AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0090030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0090030 MtrunA17_Chr1g0213491 94.318 352 4 1 3 338 10 361 0.0 664
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0090030 AT4G10430.1 68.481 349 91 2 6 338 2 347 1.67e-173 485
Msa0090030 AT4G10430.3 68.481 349 91 2 6 338 2 347 1.67e-173 485
Msa0090030 AT1G33230.1 69.733 337 83 2 17 337 14 347 2.23e-169 475
Msa0090030 AT1G33230.2 75.912 274 50 1 80 337 81 354 3.56e-156 442
Msa0090030 AT4G10430.4 72.285 267 71 1 6 272 2 265 4.45e-141 401
Msa0090030 AT4G10430.6 72.285 267 71 1 6 272 2 265 4.45e-141 401
Msa0090030 AT4G10430.9 72.285 267 71 1 6 272 2 265 4.45e-141 401
Msa0090030 AT4G10430.5 72.285 267 71 1 6 272 2 265 4.45e-141 401
Msa0090030 AT4G10430.7 72.285 267 71 1 6 272 2 265 7.75e-141 401
Msa0090030 AT4G10430.8 83.598 189 31 0 84 272 1 189 4.94e-120 345
Msa0090030 AT4G10430.2 83.598 189 31 0 84 272 1 189 1.15e-119 345

Find 82 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCATCTAAAGAGTAAATT+TGG 0.164928 1_2:+71865079 Msa0090030:three_prime_UTR
ACCTCTATTGTACACTCTTT+TGG 0.190214 1_2:+71865135 Msa0090030:three_prime_UTR
GTTGGTAAAGTCAAGATTTA+AGG 0.208316 1_2:+71864901 Msa0090030:CDS
CGAGAGGCACGAACATTAAT+TGG 0.209868 1_2:-71861570 None:intergenic
AGAAGAAGCTAAAGAGATTC+AGG 0.250609 1_2:+71861131 Msa0090030:CDS
CACTTCTCATTCTAAGATCT+TGG 0.270929 1_2:+71862085 Msa0090030:CDS
TCATTCTAAGATCTTGGGTT+TGG 0.289517 1_2:+71862091 Msa0090030:CDS
GAGAACATATTGAGAGTAAA+TGG 0.297201 1_2:+71862294 Msa0090030:CDS
CATTCTAAGATCTTGGGTTT+GGG 0.313165 1_2:+71862092 Msa0090030:CDS
TGCTCAGAACTGCATTTGTT+GGG 0.327140 1_2:+71864652 Msa0090030:CDS
TGCATGTCTAGTGATTATTT+TGG 0.334914 1_2:+71865032 Msa0090030:three_prime_UTR
AAGAGGAATACAACAGTTAC+AGG 0.348052 1_2:+71861616 Msa0090030:CDS
TTGGGTCGCCATACTTGTTC+CGG 0.348631 1_2:+71865154 Msa0090030:three_prime_UTR
TCATTATTGTGCCATGATAA+TGG 0.352720 1_2:+71863241 Msa0090030:CDS
GCTATTTCTTTACACTGGTT+TGG 0.353138 1_2:+71862263 Msa0090030:CDS
AGTCTCACTTGGGAAATAAA+AGG 0.361860 1_2:+71863272 Msa0090030:CDS
ATTCAGTCTCTGCTTGCTCT+TGG 0.362711 1_2:-71864939 None:intergenic
GATGCTTCTTACCTCCTTCC+TGG 0.371718 1_2:+71861420 Msa0090030:CDS
AAGAAAAGAAAAGAGTTGAT+TGG 0.376177 1_2:+71861021 Msa0090030:five_prime_UTR
CTACGTCACCGGAACAAGTA+TGG 0.383151 1_2:-71865162 None:intergenic
TCAACCATCTTTAGCTGATA+AGG 0.392804 1_2:+71861284 Msa0090030:CDS
GAAGAGAAGAAGAGGTTCAA+TGG 0.405539 1_2:+71861068 Msa0090030:exon
TTGCTCAGAACTGCATTTGT+TGG 0.406680 1_2:+71864651 Msa0090030:CDS
ACTTCTCATTCTAAGATCTT+GGG 0.408886 1_2:+71862086 Msa0090030:CDS
GCCAGATGCATCATCGTTGA+TGG 0.420149 1_2:+71861396 Msa0090030:CDS
CGGTCTCCTGTTGGTTGTCA+TGG 0.422234 1_2:+71864844 Msa0090030:CDS
CTAAGAGGATGGATGTTGTA+TGG 0.431027 1_2:+71863806 Msa0090030:CDS
CTGTTGGTTGTCATGGCCAT+TGG 0.440508 1_2:+71864851 Msa0090030:CDS
AGGATGATGATTGAATATTT+CGG 0.442937 1_2:+71865186 Msa0090030:three_prime_UTR
CTTTATACTCGTATTGCGTT+GGG 0.451111 1_2:+71863484 Msa0090030:CDS
CTCCTTCCTGGACGTGCTCA+AGG 0.455792 1_2:+71861432 Msa0090030:CDS
TGTTGGTTGTCATGGCCATT+GGG 0.457433 1_2:+71864852 Msa0090030:CDS
CAGAACTGCATTTGTTGGGG+TGG 0.458831 1_2:+71864656 Msa0090030:CDS
GCCATCAACGATGATGCATC+TGG 0.467300 1_2:-71861397 None:intergenic
AGTACCTGGTAAATCTGTAC+TGG 0.468262 1_2:-71862135 None:intergenic
GCTTTATACTCGTATTGCGT+TGG 0.475449 1_2:+71863483 Msa0090030:CDS
TCTTTGAATTATAGGCTAAG+AGG 0.476272 1_2:+71863791 Msa0090030:intron
TGGGGTGGCTTCTGAATGGC+AGG 0.477673 1_2:+71864671 Msa0090030:CDS
CTTAGAATGAGAAGTGCTGC+TGG 0.479516 1_2:-71862078 None:intergenic
TGGCCCTTGTGAGTCTCACT+TGG 0.486035 1_2:+71863261 Msa0090030:CDS
TGGCTGCTATTTCTTTACAC+TGG 0.488932 1_2:+71862258 Msa0090030:CDS
TCTAAGATCTTGGGTTTGGG+AGG 0.490954 1_2:+71862095 Msa0090030:CDS
CTAAGATCTTGGGTTTGGGA+GGG 0.495096 1_2:+71862096 Msa0090030:CDS
GCTTACTTGAATGAATGTAA+AGG 0.495493 1_2:+71865254 Msa0090030:three_prime_UTR
TTGTTGGGGTGGCTTCTGAA+TGG 0.501334 1_2:+71864667 Msa0090030:CDS
TAAGAGGATGGATGTTGTAT+GGG 0.503535 1_2:+71863807 Msa0090030:CDS
ACTTGTTCCGGTGACGTAGC+AGG 0.504376 1_2:+71865166 Msa0090030:three_prime_UTR
