Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383350 | XP_003603158.1 | 98.476 | 328 | 1 | 3 | 1 | 326 | 1 | 326 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383350 | sp|Q9FM86|ADT5_ARATH | 75.915 | 328 | 73 | 3 | 1 | 324 | 3 | 328 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383350 | G7J7N8 | 98.476 | 328 | 1 | 3 | 1 | 326 | 1 | 326 | 0.0 | 652 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1383350 | -0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa0006880 | Msa1383350 | 0.831373 | 1.732049e-55 | -8.615850e-47 |
| Msa0007850 | Msa1383350 | 0.843169 | 1.653321e-58 | -8.615850e-47 |
| Msa0017320 | Msa1383350 | 0.800570 | 1.354868e-48 | -8.615850e-47 |
| Msa0026660 | Msa1383350 | 0.828813 | 7.295439e-55 | -8.615850e-47 |
| Msa0027580 | Msa1383350 | 0.827670 | 1.376373e-54 | -8.615850e-47 |
| Msa0029260 | Msa1383350 | 0.823045 | 1.710938e-53 | -8.615850e-47 |
| Msa0033880 | Msa1383350 | 0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0036370 | Msa1383350 | 0.828604 | 8.196047e-55 | -8.615850e-47 |
| Msa0047250 | Msa1383350 | 0.800395 | 1.470591e-48 | -8.615850e-47 |
| Msa0055150 | Msa1383350 | 0.832122 | 1.131861e-55 | -8.615850e-47 |
| Msa0056270 | Msa1383350 | 0.819223 | 1.300361e-52 | -8.615850e-47 |
| Msa0061970 | Msa1383350 | 0.801605 | 8.320321e-49 | -8.615850e-47 |
| Msa0065010 | Msa1383350 | 0.804074 | 2.571779e-49 | -8.615850e-47 |
| Msa0065650 | Msa1383350 | 0.822859 | 1.890686e-53 | -8.615850e-47 |
| Msa0072170 | Msa1383350 | 0.802569 | 5.272427e-49 | -8.615850e-47 |
| Msa0075340 | Msa1383350 | 0.827810 | 1.273925e-54 | -8.615850e-47 |
| Msa0076780 | Msa1383350 | 0.811422 | 7.055758e-51 | -8.615850e-47 |
| Msa0077010 | Msa1383350 | 0.800158 | 1.643168e-48 | -8.615850e-47 |
| Msa0077900 | Msa1383350 | 0.800647 | 1.306635e-48 | -8.615850e-47 |
| Msa0090030 | Msa1383350 | 0.851802 | 6.998654e-61 | -8.615850e-47 |
| Msa0092170 | Msa1383350 | 0.801643 | 8.172730e-49 | -8.615850e-47 |
| Msa0094920 | Msa1383350 | 0.831641 | 1.487863e-55 | -8.615850e-47 |
| Msa0097950 | Msa1383350 | 0.801387 | 9.221353e-49 | -8.615850e-47 |
| Msa0100800 | Msa1383350 | 0.833175 | 6.201481e-56 | -8.615850e-47 |
| Msa0120540 | Msa1383350 | 0.800437 | 1.442202e-48 | -8.615850e-47 |
| Msa1350690 | Msa1383350 | 0.822269 | 2.592281e-53 | -8.615850e-47 |
| Msa1355700 | Msa1383350 | 0.837486 | 5.052082e-57 | -8.615850e-47 |
| Msa1363700 | Msa1383350 | 0.838623 | 2.575865e-57 | -8.615850e-47 |
| Msa1364060 | Msa1383350 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
| Msa1365860 | Msa1383350 | 0.822832 | 1.917954e-53 | -8.615850e-47 |
| Msa1371090 | Msa1383350 | 0.838540 | 2.706366e-57 | -8.615850e-47 |
| Msa1372310 | Msa1383350 | 0.807185 | 5.719730e-50 | -8.615850e-47 |
| Msa1382020 | Msa1383350 | 0.808797 | 2.595638e-50 | -8.615850e-47 |
| Msa1383350 | Msa1425340 | 0.802279 | 6.049144e-49 | -8.615850e-47 |
| Msa1383350 | Msa1426920 | 0.993466 | 6.256123e-200 | -8.615850e-47 |
| Msa1383350 | Msa1433600 | 0.808881 | 2.490396e-50 | -8.615850e-47 |
| Msa1383350 | Msa1447890 | 0.802750 | 4.837189e-49 | -8.615850e-47 |
| Msa1383350 | Msa1452470 | 0.800332 | 1.514658e-48 | -8.615850e-47 |
| Msa1383350 | Msa1463600 | 0.826970 | 2.024753e-54 | -8.615850e-47 |
| Msa0603670 | Msa1383350 | 0.810742 | 9.910150e-51 | -8.615850e-47 |
| Msa0606810 | Msa1383350 | 0.806432 | 8.248122e-50 | -8.615850e-47 |
| Msa0609000 | Msa1383350 | 0.805090 | 1.578631e-49 | -8.615850e-47 |
| Msa0610390 | Msa1383350 | 0.815321 | 9.816189e-52 | -8.615850e-47 |
| Msa0614990 | Msa1383350 | 0.815872 | 7.400414e-52 | -8.615850e-47 |
| Msa0615680 | Msa1383350 | 0.800614 | 1.327027e-48 | -8.615850e-47 |
| Msa0618200 | Msa1383350 | -0.813750 | 2.185085e-51 | -8.615850e-47 |
| Msa0618930 | Msa1383350 | 0.804092 | 2.549532e-49 | -8.615850e-47 |
