAA+TGG + chr5_4:9990221-9990240 Msa0836500:intron 30.0%
GGAATTTGCCATTAAAAGTT+TGG + chr5_4:9990373-9990392 Msa0836500:intron 30.0%
! CTAGGAATCCAAACTTTTAA+TGG - chr5_4:9990384-9990403 None:intergenic 30.0%
TACTGTTGATGCAATAAACT+AGG - chr5_4:9990402-9990421 None:intergenic 30.0%
TTTATTGCATCAACAGTAGT+TGG + chr5_4:9990404-9990423 Msa0836500:intron 30.0%
!!! ATTAGTTTTCTCCTTTGTCA+GGG - chr5_4:9990446-9990465 None:intergenic 30.0%
TTAATAAACTTGTGCAACCT+TGG + chr5_4:9990564-9990583 Msa0836500:intron 30.0%
TAATAAACTTGTGCAACCTT+GGG + chr5_4:9990565-9990584 Msa0836500:intron 30.0%
TTCATCATAAAATTTCCGCT+GGG - chr5_4:9990729-9990748 None:intergenic 30.0%
! CAATAGTATGGAATCTTTTG+GGG + chr5_4:9990749-9990768 Msa0836500:CDS 30.0%
! AATAGTATGGAATCTTTTGG+GGG + chr5_4:9990750-9990769 Msa0836500:CDS 30.0%
AAATTCCAAAGATATTGAGG+TGG - chr5_4:9990871-9990890 None:intergenic 30.0%
CCTAAATTCCAAAGATATTG+AGG - chr5_4:9990874-9990893 None:intergenic 30.0%
!! CCTCAATATCTTTGGAATTT+AGG + chr5_4:9990871-9990890 Msa0836500:intron 30.0%
TAGGCCATTTAATAGTTTCT+TGG + chr5_4:9990890-9990909 Msa0836500:intron 30.0%
TTGAGCGAGATCTTCAATTT+AGG + chr5_4:9986814-9986833 Msa0836500:five_prime_UTR 35.0%
TGAGCGAGATCTTCAATTTA+GGG + chr5_4:9986815-9986834 Msa0836500:five_prime_UTR 35.0%
!! AAAATTCTGCTTTTGGGGAT+TGG - chr5_4:9986935-9986954 None:intergenic 35.0%
!! TGTGAGAATTTTAGAGAGAG+TGG + chr5_4:9987035-9987054 Msa0836500:five_prime_UTR 35.0%
CTTGTTAATTTCCCCTTCAT+AGG + chr5_4:9987097-9987116 Msa0836500:five_prime_UTR 35.0%
!! TGCTTTGTTCAAGTTGCAAA+TGG + chr5_4:9987131-9987150 Msa0836500:exon 35.0%
CATATATTCTTTCAACCCCT+CGG - chr5_4:9987319-9987338 None:intergenic 35.0%
AGAAGATTGCATTGTCATGA+AGG + chr5_4:9987356-9987375 Msa0836500:CDS 35.0%
AGAACACACCCTTGAATAAT+GGG - chr5_4:9987539-9987558 None:intergenic 35.0%
AAGAACACACCCTTGAATAA+TGG - chr5_4:9987540-9987559 None:intergenic 35.0%
!! ATAGCTTTGGAAGACCAAAA+TGG - chr5_4:9987614-9987633 None:intergenic 35.0%
!!! ATTTGGTGCTTGCATTTTGT+AGG + chr5_4:9987708-9987727 Msa0836500:CDS 35.0%
!!! TTTGGTGCTTGCATTTTGTA+GGG + chr5_4:9987709-9987728 Msa0836500:CDS 35.0%
AAGAAAAGAAGGAAAACCTG+TGG + chr5_4:9987815-9987834 Msa0836500:CDS 35.0%
!! ATTTTAAAAGGGCAACATGG+TGG + chr5_4:9987924-9987943 Msa0836500:intron 35.0%
!!! TGGTGGATGCATTTTGTTTT+AGG + chr5_4:9987941-9987960 Msa0836500:intron 35.0%
! TGCCGAGTGATAATTGTTTT+GGG + chr5_4:9987973-9987992 Msa0836500:intron 35.0%
AGTCAACAAGTATCACTTAG+TGG - chr5_4:9988007-9988026 None:intergenic 35.0%
AAAAGTGACATGCTTAGACT+AGG + chr5_4:9988181-9988200 Msa0836500:intron 35.0%
TATCTAGGTGAAAGTTACCT+TGG - chr5_4:9988399-9988418 None:intergenic 35.0%
TCTACATGTATATCACGAGT+TGG + chr5_4:9988445-9988464 Msa0836500:intron 35.0%
CTGAAACTTGAAATCTAGTC+TGG + chr5_4:9988568-9988587 Msa0836500:intron 35.0%
!! ACATTTTAAAGGAGGAGATG+AGG + chr5_4:9988651-9988670 Msa0836500:intron 35.0%
!! CATTTTAAAGGAGGAGATGA+GGG + chr5_4:9988652-9988671 Msa0836500:intron 35.0%
!!! ATTCTGGTAACTTTTTTGGC+TGG - chr5_4:9988680-9988699 None:intergenic 35.0%
AACAGATTTGTACATGCCAA+AGG + chr5_4:9988914-9988933 Msa0836500:CDS 35.0%
