Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140400 | XP_003603158.1 | 98.171 | 328 | 2 | 3 | 1 | 326 | 1 | 326 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140400 | sp|Q9FM86|ADT5_ARATH | 75.915 | 328 | 73 | 3 | 1 | 324 | 3 | 328 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140400 | G7J7N8 | 98.171 | 328 | 2 | 3 | 1 | 326 | 1 | 326 | 0.0 | 650 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0140400 | -0.821932 | 3.104103e-53 | -8.615850e-47 |
| Msa0004060 | Msa0140400 | 0.801302 | 9.601296e-49 | -8.615850e-47 |
| Msa0005000 | Msa0140400 | -0.809748 | 1.623370e-50 | -8.615850e-47 |
| Msa0006880 | Msa0140400 | 0.814428 | 1.548340e-51 | -8.615850e-47 |
| Msa0008840 | Msa0140400 | 0.811790 | 5.869127e-51 | -8.615850e-47 |
| Msa0010770 | Msa0140400 | 0.821468 | 3.972953e-53 | -8.615850e-47 |
| Msa0026660 | Msa0140400 | 0.823830 | 1.121407e-53 | -8.615850e-47 |
| Msa0027580 | Msa0140400 | 0.802536 | 5.354994e-49 | -8.615850e-47 |
| Msa0036370 | Msa0140400 | 0.821709 | 3.495626e-53 | -8.615850e-47 |
| Msa0047250 | Msa0140400 | 0.806527 | 7.876678e-50 | -8.615850e-47 |
| Msa0053050 | Msa0140400 | -0.804982 | 1.663142e-49 | -8.615850e-47 |
| Msa0055100 | Msa0140400 | 0.801720 | 7.881824e-49 | -8.615850e-47 |
| Msa0055150 | Msa0140400 | 0.809418 | 1.911172e-50 | -8.615850e-47 |
| Msa0065010 | Msa0140400 | 0.809880 | 1.520477e-50 | -8.615850e-47 |
| Msa0072170 | Msa0140400 | 0.826528 | 2.582590e-54 | -8.615850e-47 |
| Msa0075340 | Msa0140400 | 0.803827 | 2.894784e-49 | -8.615850e-47 |
| Msa0085720 | Msa0140400 | 0.823064 | 1.693873e-53 | -8.615850e-47 |
| Msa0090030 | Msa0140400 | 0.853403 | 2.444972e-61 | -8.615850e-47 |
| Msa0092170 | Msa0140400 | 0.833215 | 6.060566e-56 | -8.615850e-47 |
| Msa0094010 | Msa0140400 | 0.815977 | 7.010603e-52 | -8.615850e-47 |
| Msa0097950 | Msa0140400 | 0.802394 | 5.729131e-49 | -8.615850e-47 |
| Msa0098390 | Msa0140400 | -0.813274 | 2.780621e-51 | -8.615850e-47 |
| Msa0100800 | Msa0140400 | 0.821421 | 4.075040e-53 | -8.615850e-47 |
| Msa0101180 | Msa0140400 | 0.807406 | 5.133188e-50 | -8.615850e-47 |
| Msa0108870 | Msa0140400 | 0.816331 | 5.843493e-52 | -8.615850e-47 |
| Msa0119320 | Msa0140400 | 0.804549 | 2.048369e-49 | -8.615850e-47 |
| Msa0120540 | Msa0140400 | 0.825467 | 4.613607e-54 | -8.615850e-47 |
| Msa0126910 | Msa0140400 | 0.808508 | 2.992678e-50 | -8.615850e-47 |
| Msa0127040 | Msa0140400 | 0.818467 | 1.930668e-52 | -8.615850e-47 |
| Msa0131450 | Msa0140400 | 0.833657 | 4.701093e-56 | -8.615850e-47 |
| Msa0138210 | Msa0140400 | 0.800545 | 1.370737e-48 | -8.615850e-47 |
| Msa0140170 | Msa0140400 | 0.814244 | 1.700440e-51 | -8.615850e-47 |
| Msa0140400 | Msa0140520 | -0.827693 | 1.359092e-54 | -8.615850e-47 |
| Msa0140400 | Msa0145110 | 0.805490 | 1.302095e-49 | -8.615850e-47 |
| Msa0140400 | Msa0145150 | 0.832941 | 7.092142e-56 | -8.615850e-47 |
| Msa0140400 | Msa0154920 | 0.802976 | 4.345330e-49 | -8.615850e-47 |
| Msa0140400 | Msa0166750 | 0.805035 | 1.621313e-49 | -8.615850e-47 |
| Msa0140400 | Msa0173330 | 0.807308 | 5.385999e-50 | -8.615850e-47 |
| Msa0140400 | Msa0175200 | 0.825084 | 5.683296e-54 | -8.615850e-47 |
| Msa0140400 | Msa0176330 | 0.811723 | 6.071437e-51 | -8.615850e-47 |
| Msa0140400 | Msa0177230 | 0.816630 | 5.008400e-52 | -8.615850e-47 |
| Msa0140400 | Msa0177270 | 0.808976 | 2.377081e-50 | -8.615850e-47 |
| Msa0140400 | Msa0182280 | 0.816991 | 4.157457e-52 | -8.615850e-47 |
| Msa0140400 | Msa0183420 | 0.802871 | 4.566912e-49 | -8.615850e-47 |
| Msa0140400 | Msa0183460 | 0.815043 | 1.131781e-51 | -8.615850e-47 |
| Msa0140400 | Msa0183870 | 0.803788 | 2.949340e-49 | -8.615850e-47 |
| Msa0140400 | Msa0193540 | 0.807687 | 4.474816e-50 | -8.615850e-47 |
| Msa0140400 | Msa0193600 | 0.808473 | 3.044003e-50 | -8.615850e-47 |
| Msa0140400 | Msa0198940 | 0.817356 | 3.440474e-52 | -8.615850e-47 |
| Msa0140400 | Msa0208810 | 0.825601 | 4.289551e-54 | -8.615850e-47 |
| Msa0140400 | Msa0211650 | 0.817140 | 3.848185e-52 | -8.615850e-47 |
| Msa0140400 | Msa0212750 | -0.832273 | 1.038377e-55 | -8.615850e-47 |
| Msa0140400 | Msa0227230 | 0.802510 | 5.422649e-49 | -8.615850e-47 |
| Msa0140400 | Msa0227310 | -0.806078 | 9.795589e-50 | -8.615850e-47 |
| Msa0140400 | Msa0229940 | 0.803119 | 4.058208e-49 | -8.615850e-47 |
| Msa0140400 | Msa0235470 | 0.802126 | 6.502813e-49 | -8.615850e-47 |
| Msa0140400 | Msa0239940 | 0.837397 | 5.325760e-57 | -8.615850e-47 |
| Msa0140400 | Msa0241740 | 0.833431 | 5.355291e-56 | -8.615850e-47 |
| Msa0140400 | Msa0252240 | 0.829031 | 6.463391e-55 | -8.615850e-47 |
| Msa0140400 | Msa0266210 | 0.823100 | 1.661049e-53 | -8.615850e-47 |
| Msa0140400 | Msa0267870 | 0.809102 | 2.233966e-50 | -8.615850e-47 |
| Msa0140400 | Msa0273650 | 0.810041 | 1.403668e-50 | -8.615850e-47 |
| Msa0140400 | Msa0274630 | 0.805605 | 1.231217e-49 | -8.615850e-47 |
| Msa0140400 | Msa0281480 | 0.809965 | 1.457987e-50 | -8.615850e-47 |
| Msa0140400 | Msa0287670 | 0.825771 | 3.907567e-54 | -8.615850e-47 |
| Msa0140400 | Msa0288730 | 0.803734 | 3.026698e-49 | -8.615850e-47 |
| Msa0140400 | Msa0289400 | 0.810322 | 1.221009e-50 | -8.615850e-47 |
| Msa0140400 | Msa0291520 | 0.806452 | 8.171152e-50 | -8.615850e-47 |
| Msa0140400 | Msa0295000 | -0.811449 | 6.961495e-51 | -8.615850e-47 |
| Msa0140400 | Msa0304840 | 0.811432 | 7.023153e-51 | -8.615850e-47 |
| Msa0140400 | Msa0308200 | 0.839435 | 1.587761e-57 | -8.615850e-47 |
| Msa0140400 | Msa0308220 | 0.835979 | 1.224295e-56 | -8.615850e-47 |
| Msa0140400 | Msa0313930 | 0.823026 | 1.728247e-53 | -8.615850e-47 |
| Msa0140400 | Msa0320610 | 0.830839 | 2.342796e-55 | -8.615850e-47 |
| Msa0140400 | Msa0328210 | 0.800515 | 1.390156e-48 | -8.615850e-47 |
| Msa0140400 | Msa0343190 | 0.824340 | 8.511880e-54 | -8.615850e-47 |
| Msa0140400 | Msa0363170 | 0.802790 | 4.745320e-49 | -8.615850e-47 |
| Msa0140400 | Msa0381000 | 0.839345 | 1.674954e-57 | -8.615850e-47 |
| Msa0140400 | Msa0381080 | 0.822718 | 2.039329e-53 | -8.615850e-47 |
| Msa0140400 | Msa0381700 | 0.837097 | 6.354497e-57 | -8.615850e-47 |
| Msa0140400 | Msa0384670 | 0.805860 | 1.088693e-49 | -8.615850e-47 |
| Msa0140400 | Msa0384880 | 0.815432 | 9.274339e-52 | -8.615850e-47 |
| Msa0140400 | Msa0387910 | 0.817627 | 2.989599e-52 | -8.615850e-47 |
| Msa0140400 | Msa0404700 | 0.808524 | 2.969523e-50 | -8.615850e-47 |
| Msa0140400 | Msa0410300 | 0.804216 | 2.402509e-49 | -8.615850e-47 |
| Msa0140400 | Msa0417650 | 0.800109 | 1.681200e-48 | -8.615850e-47 |
| Msa0140400 | Msa0423270 | 0.804090 | 2.552118e-49 | -8.615850e-47 |
| Msa0140400 | Msa0430870 | 0.814225 | 1.716856e-51 | -8.615850e-47 |
| Msa0140400 | Msa0436190 | 0.833345 | 5.625190e-56 | -8.615850e-47 |
| Msa0140400 | Msa0436200 | 0.805385 | 1.369489e-49 | -8.615850e-47 |
| Msa0140400 | Msa0439890 | 0.830043 | 3.667629e-55 | -8.615850e-47 |
| Msa0140400 | Msa0442310 | 0.816729 | 4.759214e-52 | -8.615850e-47 |
| Msa0140400 | Msa0443430 | 0.816480 | 5.412681e-52 | -8.615850e-47 |
| Msa0140400 | Msa0461590 | 0.816016 | 6.872708e-52 | -8.615850e-47 |
| Msa0140400 | Msa0462540 | 0.812295 | 4.554661e-51 | -8.615850e-47 |
| Msa0140400 | Msa0469350 | 0.801492 | 8.777600e-49 | -8.615850e-47 |
| Msa0140400 | Msa0474700 | 0.820709 | 5.943786e-53 | -8.615850e-47 |
| Msa0140400 | Msa0482180 | 0.814017 | 1.908100e-51 | -8.615850e-47 |
| Msa0140400 | Msa0505060 | 0.814555 | 1.451756e-51 | -8.615850e-47 |
| Msa0140400 | Msa0519390 | 0.808517 | 2.978768e-50 | -8.615850e-47 |
| Msa0140400 | Msa0520140 | 0.932183 | 1.248003e-94 | -8.615850e-47 |
| Msa0140400 | Msa0524590 | 0.806277 | 8.895789e-50 | -8.615850e-47 |
| Msa0140400 | Msa0524600 | 0.831531 | 1.583110e-55 | -8.615850e-47 |
| Msa0140400 | Msa0527910 | 0.853183 | 2.827941e-61 | -8.615850e-47 |
| Msa0140400 | Msa0534410 | 0.834162 | 3.515163e-56 | -8.615850e-47 |
| Msa0140400 | Msa0537770 | 0.819101 | 1.386058e-52 | -8.615850e-47 |
| Msa0140400 | Msa0550570 | 0.823346 | 1.455043e-53 | -8.615850e-47 |
| Msa0140400 | Msa0557950 | -0.805080 | 1.586288e-49 | -8.615850e-47 |
| Msa0140400 | Msa0565620 | -0.805503 | 1.293413e-49 | -8.615850e-47 |
| Msa0140400 | Msa0573040 | 0.812002 | 5.277291e-51 | -8.615850e-47 |
| Msa0140400 | Msa0578090 | 0.820951 | 5.227163e-53 | -8.615850e-47 |
| Msa0140400 | Msa0579370 | 0.805852 | 1.092972e-49 | -8.615850e-47 |
| Msa0140400 | Msa0586850 | 0.819724 | 9.995553e-53 | -8.615850e-47 |
| Msa0140400 | Msa0590650 | 0.827147 | 1.836996e-54 | -8.615850e-47 |
| Msa0140400 | Msa0609970 | 0.830591 | 2.694745e-55 | -8.615850e-47 |
| Msa0140400 | Msa0610500 | 0.800731 | 1.255853e-48 | -8.615850e-47 |
| Msa0140400 | Msa0614990 | 0.810697 | 1.013480e-50 | -8.615850e-47 |
| Msa0140400 | Msa0617260 | 0.810055 | 1.394034e-50 | -8.615850e-47 |
| Msa0140400 | Msa0618200 | -0.815670 | 8.208939e-52 | -8.615850e-47 |
| Msa0140400 | Msa0619920 | 0.843139 | 1.683994e-58 | -8.615850e-47 |
| Msa0140400 | Msa0620330 | 0.827325 | 1.665279e-54 | -8.615850e-47 |
| Msa0140400 | Msa0626680 | 0.802342 | 5.871656e-49 | -8.615850e-47 |
| Msa0140400 | Msa0626940 | 0.820287 | 7.428483e-53 | -8.615850e-47 |