| Msa0619920 | Msa1383350 | 0.802842 | 4.630305e-49 | -8.615850e-47 |
| Msa0620330 | Msa1383350 | 0.815769 | 7.800720e-52 | -8.615850e-47 |
| Msa0626940 | Msa1383350 | 0.835750 | 1.398722e-56 | -8.615850e-47 |
| Msa0628290 | Msa1383350 | 0.806116 | 9.615109e-50 | -8.615850e-47 |
| Msa0630950 | Msa1383350 | 0.818191 | 2.229610e-52 | -8.615850e-47 |
| Msa0646130 | Msa1383350 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa0649410 | Msa1383350 | 0.800544 | 1.371550e-48 | -8.615850e-47 |
| Msa0650920 | Msa1383350 | 0.804188 | 2.434794e-49 | -8.615850e-47 |
| Msa0652300 | Msa1383350 | 0.807187 | 5.712708e-50 | -8.615850e-47 |
| Msa0654620 | Msa1383350 | 0.809895 | 1.509150e-50 | -8.615850e-47 |
| Msa0654870 | Msa1383350 | 0.816869 | 4.427646e-52 | -8.615850e-47 |
| Msa0665080 | Msa1383350 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
| Msa0668460 | Msa1383350 | -0.808452 | 3.076277e-50 | -8.615850e-47 |
| Msa0669720 | Msa1383350 | 0.833056 | 6.639025e-56 | -8.615850e-47 |
| Msa0669760 | Msa1383350 | 0.818787 | 1.633313e-52 | -8.615850e-47 |
| Msa0679550 | Msa1383350 | 0.809557 | 1.784302e-50 | -8.615850e-47 |
| Msa0693790 | Msa1383350 | 0.824572 | 7.508177e-54 | -8.615850e-47 |
| Msa0694840 | Msa1383350 | 0.833728 | 4.514717e-56 | -8.615850e-47 |
| Msa0701100 | Msa1383350 | 0.800347 | 1.503782e-48 | -8.615850e-47 |
| Msa0706390 | Msa1383350 | 0.819173 | 1.334279e-52 | -8.615850e-47 |
| Msa0707390 | Msa1383350 | 0.819705 | 1.009394e-52 | -8.615850e-47 |
| Msa0711490 | Msa1383350 | 0.825014 | 5.906027e-54 | -8.615850e-47 |
| Msa0720370 | Msa1383350 | 0.812861 | 3.425548e-51 | -8.615850e-47 |
| Msa0726080 | Msa1383350 | 0.801720 | 7.881864e-49 | -8.615850e-47 |
| Msa0736570 | Msa1383350 | 0.809644 | 1.708559e-50 | -8.615850e-47 |
| Msa0751010 | Msa1383350 | 0.805313 | 1.417779e-49 | -8.615850e-47 |
| Msa0756930 | Msa1383350 | 0.822103 | 2.833222e-53 | -8.615850e-47 |
| Msa0774750 | Msa1383350 | 0.815053 | 1.125625e-51 | -8.615850e-47 |
| Msa0780880 | Msa1383350 | 0.817206 | 3.718055e-52 | -8.615850e-47 |
| Msa0781710 | Msa1383350 | 0.813656 | 2.292263e-51 | -8.615850e-47 |
| Msa0793390 | Msa1383350 | 0.806765 | 7.015824e-50 | -8.615850e-47 |
| Msa0794050 | Msa1383350 | 0.817405 | 3.354165e-52 | -8.615850e-47 |
| Msa0795660 | Msa1383350 | 0.800163 | 1.639405e-48 | -8.615850e-47 |
| Msa0805500 | Msa1383350 | 0.809033 | 2.311366e-50 | -8.615850e-47 |
| Msa0812060 | Msa1383350 | 0.821828 | 3.280022e-53 | -8.615850e-47 |
| Msa0814250 | Msa1383350 | 0.820722 | 5.902893e-53 | -8.615850e-47 |
| Msa0818770 | Msa1383350 | 0.820153 | 7.971082e-53 | -8.615850e-47 |
| Msa0820530 | Msa1383350 | -0.806055 | 9.905177e-50 | -8.615850e-47 |
| Msa0822170 | Msa1383350 | 0.805061 | 1.600815e-49 | -8.615850e-47 |
| Msa0825270 | Msa1383350 | 0.803221 | 3.865709e-49 | -8.615850e-47 |
| Msa0836500 | Msa1383350 | 0.800139 | 1.657770e-48 | -8.615850e-47 |
| Msa0839200 | Msa1383350 | 0.805203 | 1.495046e-49 | -8.615850e-47 |
| Msa0126840 | Msa1383350 | 0.805842 | 1.098042e-49 | -8.615850e-47 |
| Msa0126880 | Msa1383350 | 0.842392 | 2.660194e-58 | -8.615850e-47 |
| Msa0127040 | Msa1383350 | 0.856510 | 3.064130e-62 | -8.615850e-47 |
| Msa0127850 | Msa1383350 | 0.815913 | 7.246238e-52 | -8.615850e-47 |
| Msa0131450 | Msa1383350 | 0.820981 | 5.146599e-53 | -8.615850e-47 |
| Msa0138160 | Msa1383350 | 0.841526 | 4.503920e-58 | -8.615850e-47 |
| Msa0140400 | Msa1383350 | 0.848421 | 6.196314e-60 | -8.615850e-47 |
| Msa0145150 | Msa1383350 | 0.841992 | 3.393143e-58 | -8.615850e-47 |
| Msa0146080 | Msa1383350 | 0.800903 | 1.158701e-48 | -8.615850e-47 |
| Msa0166750 | Msa1383350 | 0.823996 | 1.025217e-53 | -8.615850e-47 |
| Msa0169300 | Msa1383350 | 0.818662 | 1.743663e-52 | -8.615850e-47 |
| Msa0171980 | Msa1383350 | 0.827097 | 1.888508e-54 | -8.615850e-47 |