TTTATCACTTTCGCAAATGC+AGG + chr5_4:9989075-9989094 Msa0836500:CDS 35.0%
! CATAGGATCTTGTTATCACT+TGG + chr5_4:9989178-9989197 Msa0836500:intron 35.0%
AAACCAAAACTAGAATGGCA+CGG - chr5_4:9989250-9989269 None:intergenic 35.0%
!!! CTTAGACTTTTGAAGTGAAG+TGG + chr5_4:9989281-9989300 Msa0836500:intron 35.0%
AAGCTATACAAACTTGCCTT+GGG - chr5_4:9989427-9989446 None:intergenic 35.0%
CCATGCTTACTTCCATAAAT+TGG - chr5_4:9989771-9989790 None:intergenic 35.0%
CCAATTTATGGAAGTAAGCA+TGG + chr5_4:9989768-9989787 Msa0836500:intron 35.0%
! TTTTTACTAATTCTCCGACG+AGG - chr5_4:9989872-9989891 None:intergenic 35.0%
GATCCTACACATAAAAAGAC+GGG - chr5_4:9990043-9990062 None:intergenic 35.0%
GGATCCTACACATAAAAAGA+CGG - chr5_4:9990044-9990063 None:intergenic 35.0%
!! GAATGGACATTTTGAAGAAG+GGG - chr5_4:9990284-9990303 None:intergenic 35.0%
!! GGAATGGACATTTTGAAGAA+GGG - chr5_4:9990285-9990304 None:intergenic 35.0%
!! AGGAATGGACATTTTGAAGA+AGG - chr5_4:9990286-9990305 None:intergenic 35.0%
CAACACACTTAAATCAGGAA+TGG - chr5_4:9990301-9990320 None:intergenic 35.0%
!! CTCAGATTTTAGTAACCAGT+TGG + chr5_4:9990334-9990353 Msa0836500:intron 35.0%
!!! GATTAGTTTTCTCCTTTGTC+AGG - chr5_4:9990447-9990466 None:intergenic 35.0%
TGGCAAATGATAGTAGTTAG+TGG - chr5_4:9990473-9990492 None:intergenic 35.0%
TTTACATGCATATGTACCCA+AGG - chr5_4:9990584-9990603 None:intergenic 35.0%
AGTTCAAAGCTTATAGCAAC+AGG - chr5_4:9990609-9990628 None:intergenic 35.0%
TGTGCGTTATTGTTCTAGTA+TGG + chr5_4:9990635-9990654 Msa0836500:intron 35.0%
TCTAGTATGGTTTGATTGAC+TGG + chr5_4:9990648-9990667 Msa0836500:intron 35.0%
GTTCATCATAAAATTTCCGC+TGG - chr5_4:9990730-9990749 None:intergenic 35.0%
! TGATGATGTGAGTATATGCA+AGG + chr5_4:9990824-9990843 Msa0836500:intron 35.0%
GATGATGTGAGTATATGCAA+GGG + chr5_4:9990825-9990844 Msa0836500:intron 35.0%
! ACACTGTTTTCTTTTGCAGT+GGG + chr5_4:9991044-9991063 Msa0836500:intron 35.0%
! CAGATTATCAGGAGCATATT+GGG + chr5_4:9991172-9991191 Msa0836500:CDS 35.0%
GACAGAAACAAAGAAACAGG+AGG + chr5_4:9986742-9986761 Msa0836500:five_prime_UTR 40.0%
!! AAAGTGTGCTTGTTATGTGC+AGG + chr5_4:9987005-9987024 Msa0836500:intron 40.0%
!! AAGTGTGCTTGTTATGTGCA+GGG + chr5_4:9987006-9987025 Msa0836500:intron 40.0%
!!! ATTAGGTTTTGGGGATTCCT+TGG + chr5_4:9987283-9987302 Msa0836500:intron 40.0%
!!! TTAGGTTTTGGGGATTCCTT+GGG + chr5_4:9987284-9987303 Msa0836500:intron 40.0%
CATGTGTGCCCATTATTCAA+GGG + chr5_4:9987528-9987547 Msa0836500:intron 40.0%
ATGCTGCTATTGTGCACAAT+TGG + chr5_4:9987644-9987663 Msa0836500:intron 40.0%
!! TTGGTGCTTGCATTTTGTAG+GGG + chr5_4:9987710-9987729 Msa0836500:CDS 40.0%
GGGAAATCCGAAAGAAAAGA+AGG + chr5_4:9987804-9987823 Msa0836500:CDS 40.0%
GTCAGAAAACACAGGTAGAT+TGG - chr5_4:9987862-9987881 None:intergenic 40.0%
AAATAAACAAGCTGGAGTCC+TGG - chr5_4:9987908-9987927 None:intergenic 40.0%
! CTGCCGAGTGATAATTGTTT+TGG + chr5_4:9987972-9987991 Msa0836500:intron 40.0%
TTGTCAGGTGAACATGTTCT+TGG + chr5_4:9988491-9988510 Msa0836500:CDS 40.0%
! GTGAACATGTTCTTGGTGAT+AGG + chr5_4:9988498-9988517 Msa0836500:CDS 40.0%
! TTACCAGAATTTTTGTGGCC+AGG + chr5_4:9988690-9988709 Msa0836500:CDS 40.0%