| Msa0140400 | Msa0628290 | 0.840038 | 1.106291e-57 | -8.615850e-47 |
| Msa0140400 | Msa0630950 | 0.819713 | 1.005288e-52 | -8.615850e-47 |
| Msa0140400 | Msa0650620 | 0.812850 | 3.445294e-51 | -8.615850e-47 |
| Msa0140400 | Msa0651150 | 0.814174 | 1.762530e-51 | -8.615850e-47 |
| Msa0140400 | Msa0652300 | 0.820403 | 6.987654e-53 | -8.615850e-47 |
| Msa0140400 | Msa0652760 | 0.825756 | 3.939724e-54 | -8.615850e-47 |
| Msa0140400 | Msa0653320 | -0.815019 | 1.145706e-51 | -8.615850e-47 |
| Msa0140400 | Msa0659140 | 0.809845 | 1.546680e-50 | -8.615850e-47 |
| Msa0140400 | Msa0659990 | 0.814663 | 1.373430e-51 | -8.615850e-47 |
| Msa0140400 | Msa0664760 | 0.810064 | 1.387609e-50 | -8.615850e-47 |
| Msa0140400 | Msa0669190 | 0.806841 | 6.763437e-50 | -8.615850e-47 |
| Msa0140400 | Msa0679550 | 0.805871 | 1.082547e-49 | -8.615850e-47 |
| Msa0140400 | Msa0687230 | 0.825463 | 4.623122e-54 | -8.615850e-47 |
| Msa0140400 | Msa0693790 | 0.824370 | 8.373707e-54 | -8.615850e-47 |
| Msa0140400 | Msa0705600 | 0.807768 | 4.302294e-50 | -8.615850e-47 |
| Msa0140400 | Msa0706390 | 0.825754 | 3.944352e-54 | -8.615850e-47 |
| Msa0140400 | Msa0707390 | 0.806248 | 9.021667e-50 | -8.615850e-47 |
| Msa0140400 | Msa0715150 | 0.802374 | 5.782732e-49 | -8.615850e-47 |
| Msa0140400 | Msa0726080 | 0.806224 | 9.126979e-50 | -8.615850e-47 |
| Msa0140400 | Msa0736570 | 0.810823 | 9.514996e-51 | -8.615850e-47 |
| Msa0140400 | Msa0747720 | -0.805595 | 1.237226e-49 | -8.615850e-47 |
| Msa0140400 | Msa0756930 | 0.839833 | 1.251056e-57 | -8.615850e-47 |
| Msa0140400 | Msa0758230 | 0.821464 | 3.983061e-53 | -8.615850e-47 |
| Msa0140400 | Msa0774750 | 0.807172 | 5.756410e-50 | -8.615850e-47 |
| Msa0140400 | Msa0781710 | 0.804341 | 2.263216e-49 | -8.615850e-47 |
| Msa0140400 | Msa0799010 | -0.816442 | 5.519138e-52 | -8.615850e-47 |
| Msa0140400 | Msa0814250 | 0.802388 | 5.744529e-49 | -8.615850e-47 |
| Msa0140400 | Msa0817260 | 0.820041 | 8.455729e-53 | -8.615850e-47 |
| Msa0140400 | Msa0818770 | 0.808927 | 2.435319e-50 | -8.615850e-47 |
| Msa0140400 | Msa0820530 | -0.832339 | 1.000327e-55 | -8.615850e-47 |
| Msa0140400 | Msa0822170 | 0.815744 | 7.901829e-52 | -8.615850e-47 |
| Msa0140400 | Msa0824730 | 0.804063 | 2.586213e-49 | -8.615850e-47 |
| Msa0140400 | Msa0829190 | 0.801065 | 1.073421e-48 | -8.615850e-47 |
| Msa0140400 | Msa0836500 | 0.833593 | 4.877977e-56 | -8.615850e-47 |
| Msa0140400 | Msa0846230 | 0.805002 | 1.647083e-49 | -8.615850e-47 |
| Msa0140400 | Msa0879860 | 0.844946 | 5.516438e-59 | -8.615850e-47 |
| Msa0140400 | Msa0888940 | 0.805001 | 1.648082e-49 | -8.615850e-47 |
| Msa0140400 | Msa0924150 | -0.832772 | 7.811052e-56 | -8.615850e-47 |
| Msa0140400 | Msa0943270 | 0.803187 | 3.928991e-49 | -8.615850e-47 |
| Msa0140400 | Msa0945100 | 0.834433 | 3.006075e-56 | -8.615850e-47 |
| Msa0140400 | Msa0981430 | 0.819104 | 1.383517e-52 | -8.615850e-47 |
| Msa0140400 | Msa0993240 | 0.803705 | 3.068431e-49 | -8.615850e-47 |
| Msa0140400 | Msa1002600 | -0.829277 | 5.632388e-55 | -8.615850e-47 |
| Msa0140400 | Msa1010460 | 0.802891 | 4.523346e-49 | -8.615850e-47 |
| Msa0140400 | Msa1025940 | 0.802014 | 6.857053e-49 | -8.615850e-47 |
| Msa0140400 | Msa1036740 | 0.817454 | 3.269624e-52 | -8.615850e-47 |
| Msa0140400 | Msa1036910 | 0.801070 | 1.070878e-48 | -8.615850e-47 |
| Msa0140400 | Msa1038210 | -0.811008 | 8.676066e-51 | -8.615850e-47 |
| Msa0140400 | Msa1050700 | 0.808193 | 3.493351e-50 | -8.615850e-47 |
| Msa0140400 | Msa1070390 | 0.807374 | 5.215922e-50 | -8.615850e-47 |
| Msa0140400 | Msa1073400 | 0.804690 | 1.914145e-49 | -8.615850e-47 |
| Msa0140400 | Msa1073830 | 0.808170 | 3.533154e-50 | -8.615850e-47 |
| Msa0140400 | Msa1093330 | 0.810456 | 1.142554e-50 | -8.615850e-47 |
| Msa0140400 | Msa1096550 | 0.841292 | 5.190376e-58 | -8.615850e-47 |
| Msa0140400 | Msa1113590 | 0.842183 | 3.021962e-58 | -8.615850e-47 |
| Msa0140400 | Msa1113880 | 0.818886 | 1.550704e-52 | -8.615850e-47 |
| Msa0140400 | Msa1114040 | 0.810558 | 1.086036e-50 | -8.615850e-47 |
| Msa0140400 | Msa1122780 | 0.800239 | 1.582282e-48 | -8.615850e-47 |
| Msa0140400 | Msa1126120 | -0.803682 | 3.102325e-49 | -8.615850e-47 |
| Msa0140400 | Msa1128330 | 0.819182 | 1.328044e-52 | -8.615850e-47 |
| Msa0140400 | Msa1130530 | 0.803250 | 3.812665e-49 | -8.615850e-47 |
| Msa0140400 | Msa1133570 | 0.805148 | 1.535148e-49 | -8.615850e-47 |
| Msa0140400 | Msa1135800 | -0.810896 | 9.174824e-51 | -8.615850e-47 |
| Msa0140400 | Msa1135810 | -0.810297 | 1.236383e-50 | -8.615850e-47 |
| Msa0140400 | Msa1144970 | 0.801517 | 8.673875e-49 | -8.615850e-47 |
| Msa0140400 | Msa1158230 | 0.802739 | 4.863279e-49 | -8.615850e-47 |
| Msa0140400 | Msa1158770 | 0.804357 | 2.245481e-49 | -8.615850e-47 |
| Msa0140400 | Msa1160360 | 0.807799 | 4.236004e-50 | -8.615850e-47 |
| Msa0140400 | Msa1163870 | 0.804676 | 1.926933e-49 | -8.615850e-47 |
| Msa0140400 | Msa1164020 | 0.833500 | 5.146388e-56 | -8.615850e-47 |
| Msa0140400 | Msa1172130 | -0.819599 | 1.067055e-52 | -8.615850e-47 |
| Msa0140400 | Msa1173900 | 0.814977 | 1.170062e-51 | -8.615850e-47 |
| Msa0140400 | Msa1174310 | 0.814078 | 1.850392e-51 | -8.615850e-47 |
| Msa0140400 | Msa1178050 | 0.805446 | 1.329538e-49 | -8.615850e-47 |
| Msa0140400 | Msa1178370 | 0.805440 | 1.333344e-49 | -8.615850e-47 |
| Msa0140400 | Msa1182640 | 0.802979 | 4.337523e-49 | -8.615850e-47 |
| Msa0140400 | Msa1198880 | 0.802745 | 4.849614e-49 | -8.615850e-47 |
| Msa0140400 | Msa1199710 | 0.823259 | 1.524879e-53 | -8.615850e-47 |
| Msa0140400 | Msa1200320 | 0.804449 | 2.148596e-49 | -8.615850e-47 |
| Msa0140400 | Msa1201830 | 0.804510 | 2.086384e-49 | -8.615850e-47 |
| Msa0140400 | Msa1207730 | 0.800349 | 1.502454e-48 | -8.615850e-47 |
| Msa0140400 | Msa1211830 | 0.815166 | 1.062569e-51 | -8.615850e-47 |
| Msa0140400 | Msa1226610 | 0.800348 | 1.503024e-48 | -8.615850e-47 |
| Msa0140400 | Msa1229850 | 0.810963 | 8.874499e-51 | -8.615850e-47 |
| Msa0140400 | Msa1236070 | -0.812779 | 3.570026e-51 | -8.615850e-47 |
| Msa0140400 | Msa1253810 | 0.831744 | 1.403592e-55 | -8.615850e-47 |
| Msa0140400 | Msa1258370 | 0.822405 | 2.410498e-53 | -8.615850e-47 |
| Msa0140400 | Msa1270660 | 0.803901 | 2.793592e-49 | -8.615850e-47 |
| Msa0140400 | Msa1280620 | 0.815647 | 8.305950e-52 | -8.615850e-47 |
| Msa0140400 | Msa1294960 | 0.838457 | 2.843608e-57 | -8.615850e-47 |
| Msa0140400 | Msa1296300 | 0.815301 | 9.916757e-52 | -8.615850e-47 |
| Msa0140400 | Msa1299700 | 0.821729 | 3.458314e-53 | -8.615850e-47 |
| Msa0140400 | Msa1310660 | 0.830118 | 3.515195e-55 | -8.615850e-47 |
| Msa0140400 | Msa1314770 | 0.806158 | 9.421452e-50 | -8.615850e-47 |
| Msa0140400 | Msa1317270 | 0.802847 | 4.620242e-49 | -8.615850e-47 |
| Msa0140400 | Msa1330890 | -0.814134 | 1.797859e-51 | -8.615850e-47 |
| Msa0140400 | Msa1340040 | -0.803292 | 3.737865e-49 | -8.615850e-47 |
| Msa0140400 | Msa1340830 | 0.823577 | 1.285421e-53 | -8.615850e-47 |
| Msa0140400 | Msa1350690 | 0.825608 | 4.273088e-54 | -8.615850e-47 |
| Msa0140400 | Msa1360280 | 0.809998 | 1.433893e-50 | -8.615850e-47 |
| Msa0140400 | Msa1363700 | 0.860718 | 1.698562e-63 | -8.615850e-47 |
| Msa0140400 | Msa1365860 | 0.837960 | 3.818613e-57 | -8.615850e-47 |
| Msa0140400 | Msa1369490 | 0.818140 | 2.290079e-52 | -8.615850e-47 |
| Msa0140400 | Msa1371090 | 0.832387 | 9.733960e-56 | -8.615850e-47 |
| Msa0140400 | Msa1383350 | 0.848421 | 6.196314e-60 | -8.615850e-47 |
| Msa0140400 | Msa1393800 | 0.833039 | 6.704210e-56 | -8.615850e-47 |
| Msa0140400 | Msa1396940 | 0.822474 | 2.323905e-53 | -8.615850e-47 |
| Msa0140400 | Msa1407970 | 0.807243 | 5.560237e-50 | -8.615850e-47 |
| Msa0140400 | Msa1422840 | 0.817115 | 3.897449e-52 | -8.615850e-47 |
| Msa0140400 | Msa1426570 | 0.804764 | 1.846971e-49 | -8.615850e-47 |
| Msa0140400 | Msa1426920 | 0.850347 | 1.801362e-60 | -8.615850e-47 |
| Msa0140400 | Msa1433600 | 0.815297 | 9.936925e-52 | -8.615850e-47 |
| Msa0140400 | Msa1438450 | 0.801584 | 8.404802e-49 | -8.615850e-47 |
| Msa0140400 | Msa1445220 | 0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0140400 | Msa1458030 | 0.849163 | 3.857787e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140400 | MtrunA17_Chr3g0135801 | 98.171 | 328 | 2 | 3 | 1 | 326 | 1 | 326 | 0.0 | 650 |
| Msa0140400 | MtrunA17_Chr8g0352031 | 39.667 | 300 | 168 | 6 | 28 | 321 | 63 | 355 | 7.21e-64 | 206 |
| Msa0140400 | MtrunA17_Chr2g0328891 | 40.000 | 310 | 174 | 6 | 22 | 326 | 55 | 357 | 4.89e-63 | 204 |
| Msa0140400 | MtrunA17_Chr4g0040341 | 40.000 | 295 | 165 | 6 | 29 | 318 | 71 | 358 | 5.25e-62 | 201 |
| Msa0140400 | MtrunA17_Chr3g0088301 | 39.731 | 297 | 167 | 6 | 27 | 318 | 87 | 376 | 8.01e-61 | 199 |
| Msa0140400 | MtrunA17_Chr8g0393031 | 36.332 | 289 | 172 | 6 | 38 | 319 | 19 | 302 | 8.12e-58 | 189 |
| Msa0140400 | MtrunA17_Chr3g0135861 | 30.838 | 334 | 189 | 9 | 12 | 321 | 14 | 329 | 3.89e-40 | 144 |
| Msa0140400 | MtrunA17_Chr6g0488081 | 29.355 | 310 | 184 | 9 | 29 | 321 | 15 | 306 | 1.29e-37 | 136 |
| Msa0140400 | MtrunA17_Chr6g0488081 | 24.038 | 208 | 145 | 4 | 32 | 233 | 114 | 314 | 4.73e-14 | 71.6 |