TACTCGTATTGCGTTGGGAA+AGG 0.514448 1_2:+71863489 Msa0090030:CDS
CAATGGCCATGACAACCAAC+AGG 0.515846 1_2:-71864850 None:intergenic
TATATTGGTTCAGGGATTTG+AGG 0.518924 1_2:+71864611 Msa0090030:intron
ACTCACAAGGGCCATTATCA+TGG 0.523040 1_2:-71863252 None:intergenic
AGGTTCAATGGAAGAATCAA+AGG 0.539036 1_2:+71861080 Msa0090030:exon
TAAATCTGTACTGGAAAAGC+TGG 0.542899 1_2:-71862126 None:intergenic
CGTACCTTATCAGCTAAAGA+TGG 0.544500 1_2:-71861288 None:intergenic
TCATCATCCTGCTACGTCAC+CGG 0.545961 1_2:-71865173 None:intergenic
CCCAAAAGAGTGTACAATAG+AGG 0.546830 1_2:-71865136 None:intergenic
TGAGAAGAGAAGAGAAGAAG+AGG 0.550186 1_2:+71861060 Msa0090030:five_prime_UTR
AAGAAACCTTGAGCACGTCC+AGG 0.552105 1_2:-71861438 None:intergenic
TCGCAAGGATGTTCAGCTCA+AGG 0.568890 1_2:+71861590 Msa0090030:CDS
GCTCAGAACTGCATTTGTTG+GGG 0.574408 1_2:+71864653 Msa0090030:CDS
CAGGGATTTGAGGCATATGT+CGG 0.578726 1_2:+71864621 Msa0090030:intron
AAAATAGATATCAACGGCAA+AGG 0.582391 1_2:+71863461 Msa0090030:CDS
TAATGTTCGTGCCTCTCGCA+AGG 0.587007 1_2:+71861575 Msa0090030:CDS
CTACAGTGGGCTATGATGCA+AGG 0.587397 1_2:+71863421 Msa0090030:CDS
AAATACAGTTCAGACTCTGT+TGG 0.591274 1_2:+71864883 Msa0090030:CDS
TTTCCCAAGTGAGACTCACA+AGG 0.597093 1_2:-71863265 None:intergenic
TAATGTCTTTGAGATGTGAA+CGG 0.599008 1_2:-71861163 None:intergenic
CTTGAGCACGTCCAGGAAGG+AGG 0.605518 1_2:-71861431 None:intergenic
TGAATTATAGGCTAAGAGGA+TGG 0.614666 1_2:+71863795 Msa0090030:intron
CTTGCATCATAGCCCACTGT+AGG 0.615039 1_2:-71863420 None:intergenic
ACAAGGGCACGCTGACGAAG+TGG 0.615895 1_2:-71861198 None:intergenic
AAGAGGATGGATGTTGTATG+GGG 0.617879 1_2:+71863808 Msa0090030:CDS
AACCTTGAGCACGTCCAGGA+AGG 0.620130 1_2:-71861434 None:intergenic
GTTGTATGGGGAGAAACAGC+TGG 0.623308 1_2:+71863820 Msa0090030:CDS
GGCCCTTGTGAGTCTCACTT+GGG 0.623892 1_2:+71863262 Msa0090030:CDS
ATGGAAGTGATATTCGTCCA+TGG 0.625077 1_2:+71862313 Msa0090030:CDS
AGTGTAAAGAAATAGCAGCC+AGG 0.633016 1_2:-71862256 None:intergenic
AGAGGAATACAACAGTTACA+GGG 0.648843 1_2:+71861617 Msa0090030:CDS
GAGCTGAACATCCTTGCGAG+AGG 0.657636 1_2:-71861586 None:intergenic
TGTTCAGCTCAAGGTCAAAG+AGG 0.660588 1_2:+71861599 Msa0090030:CDS
TTCCCAAGTGAGACTCACAA+GGG 0.703885 1_2:-71863264 None:intergenic
TAATCACTAGACATGCACAG+TGG 0.795914 1_2:-71865026 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATAAAGAAATTGAAAA+TGG - chr1_2:71861334-71861353 None:intergenic 10.0%
!!! TTTTCAATTTCTTTATTTAA+TGG + chr1_2:71861334-71861353 Msa0090030:intron 10.0%
!!! TTTTTTTTTTTTTTACTGTT+AGG + chr1_2:71861683-71861702 Msa0090030:intron 10.0%
!! TTATATATCAAAATTTGAAT+AGG + chr1_2:71864729-71864748 Msa0090030:intron 10.0%
!!! ACTTAAATTTTAGGTAATTA+TGG - chr1_2:71861726-71861745 None:intergenic 15.0%
!! GTTATTATTATTAATCAAAC+TGG + chr1_2:71861744-71861763 Msa0090030:intron 15.0%
!! ACCATAAAATTAATATCATA+GGG - chr1_2:71863716-71863735 None:intergenic 15.0%
!! AACCATAAAATTAATATCAT+AGG - chr1_2:71863717-71863736 None:intergenic 15.0%
!!! CTTTTCTTTTCTAAAAATTA+AGG - chr1_2:71864074-71864093 None:intergenic 15.0%
!! AATAATCTTAAAAAAGATCA+TGG - chr1_2:71865223-71865242 None:intergenic 15.0%
!! AAAAAATGATTAACATGCAA+GGG - chr1_2:71861665-71861684 None:intergenic 20.0%
!! AAAAAAATGATTAACATGCA+AGG - chr1_2:71861666-71861685 None:intergenic 20.0%
!!! TTTTTTTTTACTGTTAGGAA+AGG + chr1_2:71861688-71861707 Msa0090030:intron 20.0%
!! TTATTATTAATCAAACTGGA+AGG + chr1_2:71861748-71861767 Msa0090030:intron 20.0%
!!! TTGTTATTGACTTTTTAACT+AGG - chr1_2:71861790-71861809 None:intergenic 20.0%
!!! TTGTGAAACTTTTATGAAAA+TGG + chr1_2:71862009-71862028 Msa0090030:intron 20.0%
!! AGACATTATTTCAATTAGTT+CGG + chr1_2:71862569-71862588 Msa0090030:intron 20.0%
!!! TTCTCTTTTACGATAATAAA+GGG - chr1_2:71863018-71863037 None:intergenic 20.0%
!!! ATTCTCTTTTACGATAATAA+AGG - chr1_2:71863019-71863038 None:intergenic 20.0%
!!! TTTTGCAAAATAGATATCAA+CGG + chr1_2:71863455-71863474 Msa0090030:CDS 20.0%
!! TAAAATATACTATTTAGCAG+TGG - chr1_2:71863517-71863536 None:intergenic 20.0%
!!! TCCCTATGATATTAATTTTA+TGG + chr1_2:71863712-71863731 Msa0090030:intron 20.0%
!!! TCTCATTTTCTTTGAATTAT+AGG + chr1_2:71863783-71863802 Msa0090030:intron 20.0%