AATCCTGGCCACAAAAATTC+TGG - chr5_4:9988696-9988715 None:intergenic 40.0%
GTTTCTTCTGTTACTGATGG+TGG - chr5_4:9988719-9988738 None:intergenic 40.0%
TCAAAGATGCATCGTGGAAT+TGG + chr5_4:9989051-9989070 Msa0836500:CDS 40.0%
! CTTGTTATCACTTGGAGAAG+AGG + chr5_4:9989186-9989205 Msa0836500:intron 40.0%
!!! TATCCGTGCCATTCTAGTTT+TGG + chr5_4:9989244-9989263 Msa0836500:intron 40.0%
ATGTCAGAAACCCATGAACT+CGG + chr5_4:9989370-9989389 Msa0836500:CDS 40.0%
GAAGCTATACAAACTTGCCT+TGG - chr5_4:9989428-9989447 None:intergenic 40.0%
TTACTTCCATAAATTGGGCC+GGG - chr5_4:9989765-9989784 None:intergenic 40.0%
CTTACTTCCATAAATTGGGC+CGG - chr5_4:9989766-9989785 None:intergenic 40.0%
! ATCCTCAGAATTTGCTTCTG+GGG - chr5_4:9989915-9989934 None:intergenic 40.0%
! GATCCTCAGAATTTGCTTCT+GGG - chr5_4:9989916-9989935 None:intergenic 40.0%
! AGATCCTCAGAATTTGCTTC+TGG - chr5_4:9989917-9989936 None:intergenic 40.0%
! GAGGATCTCCGTCAATATTT+TGG + chr5_4:9989929-9989948 Msa0836500:CDS 40.0%
! TCACCCGTCTTTTTATGTGT+AGG + chr5_4:9990037-9990056 Msa0836500:intron 40.0%
!!! GGACACGAGGTGTTTTATTT+TGG + chr5_4:9990155-9990174 Msa0836500:intron 40.0%
!!! AGGTGTTTTGATGGAATGGA+AGG + chr5_4:9990225-9990244 Msa0836500:intron 40.0%
TGGAATGGAAGGAAATCTGT+AGG + chr5_4:9990236-9990255 Msa0836500:intron 40.0%
GGAATGGAAGGAAATCTGTA+GGG + chr5_4:9990237-9990256 Msa0836500:intron 40.0%
AATGGCAAATTCCCTTCTAG+TGG - chr5_4:9990366-9990385 None:intergenic 40.0%
ATTGCATCAACAGTAGTTGG+AGG + chr5_4:9990407-9990426 Msa0836500:intron 40.0%
!! ATGGAATCTTTTGGGGGATA+TGG + chr5_4:9990756-9990775 Msa0836500:CDS 40.0%
TTTGGCCACCTCAATATCTT+TGG + chr5_4:9990863-9990882 Msa0836500:intron 40.0%
CAGATACTGCAGTTGTACTA+TGG - chr5_4:9990922-9990941 None:intergenic 40.0%
TAAAAATGTGTCCACATGCC+AGG - chr5_4:9991010-9991029 None:intergenic 40.0%
! CACACTGTTTTCTTTTGCAG+TGG + chr5_4:9991043-9991062 Msa0836500:intron 40.0%
! CACTGTTTTCTTTTGCAGTG+GGG + chr5_4:9991045-9991064 Msa0836500:intron 40.0%
! TTTCTTTTGCAGTGGGGTTA+CGG + chr5_4:9991051-9991070 Msa0836500:intron 40.0%
TCTTGATACTCTGCTCTTGA+TGG - chr5_4:9991093-9991112 None:intergenic 40.0%
CAGATTATCAGGAGCAGATT+GGG + chr5_4:9991136-9991155 Msa0836500:CDS 40.0%
TCCTGATAATCTGCTCTTGA+TGG - chr5_4:9991165-9991184 None:intergenic 40.0%
! GCAGATTATCAGGAGCATAT+TGG + chr5_4:9991171-9991190 Msa0836500:CDS 40.0%
! ATTATCAGGAGCATATTGGG+AGG + chr5_4:9991175-9991194 Msa0836500:CDS 40.0%
AATGGAGCAGAGAAAGCTTG+TGG + chr5_4:9987149-9987168 Msa0836500:exon 45.0%
GCATGTGTGCCCATTATTCA+AGG + chr5_4:9987527-9987546 Msa0836500:intron 45.0%
CCAAATAATTGCGTCACTGC+AGG - chr5_4:9987694-9987713 None:intergenic 45.0%
CCTGCAGTGACGCAATTATT+TGG + chr5_4:9987691-9987710 Msa0836500:CDS 45.0%
AATGATACCAGCGCGATTTG+GGG - chr5_4:9987748-9987767 None:intergenic 45.0%
GAATGATACCAGCGCGATTT+GGG - chr5_4:9987749-9987768 None:intergenic 45.0%
TGAATGATACCAGCGCGATT+TGG - chr5_4:9987750-9987769 None:intergenic 45.0%
! ACAGGTAGATTGGTCCTTGT+CGG - chr5_4:9987852-9987871 None:intergenic 45.0%
AACAGCTGGTCAGAAAACAC+AGG - chr5_4:9987870-9987889 None:intergenic 45.0%
!! CTGACCAGCTGTTTGTTTTC+TGG + chr5_4:9987877-9987896 Msa0836500:intron 45.0%