| Msa0140400 | MtrunA17_Chr4g0067231 | 26.994 | 326 | 207 | 6 | 24 | 322 | 5 | 326 | 4.69e-36 | 132 |
| Msa0140400 | MtrunA17_Chr8g0347451 | 30.312 | 320 | 189 | 9 | 26 | 321 | 44 | 353 | 2.17e-35 | 131 |
| Msa0140400 | MtrunA17_Chr5g0396801 | 27.954 | 347 | 208 | 9 | 2 | 321 | 7 | 338 | 1.49e-34 | 129 |
| Msa0140400 | MtrunA17_Chr2g0296061 | 26.710 | 307 | 197 | 5 | 35 | 317 | 17 | 319 | 1.87e-33 | 125 |
| Msa0140400 | MtrunA17_Chr7g0240341 | 29.431 | 299 | 196 | 7 | 32 | 322 | 24 | 315 | 3.47e-33 | 124 |
| Msa0140400 | MtrunA17_Chr4g0006851 | 30.961 | 281 | 169 | 7 | 44 | 321 | 100 | 358 | 2.29e-31 | 121 |
| Msa0140400 | MtrunA17_Chr8g0385571 | 27.273 | 308 | 193 | 8 | 24 | 322 | 218 | 503 | 8.55e-30 | 118 |
| Msa0140400 | MtrunA17_Chr7g0252401 | 28.808 | 302 | 179 | 9 | 31 | 322 | 205 | 480 | 2.37e-29 | 117 |
| Msa0140400 | MtrunA17_Chr7g0242311 | 29.643 | 280 | 172 | 7 | 45 | 321 | 99 | 356 | 2.35e-28 | 113 |
| Msa0140400 | MtrunA17_Chr3g0131501 | 25.723 | 311 | 194 | 8 | 24 | 322 | 196 | 481 | 6.74e-28 | 113 |
| Msa0140400 | MtrunA17_Chr5g0436041 | 30.068 | 296 | 193 | 7 | 32 | 321 | 33 | 320 | 3.60e-27 | 108 |
| Msa0140400 | MtrunA17_Chr7g0269701 | 29.210 | 291 | 194 | 5 | 35 | 321 | 24 | 306 | 2.88e-26 | 106 |
| Msa0140400 | MtrunA17_Chr7g0269701 | 29.000 | 200 | 132 | 5 | 127 | 321 | 12 | 206 | 2.52e-15 | 75.5 |
| Msa0140400 | MtrunA17_Chr1g0149111 | 26.962 | 293 | 193 | 7 | 31 | 321 | 137 | 410 | 2.07e-23 | 99.8 |
| Msa0140400 | MtrunA17_Chr3g0137941 | 26.531 | 294 | 193 | 8 | 31 | 321 | 120 | 393 | 1.51e-22 | 97.1 |
| Msa0140400 | MtrunA17_Chr3g0137941 | 26.699 | 206 | 124 | 5 | 33 | 232 | 216 | 400 | 4.04e-16 | 78.6 |
| Msa0140400 | MtrunA17_Chr1g0195101 | 27.758 | 281 | 191 | 5 | 45 | 321 | 31 | 303 | 1.89e-22 | 95.5 |
| Msa0140400 | MtrunA17_Chr1g0195101 | 29.648 | 199 | 131 | 6 | 127 | 318 | 4 | 200 | 1.67e-11 | 64.3 |
| Msa0140400 | MtrunA17_Chr4g0063561 | 27.157 | 313 | 205 | 10 | 12 | 321 | 102 | 394 | 1.41e-21 | 94.4 |
| Msa0140400 | MtrunA17_Chr4g0063561 | 29.798 | 198 | 115 | 5 | 34 | 227 | 219 | 396 | 1.43e-15 | 77.0 |
| Msa0140400 | MtrunA17_Chr5g0423111 | 27.875 | 287 | 183 | 8 | 45 | 321 | 33 | 305 | 2.66e-20 | 90.1 |
| Msa0140400 | MtrunA17_Chr3g0115801 | 25.723 | 346 | 209 | 8 | 1 | 321 | 80 | 402 | 9.78e-20 | 89.0 |
| Msa0140400 | MtrunA17_Chr8g0366791 | 25.083 | 303 | 206 | 11 | 27 | 319 | 3 | 294 | 3.38e-19 | 86.3 |
| Msa0140400 | MtrunA17_Chr4g0008061 | 25.818 | 275 | 192 | 4 | 49 | 320 | 31 | 296 | 4.40e-19 | 85.9 |
| Msa0140400 | MtrunA17_Chr3g0133111 | 24.281 | 313 | 204 | 8 | 37 | 322 | 5 | 311 | 1.62e-18 | 84.7 |
| Msa0140400 | MtrunA17_Chr5g0411411 | 23.102 | 303 | 214 | 9 | 26 | 319 | 2 | 294 | 2.16e-17 | 81.3 |
| Msa0140400 | MtrunA17_Chr7g0241521 | 23.466 | 277 | 198 | 5 | 49 | 321 | 33 | 299 | 5.15e-17 | 80.1 |
| Msa0140400 | MtrunA17_Chr7g0241521 | 28.641 | 206 | 134 | 6 | 124 | 319 | 3 | 205 | 4.89e-16 | 77.4 |
| Msa0140400 | MtrunA17_Chr6g0463041 | 24.242 | 231 | 128 | 5 | 132 | 321 | 16 | 240 | 6.79e-17 | 79.0 |
| Msa0140400 | MtrunA17_Chr5g0412401 | 23.922 | 255 | 179 | 7 | 76 | 322 | 73 | 320 | 1.67e-15 | 76.3 |
| Msa0140400 | MtrunA17_Chr4g0028531 | 24.211 | 285 | 187 | 8 | 36 | 311 | 28 | 292 | 1.71e-15 | 75.9 |
| Msa0140400 | MtrunA17_Chr4g0046981 | 27.363 | 201 | 130 | 6 | 133 | 322 | 4 | 199 | 1.86e-15 | 75.9 |
| Msa0140400 | MtrunA17_Chr7g0275411 | 23.964 | 338 | 219 | 9 | 16 | 320 | 1 | 333 | 2.51e-15 | 75.9 |
| Msa0140400 | MtrunA17_Chr4g0000261 | 25.723 | 311 | 185 | 12 | 31 | 319 | 64 | 350 | 1.01e-14 | 74.3 |
| Msa0140400 | MtrunA17_Chr3g0086811 | 27.136 | 199 | 124 | 4 | 141 | 319 | 28 | 225 | 1.35e-14 | 73.6 |
| Msa0140400 | MtrunA17_Chr8g0382201 | 25.714 | 315 | 190 | 9 | 28 | 321 | 190 | 481 | 1.76e-14 | 73.9 |
| Msa0140400 | MtrunA17_Chr3g0103681 | 22.648 | 287 | 210 | 4 | 20 | 303 | 2 | 279 | 2.75e-14 | 72.4 |
| Msa0140400 | MtrunA17_Chr8g0372531 | 26.347 | 167 | 121 | 2 | 155 | 319 | 28 | 194 | 1.11e-13 | 70.5 |
| Msa0140400 | MtrunA17_Chr1g0205941 | 21.543 | 311 | 199 | 11 | 35 | 323 | 13 | 300 | 3.38e-13 | 69.3 |
| Msa0140400 | MtrunA17_Chr2g0293621 | 25.083 | 303 | 193 | 12 | 36 | 320 | 32 | 318 | 8.75e-12 | 65.1 |
| Msa0140400 | MtrunA17_Chr1g0201361 | 24.092 | 303 | 178 | 10 | 2 | 296 | 20 | 278 | 2.09e-11 | 63.9 |
| Msa0140400 | MtrunA17_Chr7g0219891 | 27.083 | 192 | 122 | 5 | 141 | 321 | 21 | 205 | 5.59e-11 | 62.8 |
| Msa0140400 | MtrunA17_Chr8g0367641 | 22.267 | 247 | 180 | 5 | 82 | 322 | 73 | 313 | 8.29e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140400 | AT5G56450.1 | 75.915 | 328 | 73 | 3 | 1 | 324 | 3 | 328 | 0.0 | 518 |
| Msa0140400 | AT5G13490.1 | 39.799 | 299 | 167 | 6 | 26 | 318 | 81 | 372 | 3.74e-63 | 205 |
| Msa0140400 | AT5G13490.2 | 39.799 | 299 | 167 | 6 | 26 | 318 | 81 | 372 | 3.74e-63 | 205 |
| Msa0140400 | AT5G17400.1 | 36.964 | 303 | 175 | 8 | 29 | 323 | 10 | 304 | 1.54e-62 | 201 |
| Msa0140400 | AT3G08580.2 | 39.465 | 299 | 168 | 6 | 26 | 318 | 77 | 368 | 2.32e-62 | 203 |
| Msa0140400 | AT3G08580.1 | 39.465 | 299 | 168 | 6 | 26 | 318 | 77 | 368 | 2.32e-62 | 203 |
| Msa0140400 | AT4G28390.1 | 38.983 | 295 | 168 | 6 | 29 | 318 | 79 | 366 | 1.47e-59 | 196 |
| Msa0140400 | AT4G28390.2 | 38.983 | 295 | 168 | 6 | 29 | 318 | 79 | 366 | 1.47e-59 | 196 |
| Msa0140400 | AT4G26180.1 | 31.922 | 307 | 175 | 10 | 29 | 318 | 17 | 306 | 2.55e-37 | 136 |
| Msa0140400 | AT4G01100.1 | 29.859 | 355 | 204 | 9 | 1 | 321 | 1 | 344 | 8.08e-37 | 135 |
| Msa0140400 | AT4G26180.2 | 31.959 | 291 | 165 | 9 | 29 | 303 | 17 | 290 | 4.14e-36 | 132 |
| Msa0140400 | AT4G01100.2 | 28.689 | 366 | 208 | 9 | 1 | 321 | 1 | 358 | 1.26e-34 | 130 |
| Msa0140400 | AT3G53940.1 | 29.970 | 337 | 197 | 13 | 2 | 322 | 48 | 361 | 6.26e-34 | 128 |
| Msa0140400 | AT5G48970.1 | 28.431 | 306 | 188 | 6 | 32 | 310 | 21 | 322 | 8.70e-34 | 127 |
| Msa0140400 | AT3G51870.1 | 32.028 | 281 | 166 | 8 | 44 | 321 | 102 | 360 | 4.03e-33 | 126 |
| Msa0140400 | AT2G37890.1 | 29.712 | 313 | 190 | 13 | 24 | 322 | 37 | 333 | 1.38e-32 | 124 |
| Msa0140400 | AT2G37890.1 | 24.286 | 210 | 145 | 3 | 19 | 227 | 138 | 334 | 6.68e-13 | 68.9 |
| Msa0140400 | AT4G01100.3 | 30.464 | 302 | 174 | 8 | 45 | 321 | 4 | 294 | 5.35e-32 | 121 |
| Msa0140400 | AT1G14560.1 | 30.897 | 301 | 165 | 11 | 45 | 321 | 39 | 320 | 1.61e-31 | 120 |
| Msa0140400 | AT5G01500.1 | 31.206 | 282 | 167 | 8 | 44 | 321 | 130 | 388 | 2.01e-30 | 119 |
| Msa0140400 | AT1G14560.2 | 31.206 | 282 | 152 | 10 | 45 | 303 | 39 | 301 | 7.10e-30 | 116 |
| Msa0140400 | AT3G21390.1 | 25.962 | 312 | 201 | 5 | 32 | 317 | 18 | 325 | 7.78e-29 | 114 |
| Msa0140400 | AT5G61810.2 | 28.912 | 294 | 174 | 9 | 33 | 319 | 65 | 330 | 9.65e-29 | 113 |
| Msa0140400 | AT3G21390.2 | 26.230 | 305 | 195 | 5 | 32 | 310 | 40 | 340 | 1.55e-28 | 113 |
| Msa0140400 | AT5G61810.1 | 28.912 | 294 | 174 | 9 | 33 | 319 | 208 | 473 | 2.41e-28 | 114 |
| Msa0140400 | AT3G55640.1 | 29.022 | 317 | 199 | 11 | 22 | 322 | 20 | 326 | 8.73e-28 | 110 |
| Msa0140400 | AT3G55640.4 | 29.022 | 317 | 199 | 11 | 22 | 322 | 20 | 326 | 8.73e-28 | 110 |
| Msa0140400 | AT5G48970.2 | 28.862 | 246 | 150 | 4 | 86 | 310 | 10 | 251 | 3.67e-27 | 107 |
| Msa0140400 | AT5G07320.1 | 27.972 | 286 | 167 | 10 | 45 | 321 | 221 | 476 | 7.41e-24 | 102 |
| Msa0140400 | AT5G51050.1 | 26.756 | 299 | 185 | 9 | 33 | 322 | 223 | 496 | 1.85e-23 | 100 |
| Msa0140400 | AT4G32400.1 | 26.871 | 294 | 192 | 7 | 31 | 321 | 112 | 385 | 5.53e-23 | 98.6 |
| Msa0140400 | AT4G32400.1 | 29.268 | 205 | 118 | 6 | 32 | 230 | 207 | 390 | 1.96e-16 | 79.7 |
| Msa0140400 | AT3G53940.2 | 31.004 | 229 | 132 | 7 | 2 | 222 | 48 | 258 | 1.03e-22 | 96.3 |
| Msa0140400 | AT3G55640.2 | 30.806 | 211 | 131 | 5 | 22 | 223 | 20 | 224 | 1.11e-20 | 90.1 |
| Msa0140400 | AT3G55640.3 | 30.806 | 211 | 131 | 5 | 22 | 223 | 20 | 224 | 1.11e-20 | 90.1 |
| Msa0140400 | AT1G14560.3 | 30.952 | 210 | 116 | 6 | 135 | 321 | 19 | 222 | 1.64e-20 | 89.0 |
| Msa0140400 | AT1G25380.1 | 27.660 | 282 | 189 | 8 | 45 | 320 | 33 | 305 | 2.89e-20 | 90.5 |
| Msa0140400 | AT1G25380.2 | 27.660 | 282 | 189 | 8 | 45 | 320 | 33 | 305 | 2.89e-20 | 90.5 |
| Msa0140400 | AT2G47490.1 | 27.046 | 281 | 192 | 6 | 45 | 321 | 29 | 300 | 2.09e-19 | 87.4 |
| Msa0140400 | AT3G54110.1 | 26.014 | 296 | 181 | 9 | 41 | 321 | 25 | 297 | 3.08e-19 | 87.0 |
| Msa0140400 | AT3G54110.1 | 25.926 | 189 | 131 | 4 | 140 | 319 | 14 | 202 | 4.84e-13 | 68.9 |
| Msa0140400 | AT3G20240.1 | 24.430 | 307 | 194 | 9 | 31 | 319 | 50 | 336 | 4.84e-19 | 87.0 |
| Msa0140400 | AT5G58970.1 | 24.662 | 296 | 209 | 5 | 28 | 319 | 11 | 296 | 3.24e-18 | 84.0 |
| Msa0140400 | AT1G78180.1 | 26.183 | 317 | 186 | 7 | 28 | 321 | 123 | 414 | 4.55e-17 | 82.0 |
| Msa0140400 | AT5G64970.1 | 27.124 | 306 | 175 | 7 | 28 | 310 | 130 | 410 | 5.58e-17 | 81.6 |
| Msa0140400 | AT5G46800.2 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.34e-16 | 77.4 |
| Msa0140400 | AT5G46800.3 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.34e-16 | 77.4 |
| Msa0140400 | AT5G46800.1 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.34e-16 | 77.4 |
| Msa0140400 | AT5G64970.3 | 26.756 | 299 | 171 | 7 | 28 | 303 | 130 | 403 | 8.51e-16 | 78.2 |