!!! TTATTAAGTCCAAGTTTTTT+TGG + chr1_2:71864249-71864268 Msa0090030:intron 20.0%
!!! TTATTTTTTGATAAGCTGTT+TGG + chr1_2:71864338-71864357 Msa0090030:intron 20.0%
!! GAAGAGTTAATATCATTATA+AGG - chr1_2:71864807-71864826 None:intergenic 20.0%
!! TAAAAAAGTGATGAGTTGAA+TGG + chr1_2:71860997-71861016 Msa0090030:five_prime_UTR 25.0%
!! AAAAAAGTGATGAGTTGAAT+GGG + chr1_2:71860998-71861017 Msa0090030:five_prime_UTR 25.0%
!! AAGAAAAGAAAAGAGTTGAT+TGG + chr1_2:71861021-71861040 Msa0090030:five_prime_UTR 25.0%
!!! TTATTGACTTTTTAACTAGG+TGG - chr1_2:71861787-71861806 None:intergenic 25.0%
! ATTATTTCAATTAGTTCGGA+CGG + chr1_2:71862573-71862592 Msa0090030:intron 25.0%
! AAACAAACAGTTTCAAACAA+AGG - chr1_2:71862814-71862833 None:intergenic 25.0%
!!! TTTGAAACTGTTTGTTTTTG+AGG + chr1_2:71862817-71862836 Msa0090030:intron 25.0%
! TCTTTCATAATTGCTTAAAG+AGG + chr1_2:71862985-71863004 Msa0090030:intron 25.0%
! CTTTGTACTCAATCTAATAT+GGG - chr1_2:71863062-71863081 None:intergenic 25.0%
! TCTTTGTACTCAATCTAATA+TGG - chr1_2:71863063-71863082 None:intergenic 25.0%
! ATTAGATTGAGTACAAAGAA+TGG + chr1_2:71863064-71863083 Msa0090030:intron 25.0%
! TTAGATTGAGTACAAAGAAT+GGG + chr1_2:71863065-71863084 Msa0090030:intron 25.0%
!!! ATTTTCATTCCTTGTTTACA+TGG + chr1_2:71863165-71863184 Msa0090030:intron 25.0%
!!! TTTTCATTCCTTGTTTACAT+GGG + chr1_2:71863166-71863185 Msa0090030:intron 25.0%
! CATCAAAAAGAAAAAGCTAA+TGG - chr1_2:71863342-71863361 None:intergenic 25.0%
! CTATTTCCAATCAATATGTT+TGG - chr1_2:71863748-71863767 None:intergenic 25.0%
! TTATTCCAAAAACATAAGGA+TGG - chr1_2:71864120-71864139 None:intergenic 25.0%
! GCAATTATTCCAAAAACATA+AGG - chr1_2:71864124-71864143 None:intergenic 25.0%
!!! TTTTGGAATAATTGCACATT+TGG + chr1_2:71864129-71864148 Msa0090030:intron 25.0%
! ATAATAGCACCAAAAAAACT+TGG - chr1_2:71864261-71864280 None:intergenic 25.0%
! GTAACTGTTTAACTCAATAT+AGG - chr1_2:71864313-71864332 None:intergenic 25.0%
! GCATATATCATGTGTTAATA+TGG + chr1_2:71864420-71864439 Msa0090030:intron 25.0%
! ATTCGCGAAAATTGAATTAT+CGG + chr1_2:71864518-71864537 Msa0090030:intron 25.0%
!! TATCGGATTTATTCATGTTT+TGG + chr1_2:71864535-71864554 Msa0090030:intron 25.0%
! CATTAAAATGATTCTGATTC+TGG + chr1_2:71864756-71864775 Msa0090030:intron 25.0%
! ATGCATCTAAAGAGTAAATT+TGG + chr1_2:71865079-71865098 Msa0090030:three_prime_UTR 25.0%
! AGGATGATGATTGAATATTT+CGG + chr1_2:71865186-71865205 Msa0090030:three_prime_UTR 25.0%
! AATCTTAAAAAAGATCATGG+AGG - chr1_2:71865220-71865239 None:intergenic 25.0%
!! TAATGTCTTTGAGATGTGAA+CGG - chr1_2:71861166-71861185 None:intergenic 30.0%
!!! GATTTTAGAATCGAGAACAA+GGG - chr1_2:71861217-71861236 None:intergenic 30.0%
!!! TGATTTTAGAATCGAGAACA+AGG - chr1_2:71861218-71861237 None:intergenic 30.0%
GAAAATGGAGAATAAAGAGT+TGG - chr1_2:71861319-71861338 None:intergenic 30.0%
CATCTAACTGCGATAATAAA+CGG - chr1_2:71861362-71861381 None:intergenic 30.0%
!! TAAGTTTCTGAGGATGTTTT+TGG + chr1_2:71861545-71861564 Msa0090030:CDS 30.0%
!! AAGTTTCTGAGGATGTTTTT+GGG + chr1_2:71861546-71861565 Msa0090030:CDS 30.0%
!! ACTTCTCATTCTAAGATCTT+GGG + chr1_2:71862086-71862105 Msa0090030:CDS 30.0%
!! TTGGTTTAAAAGAAAGTACC+TGG - chr1_2:71862152-71862171 None:intergenic 30.0%
AACATGACATGAAACAAGAT+TGG - chr1_2:71862171-71862190 None:intergenic 30.0%
GAGAACATATTGAGAGTAAA+TGG + chr1_2:71862294-71862313 Msa0090030:CDS 30.0%
CAGAAATCCTGGATTAAAAA+GGG - chr1_2:71862352-71862371 None:intergenic 30.0%
ATATAAACTACCAGAAATCC+TGG - chr1_2:71862363-71862382 None:intergenic 30.0%
TGATCCTTGTGAAACAATAA+TGG + chr1_2:71862388-71862407 Msa0090030:intron 30.0%
ATCAAGATGTGGAATTTGAA+TGG - chr1_2:71862528-71862547 None:intergenic 30.0%
TTATTTCAATTAGTTCGGAC+GGG + chr1_2:71862574-71862593 Msa0090030:intron 30.0%
! GCAATGTTTAAGCTTTATGA+TGG + chr1_2:71862600-71862619 Msa0090030:intron 30.0%
! ATGTTTAAGCTTTATGATGG+AGG + chr1_2:71862603-71862622 Msa0090030:intron 30.0%
! TGTTTAAGCTTTATGATGGA+GGG + chr1_2:71862604-71862623 Msa0090030:intron 30.0%
AACTCAATAAGTTCAGAAAC+AGG - chr1_2:71862901-71862920 None:intergenic 30.0%
!! GAACTTATTGAGTTTTTCAG+TGG + chr1_2:71862907-71862926 Msa0090030:intron 30.0%
TTGCTATGCAAGATAGAAAA+AGG - chr1_2:71862936-71862955 None:intergenic 30.0%