CTCTACCCTCTTCTATCACT+TGG + chr5_4:9988033-9988052 Msa0836500:intron 45.0%
CCAAGCCAAGTGATAGAAGA+GGG - chr5_4:9988041-9988060 None:intergenic 45.0%
!! TTCTATCACTTGGCTTGGCA+TGG + chr5_4:9988043-9988062 Msa0836500:intron 45.0%
!! TCTATCACTTGGCTTGGCAT+GGG + chr5_4:9988044-9988063 Msa0836500:intron 45.0%
!! TTGATTCAGGAGCGTTCAAC+TGG + chr5_4:9988326-9988345 Msa0836500:intron 45.0%
CCAGCAAAATGCGTGTATCT+AGG - chr5_4:9988414-9988433 None:intergenic 45.0%
! CCTAGATACACGCATTTTGC+TGG + chr5_4:9988411-9988430 Msa0836500:intron 45.0%
! TGTTCTTGGTGATAGGATGC+TGG + chr5_4:9988505-9988524 Msa0836500:CDS 45.0%
TAGGATGCTGGAAGTCAAAG+TGG + chr5_4:9988517-9988536 Msa0836500:CDS 45.0%
!! TGTTACTGATGGTGGAATCC+TGG - chr5_4:9988711-9988730 None:intergenic 45.0%
! CAAAGGGAGCAAAGTACCTT+TGG - chr5_4:9988933-9988952 None:intergenic 45.0%
GTCTGCAATGCACAGTCAAA+GGG - chr5_4:9988949-9988968 None:intergenic 45.0%
AGTCTGCAATGCACAGTCAA+AGG - chr5_4:9988950-9988969 None:intergenic 45.0%
CACTTTCGCAAATGCAGGTT+AGG + chr5_4:9989080-9989099 Msa0836500:intron 45.0%
ATATGGAAATGAAACCCCGC+TGG - chr5_4:9989537-9989556 None:intergenic 45.0%
GAAGATGACGTTAAGCCAAC+TGG + chr5_4:9989642-9989661 Msa0836500:CDS 45.0%
GCAACTAGATATGCAGCTCT+CGG + chr5_4:9989717-9989736 Msa0836500:CDS 45.0%
CCTACTTTGTATGACCATCC+CGG + chr5_4:9989744-9989763 Msa0836500:CDS 45.0%
! TCCTCAGAATTTGCTTCTGG+GGG - chr5_4:9989914-9989933 None:intergenic 45.0%
GTGTAGGATCCTAAGAGAAC+AGG + chr5_4:9990053-9990072 Msa0836500:intron 45.0%
ATCCTAAGAGAACAGGTCAC+AGG + chr5_4:9990060-9990079 Msa0836500:CDS 45.0%
TCCTAAGAGAACAGGTCACA+GGG + chr5_4:9990061-9990080 Msa0836500:CDS 45.0%
TAGCAGATCGTGTCTCTCTA+AGG + chr5_4:9990117-9990136 Msa0836500:CDS 45.0%
CTAAGGCCTCATGAGATTTG+TGG + chr5_4:9990134-9990153 Msa0836500:CDS 45.0%
TCGTGTCCACAAATCTCATG+AGG - chr5_4:9990143-9990162 None:intergenic 45.0%
TCATGAGATTTGTGGACACG+AGG + chr5_4:9990142-9990161 Msa0836500:CDS 45.0%
GCAAATTCCCTTCTAGTGGA+AGG - chr5_4:9990362-9990381 None:intergenic 45.0%
CTTTGTCAGGGTTTGAACCT+AGG - chr5_4:9990434-9990453 None:intergenic 45.0%
CTAGGTTCAAACCCTGACAA+AGG + chr5_4:9990432-9990451 Msa0836500:intron 45.0%
!! GAATCTTTTGGGGGATATGG+TGG + chr5_4:9990759-9990778 Msa0836500:CDS 45.0%
CGAAGTTATGGGAGGATGTA+CGG + chr5_4:9990789-9990808 Msa0836500:CDS 45.0%
! CAGAGTATCAAGAGCAGCTT+GGG + chr5_4:9991100-9991119 Msa0836500:CDS 45.0%
TCCTGATAATCTGCTCTCGA+TGG - chr5_4:9991129-9991148 None:intergenic 45.0%
GCAGATTATCAGGAGCAGAT+TGG + chr5_4:9991135-9991154 Msa0836500:CDS 45.0%
ATTATCAGGAGCAGATTGGG+AGG + chr5_4:9991139-9991158 Msa0836500:CDS 45.0%
GCCATCAAGAGCAGATTATC+AGG + chr5_4:9991161-9991180 Msa0836500:CDS 45.0%
TACCTCCAATCTGCTCTTGA+TGG - chr5_4:9991201-9991220 None:intergenic 45.0%
GAAACAGGAGGAACCTGAGA+CGG + chr5_4:9986754-9986773 Msa0836500:five_prime_UTR 50.0%
GTGTGAGAACGAGGTGGAAT+TGG + chr5_4:9987057-9987076 Msa0836500:five_prime_UTR 50.0%
GTGCACAATTGGCACAGTCA+TGG + chr5_4:9987655-9987674 Msa0836500:intron 50.0%
CAATTGGCACAGTCATGGTG+CGG + chr5_4:9987660-9987679 Msa0836500:intron 50.0%