| Msa0140400 | AT5G64970.2 | 26.625 | 323 | 183 | 8 | 20 | 319 | 4 | 295 | 9.92e-16 | 77.0 |
| Msa0140400 | AT2G22500.1 | 26.122 | 245 | 167 | 6 | 83 | 320 | 70 | 307 | 3.15e-14 | 72.8 |
| Msa0140400 | AT5G58970.2 | 27.895 | 190 | 127 | 5 | 140 | 319 | 15 | 204 | 3.30e-14 | 72.0 |
| Msa0140400 | AT2G46320.1 | 21.972 | 355 | 229 | 6 | 10 | 320 | 3 | 353 | 4.40e-14 | 72.8 |
| Msa0140400 | AT2G33820.1 | 26.842 | 190 | 123 | 6 | 140 | 318 | 17 | 201 | 8.79e-14 | 71.2 |
| Msa0140400 | AT1G14140.1 | 24.231 | 260 | 178 | 10 | 44 | 296 | 27 | 274 | 9.63e-14 | 71.2 |
| Msa0140400 | AT2G33820.4 | 26.804 | 194 | 126 | 6 | 136 | 318 | 13 | 201 | 9.94e-14 | 70.9 |
| Msa0140400 | AT5G01340.1 | 24.832 | 298 | 181 | 11 | 39 | 317 | 22 | 295 | 3.47e-13 | 69.7 |
| Msa0140400 | AT5G66380.1 | 27.225 | 191 | 124 | 5 | 140 | 321 | 9 | 193 | 5.30e-13 | 68.9 |
| Msa0140400 | AT5G66380.1 | 22.742 | 299 | 211 | 7 | 35 | 322 | 12 | 301 | 1.24e-11 | 65.1 |
| Msa0140400 | AT4G24570.1 | 24.180 | 244 | 172 | 5 | 82 | 321 | 76 | 310 | 9.60e-13 | 68.2 |
| Msa0140400 | AT1G34065.2 | 28.821 | 229 | 127 | 8 | 7 | 230 | 136 | 333 | 1.47e-12 | 67.8 |
| Msa0140400 | AT1G34065.1 | 28.821 | 229 | 127 | 8 | 7 | 230 | 143 | 340 | 1.60e-12 | 67.8 |
| Msa0140400 | AT4G27940.1 | 23.132 | 281 | 189 | 5 | 61 | 321 | 133 | 406 | 1.92e-12 | 68.2 |
| Msa0140400 | AT1G74240.1 | 23.671 | 207 | 136 | 4 | 140 | 325 | 35 | 240 | 5.51e-12 | 66.2 |
| Msa0140400 | AT2G30160.1 | 24.510 | 306 | 200 | 11 | 28 | 322 | 37 | 322 | 5.63e-12 | 66.2 |
| Msa0140400 | AT5G27520.1 | 22.186 | 311 | 197 | 11 | 35 | 323 | 15 | 302 | 2.96e-11 | 63.9 |
| Msa0140400 | AT2G33820.3 | 25.743 | 202 | 126 | 7 | 136 | 318 | 13 | 209 | 3.62e-11 | 63.5 |
| Msa0140400 | AT3G05290.1 | 22.508 | 311 | 196 | 11 | 35 | 323 | 13 | 300 | 7.29e-11 | 62.8 |
| Msa0140400 | AT1G07030.1 | 21.523 | 302 | 211 | 6 | 28 | 322 | 35 | 317 | 9.83e-11 | 62.4 |
Find 116 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTTACAAAAGCATATTA+AGG | 0.230398 | 1_3:-74646525 | Msa0140400:CDS |
| TGAATGGCATTTCAACTAAA+AGG | 0.239264 | 1_3:-74645746 | Msa0140400:three_prime_UTR |
| TATACATTACATTGAGGTTT+AGG | 0.269915 | 1_3:-74645823 | Msa0140400:three_prime_UTR |
| GCAGACACAAGAAAGTAATT+TGG | 0.276307 | 1_3:-74649645 | Msa0140400:CDS |
| TGCACTCAATTTCTCTCTTA+AGG | 0.286938 | 1_3:-74649492 | Msa0140400:intron |
| TTGCTTAATCACACATGATT+AGG | 0.293403 | 1_3:-74649943 | Msa0140400:five_prime_UTR |
| GTATAGTCACCAATTTAAAA+AGG | 0.303725 | 1_3:-74645721 | Msa0140400:three_prime_UTR |
| ATTGTATTATTCGTACTGTT+AGG | 0.303928 | 1_3:-74649580 | Msa0140400:CDS |
| GAGCAGTTTCGAATGTGTTT+AGG | 0.310097 | 1_3:-74645985 | Msa0140400:CDS |
| ATTCACAAACTTTGCTCAAA+AGG | 0.340101 | 1_3:+74649874 | None:intergenic |
| TCTCTTTGTGGCGTGGTAAT+GGG | 0.341488 | 1_3:-74649544 | Msa0140400:CDS |
| ATCTCTTTGTGGCGTGGTAA+TGG | 0.347053 | 1_3:-74649545 | Msa0140400:CDS |
| ACCTCAATGTAATGTATAAC+AGG | 0.350280 | 1_3:+74645828 | None:intergenic |
| AGGTCAAGAAATTTATGAAC+TGG | 0.380390 | 1_3:-74645925 | Msa0140400:CDS |
| CTCAGTTAACTACGTTGGTT+TGG | 0.384547 | 1_3:+74645882 | None:intergenic |
| TCTTATGGCTGGTGCGGTGA+TGG | 0.394510 | 1_3:-74649720 | Msa0140400:CDS |
| GCTCCAGAGAAAATATTATC+AGG | 0.395058 | 1_3:+74646484 | None:intergenic |
| TGTAATAATAAGATTATGAT+TGG | 0.400234 | 1_3:-74645637 | Msa0140400:three_prime_UTR |
| ATTACACCCTCATCAATCAT+TGG | 0.404045 | 1_3:+74645654 | None:intergenic |
| ATTTGAAAATGCATCTTGAA+TGG | 0.404307 | 1_3:-74645762 | Msa0140400:three_prime_UTR |
| ATCAAAACTATCTTTGTCAA+TGG | 0.425899 | 1_3:-74650077 | None:intergenic |
| TCTTTACAAAAGCATATTAA+GGG | 0.444375 | 1_3:-74646524 | Msa0140400:CDS |
| TATTCCAGAAAGACGGGGTA+CGG | 0.444967 | 1_3:-74646312 | Msa0140400:CDS |
| TCGAATGTGTTTAGGAGCAC+TGG | 0.445834 | 1_3:-74645977 | Msa0140400:CDS |
| ATTCGTACTGTTAGGGAAGA+AGG | 0.446792 | 1_3:-74649572 | Msa0140400:CDS |
| CTTATGGCTGGTGCGGTGAT+GGG | 0.449033 | 1_3:-74649719 | Msa0140400:CDS |
| GGAATATAGTGGCTAAGAAA+TGG | 0.449880 | 1_3:+74646329 | None:intergenic |
| TCCAATGTCAGCAGCAAGGC+GGG | 0.451091 | 1_3:+74646384 | None:intergenic |
| ATTCCAGAAAGACGGGGTAC+GGG | 0.453968 | 1_3:-74646311 | Msa0140400:CDS |
| TTAAGCAAGCTTAATTCAAA+AGG | 0.455436 | 1_3:+74649958 | None:intergenic |
| GGCGGGTGTGTGCAATATCA+AGG | 0.457851 | 1_3:+74646401 | None:intergenic |
| TGAAATGCGTGTTGTGTGTA+TGG | 0.461075 | 1_3:+74649993 | None:intergenic |
| TTCACAAACTTTGCTCAAAA+GGG | 0.462339 | 1_3:+74649875 | None:intergenic |
| CGGAGAATGATGATGCAGTC+TGG | 0.466596 | 1_3:-74646091 | Msa0140400:CDS |
| AGTTACAACCTCAGCCGGTC+TGG | 0.467544 | 1_3:-74646140 | Msa0140400:CDS |
| AATAACTTAGCCCTCTCAAT+TGG | 0.476467 | 1_3:+74649671 | None:intergenic |
| TTGTATTATTCGTACTGTTA+GGG | 0.477702 | 1_3:-74649579 | Msa0140400:CDS |
| AAGAAGGTGTTATCTCTTTG+TGG | 0.477794 | 1_3:-74649556 | Msa0140400:CDS |
| ACCCGCCTTGCTGCTGACAT+TGG | 0.479408 | 1_3:-74646385 | Msa0140400:CDS |
| CAGGTTGTAATGAAAGTAAC+CGG | 0.479608 | 1_3:+74645847 | None:intergenic |
| ACAATAGCACCCTCGACTGC+TGG | 0.481567 | 1_3:-74646051 | Msa0140400:CDS |
| CCACTATATTCCAGAAAGAC+GGG | 0.483157 | 1_3:-74646318 | Msa0140400:CDS |
| ACCATACCATGTAGTGATGC+AGG | 0.497343 | 1_3:+74646271 | None:intergenic |
| AGCAAATATTGTCATGGCCG+AGG | 0.499911 | 1_3:-74645691 | Msa0140400:three_prime_UTR |
| GCAGTCTGGCATGGAACATC+CGG | 0.500996 | 1_3:-74646077 | Msa0140400:CDS |
| TTTCAACGCGATCTTATGGC+TGG | 0.502715 | 1_3:-74649731 | Msa0140400:CDS |
| TTTGTGGCTGGAGCTGCAGC+AGG | 0.504904 | 1_3:-74646451 | Msa0140400:CDS |
| TCCTGCATCACTACATGGTA+TGG | 0.515940 | 1_3:-74646272 | Msa0140400:CDS |
| AGGTAGGAATTGAAATTCGT+TGG | 0.516417 | 1_3:+74650028 | None:intergenic |
| CGCTTCCACAACGCCAACTC+AGG | 0.520701 | 1_3:+74646181 | None:intergenic |
| TACTAGTACAATAGTTTACA+AGG | 0.522434 | 1_3:+74645585 | None:intergenic |
| GGTCTTCCTGCATCACTACA+TGG | 0.523489 | 1_3:-74646277 | Msa0140400:CDS |
| GCCTTGCTGCTGACATTGGA+AGG | 0.525002 | 1_3:-74646381 | Msa0140400:CDS |
| CACAGAGGTCTTTACTTCGG+AGG | 0.532931 | 1_3:-74646244 | Msa0140400:CDS |
| ACCTGTTATACATTACATTG+AGG | 0.532982 | 1_3:-74645829 | Msa0140400:three_prime_UTR |
| ATATGATACCAGACCGGCTG+AGG | 0.533015 | 1_3:+74646132 | None:intergenic |
| GAGAAATTGAGTGCAACAGA+AGG | 0.533707 | 1_3:+74649500 | None:intergenic |
| GTGTATGGTGGCTGCGGACA+AGG | 0.535525 | 1_3:+74650008 | None:intergenic |
| GCCACTATATTCCAGAAAGA+CGG | 0.536387 | 1_3:-74646319 | Msa0140400:CDS |
| TTCCAGAAAGACGGGGTACG+GGG | 0.537972 | 1_3:-74646310 | Msa0140400:CDS |
| GCGGGTGTGTGCAATATCAA+GGG | 0.541293 | 1_3:+74646402 | None:intergenic |
| GTGGTAGAAGAAAATTCAAA+GGG | 0.543264 | 1_3:-74649610 | Msa0140400:CDS |
| GGTCAAGAAATTTATGAACT+GGG | 0.543499 | 1_3:-74645924 | Msa0140400:CDS |
| TGAAGAATCTAAACCTGAGT+TGG | 0.544164 | 1_3:-74646194 | Msa0140400:CDS |
| ATGGCTGGTGCGGTGATGGG+TGG | 0.553337 | 1_3:-74649716 | Msa0140400:CDS |
| TGCTGCTGACATTGGAAGGA+CGG | 0.555913 | 1_3:-74646377 | Msa0140400:CDS |
| TGGTGCGGTGATGGGTGGTG+CGG | 0.558043 | 1_3:-74649711 | Msa0140400:CDS |
| GCAAATATTGTCATGGCCGA+GGG | 0.562528 | 1_3:-74645690 | Msa0140400:three_prime_UTR |
| AGTGGTAGAAGAAAATTCAA+AGG | 0.562791 | 1_3:-74649611 | Msa0140400:CDS |
| AAAAGCATATTAAGGGGTGG+AGG | 0.566280 | 1_3:-74646517 | Msa0140400:CDS |
| AGGTTGTACATCACTCATCT+TGG | 0.571908 | 1_3:-74646431 | Msa0140400:CDS |
| CAAGCAGTTACAACCTCAGC+CGG | 0.572927 | 1_3:-74646145 | Msa0140400:CDS |
| AATGATGATGCAGTCTGGCA+TGG | 0.576929 | 1_3:-74646086 | Msa0140400:CDS |
| AGGAAAATCTATCGAACAGA+GGG | 0.577446 | 1_3:-74646028 | Msa0140400:CDS |
| CTAAGAAATGGTGAATGCCT+CGG | 0.578562 | 1_3:+74646341 | None:intergenic |
| ATGAACTCAGTTAACTACGT+TGG | 0.580668 | 1_3:+74645877 | None:intergenic |
| ACAGAGGTCTTTACTTCGGA+GGG | 0.582487 | 1_3:-74646243 | Msa0140400:CDS |
| TGGCTTCTAATCTAGTCCCT+CGG | 0.586919 | 1_3:+74645674 | None:intergenic |
| CCCGTCTTTCTGGAATATAG+TGG | 0.589385 | 1_3:+74646318 | None:intergenic |
| TGTTGTGTGTATGGTGGCTG+CGG | 0.594245 | 1_3:+74650002 | None:intergenic |
| TAATTAAGCAAATATTGTCA+TGG | 0.599091 | 1_3:-74645697 | Msa0140400:three_prime_UTR |
| ATACACAGAGGTCTTTACTT+CGG | 0.599114 | 1_3:-74646247 | Msa0140400:CDS |
| AATTTGGCTATTGTTGCTAG+TGG | 0.601620 | 1_3:-74649629 | Msa0140400:CDS |
| TCCTTCCAATGTCAGCAGCA+AGG | 0.602029 | 1_3:+74646380 | None:intergenic |
| TCCAGAAAGACGGGGTACGG+GGG | 0.606693 | 1_3:-74646309 | Msa0140400:CDS |
| CAATTGTGGCACCAATTGAG+AGG | 0.607857 | 1_3:-74649682 | Msa0140400:CDS |
| TACAAAAGCATATTAAGGGG+TGG | 0.608973 | 1_3:-74646520 | Msa0140400:CDS |
| GCGGCGAATTTAAGGATGAG+TGG | 0.609005 | 1_3:-74649830 | Msa0140400:exon |
| AGTTGGCGTTGTGGAAGCGA+TGG | 0.612266 | 1_3:-74646177 | Msa0140400:CDS |
| CTAAACCTGAGTTGGCGTTG+TGG | 0.612706 | 1_3:-74646186 | Msa0140400:CDS |
| GGCGTTGTGGAAGCGATGGA+TGG | 0.614379 | 1_3:-74646173 | Msa0140400:CDS |
| GGTGTTATCTCTTTGTGGCG+TGG | 0.614711 | 1_3:-74649551 | Msa0140400:CDS |
| TATCTTAGTCTTGTATGATG+AGG | 0.616581 | 1_3:-74645945 | Msa0140400:CDS |
| TTAGAAGCCAATGATTGATG+AGG | 0.616709 | 1_3:-74645661 | Msa0140400:three_prime_UTR |
| TAGAAGCCAATGATTGATGA+GGG | 0.619868 | 1_3:-74645660 | Msa0140400:three_prime_UTR |