! AATTTTGTCCCATGTAAACA+AGG - chr1_2:71863177-71863196 None:intergenic 30.0%
TTACATGGGACAAAATTGTT+TGG + chr1_2:71863180-71863199 Msa0090030:intron 30.0%
TCATTATTGTGCCATGATAA+TGG + chr1_2:71863241-71863260 Msa0090030:CDS 30.0%
AAAGAAAAAGCTAATGGTCA+GGG - chr1_2:71863336-71863355 None:intergenic 30.0%
AAAAGAAAAAGCTAATGGTC+AGG - chr1_2:71863337-71863356 None:intergenic 30.0%
AAAATAGATATCAACGGCAA+AGG + chr1_2:71863461-71863480 Msa0090030:CDS 30.0%
AAATAGTGAGAAAAAGACTC+GGG - chr1_2:71863618-71863637 None:intergenic 30.0%
CAAATAGTGAGAAAAAGACT+CGG - chr1_2:71863619-71863638 None:intergenic 30.0%
CTTTCTCCAAACATATTGAT+TGG + chr1_2:71863739-71863758 Msa0090030:intron 30.0%
TCTTTGAATTATAGGCTAAG+AGG + chr1_2:71863791-71863810 Msa0090030:intron 30.0%
! ACCTGCAATATGAAAAGTAT+GGG - chr1_2:71863874-71863893 None:intergenic 30.0%
TACCTGCAATATGAAAAGTA+TGG - chr1_2:71863875-71863894 None:intergenic 30.0%
TCATAAGTAGCCATATAGTA+TGG - chr1_2:71863899-71863918 None:intergenic 30.0%
!! TATGTTTGGGAGTTTGATTT+TGG + chr1_2:71863939-71863958 Msa0090030:intron 30.0%
TGCTTCGAAATTTATTGTTC+TGG + chr1_2:71864473-71864492 Msa0090030:intron 30.0%
!! TTTTGGAAATAACCTGAACT+TGG + chr1_2:71864552-71864571 Msa0090030:intron 30.0%
CTTTCTTTGTGATCCTATAT+TGG + chr1_2:71864596-71864615 Msa0090030:intron 30.0%
AATGAAGTAAAAAAGCAAGC+AGG - chr1_2:71864709-71864728 None:intergenic 30.0%
!! TGTATTTTGAAAGTTCCCAA+TGG - chr1_2:71864870-71864889 None:intergenic 30.0%
! GTTGGTAAAGTCAAGATTTA+AGG + chr1_2:71864901-71864920 Msa0090030:CDS 30.0%
! TGCATGTCTAGTGATTATTT+TGG + chr1_2:71865032-71865051 Msa0090030:three_prime_UTR 30.0%
GCTTACTTGAATGAATGTAA+AGG + chr1_2:71865254-71865273 Msa0090030:three_prime_UTR 30.0%
AGGTTCAATGGAAGAATCAA+AGG + chr1_2:71861080-71861099 Msa0090030:exon 35.0%
AGAAGAAGCTAAAGAGATTC+AGG + chr1_2:71861131-71861150 Msa0090030:CDS 35.0%
TCAACCATCTTTAGCTGATA+AGG + chr1_2:71861284-71861303 Msa0090030:CDS 35.0%
AAGAGGAATACAACAGTTAC+AGG + chr1_2:71861616-71861635 Msa0090030:CDS 35.0%
AGAGGAATACAACAGTTACA+GGG + chr1_2:71861617-71861636 Msa0090030:CDS 35.0%
AAATGATTAACATGCAAGGG+AGG - chr1_2:71861662-71861681 None:intergenic 35.0%
TCAATAACAACTACATGCCT+AGG + chr1_2:71861800-71861819 Msa0090030:intron 35.0%
ATCAGAGGAAGAAGAATCAA+GGG + chr1_2:71861824-71861843 Msa0090030:intron 35.0%
! TGATGGTGAATTCGAGAATT+CGG - chr1_2:71861857-71861876 None:intergenic 35.0%
TAGTCAATTGTGGGATATTG+CGG - chr1_2:71861939-71861958 None:intergenic 35.0%
GCAATAAGGTAGTCAATTGT+GGG - chr1_2:71861948-71861967 None:intergenic 35.0%
AGCAATAAGGTAGTCAATTG+TGG - chr1_2:71861949-71861968 None:intergenic 35.0%
! AAATGGCACATCTTTTGTTC+AGG + chr1_2:71862026-71862045 Msa0090030:intron 35.0%
!! CACTTCTCATTCTAAGATCT+TGG + chr1_2:71862085-71862104 Msa0090030:CDS 35.0%
!! TCATTCTAAGATCTTGGGTT+TGG + chr1_2:71862091-71862110 Msa0090030:CDS 35.0%
!! CATTCTAAGATCTTGGGTTT+GGG + chr1_2:71862092-71862111 Msa0090030:CDS 35.0%
TAAATCTGTACTGGAAAAGC+TGG - chr1_2:71862129-71862148 None:intergenic 35.0%
! TTTTCCAGTACAGATTTACC+AGG + chr1_2:71862131-71862150 Msa0090030:CDS 35.0%
!! ATTGAGCGTGATCATTTTTC+AGG + chr1_2:71862233-71862252 Msa0090030:intron 35.0%
!! GCTATTTCTTTACACTGGTT+TGG + chr1_2:71862263-71862282 Msa0090030:CDS 35.0%
! CTTCAAACCCTTTTTAATCC+AGG + chr1_2:71862342-71862361 Msa0090030:intron 35.0%
CCAGAAATCCTGGATTAAAA+AGG - chr1_2:71862353-71862372 None:intergenic 35.0%
! CCTTTTTAATCCAGGATTTC+TGG + chr1_2:71862350-71862369 Msa0090030:intron 35.0%
TGGTCCATTATTGTTTCACA+AGG - chr1_2:71862395-71862414 None:intergenic 35.0%
AATGGACCACAGTTCATTAA+CGG + chr1_2:71862406-71862425 Msa0090030:intron 35.0%
TATTACCCGTTAATGAACTG+TGG - chr1_2:71862415-71862434 None:intergenic 35.0%
AAAGACTGAGAACAGAATCT+AGG - chr1_2:71862449-71862468 None:intergenic 35.0%
CCAAAGCATAAATCAAGATG+TGG - chr1_2:71862539-71862558 None:intergenic 35.0%
CCACATCTTGATTTATGCTT+TGG + chr1_2:71862536-71862555 Msa0090030:intron 35.0%
CATCTTGATTTATGCTTTGG+AGG + chr1_2:71862539-71862558 Msa0090030:intron 35.0%
! TTTTCAGACACTTGATTGAG+TGG - chr1_2:71862700-71862719 None:intergenic 35.0%
CAGACATGCTAATGAAGTTT+GGG - chr1_2:71862772-71862791 None:intergenic 35.0%