AATTGGCACAGTCATGGTGC+GGG + chr5_4:9987661-9987680 Msa0836500:intron 50.0%
! TTCACAGCCTTGTGAGCTAC+AGG + chr5_4:9987766-9987785 Msa0836500:CDS 50.0%
ATTGGTCCTTGTCGGAAGGA+AGG - chr5_4:9987844-9987863 None:intergenic 50.0%
! GTAGATTGGTCCTTGTCGGA+AGG - chr5_4:9987848-9987867 None:intergenic 50.0%
GTGGCCAGAAAACAAACAGC+TGG - chr5_4:9987884-9987903 None:intergenic 50.0%
!! GTTTGTTTTCTGGCCACACC+AGG + chr5_4:9987887-9987906 Msa0836500:intron 50.0%
CCCTCTTCTATCACTTGGCT+TGG + chr5_4:9988038-9988057 Msa0836500:intron 50.0%
GCCAAGCCAAGTGATAGAAG+AGG - chr5_4:9988042-9988061 None:intergenic 50.0%
! ACTGGACGATCTCGTGGTTT+TGG + chr5_4:9988344-9988363 Msa0836500:CDS 50.0%
! ATCACGAGTTGGATGTCCTC+TGG + chr5_4:9988456-9988475 Msa0836500:intron 50.0%
ACAATACTTCCTGCAGCCAG+AGG - chr5_4:9988475-9988494 None:intergenic 50.0%
!! TGGCTGCAGGAAGTATTGTC+AGG + chr5_4:9988476-9988495 Msa0836500:intron 50.0%
AGTCAAAGTGGCTACACCGA+AGG + chr5_4:9988529-9988548 Msa0836500:CDS 50.0%
CAAGGCTCAAAGATGCATCG+TGG + chr5_4:9989045-9989064 Msa0836500:CDS 50.0%
GTTCTCTGTTGCAGAGTCTG+TGG + chr5_4:9989339-9989358 Msa0836500:intron 50.0%
TCAGAAACCCATGAACTCGG+AGG + chr5_4:9989373-9989392 Msa0836500:CDS 50.0%
AGCAGAACCTCCGAGTTCAT+GGG - chr5_4:9989383-9989402 None:intergenic 50.0%
CCAACTGGCAGAATGTCACA+GGG + chr5_4:9989657-9989676 Msa0836500:CDS 50.0%
CAACTGGCAGAATGTCACAG+GGG + chr5_4:9989658-9989677 Msa0836500:CDS 50.0%
AACTGGCAGAATGTCACAGG+GGG + chr5_4:9989659-9989678 Msa0836500:CDS 50.0%
CCGGGATGGTCATACAAAGT+AGG - chr5_4:9989747-9989766 None:intergenic 50.0%
TTCCATAAATTGGGCCGGGA+TGG - chr5_4:9989761-9989780 None:intergenic 50.0%
! CCTCAGAATTTGCTTCTGGG+GGG - chr5_4:9989913-9989932 None:intergenic 50.0%
CCTAAGAGAACAGGTCACAG+GGG + chr5_4:9990062-9990081 Msa0836500:CDS 50.0%
! AGAACAGGTCACAGGGGTTT+TGG + chr5_4:9990068-9990087 Msa0836500:CDS 50.0%
GGAAATCTGTAGGGCAGTGT+AGG + chr5_4:9990246-9990265 Msa0836500:intron 50.0%
!! TTCTAGTGGAAGGTGCCAAC+TGG - chr5_4:9990352-9990371 None:intergenic 50.0%
AGTTGGCACCTTCCACTAGA+AGG + chr5_4:9990351-9990370 Msa0836500:intron 50.0%
GTTGGCACCTTCCACTAGAA+GGG + chr5_4:9990352-9990371 Msa0836500:intron 50.0%
CAACAGTAGTTGGAGGTCCT+AGG + chr5_4:9990414-9990433 Msa0836500:intron 50.0%
CTGAATCTATTGCCACCTGC+AGG - chr5_4:9990683-9990702 None:intergenic 50.0%
!! TTTTGGGGGATATGGTGGTC+CGG + chr5_4:9990764-9990783 Msa0836500:CDS 50.0%
ATCCTCCCATAACTTCGCAC+CGG - chr5_4:9990786-9990805 None:intergenic 50.0%
AGTTATGGGAGGATGTACGG+TGG + chr5_4:9990792-9990811 Msa0836500:CDS 50.0%
CTGCATGGCAATAGTACTCC+TGG + chr5_4:9990989-9991008 Msa0836500:intron 50.0%
GCAATAGTACTCCTGGCATG+TGG + chr5_4:9990996-9991015 Msa0836500:intron 50.0%
! GCAGAGTATCAAGAGCAGCT+TGG + chr5_4:9991099-9991118 Msa0836500:CDS 50.0%
AGTATCAAGAGCAGCTTGGG+AGG + chr5_4:9991103-9991122 Msa0836500:CDS 50.0%
GCCATCGAGAGCAGATTATC+AGG + chr5_4:9991125-9991144 Msa0836500:CDS 50.0%
! CAAGAGCAGATTGGAGGTAC+AGG + chr5_4:9991202-9991221 Msa0836500:CDS 50.0%
CGATAGAGGGAGGAGGAAGA+GGG + chr5_4:9986784-9986803 Msa0836500:five_prime_UTR 55.0%
GAGAGAGTGGTGTGAGAACG+AGG + chr5_4:9987048-9987067 Msa0836500:five_prime_UTR 55.0%