| GTCAAGAAATTTATGAACTG+GGG | 0.624053 | 1_3:-74645923 | Msa0140400:CDS |
| ACGCGATCTTATGGCTGGTG+CGG | 0.629220 | 1_3:-74649726 | Msa0140400:CDS |
| ATAGCACCCTCGACTGCTGG+AGG | 0.632984 | 1_3:-74646048 | Msa0140400:CDS |
| CTTTACAAAAGCATATTAAG+GGG | 0.639364 | 1_3:-74646523 | Msa0140400:CDS |
| ACGGAAGTGCGTCAATTCCG+AGG | 0.643237 | 1_3:-74646358 | Msa0140400:CDS |
| AATTGTGGCACCAATTGAGA+GGG | 0.649550 | 1_3:-74649681 | Msa0140400:CDS |
| CGGGTGTGTGCAATATCAAG+GGG | 0.649657 | 1_3:+74646403 | None:intergenic |
| CTCCGACGAACTGTGTCTAG+CGG | 0.655045 | 1_3:+74646109 | None:intergenic |
| ATGGTGGCTGCGGACAAGGT+AGG | 0.655388 | 1_3:+74650012 | None:intergenic |
| GAATTTAAGGATGAGTGGAG+AGG | 0.658027 | 1_3:-74649825 | Msa0140400:exon |
| TAGCGGATATGATACCAGAC+CGG | 0.667445 | 1_3:+74646126 | None:intergenic |
| ATCCGCTAGACACAGTTCGT+CGG | 0.667711 | 1_3:-74646111 | Msa0140400:CDS |
| TGGTGCGGTTCATACAATTG+TGG | 0.667762 | 1_3:-74649696 | Msa0140400:CDS |
| TCGAGGGTGCTATTGTACAC+CGG | 0.673149 | 1_3:+74646058 | None:intergenic |
| TTCCAATGTCAGCAGCAAGG+CGG | 0.673559 | 1_3:+74646383 | None:intergenic |
| CACTATATTCCAGAAAGACG+GGG | 0.686407 | 1_3:-74646317 | Msa0140400:CDS |
| GAGGAAAATCTATCGAACAG+AGG | 0.690051 | 1_3:-74646029 | Msa0140400:CDS |
| AATGCGTGTTGTGTGTATGG+TGG | 0.710105 | 1_3:+74649996 | None:intergenic |
| ACACATTCGAAACTGCTCCG+CGG | 0.751998 | 1_3:+74645990 | None:intergenic |
| CATGGTATGGTGATACACAG+AGG | 0.757473 | 1_3:-74646259 | Msa0140400:CDS |
| GGGTGTGTGCAATATCAAGG+GGG | 0.800764 | 1_3:+74646404 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATATTATGAAAACATT+TGG | - | chr1_3:74646197-74646216 | Msa0140400:CDS | 10.0% |
| !!! | TTTTATTTTATTTTACAAGA+TGG | - | chr1_3:74647574-74647593 | Msa0140400:intron | 10.0% |
| !!! | TTTTAAAAGAAAAGATTTTG+CGG | - | chr1_3:74645762-74645781 | Msa0140400:three_prime_UTR | 15.0% |
| !! | CTTTAATCTTTATTATGAAA+TGG | - | chr1_3:74646150-74646169 | Msa0140400:CDS | 15.0% |
| !!! | ATTAATAACTTGCAATATTA+GGG | + | chr1_3:74646181-74646200 | None:intergenic | 15.0% |
| !!! | TATTAATAACTTGCAATATT+AGG | + | chr1_3:74646182-74646201 | None:intergenic | 15.0% |
| !!! | AATGCATTTTTAAATGAAAT+AGG | + | chr1_3:74648217-74648236 | None:intergenic | 15.0% |
| !! | ATTTGTATTAATTCCAATAT+TGG | - | chr1_3:74648315-74648334 | Msa0140400:intron | 15.0% |
| !!! | TAAAATTTCAGAATTTTTTC+TGG | - | chr1_3:74648599-74648618 | Msa0140400:intron | 15.0% |
| !!! | CTTAATTAACCTTTTTAAAT+TGG | + | chr1_3:74649902-74649921 | None:intergenic | 15.0% |
| !! | TGTAATAATAAGATTATGAT+TGG | - | chr1_3:74649974-74649993 | Msa0140400:five_prime_UTR | 15.0% |
| !! | AACAATAAACAAACACTAAA+TGG | + | chr1_3:74646344-74646363 | None:intergenic | 20.0% |
| !! | CAAACAATATATAATAACAC+GGG | + | chr1_3:74646684-74646703 | None:intergenic | 20.0% |
| !! | GCAAACAATATATAATAACA+CGG | + | chr1_3:74646685-74646704 | None:intergenic | 20.0% |
| !! | AAAAAAAACTATTAAGAGCT+CGG | + | chr1_3:74647415-74647434 | None:intergenic | 20.0% |
| !! | AAGTATAGGAAAAGTAATAA+TGG | - | chr1_3:74647825-74647844 | Msa0140400:intron | 20.0% |
| !!! | ACTTTTATTGATGATAGAAT+AGG | + | chr1_3:74648290-74648309 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGTGATAGAAAC+TGG | + | chr1_3:74648343-74648362 | None:intergenic | 20.0% |
| !! | AGTTTCTATCACAAAATAAA+TGG | - | chr1_3:74648342-74648361 | Msa0140400:intron | 20.0% |
| !! | ATTAGTAATATTGTGACAAA+TGG | - | chr1_3:74648765-74648784 | Msa0140400:intron | 20.0% |
| !! | ATAAAAATGCTACTAAAATG+TGG | + | chr1_3:74648833-74648852 | None:intergenic | 20.0% |
| !!! | ATCTTTACAAAAGCATATTA+AGG | - | chr1_3:74649086-74649105 | Msa0140400:intron | 20.0% |
| !!! | TCTTTACAAAAGCATATTAA+GGG | - | chr1_3:74649087-74649106 | Msa0140400:intron | 20.0% |
| !!! | CATTTTCAAATGAACTATAA+TGG | + | chr1_3:74649840-74649859 | None:intergenic | 20.0% |
| !! | TAATTAAGCAAATATTGTCA+TGG | - | chr1_3:74649914-74649933 | Msa0140400:five_prime_UTR | 20.0% |
| ! | TTAAGCAAGCTTAATTCAAA+AGG | + | chr1_3:74645656-74645675 | None:intergenic | 25.0% |
| !!! | TCAAAGCTTTTTTTTCTTCT+GGG | + | chr1_3:74645819-74645838 | None:intergenic | 25.0% |
| !!! | TTCAAAGCTTTTTTTTCTTC+TGG | + | chr1_3:74645820-74645839 | None:intergenic | 25.0% |
| ! | ATTGTATTATTCGTACTGTT+AGG | - | chr1_3:74646031-74646050 | Msa0140400:CDS | 25.0% |
| ! | TTGTATTATTCGTACTGTTA+GGG | - | chr1_3:74646032-74646051 | Msa0140400:CDS | 25.0% |
| ! | CATACAAAACCATCATAAAA+GGG | + | chr1_3:74646254-74646273 | None:intergenic | 25.0% |
| ! | ATTATCATAATAGATCCTCA+TGG | - | chr1_3:74646642-74646661 | Msa0140400:intron | 25.0% |
| ! | AATATATAATAACACGGGAA+TGG | + | chr1_3:74646679-74646698 | None:intergenic | 25.0% |
| !! | AATATTCTAGAAGAACCTTA+TGG | - | chr1_3:74647124-74647143 | Msa0140400:intron | 25.0% |
| !! | ATATTCTAGAAGAACCTTAT+GGG | - | chr1_3:74647125-74647144 | Msa0140400:intron | 25.0% |
| ! | AAAATAATCCGATCAAAACA+CGG | + | chr1_3:74647228-74647247 | None:intergenic | 25.0% |
| ! | GATAATCAGGAATTATAATG+CGG | + | chr1_3:74647342-74647361 | None:intergenic | 25.0% |
| !! | AAATTTGACCTTTTTCTTCT+CGG | + | chr1_3:74647515-74647534 | None:intergenic | 25.0% |
| ! | ATGAACTCAAAGATGTAATA+AGG | - | chr1_3:74648029-74648048 | Msa0140400:intron | 25.0% |
| ! | TGAACTCAAAGATGTAATAA+GGG | - | chr1_3:74648030-74648049 | Msa0140400:intron | 25.0% |
| !! | CTAATGACTTTTCTTAATGA+AGG | + | chr1_3:74648104-74648123 | None:intergenic | 25.0% |
| ! | CTTCATTAAGAAAAGTCATT+AGG | - | chr1_3:74648102-74648121 | Msa0140400:intron | 25.0% |
| !!! | AGTCATTAGGCATTTATTTT+AGG | - | chr1_3:74648115-74648134 | Msa0140400:intron | 25.0% |
| !!! | TTTTAGGATTGACTATTGAT+TGG | - | chr1_3:74648131-74648150 | Msa0140400:intron | 25.0% |
| !! | TTTAGGATTGACTATTGATT+GGG | - | chr1_3:74648132-74648151 | Msa0140400:intron | 25.0% |
| !! | TTAGTTTACCATACTGTTTT+TGG | - | chr1_3:74648258-74648277 | Msa0140400:intron | 25.0% |
| ! | TCAATTTGAGTGTTAAACTA+AGG | + | chr1_3:74648395-74648414 | None:intergenic | 25.0% |
| ! | TCATTTCATTATAACATGGA+TGG | + | chr1_3:74648424-74648443 | None:intergenic | 25.0% |
| ! | AGGTTCATTTCATTATAACA+TGG | + | chr1_3:74648428-74648447 | None:intergenic | 25.0% |
| !!! | CGCTCTTTTAATTTAAAAGA+AGG | + | chr1_3:74648448-74648467 | None:intergenic | 25.0% |
| !! | ACTTAATCTACACCTTTTAA+TGG | - | chr1_3:74648478-74648497 | Msa0140400:intron | 25.0% |
| !! | CTTAATCTACACCTTTTAAT+GGG | - | chr1_3:74648479-74648498 | Msa0140400:intron | 25.0% |
| !! | TTGAAATTTGCTTACGTAAA+AGG | - | chr1_3:74648543-74648562 | Msa0140400:intron | 25.0% |
| ! | TTACTACAAAAAGCAAGATA+TGG | - | chr1_3:74648711-74648730 | Msa0140400:intron | 25.0% |
| ! | CACAATATTACTAATGCATA+TGG | + | chr1_3:74648760-74648779 | None:intergenic | 25.0% |
| ! | ATCAACATAGGTTAAAACTT+TGG | - | chr1_3:74648872-74648891 | Msa0140400:intron | 25.0% |
| ! | TCAACATAGGTTAAAACTTT+GGG | - | chr1_3:74648873-74648892 | Msa0140400:intron | 25.0% |
| !! | CTTTACAAAAGCATATTAAG+GGG | - | chr1_3:74649088-74649107 | Msa0140400:intron | 25.0% |
| !! | AATCCTGATAATATTTTCTC+TGG | - | chr1_3:74649124-74649143 | Msa0140400:intron | 25.0% |
| ! | TATACATTACATTGAGGTTT+AGG | - | chr1_3:74649788-74649807 | Msa0140400:CDS | 25.0% |
| ! | ATTTGAAAATGCATCTTGAA+TGG | - | chr1_3:74649849-74649868 | Msa0140400:five_prime_UTR | 25.0% |
| ! | GTATAGTCACCAATTTAAAA+AGG | - | chr1_3:74649890-74649909 | Msa0140400:five_prime_UTR | 25.0% |
| ! | TACTAGTACAATAGTTTACA+AGG | + | chr1_3:74650029-74650048 | None:intergenic | 25.0% |
| GGAAGAAAAACAAAGTCAAA+TGG | - | chr1_3:74645555-74645574 | Msa0140400:three_prime_UTR | 30.0% | |
| TTGCTTAATCACACATGATT+AGG | - | chr1_3:74645668-74645687 | Msa0140400:three_prime_UTR | 30.0% | |
| TTCACAAACTTTGCTCAAAA+GGG | + | chr1_3:74645739-74645758 | None:intergenic | 30.0% | |
| ATTCACAAACTTTGCTCAAA+AGG | + | chr1_3:74645740-74645759 | None:intergenic | 30.0% | |
| AGTGGTAGAAGAAAATTCAA+AGG | - | chr1_3:74646000-74646019 | Msa0140400:CDS | 30.0% | |
| GTGGTAGAAGAAAATTCAAA+GGG | - | chr1_3:74646001-74646020 | Msa0140400:CDS | 30.0% | |
| GAAAAAACATCATTGAACAC+AGG | + | chr1_3:74646225-74646244 | None:intergenic | 30.0% | |
| CCATACAAAACCATCATAAA+AGG | + | chr1_3:74646255-74646274 | None:intergenic | 30.0% | |
| !!! | CCTTTTATGATGGTTTTGTA+TGG | - | chr1_3:74646252-74646271 | Msa0140400:CDS | 30.0% |
| GTATTTGTAAGAAACTAGCA+TGG | - | chr1_3:74646367-74646386 | Msa0140400:CDS | 30.0% | |
| AACCAAATGTCTCCAAATAA+TGG | + | chr1_3:74646443-74646462 | None:intergenic | 30.0% | |
| ! | TTTTGTCATCTCATGAAAAC+TGG | - | chr1_3:74646461-74646480 | Msa0140400:CDS | 30.0% |
| TTTGTCATCTCATGAAAACT+GGG | - | chr1_3:74646462-74646481 | Msa0140400:CDS | 30.0% | |
| ! | TTTACCCATCCATTTTCTTT+AGG | - | chr1_3:74646726-74646745 | Msa0140400:intron | 30.0% |
| ! | TTACCCATCCATTTTCTTTA+GGG | - | chr1_3:74646727-74646746 | Msa0140400:intron | 30.0% |
| ! | TATTCTAGAAGAACCTTATG+GGG | - | chr1_3:74647126-74647145 | Msa0140400:intron | 30.0% |
| AAATAATCCGATCAAAACAC+GGG | + | chr1_3:74647227-74647246 | None:intergenic | 30.0% | |
| !!! | GTGTTTTGATCGGATTATTT+TGG | - | chr1_3:74647227-74647246 | Msa0140400:intron | 30.0% |