| Msa0174000 | Msa1383350 | 0.820415 | 6.941796e-53 | -8.615850e-47 |
| Msa0175200 | Msa1383350 | 0.804693 | 1.910699e-49 | -8.615850e-47 |
| Msa0177230 | Msa1383350 | 0.816785 | 4.623681e-52 | -8.615850e-47 |
| Msa0177270 | Msa1383350 | 0.811968 | 5.368307e-51 | -8.615850e-47 |
| Msa0182280 | Msa1383350 | 0.815002 | 1.155235e-51 | -8.615850e-47 |
| Msa0183460 | Msa1383350 | 0.806065 | 9.856942e-50 | -8.615850e-47 |
| Msa0183870 | Msa1383350 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa0193600 | Msa1383350 | 0.824665 | 7.138098e-54 | -8.615850e-47 |
| Msa0197530 | Msa1383350 | 0.805412 | 1.351438e-49 | -8.615850e-47 |
| Msa0208810 | Msa1383350 | 0.801865 | 7.360292e-49 | -8.615850e-47 |
| Msa0211650 | Msa1383350 | 0.805359 | 1.386588e-49 | -8.615850e-47 |
| Msa0229360 | Msa1383350 | 0.808578 | 2.891620e-50 | -8.615850e-47 |
| Msa1226610 | Msa1383350 | 0.817528 | 3.147269e-52 | -8.615850e-47 |
| Msa1253810 | Msa1383350 | 0.817207 | 3.716493e-52 | -8.615850e-47 |
| Msa1259400 | Msa1383350 | 0.807124 | 5.890841e-50 | -8.615850e-47 |
| Msa1270620 | Msa1383350 | 0.827020 | 1.970147e-54 | -8.615850e-47 |
| Msa1270690 | Msa1383350 | 0.826981 | 2.012963e-54 | -8.615850e-47 |
| Msa1280620 | Msa1383350 | 0.807376 | 5.210246e-50 | -8.615850e-47 |
| Msa1294840 | Msa1383350 | 0.806055 | 9.904994e-50 | -8.615850e-47 |
| Msa1294960 | Msa1383350 | 0.826843 | 2.171380e-54 | -8.615850e-47 |
| Msa1299700 | Msa1383350 | 0.823662 | 1.227539e-53 | -8.615850e-47 |
| Msa1303580 | Msa1383350 | 0.803695 | 3.083743e-49 | -8.615850e-47 |
| Msa1306990 | Msa1383350 | 0.823438 | 1.385105e-53 | -8.615850e-47 |
| Msa1310690 | Msa1383350 | 0.804637 | 1.963457e-49 | -8.615850e-47 |
| Msa1331350 | Msa1383350 | 0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa1332220 | Msa1383350 | 0.800417 | 1.455296e-48 | -8.615850e-47 |
| Msa1339190 | Msa1383350 | 0.812290 | 4.567201e-51 | -8.615850e-47 |
| Msa1340830 | Msa1383350 | 0.846263 | 2.423938e-59 | -8.615850e-47 |
| Msa0381000 | Msa1383350 | 0.801928 | 7.144298e-49 | -8.615850e-47 |
| Msa0381700 | Msa1383350 | 0.979910 | 5.114509e-149 | -8.615850e-47 |
| Msa0384880 | Msa1383350 | 0.819894 | 9.138798e-53 | -8.615850e-47 |
| Msa0385490 | Msa1383350 | 0.807109 | 5.934403e-50 | -8.615850e-47 |
| Msa0387910 | Msa1383350 | 0.830526 | 2.794373e-55 | -8.615850e-47 |
| Msa0419520 | Msa1383350 | 0.837632 | 4.635204e-57 | -8.615850e-47 |
| Msa0421260 | Msa1383350 | 0.814775 | 1.297170e-51 | -8.615850e-47 |
| Msa0436190 | Msa1383350 | 0.820672 | 6.060187e-53 | -8.615850e-47 |
| Msa0436200 | Msa1383350 | 0.825514 | 4.498229e-54 | -8.615850e-47 |
| Msa0439890 | Msa1383350 | 0.838761 | 2.373827e-57 | -8.615850e-47 |
| Msa0465550 | Msa1383350 | 0.824259 | 8.892189e-54 | -8.615850e-47 |
| Msa0467220 | Msa1383350 | 0.808212 | 3.459795e-50 | -8.615850e-47 |
| Msa0471590 | Msa1383350 | 0.801910 | 7.204137e-49 | -8.615850e-47 |
| Msa0474700 | Msa1383350 | 0.822742 | 2.013497e-53 | -8.615850e-47 |
| Msa0479330 | Msa1383350 | 0.824652 | 7.187035e-54 | -8.615850e-47 |
| Msa0980020 | Msa1383350 | 0.802609 | 5.172481e-49 | -8.615850e-47 |
| Msa0981430 | Msa1383350 | 0.820964 | 5.191457e-53 | -8.615850e-47 |
| Msa1001350 | Msa1383350 | 0.801432 | 9.027594e-49 | -8.615850e-47 |
| Msa1010460 | Msa1383350 | 0.809211 | 2.116464e-50 | -8.615850e-47 |
| Msa1017510 | Msa1383350 | 0.801656 | 8.123733e-49 | -8.615850e-47 |
| Msa1025940 | Msa1383350 | 0.821174 | 4.645872e-53 | -8.615850e-47 |
| Msa1036740 | Msa1383350 | 0.817381 | 3.396036e-52 | -8.615850e-47 |
| Msa1048750 | Msa1383350 | -0.803973 | 2.699376e-49 | -8.615850e-47 |
| Msa1070050 | Msa1383350 | 0.808841 | 2.539847e-50 | -8.615850e-47 |
| Msa1070390 | Msa1383350 | 0.816539 | 5.250246e-52 | -8.615850e-47 |
| Msa1073400 | Msa1383350 | 0.811966 | 5.375095e-51 | -8.615850e-47 |
| Msa1088290 | Msa1383350 | 0.812770 | 3.586073e-51 | -8.615850e-47 |