AGAGTGGTGTGAGAACGAGG+TGG + chr5_4:9987051-9987070 Msa0836500:five_prime_UTR 55.0%
TCCTTGGGACGTTGATACCG+AGG + chr5_4:9987299-9987318 Msa0836500:CDS 55.0%
CCTTGGGACGTTGATACCGA+GGG + chr5_4:9987300-9987319 Msa0836500:CDS 55.0%
CTTGGGACGTTGATACCGAG+GGG + chr5_4:9987301-9987320 Msa0836500:CDS 55.0%
ATTGGCACAGTCATGGTGCG+GGG + chr5_4:9987662-9987681 Msa0836500:intron 55.0%
AACAAGCTGGAGTCCTGGTG+TGG - chr5_4:9987903-9987922 None:intergenic 55.0%
CGTTCAACTGGACGATCTCG+TGG + chr5_4:9988338-9988357 Msa0836500:CDS 55.0%
TGCTTCAGTGGATGACGCCA+AGG + chr5_4:9988379-9988398 Msa0836500:CDS 55.0%
CAGCAGAACCTCCGAGTTCA+TGG - chr5_4:9989384-9989403 None:intergenic 55.0%
TGAACTCGGAGGTTCTGCTG+TGG + chr5_4:9989384-9989403 Msa0836500:CDS 55.0%
GGTTGATCGAGCTACACCCA+AGG + chr5_4:9989408-9989427 Msa0836500:CDS 55.0%
GCCAACTGGCAGAATGTCAC+AGG + chr5_4:9989656-9989675 Msa0836500:CDS 55.0%
CCCTGTGACATTCTGCCAGT+TGG - chr5_4:9989660-9989679 None:intergenic 55.0%
ACTGGCAGAATGTCACAGGG+GGG + chr5_4:9989660-9989679 Msa0836500:CDS 55.0%
ATGTCACAGGGGGGAGGATA+TGG + chr5_4:9989669-9989688 Msa0836500:CDS 55.0%
GACCATCCCGGCCCAATTTA+TGG + chr5_4:9989756-9989775 Msa0836500:CDS 55.0%
AATTAGGGGGAGAGCCTCGT+CGG + chr5_4:9989855-9989874 Msa0836500:intron 55.0%
! CAGAATTTGCTTCTGGGGGG+AGG - chr5_4:9989910-9989929 None:intergenic 55.0%
CCCCCCAGAAGCAAATTCTG+AGG + chr5_4:9989910-9989929 Msa0836500:CDS 55.0%
CCCCTGTGACCTGTTCTCTT+AGG - chr5_4:9990065-9990084 None:intergenic 55.0%
CCTAGCATCGTCAACAGGTG+TGG - chr5_4:9990706-9990725 None:intergenic 55.0%
CCACACCTGTTGACGATGCT+AGG + chr5_4:9990703-9990722 Msa0836500:CDS 55.0%
GTGGTCCGGTGCGAAGTTAT+GGG + chr5_4:9990778-9990797 Msa0836500:CDS 55.0%
GTTACGGAGTTCCCAGTGTG+AGG + chr5_4:9991067-9991086 Msa0836500:CDS 55.0%
! GCTCTTGATGGCCTCACACT+GGG - chr5_4:9991081-9991100 None:intergenic 55.0%
! TGCTCTTGATGGCCTCACAC+TGG - chr5_4:9991082-9991101 None:intergenic 55.0%
GGAGGCCATCAAGAGCAGAT+TGG + chr5_4:9991157-9991176 Msa0836500:CDS 55.0%
GGCCATCAAGAGCAGATTGG+AGG + chr5_4:9991196-9991215 Msa0836500:CDS 55.0%
AGGAGGAACCTGAGACGGTG+CGG + chr5_4:9986759-9986778 Msa0836500:five_prime_UTR 60.0%
AGACGGTGCGGAGCGATAGA+GGG + chr5_4:9986771-9986790 Msa0836500:five_prime_UTR 60.0%
GCGATAGAGGGAGGAGGAAG+AGG + chr5_4:9986783-9986802 Msa0836500:five_prime_UTR 60.0%
CCCTCGGTATCAACGTCCCA+AGG - chr5_4:9987303-9987322 None:intergenic 60.0%
TGCGCGACCTGTAGCTCACA+AGG - chr5_4:9987776-9987795 None:intergenic 60.0%
TGAGCTACAGGTCGCGCACT+TGG + chr5_4:9987778-9987797 Msa0836500:CDS 60.0%
GAGCTACAGGTCGCGCACTT+GGG + chr5_4:9987779-9987798 Msa0836500:CDS 60.0%
TACAGGTCGCGCACTTGGGA+AGG + chr5_4:9987783-9987802 Msa0836500:CDS 60.0%
ACAGGTCGCGCACTTGGGAA+GGG + chr5_4:9987784-9987803 Msa0836500:CDS 60.0%
TGGCTGCCTTCCTTCCGACA+AGG + chr5_4:9987835-9987854 Msa0836500:CDS 60.0%
GTTGGATGTCCTCTGGCTGC+AGG + chr5_4:9988463-9988482 Msa0836500:intron 60.0%
ACTCGGAGGTTCTGCTGTGG+TGG + chr5_4:9989387-9989406 Msa0836500:CDS 60.0%
GACTGGCAGCTTGTACCTGC+AGG + chr5_4:9990665-9990684 Msa0836500:intron 60.0%
TGGCAGCTTGTACCTGCAGG+TGG + chr5_4:9990668-9990687 Msa0836500:intron 60.0%