| ! | CAGCAAGTGAAATTTTGTAT+TGG | + | chr1_3:74647282-74647301 | None:intergenic | 30.0% |
| ! | TTGCTGTTAAATTCACTCAA+GGG | - | chr1_3:74647296-74647315 | Msa0140400:intron | 30.0% |
| TAGAGAGAGAAAAGATAATC+AGG | + | chr1_3:74647355-74647374 | None:intergenic | 30.0% | |
| ! | GTAATTTGCAAGTATTATCC+AGG | - | chr1_3:74647542-74647561 | Msa0140400:intron | 30.0% |
| AAAATAAAAAAACTGCAGCC+TGG | + | chr1_3:74647563-74647582 | None:intergenic | 30.0% | |
| CAAGAACATAACCAAAGAAA+AGG | + | chr1_3:74647683-74647702 | None:intergenic | 30.0% | |
| ! | TTCTTACTCTCTTGTTTACA+GGG | + | chr1_3:74647807-74647826 | None:intergenic | 30.0% |
| ! | AACAAGAGAGTAAGAAGTAT+AGG | - | chr1_3:74647811-74647830 | Msa0140400:intron | 30.0% |
| ATGTACATCAACTTCTTACT+AGG | - | chr1_3:74647994-74648013 | Msa0140400:intron | 30.0% | |
| TGTACATCAACTTCTTACTA+GGG | - | chr1_3:74647995-74648014 | Msa0140400:intron | 30.0% | |
| !! | ATAAGGGCATAACTCAATTT+TGG | - | chr1_3:74648046-74648065 | Msa0140400:intron | 30.0% |
| !! | TAAGGGCATAACTCAATTTT+GGG | - | chr1_3:74648047-74648066 | Msa0140400:intron | 30.0% |
| !! | AAGCTCTCTAATTTTTGGAA+GGG | - | chr1_3:74648162-74648181 | Msa0140400:intron | 30.0% |
| ! | TTTTCCTTTTTCTCATTCTC+TGG | - | chr1_3:74648235-74648254 | Msa0140400:intron | 30.0% |
| ATAGAAACTGGTACCAATAT+TGG | + | chr1_3:74648331-74648350 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTCTCCCATTAAA+AGG | + | chr1_3:74648493-74648512 | None:intergenic | 30.0% |
| TTTGCTTACGTAAAAGGAAA+CGG | - | chr1_3:74648549-74648568 | Msa0140400:intron | 30.0% | |
| !!! | TCAGAATTTTTTCTGGCTAA+CGG | - | chr1_3:74648606-74648625 | Msa0140400:intron | 30.0% |
| AAAAAGCAAGATATGGATGT+TGG | - | chr1_3:74648718-74648737 | Msa0140400:intron | 30.0% | |
| ATGGAAAACAAATTTCTGCA+CGG | - | chr1_3:74648784-74648803 | Msa0140400:intron | 30.0% | |
| ! | ATGCTACTAAAATGTGGTTT+TGG | + | chr1_3:74648827-74648846 | None:intergenic | 30.0% |
| ! | TTTTTATGTCCAGAAGATGA+TGG | - | chr1_3:74648846-74648865 | Msa0140400:intron | 30.0% |
| !! | AGATGATGGAATATCAACAT+AGG | - | chr1_3:74648860-74648879 | Msa0140400:intron | 30.0% |
| !!! | CTATCTCGTATTTTTTCAAC+AGG | - | chr1_3:74649063-74649082 | Msa0140400:intron | 30.0% |
| ! | TTCAGACAACATCTCTTTTA+TGG | + | chr1_3:74649401-74649420 | None:intergenic | 30.0% |
| !! | TATCTTAGTCTTGTATGATG+AGG | - | chr1_3:74649666-74649685 | Msa0140400:CDS | 30.0% |
| AGGTCAAGAAATTTATGAAC+TGG | - | chr1_3:74649686-74649705 | Msa0140400:CDS | 30.0% | |
| GGTCAAGAAATTTATGAACT+GGG | - | chr1_3:74649687-74649706 | Msa0140400:CDS | 30.0% | |
| GTCAAGAAATTTATGAACTG+GGG | - | chr1_3:74649688-74649707 | Msa0140400:CDS | 30.0% | |
| !! | AACTGAGTTCATTTTGATAC+CGG | - | chr1_3:74649745-74649764 | Msa0140400:CDS | 30.0% |
| ACCTGTTATACATTACATTG+AGG | - | chr1_3:74649782-74649801 | Msa0140400:CDS | 30.0% | |
| ACCTCAATGTAATGTATAAC+AGG | + | chr1_3:74649786-74649805 | None:intergenic | 30.0% | |
| TGAATGGCATTTCAACTAAA+AGG | - | chr1_3:74649865-74649884 | Msa0140400:five_prime_UTR | 30.0% | |
| AGGTAGGAATTGAAATTCGT+TGG | + | chr1_3:74645586-74645605 | None:intergenic | 35.0% | |
| ! | AAGATTTTGCGGCGAATTTA+AGG | - | chr1_3:74645773-74645792 | Msa0140400:three_prime_UTR | 35.0% |
| ! | CAATTTTCAACGCGATCTTA+TGG | - | chr1_3:74645876-74645895 | Msa0140400:three_prime_UTR | 35.0% |
| AATAACTTAGCCCTCTCAAT+TGG | + | chr1_3:74645943-74645962 | None:intergenic | 35.0% | |
| GCAGACACAAGAAAGTAATT+TGG | - | chr1_3:74645966-74645985 | Msa0140400:CDS | 35.0% | |
| AATTTGGCTATTGTTGCTAG+TGG | - | chr1_3:74645982-74646001 | Msa0140400:CDS | 35.0% | |
| !! | AAGAAGGTGTTATCTCTTTG+TGG | - | chr1_3:74646055-74646074 | Msa0140400:CDS | 35.0% |
| TGCACTCAATTTCTCTCTTA+AGG | - | chr1_3:74646119-74646138 | Msa0140400:CDS | 35.0% | |
| CAAAACCATCATAAAAGGGT+GGG | + | chr1_3:74646250-74646269 | None:intergenic | 35.0% | |
| ACAAAACCATCATAAAAGGG+TGG | + | chr1_3:74646251-74646270 | None:intergenic | 35.0% | |
| !! | ATTGCTGATCCATTTTTGAC+TGG | - | chr1_3:74646295-74646314 | Msa0140400:CDS | 35.0% |
| GATATCAAGCCAGTCAAAAA+TGG | + | chr1_3:74646307-74646326 | None:intergenic | 35.0% | |
| CTGTAACAAGCACCATTATT+TGG | - | chr1_3:74646428-74646447 | Msa0140400:CDS | 35.0% | |
| CACCATTATTTGGAGACATT+TGG | - | chr1_3:74646438-74646457 | Msa0140400:CDS | 35.0% | |
| TATATTGTTTGCATACGCCA+CGG | - | chr1_3:74646693-74646712 | Msa0140400:intron | 35.0% | |
| AAGAAAATGGATGGGTAAAC+TGG | + | chr1_3:74646725-74646744 | None:intergenic | 35.0% | |
| GAACCCTAAAGAAAATGGAT+GGG | + | chr1_3:74646733-74646752 | None:intergenic | 35.0% | |
| AAGAGGAACCCTAAAGAAAA+TGG | + | chr1_3:74646738-74646757 | None:intergenic | 35.0% | |
| AAGGGCTTGATATATAAGGA+GGG | + | chr1_3:74646897-74646916 | None:intergenic | 35.0% | |
| TAAGGGCTTGATATATAAGG+AGG | + | chr1_3:74646898-74646917 | None:intergenic | 35.0% | |
| TCCTTATATATCAAGCCCTT+AGG | - | chr1_3:74646897-74646916 | Msa0140400:intron | 35.0% | |
| CCTTATATATCAAGCCCTTA+GGG | - | chr1_3:74646898-74646917 | Msa0140400:intron | 35.0% | |
| CTTGTTCTTCATTACTCTTC+TGG | - | chr1_3:74646953-74646972 | Msa0140400:intron | 35.0% | |
| TATCTTCTTGCCTTTATGTG+TGG | - | chr1_3:74647016-74647035 | Msa0140400:intron | 35.0% | |
| CTGAATCCAGAGGATTATAA+TGG | - | chr1_3:74647085-74647104 | Msa0140400:intron | 35.0% | |
| AATCCAGAGGATTATAATGG+AGG | - | chr1_3:74647088-74647107 | Msa0140400:intron | 35.0% | |
| ! | ATCCAGAGGATTATAATGGA+GGG | - | chr1_3:74647089-74647108 | Msa0140400:intron | 35.0% |
| !! | CTTGCTGTTAAATTCACTCA+AGG | - | chr1_3:74647295-74647314 | Msa0140400:intron | 35.0% |
| AAACTATTAAGAGCTCGGAA+TGG | + | chr1_3:74647410-74647429 | None:intergenic | 35.0% | |
| ! | CTTCTTACTCTCTTGTTTAC+AGG | + | chr1_3:74647808-74647827 | None:intergenic | 35.0% |
| TTTGTGCAAATAATCCCACT+TGG | - | chr1_3:74647855-74647874 | Msa0140400:intron | 35.0% | |
| ! | TCCTTTTAGCCTGAAACAAA+CGG | - | chr1_3:74647919-74647938 | Msa0140400:intron | 35.0% |
| !! | GAAGTTGATGTACATTTGAG+AGG | + | chr1_3:74647989-74648008 | None:intergenic | 35.0% |
| ! | AGACCAAGCTCTCTAATTTT+TGG | - | chr1_3:74648157-74648176 | Msa0140400:intron | 35.0% |
| CTTCCAAAAATTAGAGAGCT+TGG | + | chr1_3:74648163-74648182 | None:intergenic | 35.0% | |
| !! | CAAGCTCTCTAATTTTTGGA+AGG | - | chr1_3:74648161-74648180 | Msa0140400:intron | 35.0% |
| ACCCAAGACTCTAATTTCTT+GGG | - | chr1_3:74648189-74648208 | Msa0140400:intron | 35.0% | |
| TCCCAAGAAATTAGAGTCTT+GGG | + | chr1_3:74648193-74648212 | None:intergenic | 35.0% | |
| TTCCCAAGAAATTAGAGTCT+TGG | + | chr1_3:74648194-74648213 | None:intergenic | 35.0% | |
| CTAACCAGAGAATGAGAAAA+AGG | + | chr1_3:74648242-74648261 | None:intergenic | 35.0% | |
| GGATTACACCAAAAACAGTA+TGG | + | chr1_3:74648269-74648288 | None:intergenic | 35.0% | |
| ! | CACCTTTTAATGGGAGAAAA+AGG | - | chr1_3:74648488-74648507 | Msa0140400:intron | 35.0% |
| TTGCTTACGTAAAAGGAAAC+GGG | - | chr1_3:74648550-74648569 | Msa0140400:intron | 35.0% | |
| ATGTTGGCATCATTCTCATA+AGG | - | chr1_3:74648734-74648753 | Msa0140400:intron | 35.0% | |
| GTTGATATTCCATCATCTTC+TGG | + | chr1_3:74648858-74648877 | None:intergenic | 35.0% | |
| GCAGAACAACATCAAGAAAT+AGG | + | chr1_3:74648957-74648976 | None:intergenic | 35.0% | |
| ! | TACAAAAGCATATTAAGGGG+TGG | - | chr1_3:74649091-74649110 | Msa0140400:intron | 35.0% |
| GCTCCAGAGAAAATATTATC+AGG | + | chr1_3:74649130-74649149 | None:intergenic | 35.0% | |
| GGAATATAGTGGCTAAGAAA+TGG | + | chr1_3:74649285-74649304 | None:intergenic | 35.0% | |
| ATACACAGAGGTCTTTACTT+CGG | - | chr1_3:74649364-74649383 | Msa0140400:intron | 35.0% | |
| TGAAGAATCTAAACCTGAGT+TGG | - | chr1_3:74649417-74649436 | Msa0140400:intron | 35.0% | |
| AGGAAAATCTATCGAACAGA+GGG | - | chr1_3:74649583-74649602 | Msa0140400:CDS | 35.0% | |
| ATGAACTCAGTTAACTACGT+TGG | + | chr1_3:74649737-74649756 | None:intergenic | 35.0% | |
| CAGGTTGTAATGAAAGTAAC+CGG | + | chr1_3:74649767-74649786 | None:intergenic | 35.0% | |
| TTAGAAGCCAATGATTGATG+AGG | - | chr1_3:74649950-74649969 | Msa0140400:five_prime_UTR | 35.0% | |
| TAGAAGCCAATGATTGATGA+GGG | - | chr1_3:74649951-74649970 | Msa0140400:five_prime_UTR | 35.0% | |
| ATTACACCCTCATCAATCAT+TGG | + | chr1_3:74649960-74649979 | None:intergenic | 35.0% | |
| TGAAATGCGTGTTGTGTGTA+TGG | + | chr1_3:74645621-74645640 | None:intergenic | 40.0% | |
| GAATTTAAGGATGAGTGGAG+AGG | - | chr1_3:74645786-74645805 | Msa0140400:three_prime_UTR | 40.0% | |
| AATTGTGGCACCAATTGAGA+GGG | - | chr1_3:74645930-74645949 | Msa0140400:CDS | 40.0% | |
| ATTCGTACTGTTAGGGAAGA+AGG | - | chr1_3:74646039-74646058 | Msa0140400:CDS | 40.0% | |
| GAGAAATTGAGTGCAACAGA+AGG | + | chr1_3:74646114-74646133 | None:intergenic | 40.0% | |
| ! | TTCTTCCCACCCTTTTATGA+TGG | - | chr1_3:74646242-74646261 | Msa0140400:CDS | 40.0% |
| ATGCAGGCAATGTTGAAAAC+TGG | - | chr1_3:74646485-74646504 | Msa0140400:CDS | 40.0% | |
| AAAGAACCCTTCAACAGATG+TGG | - | chr1_3:74646609-74646628 | Msa0140400:intron | 40.0% | |
| CATCTTCCACATCTGTTGAA+GGG | + | chr1_3:74646618-74646637 | None:intergenic | 40.0% | |
| ACATCTTCCACATCTGTTGA+AGG | + | chr1_3:74646619-74646638 | None:intergenic | 40.0% | |