TCAGACATGCTAATGAAGTT+TGG - chr1_2:71862773-71862792 None:intergenic 35.0%
!!! ACTGTTTGTTTTTGAGGCTT+TGG + chr1_2:71862823-71862842 Msa0090030:intron 35.0%
TCAATCTAATATGGGATCAC+GGG - chr1_2:71863054-71863073 None:intergenic 35.0%
CTCAATCTAATATGGGATCA+CGG - chr1_2:71863055-71863074 None:intergenic 35.0%
ACAAGAATGACAGTTTAAGC+TGG - chr1_2:71863115-71863134 None:intergenic 35.0%
TGGCAAATAAAGTTACTGTG+CGG + chr1_2:71863200-71863219 Msa0090030:intron 35.0%
AGTCTCACTTGGGAAATAAA+AGG + chr1_2:71863272-71863291 Msa0090030:CDS 35.0%
! TGTACAACTTTTCCTACAGT+GGG + chr1_2:71863408-71863427 Msa0090030:CDS 35.0%
CTTTATACTCGTATTGCGTT+GGG + chr1_2:71863484-71863503 Msa0090030:CDS 35.0%
! ATGACGGAAAAATTATGCGT+GGG - chr1_2:71863575-71863594 None:intergenic 35.0%
TGAATTATAGGCTAAGAGGA+TGG + chr1_2:71863795-71863814 Msa0090030:intron 35.0%
TAAGAGGATGGATGTTGTAT+GGG + chr1_2:71863807-71863826 Msa0090030:CDS 35.0%
! TCCCATACTTTTCATATTGC+AGG + chr1_2:71863870-71863889 Msa0090030:intron 35.0%
TTGCAGGTAACCATACTATA+TGG + chr1_2:71863886-71863905 Msa0090030:intron 35.0%
TGATGTATGTTAGCCACTTA+TGG + chr1_2:71863916-71863935 Msa0090030:intron 35.0%
TTAGCCACTTATGGTATGTT+TGG + chr1_2:71863925-71863944 Msa0090030:intron 35.0%
TAGCCACTTATGGTATGTTT+GGG + chr1_2:71863926-71863945 Msa0090030:intron 35.0%
!! TTTGGGAGTTTGATTTTGGA+GGG + chr1_2:71863943-71863962 Msa0090030:intron 35.0%
! AACATAAGGATGGAGGATTT+TGG - chr1_2:71864110-71864129 None:intergenic 35.0%
! ATCCTCCATCCTTATGTTTT+TGG + chr1_2:71864112-71864131 Msa0090030:intron 35.0%
TTCCAAAAACATAAGGATGG+AGG - chr1_2:71864117-71864136 None:intergenic 35.0%
GTTTGAGCTATGTACAACTT+TGG - chr1_2:71864212-71864231 None:intergenic 35.0%
ACGAATTAAGCACATCCAAA+TGG - chr1_2:71864287-71864306 None:intergenic 35.0%
!! GCATCTTTTGTTGTGAGTAA+CGG + chr1_2:71864387-71864406 Msa0090030:intron 35.0%
!! TTGTGATCCTATATTGGTTC+AGG + chr1_2:71864602-71864621 Msa0090030:intron 35.0%
!! TGTGATCCTATATTGGTTCA+GGG + chr1_2:71864603-71864622 Msa0090030:intron 35.0%
TCAAATCCCTGAACCAATAT+AGG - chr1_2:71864612-71864631 None:intergenic 35.0%
!! TATATTGGTTCAGGGATTTG+AGG + chr1_2:71864611-71864630 Msa0090030:intron 35.0%
ATGATATTAACTCTTCGAGC+AGG + chr1_2:71864811-71864830 Msa0090030:intron 35.0%
! TTCGAGCAGGTAATATTTTG+CGG + chr1_2:71864824-71864843 Msa0090030:intron 35.0%
AAATACAGTTCAGACTCTGT+TGG + chr1_2:71864883-71864902 Msa0090030:CDS 35.0%
! CTGTGACTTAAGCTTTTGAT+AGG + chr1_2:71864969-71864988 Msa0090030:three_prime_UTR 35.0%
! CTTAAGCTTTTGATAGGATC+AGG + chr1_2:71864975-71864994 Msa0090030:three_prime_UTR 35.0%
! ACCTCTATTGTACACTCTTT+TGG + chr1_2:71865135-71865154 Msa0090030:three_prime_UTR 35.0%
! CCTCTATTGTACACTCTTTT+GGG + chr1_2:71865136-71865155 Msa0090030:three_prime_UTR 35.0%
TGAGAAGAGAAGAGAAGAAG+AGG + chr1_2:71861060-71861079 Msa0090030:five_prime_UTR 40.0%
GAAGAGAAGAAGAGGTTCAA+TGG + chr1_2:71861068-71861087 Msa0090030:exon 40.0%
CGTACCTTATCAGCTAAAGA+TGG - chr1_2:71861291-71861310 None:intergenic 40.0%
TCTTTAGCTGATAAGGTACG+AGG + chr1_2:71861291-71861310 Msa0090030:intron 40.0%
! TTCATTCATTTTCGTCCCCA+CGG + chr1_2:71861514-71861533 Msa0090030:intron 40.0%
AAACTTACCTAAAAGCCGTG+GGG - chr1_2:71861532-71861551 None:intergenic 40.0%
GAAACTTACCTAAAAGCCGT+GGG - chr1_2:71861533-71861552 None:intergenic 40.0%
AGAAACTTACCTAAAAGCCG+TGG - chr1_2:71861534-71861553 None:intergenic 40.0%
!! GGCTTTTAGGTAAGTTTCTG+AGG + chr1_2:71861535-71861554 Msa0090030:intron 40.0%
CATCAGAGGAAGAAGAATCA+AGG + chr1_2:71861823-71861842 Msa0090030:intron 40.0%
GAAGAAGAATCAAGGGAACT+TGG + chr1_2:71861831-71861850 Msa0090030:intron 40.0%
AGTACCTGGTAAATCTGTAC+TGG - chr1_2:71862138-71862157 None:intergenic 40.0%
AGTGTAAAGAAATAGCAGCC+AGG - chr1_2:71862259-71862278 None:intergenic 40.0%
!! TGGCTGCTATTTCTTTACAC+TGG + chr1_2:71862258-71862277 Msa0090030:CDS 40.0%
ATGGAAGTGATATTCGTCCA+TGG + chr1_2:71862313-71862332 Msa0090030:CDS 40.0%
ATGGACCACAGTTCATTAAC+GGG + chr1_2:71862407-71862426 Msa0090030:intron 40.0%
! TTAAGCTTTATGATGGAGGG+AGG + chr1_2:71862607-71862626 Msa0090030:intron 40.0%
! TAAGCTTTATGATGGAGGGA+GGG + chr1_2:71862608-71862627 Msa0090030:intron 40.0%