CTGGGCCTAGCATCGTCAAC+AGG - chr5_4:9990711-9990730 None:intergenic 60.0%
GTTGACGATGCTAGGCCCAG+CGG + chr5_4:9990711-9990730 Msa0836500:CDS 60.0%
GGTGGTCCGGTGCGAAGTTA+TGG + chr5_4:9990777-9990796 Msa0836500:CDS 60.0%
GTCCGGTGCGAAGTTATGGG+AGG + chr5_4:9990781-9990800 Msa0836500:CDS 60.0%
CTATCGCTCCGCACCGTCTC+AGG - chr5_4:9986770-9986789 None:intergenic 65.0%
GAGACGGTGCGGAGCGATAG+AGG + chr5_4:9986770-9986789 Msa0836500:five_prime_UTR 65.0%
TGCGGAGCGATAGAGGGAGG+AGG + chr5_4:9986777-9986796 Msa0836500:five_prime_UTR 65.0%
GTCGTTGCCCCAAATCGCGC+TGG + chr5_4:9987738-9987757 Msa0836500:CDS 65.0%
GTCGGAAGGAAGGCAGCCAC+AGG - chr5_4:9987834-9987853 None:intergenic 65.0%
GGCAGAATGTCACAGGGGGG+AGG + chr5_4:9989663-9989682 Msa0836500:CDS 65.0%
CGGTGCGGAGCGATAGAGGG+AGG + chr5_4:9986774-9986793 Msa0836500:five_prime_UTR 70.0%
GGCACAGTCATGGTGCGGGG+TGG + chr5_4:9987665-9987684 Msa0836500:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 9986734 9991233 9986734 ID=Msa0836500;Name=Msa0836500
chr5_4 mRNA 9986734 9991233 9986734 ID=Msa0836500-mRNA-1;Parent=Msa0836500;Name=Msa0836500-mRNA-1;_AED=0.08;_eAED=0.08;_QI=250|0.8|0.75|0.93|0.8|0.75|16|0|491
chr5_4 exon 9986734 9986860 9986734 ID=Msa0836500-mRNA-1:exon:4418;Parent=Msa0836500-mRNA-1
chr5_4 exon 9987027 9987170 9987027 ID=Msa0836500-mRNA-1:exon:4419;Parent=Msa0836500-mRNA-1
chr5_4 exon 9987288 9987377 9987288 ID=Msa0836500-mRNA-1:exon:4420;Parent=Msa0836500-mRNA-1
chr5_4 exon 9987672 9987890 9987672 ID=Msa0836500-mRNA-1:exon:4421;Parent=Msa0836500-mRNA-1
chr5_4 exon 9988335 9988400 9988335 ID=Msa0836500-mRNA-1:exon:4422;Parent=Msa0836500-mRNA-1
chr5_4 exon 9988485 9988550 9988485 ID=Msa0836500-mRNA-1:exon:4423;Parent=Msa0836500-mRNA-1
chr5_4 exon 9988662 9988747 9988662 ID=Msa0836500-mRNA-1:exon:4424;Parent=Msa0836500-mRNA-1
chr5_4 exon 9988890 9988935 9988890 ID=Msa0836500-mRNA-1:exon:4425;Parent=Msa0836500-mRNA-1
chr5_4 exon 9989042 9989096 9989042 ID=Msa0836500-mRNA-1:exon:4426;Parent=Msa0836500-mRNA-1
chr5_4 exon 9989353 9989485 9989353 ID=Msa0836500-mRNA-1:exon:4427;Parent=Msa0836500-mRNA-1
chr5_4 exon 9989587 9989593 9989587 ID=Msa0836500-mRNA-1:exon:4428;Parent=Msa0836500-mRNA-1
chr5_4 exon 9989642 9989780 9989642 ID=Msa0836500-mRNA-1:exon:4429;Parent=Msa0836500-mRNA-1
chr5_4 exon 9989861 9989988 9989861 ID=Msa0836500-mRNA-1:exon:4430;Parent=Msa0836500-mRNA-1
chr5_4 exon 9990059 9990163 9990059 ID=Msa0836500-mRNA-1:exon:4431;Parent=Msa0836500-mRNA-1
chr5_4 exon 9990687 9990830 9990687 ID=Msa0836500-mRNA-1:exon:4432;Parent=Msa0836500-mRNA-1
chr5_4 exon 9991063 9991233 9991063 ID=Msa0836500-mRNA-1:exon:4433;Parent=Msa0836500-mRNA-1
chr5_4 five_prime_UTR 9986734 9986860 9986734 ID=Msa0836500-mRNA-1:five_prime_utr;Parent=Msa0836500-mRNA-1