| Msa1089840 | Msa1383350 | 0.800531 | 1.379681e-48 | -8.615850e-47 |
| Msa1093330 | Msa1383350 | 0.819722 | 1.000296e-52 | -8.615850e-47 |
| Msa1100520 | Msa1383350 | -0.800420 | 1.453320e-48 | -8.615850e-47 |
| Msa0239060 | Msa1383350 | 0.807450 | 5.024426e-50 | -8.615850e-47 |
| Msa0252240 | Msa1383350 | 0.822155 | 2.756130e-53 | -8.615850e-47 |
| Msa0260210 | Msa1383350 | 0.826701 | 2.347648e-54 | -8.615850e-47 |
| Msa0262480 | Msa1383350 | 0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0265160 | Msa1383350 | 0.825903 | 3.636962e-54 | -8.615850e-47 |
| Msa0266210 | Msa1383350 | 0.832498 | 9.133949e-56 | -8.615850e-47 |
| Msa0273650 | Msa1383350 | 0.825039 | 5.825686e-54 | -8.615850e-47 |
| Msa0275360 | Msa1383350 | 0.803418 | 3.519911e-49 | -8.615850e-47 |
| Msa0280430 | Msa1383350 | 0.810273 | 1.251206e-50 | -8.615850e-47 |
| Msa0287670 | Msa1383350 | 0.822252 | 2.616824e-53 | -8.615850e-47 |
| Msa0291520 | Msa1383350 | 0.818529 | 1.869581e-52 | -8.615850e-47 |
| Msa0296920 | Msa1383350 | 0.819252 | 1.280758e-52 | -8.615850e-47 |
| Msa0304290 | Msa1383350 | 0.834529 | 2.843947e-56 | -8.615850e-47 |
| Msa0304330 | Msa1383350 | 0.836475 | 9.158909e-57 | -8.615850e-47 |
| Msa0305890 | Msa1383350 | 0.822293 | 2.559562e-53 | -8.615850e-47 |
| Msa0310410 | Msa1383350 | 0.805056 | 1.604704e-49 | -8.615850e-47 |
| Msa0313930 | Msa1383350 | 0.807937 | 3.960722e-50 | -8.615850e-47 |
| Msa0315850 | Msa1383350 | 0.818849 | 1.581760e-52 | -8.615850e-47 |
| Msa0320610 | Msa1383350 | 0.801433 | 9.026242e-49 | -8.615850e-47 |
| Msa0324240 | Msa1383350 | 0.802588 | 5.225342e-49 | -8.615850e-47 |
| Msa0335320 | Msa1383350 | -0.805323 | 1.410905e-49 | -8.615850e-47 |
| Msa0340810 | Msa1383350 | 0.820681 | 6.031986e-53 | -8.615850e-47 |
| Msa0343190 | Msa1383350 | 0.800419 | 1.454179e-48 | -8.615850e-47 |
| Msa1113880 | Msa1383350 | 0.820748 | 5.822631e-53 | -8.615850e-47 |
| Msa1122820 | Msa1383350 | 0.800363 | 1.492464e-48 | -8.615850e-47 |
| Msa1126850 | Msa1383350 | 0.800029 | 1.745279e-48 | -8.615850e-47 |
| Msa1144970 | Msa1383350 | 0.813784 | 2.147726e-51 | -8.615850e-47 |
| Msa1152520 | Msa1383350 | 0.802682 | 4.996206e-49 | -8.615850e-47 |
| Msa1158230 | Msa1383350 | 0.827786 | 1.290910e-54 | -8.615850e-47 |
| Msa1160360 | Msa1383350 | 0.814265 | 1.682099e-51 | -8.615850e-47 |
| Msa1163870 | Msa1383350 | 0.836949 | 6.930886e-57 | -8.615850e-47 |
| Msa1164020 | Msa1383350 | 0.823592 | 1.275098e-53 | -8.615850e-47 |
| Msa1166870 | Msa1383350 | 0.808559 | 2.918950e-50 | -8.615850e-47 |
| Msa1172130 | Msa1383350 | -0.817011 | 4.113788e-52 | -8.615850e-47 |
| Msa1176360 | Msa1383350 | 0.818997 | 1.463201e-52 | -8.615850e-47 |
| Msa1176980 | Msa1383350 | 0.817035 | 4.063182e-52 | -8.615850e-47 |
| Msa1179950 | Msa1383350 | 0.814425 | 1.550896e-51 | -8.615850e-47 |
| Msa1179980 | Msa1383350 | 0.830813 | 2.377102e-55 | -8.615850e-47 |
| Msa1200320 | Msa1383350 | 0.806229 | 9.104881e-50 | -8.615850e-47 |
| Msa1201830 | Msa1383350 | 0.818358 | 2.043847e-52 | -8.615850e-47 |
| Msa1202150 | Msa1383350 | 0.812199 | 4.781557e-51 | -8.615850e-47 |
| Msa1205480 | Msa1383350 | 0.807416 | 5.108110e-50 | -8.615850e-47 |
| Msa1207730 | Msa1383350 | 0.819505 | 1.121267e-52 | -8.615850e-47 |
| Msa1211000 | Msa1383350 | 0.804240 | 2.375284e-49 | -8.615850e-47 |
| Msa1211830 | Msa1383350 | 0.804141 | 2.491294e-49 | -8.615850e-47 |
| Msa0505380 | Msa1383350 | 0.803552 | 3.301298e-49 | -8.615850e-47 |
| Msa0511490 | Msa1383350 | 0.835316 | 1.801269e-56 | -8.615850e-47 |
| Msa0513440 | Msa1383350 | 0.813817 | 2.112347e-51 | -8.615850e-47 |
| Msa0520140 | Msa1383350 | 0.836281 | 1.026081e-56 | -8.615850e-47 |
| Msa0524590 | Msa1383350 | 0.818302 | 2.104307e-52 | -8.615850e-47 |
| Msa0524600 | Msa1383350 | 0.816321 | 5.874209e-52 | -8.615850e-47 |