AGTTTGGGAAGAAGGTTTCA+AGG - chr1_2:71862757-71862776 None:intergenic 40.0%
GCTAATGAAGTTTGGGAAGA+AGG - chr1_2:71862765-71862784 None:intergenic 40.0%
!!! GTTTGTTTTTGAGGCTTTGG+TGG + chr1_2:71862826-71862845 Msa0090030:intron 40.0%
GTGAGCAGAATATGGTGTTT+CGG + chr1_2:71862848-71862867 Msa0090030:intron 40.0%
! GTGTTTCGGAACTGTTTTCT+TGG + chr1_2:71862862-71862881 Msa0090030:intron 40.0%
! TTCGGAACTGTTTTCTTGGT+TGG + chr1_2:71862866-71862885 Msa0090030:intron 40.0%
!! GTTTTCTTGGTTGGTGTTTG+AGG + chr1_2:71862875-71862894 Msa0090030:intron 40.0%
CAATCTAATATGGGATCACG+GGG - chr1_2:71863053-71863072 None:intergenic 40.0%
GATTGAGTACAAAGAATGGG+AGG + chr1_2:71863068-71863087 Msa0090030:intron 40.0%
GTCATTCTTGTAAAGCATGC+CGG + chr1_2:71863124-71863143 Msa0090030:intron 40.0%
TCATTCTTGTAAAGCATGCC+GGG + chr1_2:71863125-71863144 Msa0090030:intron 40.0%
TAAAGTTACTGTGCGGTTAC+AGG + chr1_2:71863207-71863226 Msa0090030:intron 40.0%
TCTCAATTATGTGTGCAGAG+AGG + chr1_2:71863385-71863404 Msa0090030:intron 40.0%
! GTGTACAACTTTTCCTACAG+TGG + chr1_2:71863407-71863426 Msa0090030:CDS 40.0%
GCTTTATACTCGTATTGCGT+TGG + chr1_2:71863483-71863502 Msa0090030:CDS 40.0%
!! GATGACGGAAAAATTATGCG+TGG - chr1_2:71863576-71863595 None:intergenic 40.0%
AAACAGACAAAGCAGGATGA+CGG - chr1_2:71863591-71863610 None:intergenic 40.0%
CTAAGAGGATGGATGTTGTA+TGG + chr1_2:71863806-71863825 Msa0090030:CDS 40.0%
AAGAGGATGGATGTTGTATG+GGG + chr1_2:71863808-71863827 Msa0090030:CDS 40.0%
ACTCCCAAACATACCATAAG+TGG - chr1_2:71863932-71863951 None:intergenic 40.0%
!! GTTTGGGAGTTTGATTTTGG+AGG + chr1_2:71863942-71863961 Msa0090030:intron 40.0%
! TAAGGATGGAGGATTTTGGA+GGG - chr1_2:71864106-71864125 None:intergenic 40.0%
! ATAAGGATGGAGGATTTTGG+AGG - chr1_2:71864107-71864126 None:intergenic 40.0%
TGTACATAGCTCAAACTCGA+TGG + chr1_2:71864216-71864235 Msa0090030:intron 40.0%
!! TGGTGCTATTATGAGCCATT+TGG + chr1_2:71864269-71864288 Msa0090030:intron 40.0%
AACCTGAACTTGGAAAAGCT+TGG + chr1_2:71864562-71864581 Msa0090030:intron 40.0%
TTGCTCAGAACTGCATTTGT+TGG + chr1_2:71864651-71864670 Msa0090030:CDS 40.0%
TGCTCAGAACTGCATTTGTT+GGG + chr1_2:71864652-71864671 Msa0090030:CDS 40.0%
! GATTCTGATTCTGGTGATGT+TGG + chr1_2:71864765-71864784 Msa0090030:intron 40.0%
! AATATTTTGCGGTCTCCTGT+TGG + chr1_2:71864835-71864854 Msa0090030:CDS 40.0%
TAATCACTAGACATGCACAG+TGG - chr1_2:71865029-71865048 None:intergenic 40.0%
! CCCAAAAGAGTGTACAATAG+AGG - chr1_2:71865139-71865158 None:intergenic 40.0%
TAAAAAAGATCATGGAGGCG+AGG - chr1_2:71865215-71865234 None:intergenic 40.0%
! CGAGAGGCACGAACATTAAT+TGG - chr1_2:71861573-71861592 None:intergenic 45.0%
TGTTCAGCTCAAGGTCAAAG+AGG + chr1_2:71861599-71861618 Msa0090030:CDS 45.0%
TTCTTCTTCCTCTGATGCCT+AGG - chr1_2:71861820-71861839 None:intergenic 45.0%
TCGAATTCACCATCAGTGAC+AGG + chr1_2:71861862-71861881 Msa0090030:intron 45.0%
TGTTGTGTGTGTGTGTGTGT+GGG - chr1_2:71861978-71861997 None:intergenic 45.0%
!! GAAGTGCTGCTGGAAAAAAC+AGG - chr1_2:71862071-71862090 None:intergenic 45.0%
!! CTTAGAATGAGAAGTGCTGC+TGG - chr1_2:71862081-71862100 None:intergenic 45.0%
! TCTAAGATCTTGGGTTTGGG+AGG + chr1_2:71862095-71862114 Msa0090030:CDS 45.0%
CTAAGATCTTGGGTTTGGGA+GGG + chr1_2:71862096-71862115 Msa0090030:CDS 45.0%
AGGGTTTGAAGACTGTACCA+TGG - chr1_2:71862333-71862352 None:intergenic 45.0%
! TTTATGATGGAGGGAGGGTT+GGG + chr1_2:71862613-71862632 Msa0090030:intron 45.0%
TGGGTGCTCAAGAGCAATTA+TGG + chr1_2:71862632-71862651 Msa0090030:intron 45.0%
!! CTTTGGTGGTGAGCAGAATA+TGG + chr1_2:71862840-71862859 Msa0090030:intron 45.0%
TTGTAAAGCATGCCGGGATA+GGG + chr1_2:71863131-71863150 Msa0090030:intron 45.0%
ACTCACAAGGGCCATTATCA+TGG - chr1_2:71863255-71863274 None:intergenic 45.0%
TTCCCAAGTGAGACTCACAA+GGG - chr1_2:71863267-71863286 None:intergenic 45.0%
TTTCCCAAGTGAGACTCACA+AGG - chr1_2:71863268-71863287 None:intergenic 45.0%
TACTCGTATTGCGTTGGGAA+AGG + chr1_2:71863489-71863508 Msa0090030:CDS 45.0%
GGGTGTTAAACAGACAAAGC+AGG - chr1_2:71863598-71863617 None:intergenic 45.0%
!! AAGGATGGAGGATTTTGGAG+GGG - chr1_2:71864105-71864124 None:intergenic 45.0%
CCAATAGTTTGAGCTATGCG+CGG + chr1_2:71864154-71864173 Msa0090030:intron 45.0%