| GGAACCCTAAAGAAAATGGA+TGG | + | chr1_3:74646734-74646753 | None:intergenic | 40.0% | |
| ATAGGAAAATGCACCGTAGA+AGG | - | chr1_3:74646763-74646782 | Msa0140400:intron | 40.0% | |
| !! | CCTACTGTTTCTACCTTCTA+CGG | + | chr1_3:74646779-74646798 | None:intergenic | 40.0% |
| TAGAAGGTAGAAACAGTAGG+TGG | - | chr1_3:74646779-74646798 | Msa0140400:intron | 40.0% | |
| AGAAACAGTAGGTGGATACT+TGG | - | chr1_3:74646787-74646806 | Msa0140400:intron | 40.0% | |
| CCCTAAGGGCTTGATATATA+AGG | + | chr1_3:74646901-74646920 | None:intergenic | 40.0% | |
| ! | ACAACCCTTTTAGATTCTGG+GGG | + | chr1_3:74646985-74647004 | None:intergenic | 40.0% |
| ! | CACAACCCTTTTAGATTCTG+GGG | + | chr1_3:74646986-74647005 | None:intergenic | 40.0% |
| ! | CCACAACCCTTTTAGATTCT+GGG | + | chr1_3:74646987-74647006 | None:intergenic | 40.0% |
| ! | TCCACAACCCTTTTAGATTC+TGG | + | chr1_3:74646988-74647007 | None:intergenic | 40.0% |
| GAATCTAAAAGGGTTGTGGA+TGG | - | chr1_3:74646988-74647007 | Msa0140400:intron | 40.0% | |
| !! | TACTCTGAAACTGAATCCAG+AGG | - | chr1_3:74647075-74647094 | Msa0140400:intron | 40.0% |
| ATCCCTCCATTATAATCCTC+TGG | + | chr1_3:74647094-74647113 | None:intergenic | 40.0% | |
| ACTGAGGATGAATCGCTAAT+AGG | + | chr1_3:74647152-74647171 | None:intergenic | 40.0% | |
| CTTCATGGCATCACAAGTAT+GGG | + | chr1_3:74647184-74647203 | None:intergenic | 40.0% | |
| ACTTCATGGCATCACAAGTA+TGG | + | chr1_3:74647185-74647204 | None:intergenic | 40.0% | |
| TGCGGTGAAGGACAAATAAA+AGG | + | chr1_3:74647324-74647343 | None:intergenic | 40.0% | |
| CAGGAATTATAATGCGGTGA+AGG | + | chr1_3:74647336-74647355 | None:intergenic | 40.0% | |
| ATAAGGGATGGAACACTACT+AGG | + | chr1_3:74647470-74647489 | None:intergenic | 40.0% | |
| GTACCAGGGAGAAGTAATAA+GGG | + | chr1_3:74647486-74647505 | None:intergenic | 40.0% | |
| ACCTATGTCCGAGAAGAAAA+AGG | - | chr1_3:74647504-74647523 | Msa0140400:intron | 40.0% | |
| ! | ACCTTTTTCTTCTCGGACAT+AGG | + | chr1_3:74647508-74647527 | None:intergenic | 40.0% |
| CTTTAGCCCTTTCACTGATA+GGG | - | chr1_3:74647651-74647670 | Msa0140400:intron | 40.0% | |
| TTTAGCCCTTTCACTGATAG+GGG | - | chr1_3:74647652-74647671 | Msa0140400:intron | 40.0% | |
| CAAGGTCAGATTTCGGTATA+GGG | + | chr1_3:74647784-74647803 | None:intergenic | 40.0% | |
| ! | CCTTTTAGCCTGAAACAAAC+GGG | - | chr1_3:74647920-74647939 | Msa0140400:intron | 40.0% |
| GACCCAAGACTCTAATTTCT+TGG | - | chr1_3:74648188-74648207 | Msa0140400:intron | 40.0% | |
| AAAAAGGAACTGATGCATCG+TGG | - | chr1_3:74648504-74648523 | Msa0140400:intron | 40.0% | |
| AAAAGGAACTGATGCATCGT+GGG | - | chr1_3:74648505-74648524 | Msa0140400:intron | 40.0% | |
| TGCTTACGTAAAAGGAAACG+GGG | - | chr1_3:74648551-74648570 | Msa0140400:intron | 40.0% | |
| ! | GCATTGACATAGATCAGTTG+CGG | + | chr1_3:74648935-74648954 | None:intergenic | 40.0% |
| ! | AAAAGCATATTAAGGGGTGG+AGG | - | chr1_3:74649094-74649113 | Msa0140400:intron | 40.0% |
| !! | TGGAGCATCAGCTAATTTTG+TGG | - | chr1_3:74649144-74649163 | Msa0140400:intron | 40.0% |
| AGGTTGTACATCACTCATCT+TGG | - | chr1_3:74649180-74649199 | Msa0140400:intron | 40.0% | |
| CTAAGAAATGGTGAATGCCT+CGG | + | chr1_3:74649273-74649292 | None:intergenic | 40.0% | |
| GCCACTATATTCCAGAAAGA+CGG | - | chr1_3:74649292-74649311 | Msa0140400:intron | 40.0% | |
| CCACTATATTCCAGAAAGAC+GGG | - | chr1_3:74649293-74649312 | Msa0140400:intron | 40.0% | |
| CACTATATTCCAGAAAGACG+GGG | - | chr1_3:74649294-74649313 | Msa0140400:intron | 40.0% | |
| GAGGAAAATCTATCGAACAG+AGG | - | chr1_3:74649582-74649601 | Msa0140400:CDS | 40.0% | |
| !! | GGATTGATTTCGTTTTACCG+CGG | - | chr1_3:74649604-74649623 | Msa0140400:CDS | 40.0% |
| GAGCAGTTTCGAATGTGTTT+AGG | - | chr1_3:74649626-74649645 | Msa0140400:CDS | 40.0% | |
| ! | CTCAGTTAACTACGTTGGTT+TGG | + | chr1_3:74649732-74649751 | None:intergenic | 40.0% |
| AATGCGTGTTGTGTGTATGG+TGG | + | chr1_3:74645618-74645637 | None:intergenic | 45.0% | |
| TTTCAACGCGATCTTATGGC+TGG | - | chr1_3:74645880-74645899 | Msa0140400:three_prime_UTR | 45.0% | |
| TGGTGCGGTTCATACAATTG+TGG | - | chr1_3:74645915-74645934 | Msa0140400:CDS | 45.0% | |
| CAATTGTGGCACCAATTGAG+AGG | - | chr1_3:74645929-74645948 | Msa0140400:CDS | 45.0% | |
| ATCTCTTTGTGGCGTGGTAA+TGG | - | chr1_3:74646066-74646085 | Msa0140400:CDS | 45.0% | |
| TCTCTTTGTGGCGTGGTAAT+GGG | - | chr1_3:74646067-74646086 | Msa0140400:CDS | 45.0% | |
| AACTAGCATGGCTTGAGAAG+AGG | - | chr1_3:74646379-74646398 | Msa0140400:CDS | 45.0% | |
| ACTAGCATGGCTTGAGAAGA+GGG | - | chr1_3:74646380-74646399 | Msa0140400:CDS | 45.0% | |
| TCTCATGAAAACTGGGATGC+AGG | - | chr1_3:74646469-74646488 | Msa0140400:CDS | 45.0% | |
| GGTTGTGTATGCTGTCAACT+AGG | - | chr1_3:74646506-74646525 | Msa0140400:CDS | 45.0% | |
| TATGCTGTCAACTAGGCAGT+TGG | - | chr1_3:74646513-74646532 | Msa0140400:CDS | 45.0% | |
| ATGGATACTCTCGTACCATG+AGG | + | chr1_3:74646660-74646679 | None:intergenic | 45.0% | |
| ! | TACGGTGCATTTTCCTATCG+CGG | + | chr1_3:74646761-74646780 | None:intergenic | 45.0% |
| CCGTAGAAGGTAGAAACAGT+AGG | - | chr1_3:74646776-74646795 | Msa0140400:intron | 45.0% | |
| CAGTAGGTGGATACTTGGAA+AGG | - | chr1_3:74646792-74646811 | Msa0140400:intron | 45.0% | |
| TCCGACGCTCAAGTCAATTA+GGG | - | chr1_3:74646818-74646837 | Msa0140400:intron | 45.0% | |
| !! | ACCCTAATTGACTTGAGCGT+CGG | + | chr1_3:74646822-74646841 | None:intergenic | 45.0% |
| GCCTATGCAATACTCCCTAA+GGG | + | chr1_3:74646915-74646934 | None:intergenic | 45.0% | |
| AGCCTATGCAATACTCCCTA+AGG | + | chr1_3:74646916-74646935 | None:intergenic | 45.0% | |
| TGCATCCCCCAGAATCTAAA+AGG | - | chr1_3:74646977-74646996 | Msa0140400:intron | 45.0% | |
| GCATCCCCCAGAATCTAAAA+GGG | - | chr1_3:74646978-74646997 | Msa0140400:intron | 45.0% | |
| CCCAGAATCTAAAAGGGTTG+TGG | - | chr1_3:74646984-74647003 | Msa0140400:intron | 45.0% | |
| TCTAAAAGGGTTGTGGATGG+TGG | - | chr1_3:74646991-74647010 | Msa0140400:intron | 45.0% | |
| CGGTGATTGTCACACAATCA+CGG | + | chr1_3:74647048-74647067 | None:intergenic | 45.0% | |
| CGTGATTGTGTGACAATCAC+CGG | - | chr1_3:74647046-74647065 | Msa0140400:intron | 45.0% | |
| GTGATTGTGTGACAATCACC+GGG | - | chr1_3:74647047-74647066 | Msa0140400:intron | 45.0% | |
| TGATTGTGTGACAATCACCG+GGG | - | chr1_3:74647048-74647067 | Msa0140400:intron | 45.0% | |
| ! | CAGTTTCAGAGTATCTTCCC+CGG | + | chr1_3:74647068-74647087 | None:intergenic | 45.0% |
| AATCGCTAATAGGCCCCATA+AGG | + | chr1_3:74647142-74647161 | None:intergenic | 45.0% | |
| TGGCATCACAAGTATGGGAT+GGG | + | chr1_3:74647179-74647198 | None:intergenic | 45.0% | |
| ATGGCATCACAAGTATGGGA+TGG | + | chr1_3:74647180-74647199 | None:intergenic | 45.0% | |
| ACTTGTGATGCCATGAAGTG+AGG | - | chr1_3:74647186-74647205 | Msa0140400:intron | 45.0% | |
| CTTGTGATGCCATGAAGTGA+GGG | - | chr1_3:74647187-74647206 | Msa0140400:intron | 45.0% | |
| ! | GCTTTAGTTCCCTCACTTCA+TGG | + | chr1_3:74647199-74647218 | None:intergenic | 45.0% |
| CAGGGAGAAGTAATAAGGGA+TGG | + | chr1_3:74647482-74647501 | None:intergenic | 45.0% | |
| CATCCCTTATTACTTCTCCC+TGG | - | chr1_3:74647480-74647499 | Msa0140400:intron | 45.0% | |
| GGTACCAGGGAGAAGTAATA+AGG | + | chr1_3:74647487-74647506 | None:intergenic | 45.0% | |
| CCTATCAGTGAAAGGGCTAA+AGG | + | chr1_3:74647653-74647672 | None:intergenic | 45.0% | |
| CCTTTAGCCCTTTCACTGAT+AGG | - | chr1_3:74647650-74647669 | Msa0140400:intron | 45.0% | |
| TTAGCCCTTTCACTGATAGG+GGG | - | chr1_3:74647653-74647672 | Msa0140400:intron | 45.0% | |
| AAGTCCCCCTATCAGTGAAA+GGG | + | chr1_3:74647660-74647679 | None:intergenic | 45.0% | |
| ! | TAGGGGGACTTCCTTTTCTT+TGG | - | chr1_3:74647669-74647688 | Msa0140400:intron | 45.0% |
| TTTCGGTATAGGGATGGAGA+AGG | + | chr1_3:74647774-74647793 | None:intergenic | 45.0% | |
| GTCAGATTTCGGTATAGGGA+TGG | + | chr1_3:74647780-74647799 | None:intergenic | 45.0% | |
| GCAAGGTCAGATTTCGGTAT+AGG | + | chr1_3:74647785-74647804 | None:intergenic | 45.0% | |
| TACAGGGCAAGGTCAGATTT+CGG | + | chr1_3:74647791-74647810 | None:intergenic | 45.0% | |
| ! | ACTCTCTTGTTTACAGGGCA+AGG | + | chr1_3:74647802-74647821 | None:intergenic | 45.0% |
| TCCCACTTGGAGTGATTTCA+AGG | - | chr1_3:74647868-74647887 | Msa0140400:intron | 45.0% | |
| GCCTTGAAATCACTCCAAGT+GGG | + | chr1_3:74647872-74647891 | None:intergenic | 45.0% | |
| AGCCTTGAAATCACTCCAAG+TGG | + | chr1_3:74647873-74647892 | None:intergenic | 45.0% | |
| CCCGTTTGTTTCAGGCTAAA+AGG | + | chr1_3:74647923-74647942 | None:intergenic | 45.0% | |
| GGGCAATTTGAATTGTGTGC+TGG | - | chr1_3:74647962-74647981 | Msa0140400:intron | 45.0% | |
| GCACGGAAGTTTGTGAAATG+TGG | - | chr1_3:74648801-74648820 | Msa0140400:intron | 45.0% | |
| ! | GCATCAGCTAATTTTGTGGC+TGG | - | chr1_3:74649148-74649167 | Msa0140400:intron | 45.0% |
| !! | CCCGTCTTTCTGGAATATAG+TGG | + | chr1_3:74649296-74649315 | None:intergenic | 45.0% |
| TATTCCAGAAAGACGGGGTA+CGG | - | chr1_3:74649299-74649318 | Msa0140400:intron | 45.0% | |
| TCCTGCATCACTACATGGTA+TGG | - | chr1_3:74649339-74649358 | Msa0140400:intron | 45.0% | |
| ACCATACCATGTAGTGATGC+AGG | + | chr1_3:74649343-74649362 | None:intergenic | 45.0% | |
| CATGGTATGGTGATACACAG+AGG | - | chr1_3:74649352-74649371 | Msa0140400:intron | 45.0% | |