| Msa0527910 | Msa1383350 | 0.825816 | 3.813906e-54 | -8.615850e-47 |
| Msa0533960 | Msa1383350 | -0.805318 | 1.414338e-49 | -8.615850e-47 |
| Msa0534410 | Msa1383350 | 0.823472 | 1.359698e-53 | -8.615850e-47 |
| Msa0546570 | Msa1383350 | 0.802753 | 4.831401e-49 | -8.615850e-47 |
| Msa0550540 | Msa1383350 | 0.821826 | 3.284428e-53 | -8.615850e-47 |
| Msa0550570 | Msa1383350 | 0.853842 | 1.829426e-61 | -8.615850e-47 |
| Msa0556790 | Msa1383350 | 0.834521 | 2.856406e-56 | -8.615850e-47 |
| Msa0565620 | Msa1383350 | -0.801536 | 8.596915e-49 | -8.615850e-47 |
| Msa0579370 | Msa1383350 | 0.814293 | 1.658253e-51 | -8.615850e-47 |
| Msa0590650 | Msa1383350 | 0.820484 | 6.696049e-53 | -8.615850e-47 |
| Msa0602370 | Msa1383350 | 0.818818 | 1.606967e-52 | -8.615850e-47 |
| Msa0858440 | Msa1383350 | 0.811717 | 6.087003e-51 | -8.615850e-47 |
| Msa0859180 | Msa1383350 | 0.806087 | 9.754013e-50 | -8.615850e-47 |
| Msa0879860 | Msa1383350 | 0.817323 | 3.499559e-52 | -8.615850e-47 |
| Msa0921870 | Msa1383350 | 0.826280 | 2.958851e-54 | -8.615850e-47 |
| Msa0924150 | Msa1383350 | -0.817728 | 2.837348e-52 | -8.615850e-47 |
| Msa0930140 | Msa1383350 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
| Msa0933290 | Msa1383350 | 0.800899 | 1.160756e-48 | -8.615850e-47 |
| Msa0943270 | Msa1383350 | 0.819946 | 8.892890e-53 | -8.615850e-47 |
| Msa0947800 | Msa1383350 | 0.819464 | 1.145407e-52 | -8.615850e-47 |
| Msa0959840 | Msa1383350 | 0.801509 | 8.706902e-49 | -8.615850e-47 |
| Msa0959910 | Msa1383350 | 0.812118 | 4.979298e-51 | -8.615850e-47 |
| Msa0963020 | Msa1383350 | 0.800207 | 1.606080e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383350 | MtrunA17_Chr3g0135801 | 98.476 | 328 | 1 | 3 | 1 | 326 | 1 | 326 | 0.0 | 652 |
| Msa1383350 | MtrunA17_Chr8g0352031 | 39.667 | 300 | 168 | 6 | 28 | 321 | 63 | 355 | 6.61e-64 | 206 |
| Msa1383350 | MtrunA17_Chr2g0328891 | 40.328 | 305 | 170 | 6 | 22 | 321 | 55 | 352 | 5.99e-63 | 204 |
| Msa1383350 | MtrunA17_Chr4g0040341 | 40.000 | 295 | 165 | 6 | 29 | 318 | 71 | 358 | 4.52e-62 | 201 |
| Msa1383350 | MtrunA17_Chr3g0088301 | 39.731 | 297 | 167 | 6 | 27 | 318 | 87 | 376 | 7.12e-61 | 199 |
| Msa1383350 | MtrunA17_Chr8g0393031 | 36.332 | 289 | 172 | 6 | 38 | 319 | 19 | 302 | 5.95e-58 | 189 |
| Msa1383350 | MtrunA17_Chr3g0135861 | 30.838 | 334 | 189 | 9 | 12 | 321 | 14 | 329 | 3.81e-40 | 144 |
| Msa1383350 | MtrunA17_Chr6g0488081 | 29.355 | 310 | 184 | 9 | 29 | 321 | 15 | 306 | 1.30e-37 | 136 |
| Msa1383350 | MtrunA17_Chr6g0488081 | 24.038 | 208 | 145 | 4 | 32 | 233 | 114 | 314 | 4.55e-14 | 71.6 |
| Msa1383350 | MtrunA17_Chr4g0067231 | 26.994 | 326 | 207 | 6 | 24 | 322 | 5 | 326 | 4.50e-36 | 132 |
| Msa1383350 | MtrunA17_Chr8g0347451 | 30.312 | 320 | 189 | 9 | 26 | 321 | 44 | 353 | 2.08e-35 | 131 |
| Msa1383350 | MtrunA17_Chr5g0396801 | 27.954 | 347 | 208 | 9 | 2 | 321 | 7 | 338 | 1.35e-34 | 129 |
| Msa1383350 | MtrunA17_Chr2g0296061 | 26.710 | 307 | 197 | 5 | 35 | 317 | 17 | 319 | 1.55e-33 | 125 |
| Msa1383350 | MtrunA17_Chr7g0240341 | 29.431 | 299 | 196 | 7 | 32 | 322 | 24 | 315 | 3.33e-33 | 124 |
| Msa1383350 | MtrunA17_Chr4g0006851 | 30.961 | 281 | 169 | 7 | 44 | 321 | 100 | 358 | 2.27e-31 | 121 |
| Msa1383350 | MtrunA17_Chr8g0385571 | 27.273 | 308 | 193 | 8 | 24 | 322 | 218 | 503 | 1.01e-29 | 118 |
| Msa1383350 | MtrunA17_Chr7g0252401 | 28.808 | 302 | 179 | 9 | 31 | 322 | 205 | 480 | 2.52e-29 | 117 |
| Msa1383350 | MtrunA17_Chr7g0242311 | 29.643 | 280 | 172 | 7 | 45 | 321 | 99 | 356 | 2.37e-28 | 113 |
| Msa1383350 | MtrunA17_Chr3g0131501 | 25.723 | 311 | 194 | 8 | 24 | 322 | 196 | 481 | 5.22e-28 | 113 |
| Msa1383350 | MtrunA17_Chr5g0436041 | 30.068 | 296 | 193 | 7 | 32 | 321 | 33 | 320 | 3.09e-27 | 108 |
| Msa1383350 | MtrunA17_Chr7g0269701 | 29.210 | 291 | 194 | 5 | 35 | 321 | 24 | 306 | 2.88e-26 | 106 |