CAATAGTTTGAGCTATGCGC+GGG + chr1_2:71864155-71864174 Msa0090030:intron 45.0%
TGCGCGGGACTAAAATCATT+TGG + chr1_2:71864170-71864189 Msa0090030:intron 45.0%
TGTGAGTAACGGTAGTTGAG+AGG + chr1_2:71864398-71864417 Msa0090030:intron 45.0%
! GTCCAAGCTTTTCCAAGTTC+AGG - chr1_2:71864567-71864586 None:intergenic 45.0%
! CAGGGATTTGAGGCATATGT+CGG + chr1_2:71864621-71864640 Msa0090030:intron 45.0%
! GCTCAGAACTGCATTTGTTG+GGG + chr1_2:71864653-71864672 Msa0090030:CDS 45.0%
! TGTTGGTTGTCATGGCCATT+GGG + chr1_2:71864852-71864871 Msa0090030:CDS 45.0%
ATTCAGTCTCTGCTTGCTCT+TGG - chr1_2:71864942-71864961 None:intergenic 45.0%
!!! ATAATAATAACTTAAATTTT+AGG - chr1_2:71861735-71861754 None:intergenic 5.0%
GCCAGATGCATCATCGTTGA+TGG + chr1_2:71861396-71861415 Msa0090030:CDS 50.0%
GCCATCAACGATGATGCATC+TGG - chr1_2:71861400-71861419 None:intergenic 50.0%
GATGCTTCTTACCTCCTTCC+TGG + chr1_2:71861420-71861439 Msa0090030:CDS 50.0%
AAGAAACCTTGAGCACGTCC+AGG - chr1_2:71861441-71861460 None:intergenic 50.0%
! TTTTCGTCCCCACGGCTTTT+AGG + chr1_2:71861522-71861541 Msa0090030:intron 50.0%
TAATGTTCGTGCCTCTCGCA+AGG + chr1_2:71861575-71861594 Msa0090030:CDS 50.0%
TCGCAAGGATGTTCAGCTCA+AGG + chr1_2:71861590-71861609 Msa0090030:CDS 50.0%
ACTACATGCCTAGGCATCAG+AGG + chr1_2:71861809-71861828 Msa0090030:intron 50.0%
TTCACCATCAGTGACAGGCA+TGG + chr1_2:71861867-71861886 Msa0090030:intron 50.0%
TTGTGTGTGTGTGTGTGTGG+GGG - chr1_2:71861976-71861995 None:intergenic 50.0%
GTTGTGTGTGTGTGTGTGTG+GGG - chr1_2:71861977-71861996 None:intergenic 50.0%
GTGTTGTGTGTGTGTGTGTG+TGG - chr1_2:71861979-71861998 None:intergenic 50.0%
!!! GCGTGATCATTTTTCAGGCC+TGG + chr1_2:71862238-71862257 Msa0090030:intron 50.0%
! CTTTATGATGGAGGGAGGGT+TGG + chr1_2:71862612-71862631 Msa0090030:intron 50.0%
CTTGTAAAGCATGCCGGGAT+AGG + chr1_2:71863130-71863149 Msa0090030:intron 50.0%
TGTAAAGCATGCCGGGATAG+GGG + chr1_2:71863132-71863151 Msa0090030:intron 50.0%
AGTTACTGTGCGGTTACAGG+TGG + chr1_2:71863210-71863229 Msa0090030:intron 50.0%
ACCAGACTGCGCAAAAAAGC+AGG + chr1_2:71863298-71863317 Msa0090030:CDS 50.0%
!!! ACCTGCTTTTTTGCGCAGTC+TGG - chr1_2:71863302-71863321 None:intergenic 50.0%
CTTGCATCATAGCCCACTGT+AGG - chr1_2:71863423-71863442 None:intergenic 50.0%
!! CTACAGTGGGCTATGATGCA+AGG + chr1_2:71863421-71863440 Msa0090030:CDS 50.0%
GTTGTATGGGGAGAAACAGC+TGG + chr1_2:71863820-71863839 Msa0090030:CDS 50.0%
!! ATGGAGGATTTTGGAGGGGA+GGG - chr1_2:71864101-71864120 None:intergenic 50.0%
CCGCGCATAGCTCAAACTAT+TGG - chr1_2:71864157-71864176 None:intergenic 50.0%
! CAGAACTGCATTTGTTGGGG+TGG + chr1_2:71864656-71864675 Msa0090030:CDS 50.0%
TTGTTGGGGTGGCTTCTGAA+TGG + chr1_2:71864667-71864686 Msa0090030:CDS 50.0%
CAATGGCCATGACAACCAAC+AGG - chr1_2:71864853-71864872 None:intergenic 50.0%
! CTGTTGGTTGTCATGGCCAT+TGG + chr1_2:71864851-71864870 Msa0090030:CDS 50.0%
TTGGGTCGCCATACTTGTTC+CGG + chr1_2:71865154-71865173 Msa0090030:three_prime_UTR 50.0%
CTACGTCACCGGAACAAGTA+TGG - chr1_2:71865165-71865184 None:intergenic 50.0%
TCATCATCCTGCTACGTCAC+CGG - chr1_2:71865176-71865195 None:intergenic 50.0%
AACCTTGAGCACGTCCAGGA+AGG - chr1_2:71861437-71861456 None:intergenic 55.0%
GAGCTGAACATCCTTGCGAG+AGG - chr1_2:71861589-71861608 None:intergenic 55.0%
GTGACCATGCCTGTCACTGA+TGG - chr1_2:71861874-71861893 None:intergenic 55.0%
!! GTGTGGGGGCATCAGCAATA+AGG - chr1_2:71861962-71861981 None:intergenic 55.0%
GTAAAGCATGCCGGGATAGG+GGG + chr1_2:71863133-71863152 Msa0090030:intron 55.0%
TGGCCCTTGTGAGTCTCACT+TGG + chr1_2:71863261-71863280 Msa0090030:CDS 55.0%
GGCCCTTGTGAGTCTCACTT+GGG + chr1_2:71863262-71863281 Msa0090030:CDS 55.0%
ATGGGGAGAAACAGCTGGTG+TGG + chr1_2:71863825-71863844 Msa0090030:intron 55.0%
GGAGAAACAGCTGGTGTGGA+TGG + chr1_2:71863829-71863848 Msa0090030:intron 55.0%
TGGGACACAGCAACCACAGT+TGG - chr1_2:71863855-71863874 None:intergenic 55.0%
!! GATGGAGGATTTTGGAGGGG+AGG - chr1_2:71864102-71864121 None:intergenic 55.0%
! CGGTCTCCTGTTGGTTGTCA+TGG + chr1_2:71864844-71864863 Msa0090030:CDS 55.0%
ACTTGTTCCGGTGACGTAGC+AGG + chr1_2:71865166-71865185 Msa0090030:three_prime_UTR 55.0%
! ACAAGGGCACGCTGACGAAG+TGG - chr1_2:71861201-71861220 None:intergenic 60.0%
CTTGAGCACGTCCAGGAAGG+AGG - chr1_2:71861434-71861453 None:intergenic 60.0%