| ACAGAGGTCTTTACTTCGGA+GGG | - | chr1_3:74649368-74649387 | Msa0140400:intron | 45.0% | |
| ! | TAGCGGATATGATACCAGAC+CGG | + | chr1_3:74649488-74649507 | None:intergenic | 45.0% |
| ! | AATGATGATGCAGTCTGGCA+TGG | - | chr1_3:74649525-74649544 | Msa0140400:CDS | 45.0% |
| ! | TCGAATGTGTTTAGGAGCAC+TGG | - | chr1_3:74649634-74649653 | Msa0140400:CDS | 45.0% |
| AGCAAATATTGTCATGGCCG+AGG | - | chr1_3:74649920-74649939 | Msa0140400:five_prime_UTR | 45.0% | |
| GCAAATATTGTCATGGCCGA+GGG | - | chr1_3:74649921-74649940 | Msa0140400:five_prime_UTR | 45.0% | |
| TGGCTTCTAATCTAGTCCCT+CGG | + | chr1_3:74649940-74649959 | None:intergenic | 45.0% | |
| TGTTGTGTGTATGGTGGCTG+CGG | + | chr1_3:74645612-74645631 | None:intergenic | 50.0% | |
| GCGGCGAATTTAAGGATGAG+TGG | - | chr1_3:74645781-74645800 | Msa0140400:three_prime_UTR | 50.0% | |
| ! | GGTGTTATCTCTTTGTGGCG+TGG | - | chr1_3:74646060-74646079 | Msa0140400:CDS | 50.0% |
| AGAAGAGGGATGACGAGAGT+TGG | - | chr1_3:74646394-74646413 | Msa0140400:CDS | 50.0% | |
| ! | GCATTTTCCTATCGCGGAAG+AGG | + | chr1_3:74646755-74646774 | None:intergenic | 50.0% |
| CTCCGACGCTCAAGTCAATT+AGG | - | chr1_3:74646817-74646836 | Msa0140400:intron | 50.0% | |
| !! | GCCCTTAGGGAGTATTGCAT+AGG | - | chr1_3:74646911-74646930 | Msa0140400:intron | 50.0% |
| TTGTCACACAATCACGGCCA+CGG | + | chr1_3:74647042-74647061 | None:intergenic | 50.0% | |
| TCCGATCAAAACACGGGTCA+GGG | + | chr1_3:74647221-74647240 | None:intergenic | 50.0% | |
| ATCCGATCAAAACACGGGTC+AGG | + | chr1_3:74647222-74647241 | None:intergenic | 50.0% | |
| GCTCGGAATGGTGAACTTGA+TGG | + | chr1_3:74647398-74647417 | None:intergenic | 50.0% | |
| GGATGGAACACTACTAGGCA+AGG | + | chr1_3:74647465-74647484 | None:intergenic | 50.0% | |
| CTTCTCGGACATAGGTACCA+GGG | + | chr1_3:74647500-74647519 | None:intergenic | 50.0% | |
| TCTTCTCGGACATAGGTACC+AGG | + | chr1_3:74647501-74647520 | None:intergenic | 50.0% | |
| GAAGTCCCCCTATCAGTGAA+AGG | + | chr1_3:74647661-74647680 | None:intergenic | 50.0% | |
| CAGTCAGCATTGCAAACAGC+AGG | + | chr1_3:74647732-74647751 | None:intergenic | 50.0% | |
| TTAGCCTGAAACAAACGGGC+AGG | - | chr1_3:74647924-74647943 | Msa0140400:intron | 50.0% | |
| TAGCCTGAAACAAACGGGCA+GGG | - | chr1_3:74647925-74647944 | Msa0140400:intron | 50.0% | |
| ACCAGTCGTCGCAACTATCA+TGG | - | chr1_3:74648071-74648090 | Msa0140400:intron | 50.0% | |
| TCCATGATAGTTGCGACGAC+TGG | + | chr1_3:74648075-74648094 | None:intergenic | 50.0% | |
| !! | AAACGGGGCACTTTTCAGTC+AGG | - | chr1_3:74648566-74648585 | Msa0140400:intron | 50.0% |
| GGGTGTGTGCAATATCAAGG+GGG | + | chr1_3:74649210-74649229 | None:intergenic | 50.0% | |
| CGGGTGTGTGCAATATCAAG+GGG | + | chr1_3:74649211-74649230 | None:intergenic | 50.0% | |
| GCGGGTGTGTGCAATATCAA+GGG | + | chr1_3:74649212-74649231 | None:intergenic | 50.0% | |
| TTCCAATGTCAGCAGCAAGG+CGG | + | chr1_3:74649231-74649250 | None:intergenic | 50.0% | |
| TCCTTCCAATGTCAGCAGCA+AGG | + | chr1_3:74649234-74649253 | None:intergenic | 50.0% | |
| TGCTGCTGACATTGGAAGGA+CGG | - | chr1_3:74649234-74649253 | Msa0140400:intron | 50.0% | |
| ATTCCAGAAAGACGGGGTAC+GGG | - | chr1_3:74649300-74649319 | Msa0140400:intron | 50.0% | |
| GGTCTTCCTGCATCACTACA+TGG | - | chr1_3:74649334-74649353 | Msa0140400:intron | 50.0% | |
| CACAGAGGTCTTTACTTCGG+AGG | - | chr1_3:74649367-74649386 | Msa0140400:intron | 50.0% | |
| ! | CTAAACCTGAGTTGGCGTTG+TGG | - | chr1_3:74649425-74649444 | Msa0140400:intron | 50.0% |
| CAAGCAGTTACAACCTCAGC+CGG | - | chr1_3:74649466-74649485 | Msa0140400:intron | 50.0% | |
| ATATGATACCAGACCGGCTG+AGG | + | chr1_3:74649482-74649501 | None:intergenic | 50.0% | |
| ATCCGCTAGACACAGTTCGT+CGG | - | chr1_3:74649500-74649519 | Msa0140400:CDS | 50.0% | |
| ! | CGGAGAATGATGATGCAGTC+TGG | - | chr1_3:74649520-74649539 | Msa0140400:CDS | 50.0% |
| !! | TCGAGGGTGCTATTGTACAC+CGG | + | chr1_3:74649556-74649575 | None:intergenic | 50.0% |
| ! | GATTTTCCTCCAGCAGTCGA+GGG | + | chr1_3:74649572-74649591 | None:intergenic | 50.0% |
| ! | AGATTTTCCTCCAGCAGTCG+AGG | + | chr1_3:74649573-74649592 | None:intergenic | 50.0% |
| ACACATTCGAAACTGCTCCG+CGG | + | chr1_3:74649624-74649643 | None:intergenic | 50.0% | |
| ACGCGATCTTATGGCTGGTG+CGG | - | chr1_3:74645885-74645904 | Msa0140400:three_prime_UTR | 55.0% | |
| TCTTATGGCTGGTGCGGTGA+TGG | - | chr1_3:74645891-74645910 | Msa0140400:three_prime_UTR | 55.0% | |
| CTTATGGCTGGTGCGGTGAT+GGG | - | chr1_3:74645892-74645911 | Msa0140400:three_prime_UTR | 55.0% | |
| TAGGGTTCCTCTTCCGCGAT+AGG | - | chr1_3:74646745-74646764 | Msa0140400:intron | 55.0% | |
| CTTGCCTTTATGTGTGGCCG+TGG | - | chr1_3:74647022-74647041 | Msa0140400:intron | 55.0% | |
| !! | GTATGGGATGGGCTAGACTG+AGG | + | chr1_3:74647168-74647187 | None:intergenic | 55.0% |
| !!! | GCCCTGACCCGTGTTTTGAT+CGG | - | chr1_3:74647217-74647236 | Msa0140400:intron | 55.0% |
| ! | AGGGCTAAAGGTGTGCATGC+TGG | + | chr1_3:74647641-74647660 | None:intergenic | 55.0% |
| GGGCAGGGAGGAAGAATACT+GGG | - | chr1_3:74647940-74647959 | Msa0140400:intron | 55.0% | |
| GGCAGGGAGGAAGAATACTG+GGG | - | chr1_3:74647941-74647960 | Msa0140400:intron | 55.0% | |
| GCAGGGAGGAAGAATACTGG+GGG | - | chr1_3:74647942-74647961 | Msa0140400:intron | 55.0% | |
| GAACTGATGCATCGTGGGCT+AGG | - | chr1_3:74648510-74648529 | Msa0140400:intron | 55.0% | |
| !! | GGGGCACTTTTCAGTCAGGT+GGG | - | chr1_3:74648570-74648589 | Msa0140400:intron | 55.0% |
| GGCGGGTGTGTGCAATATCA+AGG | + | chr1_3:74649213-74649232 | None:intergenic | 55.0% | |
| TCCAATGTCAGCAGCAAGGC+GGG | + | chr1_3:74649230-74649249 | None:intergenic | 55.0% | |
| GCCTTGCTGCTGACATTGGA+AGG | - | chr1_3:74649230-74649249 | Msa0140400:intron | 55.0% | |
| ! | ACGGAAGTGCGTCAATTCCG+AGG | - | chr1_3:74649253-74649272 | Msa0140400:intron | 55.0% |
| TTCCAGAAAGACGGGGTACG+GGG | - | chr1_3:74649301-74649320 | Msa0140400:intron | 55.0% | |
| AGTTGGCGTTGTGGAAGCGA+TGG | - | chr1_3:74649434-74649453 | Msa0140400:intron | 55.0% | |
| AGTTACAACCTCAGCCGGTC+TGG | - | chr1_3:74649471-74649490 | Msa0140400:intron | 55.0% | |
| CTCCGACGAACTGTGTCTAG+CGG | + | chr1_3:74649505-74649524 | None:intergenic | 55.0% | |
| GCAGTCTGGCATGGAACATC+CGG | - | chr1_3:74649534-74649553 | Msa0140400:CDS | 55.0% | |
| ACAATAGCACCCTCGACTGC+TGG | - | chr1_3:74649560-74649579 | Msa0140400:CDS | 55.0% | |
| ATGGTGGCTGCGGACAAGGT+AGG | + | chr1_3:74645602-74645621 | None:intergenic | 60.0% | |
| GTGTATGGTGGCTGCGGACA+AGG | + | chr1_3:74645606-74645625 | None:intergenic | 60.0% | |
| !! | GGGTAAACTGGTGCTGACCG+TGG | + | chr1_3:74646713-74646732 | None:intergenic | 60.0% |
| ACGGCCACGGCCACACATAA+AGG | + | chr1_3:74647029-74647048 | None:intergenic | 60.0% | |
| CCTCCCTGCCCGTTTGTTTC+AGG | + | chr1_3:74647931-74647950 | None:intergenic | 60.0% | |
| CCTGAAACAAACGGGCAGGG+AGG | - | chr1_3:74647928-74647947 | Msa0140400:intron | 60.0% | |
| CGGGCAGGGAGGAAGAATAC+TGG | - | chr1_3:74647939-74647958 | Msa0140400:intron | 60.0% | |
| !! | GCATCGTGGGCTAGGCATCT+TGG | - | chr1_3:74648518-74648537 | Msa0140400:intron | 60.0% |
| !! | CGGGGCACTTTTCAGTCAGG+TGG | - | chr1_3:74648569-74648588 | Msa0140400:intron | 60.0% |
| TTTGTGGCTGGAGCTGCAGC+AGG | - | chr1_3:74649160-74649179 | Msa0140400:intron | 60.0% | |
| ACCCGCCTTGCTGCTGACAT+TGG | - | chr1_3:74649226-74649245 | Msa0140400:intron | 60.0% | |
| TCCAGAAAGACGGGGTACGG+GGG | - | chr1_3:74649302-74649321 | Msa0140400:intron | 60.0% | |
| ACGGGGTACGGGGGATTTAC+AGG | - | chr1_3:74649311-74649330 | Msa0140400:intron | 60.0% | |
| CGGGGTACGGGGGATTTACA+GGG | - | chr1_3:74649312-74649331 | Msa0140400:intron | 60.0% | |
| GGGGTACGGGGGATTTACAG+GGG | - | chr1_3:74649313-74649332 | Msa0140400:intron | 60.0% | |
| CGCTTCCACAACGCCAACTC+AGG | + | chr1_3:74649433-74649452 | None:intergenic | 60.0% | |
| GGCGTTGTGGAAGCGATGGA+TGG | - | chr1_3:74649438-74649457 | Msa0140400:intron | 60.0% | |
| ATAGCACCCTCGACTGCTGG+AGG | - | chr1_3:74649563-74649582 | Msa0140400:CDS | 60.0% | |
| !! | ATGGCTGGTGCGGTGATGGG+TGG | - | chr1_3:74645895-74645914 | Msa0140400:exon | 65.0% |
| !! | TGGTGCGGTGATGGGTGGTG+CGG | - | chr1_3:74645900-74645919 | Msa0140400:exon | 65.0% |
| TCCCCCGTACCCCGTCTTTC+TGG | + | chr1_3:74649306-74649325 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 74645549 | 74650084 | 74645549 | ID=Msa0140400;Name=Msa0140400 |
| chr1_3 | mRNA | 74645549 | 74650084 | 74645549 | ID=Msa0140400-mRNA-1;Parent=Msa0140400;Name=Msa0140400-mRNA-1;_AED=0.01;_eAED=0.01;_QI=247|1|1|1|1|1|2|364|326 |
| chr1_3 | exon | 74645549 | 74646548 | 74645549 | ID=Msa0140400-mRNA-1:exon:26027;Parent=Msa0140400-mRNA-1 |
| chr1_3 | exon | 74649493 | 74650084 | 74649493 | ID=Msa0140400-mRNA-1:exon:26026;Parent=Msa0140400-mRNA-1 |
| chr1_3 | five_prime_UTR | 74649838 | 74650084 | 74649838 | ID=Msa0140400-mRNA-1:five_prime_utr;Parent=Msa0140400-mRNA-1 |
| chr1_3 | CDS | 74649493 | 74649837 | 74649493 | ID=Msa0140400-mRNA-1:cds;Parent=Msa0140400-mRNA-1 |
| chr1_3 | CDS | 74645913 | 74646548 | 74645913 | ID=Msa0140400-mRNA-1:cds;Parent=Msa0140400-mRNA-1 |
| chr1_3 | three_prime_UTR | 74645549 | 74645912 | 74645549 | ID=Msa0140400-mRNA-1:three_prime_utr;Parent=Msa0140400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