| Msa1383350 | MtrunA17_Chr7g0269701 | 29.000 | 200 | 132 | 5 | 127 | 321 | 12 | 206 | 2.52e-15 | 75.5 |
| Msa1383350 | MtrunA17_Chr1g0149111 | 26.962 | 293 | 193 | 7 | 31 | 321 | 137 | 410 | 2.44e-23 | 99.8 |
| Msa1383350 | MtrunA17_Chr1g0195101 | 27.758 | 281 | 191 | 5 | 45 | 321 | 31 | 303 | 1.97e-22 | 95.5 |
| Msa1383350 | MtrunA17_Chr1g0195101 | 29.648 | 199 | 131 | 6 | 127 | 318 | 4 | 200 | 1.88e-11 | 63.9 |
| Msa1383350 | MtrunA17_Chr3g0137941 | 26.531 | 294 | 193 | 8 | 31 | 321 | 120 | 393 | 1.97e-22 | 96.7 |
| Msa1383350 | MtrunA17_Chr3g0137941 | 26.699 | 206 | 124 | 5 | 33 | 232 | 216 | 400 | 4.74e-16 | 78.2 |
| Msa1383350 | MtrunA17_Chr4g0063561 | 27.157 | 313 | 205 | 10 | 12 | 321 | 102 | 394 | 1.50e-21 | 94.4 |
| Msa1383350 | MtrunA17_Chr4g0063561 | 29.798 | 198 | 115 | 5 | 34 | 227 | 219 | 396 | 1.54e-15 | 76.6 |
| Msa1383350 | MtrunA17_Chr5g0423111 | 27.875 | 287 | 183 | 8 | 45 | 321 | 33 | 305 | 2.61e-20 | 90.1 |
| Msa1383350 | MtrunA17_Chr3g0115801 | 25.723 | 346 | 209 | 8 | 1 | 321 | 80 | 402 | 1.15e-19 | 89.0 |
| Msa1383350 | MtrunA17_Chr8g0366791 | 25.083 | 303 | 206 | 11 | 27 | 319 | 3 | 294 | 3.28e-19 | 86.3 |
| Msa1383350 | MtrunA17_Chr4g0008061 | 25.818 | 275 | 192 | 4 | 49 | 320 | 31 | 296 | 4.49e-19 | 85.9 |
| Msa1383350 | MtrunA17_Chr3g0133111 | 24.281 | 313 | 204 | 8 | 37 | 322 | 5 | 311 | 1.85e-18 | 84.3 |
| Msa1383350 | MtrunA17_Chr5g0411411 | 23.102 | 303 | 214 | 9 | 26 | 319 | 2 | 294 | 2.24e-17 | 81.3 |
| Msa1383350 | MtrunA17_Chr7g0241521 | 23.466 | 277 | 198 | 5 | 49 | 321 | 33 | 299 | 5.05e-17 | 80.1 |
| Msa1383350 | MtrunA17_Chr7g0241521 | 28.641 | 206 | 134 | 6 | 124 | 319 | 3 | 205 | 5.29e-16 | 77.4 |
| Msa1383350 | MtrunA17_Chr6g0463041 | 24.242 | 231 | 128 | 5 | 132 | 321 | 16 | 240 | 7.56e-17 | 79.0 |
| Msa1383350 | MtrunA17_Chr4g0028531 | 24.211 | 285 | 187 | 8 | 36 | 311 | 28 | 292 | 1.66e-15 | 75.9 |
| Msa1383350 | MtrunA17_Chr5g0412401 | 23.922 | 255 | 179 | 7 | 76 | 322 | 73 | 320 | 1.75e-15 | 75.9 |
| Msa1383350 | MtrunA17_Chr4g0046981 | 27.363 | 201 | 130 | 6 | 133 | 322 | 4 | 199 | 1.77e-15 | 75.9 |
| Msa1383350 | MtrunA17_Chr7g0275411 | 23.964 | 338 | 219 | 9 | 16 | 320 | 1 | 333 | 3.06e-15 | 75.5 |
| Msa1383350 | MtrunA17_Chr4g0000261 | 25.723 | 311 | 185 | 12 | 31 | 319 | 64 | 350 | 1.11e-14 | 73.9 |
| Msa1383350 | MtrunA17_Chr3g0086811 | 27.136 | 199 | 124 | 4 | 141 | 319 | 28 | 225 | 1.38e-14 | 73.6 |
| Msa1383350 | MtrunA17_Chr8g0382201 | 25.714 | 315 | 190 | 9 | 28 | 321 | 190 | 481 | 1.84e-14 | 73.9 |
| Msa1383350 | MtrunA17_Chr3g0103681 | 22.648 | 287 | 210 | 4 | 20 | 303 | 2 | 279 | 3.09e-14 | 72.0 |
| Msa1383350 | MtrunA17_Chr8g0372531 | 26.347 | 167 | 121 | 2 | 155 | 319 | 28 | 194 | 1.14e-13 | 70.5 |
| Msa1383350 | MtrunA17_Chr1g0205941 | 21.543 | 311 | 199 | 11 | 35 | 323 | 13 | 300 | 2.88e-13 | 69.3 |
| Msa1383350 | MtrunA17_Chr2g0293621 | 25.083 | 303 | 193 | 12 | 36 | 320 | 32 | 318 | 8.91e-12 | 65.1 |
| Msa1383350 | MtrunA17_Chr1g0201361 | 24.092 | 303 | 178 | 10 | 2 | 296 | 20 | 278 | 1.81e-11 | 63.9 |
| Msa1383350 | MtrunA17_Chr7g0219891 | 27.083 | 192 | 122 | 5 | 141 | 321 | 21 | 205 | 5.59e-11 | 62.8 |
| Msa1383350 | MtrunA17_Chr8g0367641 | 22.267 | 247 | 180 | 5 | 82 | 322 | 73 | 313 | 9.61e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383350 | AT5G56450.1 | 75.915 | 328 | 73 | 3 | 1 | 324 | 3 | 328 | 0.0 | 518 |
| Msa1383350 | AT5G13490.1 | 39.799 | 299 | 167 | 6 | 26 | 318 | 81 | 372 | 2.72e-63 | 206 |
| Msa1383350 | AT5G13490.2 | 39.799 | 299 | 167 | 6 | 26 | 318 | 81 | 372 | 2.72e-63 | 206 |
| Msa1383350 | AT5G17400.1 | 36.964 | 303 | 175 | 8 | 29 | 323 | 10 | 304 | 1.19e-62 | 201 |
| Msa1383350 | AT3G08580.2 | 39.465 | 299 | 168 | 6 | 26 | 318 | 77 | 368 | 2.52e-62 | 203 |
| Msa1383350 | AT3G08580.1 | 39.465 | 299 | 168 | 6 | 26 | 318 | 77 | 368 | 2.52e-62 | 203 |