CTCCTTCCTGGACGTGCTCA+AGG + chr1_2:71861432-71861451 Msa0090030:CDS 60.0%
CTGGTGTGGATGGCCAACTG+TGG + chr1_2:71863839-71863858 Msa0090030:intron 60.0%
TGGGGTGGCTTCTGAATGGC+AGG + chr1_2:71864671-71864690 Msa0090030:CDS 60.0%
ATGCCGGGATAGGGGGAGAG+CGG + chr1_2:71863140-71863159 Msa0090030:intron 65.0%
TCTCCGCTCTCCCCCTATCC+CGG - chr1_2:71863146-71863165 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 71860991 71865309 71860991 ID=Msa0090030;Name=Msa0090030
chr1_2 mRNA 71860991 71865309 71860991 ID=Msa0090030-mRNA-1;Parent=Msa0090030;Name=Msa0090030-mRNA-1;_AED=0.11;_eAED=0.11;_QI=96|0.88|0.9|1|0.88|0.9|10|345|338
chr1_2 exon 71860991 71861305 71860991 ID=Msa0090030-mRNA-1:exon:24784;Parent=Msa0090030-mRNA-1
chr1_2 exon 71861375 71861453 71861375 ID=Msa0090030-mRNA-1:exon:24785;Parent=Msa0090030-mRNA-1
chr1_2 exon 71861544 71861638 71861544 ID=Msa0090030-mRNA-1:exon:24786;Parent=Msa0090030-mRNA-1
chr1_2 exon 71862048 71862152 71862048 ID=Msa0090030-mRNA-1:exon:24787;Parent=Msa0090030-mRNA-1
chr1_2 exon 71862255 71862334 71862255 ID=Msa0090030-mRNA-1:exon:24788;Parent=Msa0090030-mRNA-1
chr1_2 exon 71863229 71863319 71863229 ID=Msa0090030-mRNA-1:exon:24789;Parent=Msa0090030-mRNA-1
chr1_2 exon 71863403 71863510 71863403 ID=Msa0090030-mRNA-1:exon:24790;Parent=Msa0090030-mRNA-1
chr1_2 exon 71863805 71863843 71863805 ID=Msa0090030-mRNA-1:exon:24791;Parent=Msa0090030-mRNA-1
chr1_2 exon 71864624 71864692 71864624 ID=Msa0090030-mRNA-1:exon:24792;Parent=Msa0090030-mRNA-1
chr1_2 exon 71864833 71865309 71864833 ID=Msa0090030-mRNA-1:exon:24793;Parent=Msa0090030-mRNA-1
chr1_2 five_prime_UTR 71860991 71861086 71860991 ID=Msa0090030-mRNA-1:five_prime_utr;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71861087 71861305 71861087 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71861375 71861453 71861375 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71861544 71861638 71861544 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71862048 71862152 71862048 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71862255 71862334 71862255 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71863229 71863319 71863229 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71863403 71863510 71863403 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71863805 71863843 71863805 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71864624 71864692 71864624 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 CDS 71864833 71864964 71864833 ID=Msa0090030-mRNA-1:cds;Parent=Msa0090030-mRNA-1
chr1_2 three_prime_UTR 71864965 71865309 71864965 ID=Msa0090030-mRNA-1:three_prime_utr;Parent=Msa0090030-mRNA-1
Gene Sequence

>Msa0090030

ATGGAAGAATCAAAGGAGATAGAAGAATCAGTTGTAAGCGTATTAGAAGAAGCTAAAGAGATTCAGGATTCAGTTTCCGTTCACATCTCAAAGACATTAAGCGATGAACAACCACTTCGTCAGCGTGCCCTTGTTCTCGATTCTAAAATCATTTCTCTTCGTTCTTCTCTTTATTCTCTTCTTTCTAATAAACTCATTCAACCATCTTTAGCTGATAAGTTAGATGAAGATTTGCAAAGAGCCAGATGCATCATCGTTGATGGCGATGCTTCTTACCTCCTTCCTGGACGTGCTCAAGGTAAGTTTCTGAGGATGTTTTTGGGTCCAATTAATGTTCGTGCCTCTCGCAAGGATGTTCAGCTCAAGGTCAAAGAGGAATACAACAGTTACAGGGATAGAACTGCTCTGCTATTCCTGTTTTTTCCAGCAGCACTTCTCATTCTAAGATCTTGGGTTTGGGAGGGTTGTTTGCCAGCTTTTCCAGTACAGATTTACCAGGCCTGGCTGCTATTTCTTTACACTGGTTTGGCGTTGCGAGAGAACATATTGAGAGTAAATGGAAGTGATATTCGTCCATGGTGGATATATCATCATTATTGTGCCATGATAATGGCCCTTGTGAGTCTCACTTGGGAAATAAAAGGACAACCAGACTGCGCAAAAAAGCAGAGAGGTGTACAACTTTTCCTACAGTGGGCTATGATGCAAGGAGTTGCAATGCTTTTGCAAAATAGATATCAACGGCAAAGGCTTTATACTCGTATTGCGTTGGGAAAGGCTAAGAGGATGGATGTTGTATGGGGAGAAACAGCTGGTGGATTTGAGGCATATGTCGGACTATTGTTGCTCAGAACTGCATTTGTTGGGGTGGCTTCTGAATGGCAGGTAATATTTTGCGGTCTCCTGTTGGTTGTCATGGCCATTGGGAACTTTCAAAATACAGTTCAGACTCTGTTGGTAAAGTCAAGATTTAAGGCGAAGATGAAAAGAACCAAGAGCAAGCAGAGACTGAATTAG

Protein sequence

>Msa0090030

MEESKEIEESVVSVLEEAKEIQDSVSVHISKTLSDEQPLRQRALVLDSKIISLRSSLYSLLSNKLIQPSLADKLDEDLQRARCIIVDGDASYLLPGRAQGKFLRMFLGPINVRASRKDVQLKVKEEYNSYRDRTALLFLFFPAALLILRSWVWEGCLPAFPVQIYQAWLLFLYTGLALRENILRVNGSDIRPWWIYHHYCAMIMALVSLTWEIKGQPDCAKKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGGFEAYVGLLLLRTAFVGVASEWQVIFCGLLLVVMAIGNFQNTVQTLLVKSRFKAKMKRTKSKQRLN*