chr5_4 five_prime_UTR 9987027 9987149 9987027 ID=Msa0836500-mRNA-1:five_prime_utr;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9987150 9987170 9987150 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9987288 9987377 9987288 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9987672 9987890 9987672 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9988335 9988400 9988335 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9988485 9988550 9988485 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9988662 9988747 9988662 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9988890 9988935 9988890 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9989042 9989096 9989042 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9989353 9989485 9989353 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9989587 9989593 9989587 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9989642 9989780 9989642 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9989861 9989988 9989861 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9990059 9990163 9990059 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9990687 9990830 9990687 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
chr5_4 CDS 9991063 9991233 9991063 ID=Msa0836500-mRNA-1:cds;Parent=Msa0836500-mRNA-1
Gene Sequence

>Msa0836500

ATGGAGCAGAGAAAGCTTGTGGTTTTGGGGATTCCTTGGGACGTTGATACCGAGGGGTTGAAAGAATATATGAGCAAATATGGTGAATTAGAAGATTGCATTGTCATGAAGTCATGGTGCGGGGTGGAGTCCTGCAGTGACGCAATTATTTGGTGCTTGCATTTTGTAGGGGCAGCTGTCGTTGCCCCAAATCGCGCTGGTATCATTCACAGCCTTGTGAGCTACAGGTCGCGCACTTGGGAAGGGAAATCCGAAAGAAAAGAAGGAAAACCTGTGGCTGCCTTCCTTCCGACAAGGACCAATCTACCTGTGTTTTCTGACCAGCTGTTTGAGCGTTCAACTGGACGATCTCGTGGTTTTGGATATGTTACATTTGCTTCAGTGGATGACGCCAAGGAAGTATTGTCAGGTGAACATGTTCTTGGTGATAGGATGCTGGAAGTCAAAGTGGCTACACCGAAGGAGGAGATGAGGGCACCAGCCAAAAAAGTTACCAGAATTTTTGTGGCCAGGATTCCACCATCAGTAACAGAAGAAACTTTTAGAAGTCATTTTGAGAAATATGGTGATATAACAGATTTGTACATGCCAAAGGATCAAGGCTCAAAGATGCATCGTGGAATTGGTTTTATCACTTTCGCAAATGCAGAGTCTGTGGAGAATTTGATGTCAGAAACCCATGAACTCGGAGGTTCTGCTGTGGTGGTTGATCGAGCTACACCCAAGGCAAGTTTGTATAGCTTCTCATTTTATGGAAGAATAATTTGCGAAATTCGAGAATGGATATTTGAAGATGACGTTAAGCCAACTGGCAGAATGTCACAGGGGGGAGGATATGGTGCATACAATGCATATATTTCTACAGCAACTAGATATGCAGCTCTCGGAGCTCCTACTTTGTATGACCATCCCGGCCCAATTTATGGAAGGGGAGAGCCTCGTCGGAGAATTAGTAAAAAGATTTTTGTTGGTCGCCTCCCCCCAGAAGCAAATTCTGAGGATCTCCGTCAATATTTTGGAAGATTTGGCCGCATAGAAGATGTTTACATTCCCAGAGATCCTAAGAGAACAGGTCACAGGGGTTTTGGATTTGTTACTTTTGCTGATGAGGGCGTAGCAGATCGTGTCTCTCTAAGGCCTCATGAGATTTGTGGACACGAGGTGGCAATAGATTCAGCCACACCTGTTGACGATGCTAGGCCCAGCGGAAATTTTATGATGAACAATAGTATGGAATCTTTTGGGGGATATGGTGGTCCGGTGCGAAGTTATGGGAGGATGTACGGTGGTTTAGACTATGATGATTGGGGTTACGGAGTTCCCAGTGTGAGGCCATCAAGAGCAGAGTATCAAGAGCAGCTTGGGAGGCCATCGAGAGCAGATTATCAGGAGCAGATTGGGAGGCCATCAAGAGCAGATTATCAGGAGCATATTGGGAGGCCATCAAGAGCAGATTGGAGGTACAGGCCATACTAG
Protein sequence

>Msa0836500

MEQRKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKSWCGVESCSDAIIWCLHFVGAAVVAPNRAGIIHSLVSYRSRTWEGKSERKEGKPVAAFLPTRTNLPVFSDQLFERSTGRSRGFGYVTFASVDDAKEVLSGEHVLGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFANAESVENLMSETHELGGSAVVVDRATPKASLYSFSFYGRIICEIREWIFEDDVKPTGRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRLPPEANSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAIDSATPVDDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPSRAEYQEQLGRPSRADYQEQIGRPSRADYQEHIGRPSRADWRYRPY*