| Msa1383350 | AT4G28390.1 | 38.983 | 295 | 168 | 6 | 29 | 318 | 79 | 366 | 1.31e-59 | 196 |
| Msa1383350 | AT4G28390.2 | 38.983 | 295 | 168 | 6 | 29 | 318 | 79 | 366 | 1.31e-59 | 196 |
| Msa1383350 | AT4G26180.1 | 31.922 | 307 | 175 | 10 | 29 | 318 | 17 | 306 | 2.83e-37 | 136 |
| Msa1383350 | AT4G01100.1 | 29.859 | 355 | 204 | 9 | 1 | 321 | 1 | 344 | 8.25e-37 | 135 |
| Msa1383350 | AT4G26180.2 | 31.959 | 291 | 165 | 9 | 29 | 303 | 17 | 290 | 3.42e-36 | 132 |
| Msa1383350 | AT4G01100.2 | 28.689 | 366 | 208 | 9 | 1 | 321 | 1 | 358 | 1.14e-34 | 130 |
| Msa1383350 | AT3G53940.1 | 29.970 | 337 | 197 | 13 | 2 | 322 | 48 | 361 | 6.39e-34 | 128 |
| Msa1383350 | AT5G48970.1 | 28.431 | 306 | 188 | 6 | 32 | 310 | 21 | 322 | 8.70e-34 | 127 |
| Msa1383350 | AT3G51870.1 | 32.028 | 281 | 166 | 8 | 44 | 321 | 102 | 360 | 3.95e-33 | 126 |
| Msa1383350 | AT2G37890.1 | 29.936 | 314 | 188 | 14 | 24 | 322 | 37 | 333 | 1.21e-32 | 124 |
| Msa1383350 | AT2G37890.1 | 24.286 | 210 | 145 | 3 | 19 | 227 | 138 | 334 | 6.49e-13 | 68.9 |
| Msa1383350 | AT4G01100.3 | 30.464 | 302 | 174 | 8 | 45 | 321 | 4 | 294 | 6.12e-32 | 121 |
| Msa1383350 | AT1G14560.1 | 30.897 | 301 | 165 | 11 | 45 | 321 | 39 | 320 | 1.50e-31 | 121 |
| Msa1383350 | AT5G01500.1 | 31.206 | 282 | 167 | 8 | 44 | 321 | 130 | 388 | 1.93e-30 | 119 |
| Msa1383350 | AT1G14560.2 | 31.206 | 282 | 152 | 10 | 45 | 303 | 39 | 301 | 6.96e-30 | 116 |
| Msa1383350 | AT3G21390.1 | 25.962 | 312 | 201 | 5 | 32 | 317 | 18 | 325 | 6.96e-29 | 114 |
| Msa1383350 | AT5G61810.2 | 28.912 | 294 | 174 | 9 | 33 | 319 | 65 | 330 | 9.55e-29 | 113 |
| Msa1383350 | AT3G21390.2 | 26.230 | 305 | 195 | 5 | 32 | 310 | 40 | 340 | 1.53e-28 | 113 |
| Msa1383350 | AT5G61810.1 | 28.912 | 294 | 174 | 9 | 33 | 319 | 208 | 473 | 2.59e-28 | 114 |
| Msa1383350 | AT3G55640.1 | 29.022 | 317 | 199 | 11 | 22 | 322 | 20 | 326 | 6.77e-28 | 111 |
| Msa1383350 | AT3G55640.4 | 29.022 | 317 | 199 | 11 | 22 | 322 | 20 | 326 | 6.77e-28 | 111 |
| Msa1383350 | AT5G48970.2 | 28.862 | 246 | 150 | 4 | 86 | 310 | 10 | 251 | 3.63e-27 | 107 |
| Msa1383350 | AT5G07320.1 | 27.972 | 286 | 167 | 10 | 45 | 321 | 221 | 476 | 8.08e-24 | 102 |
| Msa1383350 | AT5G51050.1 | 26.756 | 299 | 185 | 9 | 33 | 322 | 223 | 496 | 2.10e-23 | 100 |
| Msa1383350 | AT4G32400.1 | 26.871 | 294 | 192 | 7 | 31 | 321 | 112 | 385 | 7.07e-23 | 98.2 |
| Msa1383350 | AT4G32400.1 | 29.268 | 205 | 118 | 6 | 32 | 230 | 207 | 390 | 2.41e-16 | 79.7 |
| Msa1383350 | AT3G53940.2 | 31.004 | 229 | 132 | 7 | 2 | 222 | 48 | 258 | 8.31e-23 | 96.7 |
| Msa1383350 | AT3G55640.2 | 30.806 | 211 | 131 | 5 | 22 | 223 | 20 | 224 | 9.39e-21 | 90.1 |
| Msa1383350 | AT3G55640.3 | 30.806 | 211 | 131 | 5 | 22 | 223 | 20 | 224 | 9.39e-21 | 90.1 |
| Msa1383350 | AT1G14560.3 | 30.952 | 210 | 116 | 6 | 135 | 321 | 19 | 222 | 1.50e-20 | 89.0 |
| Msa1383350 | AT1G25380.1 | 27.660 | 282 | 189 | 8 | 45 | 320 | 33 | 305 | 3.09e-20 | 90.5 |
| Msa1383350 | AT1G25380.2 | 27.660 | 282 | 189 | 8 | 45 | 320 | 33 | 305 | 3.09e-20 | 90.5 |
| Msa1383350 | AT2G47490.1 | 27.046 | 281 | 192 | 6 | 45 | 321 | 29 | 300 | 2.18e-19 | 87.4 |
| Msa1383350 | AT3G54110.1 | 26.014 | 296 | 181 | 9 | 41 | 321 | 25 | 297 | 2.55e-19 | 87.0 |
| Msa1383350 | AT3G54110.1 | 25.926 | 189 | 131 | 4 | 140 | 319 | 14 | 202 | 4.66e-13 | 69.3 |
| Msa1383350 | AT3G20240.1 | 24.430 | 307 | 194 | 9 | 31 | 319 | 50 | 336 | 4.93e-19 | 87.0 |
| Msa1383350 | AT5G58970.1 | 24.662 | 296 | 209 | 5 | 28 | 319 | 11 | 296 | 3.61e-18 | 84.0 |
| Msa1383350 | AT1G78180.1 | 26.183 | 317 | 186 | 7 | 28 | 321 | 123 | 414 | 5.19e-17 | 81.6 |
| Msa1383350 | AT5G64970.1 | 27.124 | 306 | 175 | 7 | 28 | 310 | 130 | 410 | 5.84e-17 | 81.6 |
| Msa1383350 | AT5G46800.2 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.28e-16 | 77.4 |
| Msa1383350 | AT5G46800.3 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.28e-16 | 77.4 |
| Msa1383350 | AT5G46800.1 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.28e-16 | 77.4 |
| Msa1383350 | AT5G64970.3 | 26.756 | 299 | 171 | 7 | 28 | 303 | 130 | 403 | 7.33e-16 | 78.2 |
| Msa1383350 | AT5G64970.2 | 26.625 | 323 | 183 | 8 | 20 | 319 | 4 | 295 | 7.65e-16 | 77.4 |
| Msa1383350 | AT2G22500.1 | 26.122 | 245 | 167 | 6 | 83 | 320 | 70 | 307 | 3.18e-14 | 72.8 |
| Msa1383350 | AT5G58970.2 | 27.895 | 190 | 127 | 5 | 140 | 319 | 15 | 204 | 3.81e-14 | 72.0 |
| Msa1383350 | AT2G46320.1 | 21.972 | 355 | 229 | 6 | 10 | 320 | 3 | 353 | 4.32e-14 | 72.8 |
| Msa1383350 | AT2G33820.1 | 26.842 | 190 | 123 | 6 | 140 | 318 | 17 | 201 | 9.13e-14 | 71.2 |
| Msa1383350 | AT2G33820.4 | 26.804 | 194 | 126 | 6 | 136 | 318 | 13 | 201 | 1.04e-13 | 70.5 |
| Msa1383350 | AT1G14140.1 | 24.231 | 260 | 178 | 10 | 44 | 296 | 27 | 274 | 1.09e-13 | 70.9 |
| Msa1383350 | AT5G01340.1 | 24.832 | 298 | 181 | 11 | 39 | 317 | 22 | 295 | 3.40e-13 | 69.7 |
| Msa1383350 | AT5G66380.1 | 27.225 | 191 | 124 | 5 | 140 | 321 | 9 | 193 | 5.46e-13 | 68.9 |
| Msa1383350 | AT5G66380.1 | 22.742 | 299 | 211 | 7 | 35 | 322 | 12 | 301 | 1.36e-11 | 64.7 |
| Msa1383350 | AT4G24570.1 | 24.180 | 244 | 172 | 5 | 82 | 321 | 76 | 310 | 1.05e-12 | 68.2 |
| Msa1383350 | AT1G34065.2 | 28.821 | 229 | 127 | 8 | 7 | 230 | 136 | 333 | 1.44e-12 | 68.2 |
| Msa1383350 | AT1G34065.1 | 28.821 | 229 | 127 | 8 | 7 | 230 | 143 | 340 | 1.57e-12 | 67.8 |
| Msa1383350 | AT4G27940.1 | 23.132 | 281 | 189 | 5 | 61 | 321 | 133 | 406 | 1.69e-12 | 68.2 |
| Msa1383350 | AT2G30160.1 | 24.510 | 306 | 200 | 11 | 28 | 322 | 37 | 322 | 4.90e-12 | 66.2 |
| Msa1383350 | AT1G74240.1 | 23.858 | 197 | 129 | 3 | 140 | 316 | 35 | 230 | 5.99e-12 | 66.2 |
| Msa1383350 | AT5G27520.1 | 22.186 | 311 | 197 | 11 | 35 | 323 | 15 | 302 | 3.01e-11 | 63.9 |
| Msa1383350 | AT2G33820.3 | 25.743 | 202 | 126 | 7 | 136 | 318 | 13 | 209 | 3.72e-11 | 63.5 |
| Msa1383350 | AT3G05290.1 | 22.508 | 311 | 196 | 11 | 35 | 323 | 13 | 300 | 7.16e-11 | 62.8 |
| Msa1383350 | AT1G07030.1 | 21.523 | 302 | 211 | 6 | 28 | 322 | 35 | 317 | 9.38e-11 | 62.4 |
Find 117 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTTACAAAAGCATATTA+AGG | 0.230398 | tig0020594:-56761 | Msa1383350:CDS |
| TATACATTACATTGAGGTTT+AGG | 0.269915 | tig0020594:-56059 | Msa1383350:three_prime_UTR |
| GCAGACACAAGAAAGTAATT+TGG | 0.276307 | tig0020594:-59873 | Msa1383350:CDS |
| TGCACTCAATTTCTCTCTTA+AGG | 0.286938 | tig0020594:-59720 | Msa1383350:intron |
| TTGCTTAATCACACATGATT+AGG | 0.293403 | tig0020594:-60171 | Msa1383350:five_prime_UTR |
| GTATAGTCACCAATTTAAAA+AGG | 0.303725 | tig0020594:-55957 | Msa1383350:three_prime_UTR |
| ATTGTATTATTCGTACTGTT+AGG | 0.303928 | tig0020594:-59808 | Msa1383350:CDS |
| GAGCAGTTTCGAATGTGTTT+AGG | 0.310097 | tig0020594:-56221 | Msa1383350:CDS |
| ATTCACAAACTTTGCTCAAA+AGG | 0.340101 | tig0020594:+60102 | None:intergenic |
| TCTCTTTGTGGCGTGGTAAT+GGG | 0.341488 | tig0020594:-59772 | Msa1383350:CDS |
| ATCTCTTTGTGGCGTGGTAA+TGG | 0.347053 | tig0020594:-59773 | Msa1383350:CDS |
| ACCTCAATGTAATGTATAAC+AGG | 0.350280 | tig0020594:+56064 | None:intergenic |
| AGGTCAAGAAATTTATGAAC+TGG | 0.380390 | tig0020594:-56161 | Msa1383350:CDS |
| TCTTATGGCTGGTGCGGTGA+TGG | 0.394510 | tig0020594:-59948 | Msa1383350:CDS |
| GCTCCAGAGAAAATATTATC+AGG | 0.395058 | tig0020594:+56720 | None:intergenic |
| TGTAATAATAAGATTATGAT+TGG | 0.400234 | tig0020594:-55873 | Msa1383350:three_prime_UTR |
| CTCAGTTAACTACGTTGGTT+TGG | 0.401094 | tig0020594:+56118 | None:intergenic |
| ATTACACCCTCATCAATCAT+TGG | 0.404045 | tig0020594:+55890 | None:intergenic |
| ATTTGAAAATGCATCTTGAA+TGG | 0.404307 | tig0020594:-55998 | Msa1383350:three_prime_UTR |
| ATCAAAACTATCTTTGTCAA+TGG | 0.425899 | tig0020594:-60310 | None:intergenic |
| TCTTTACAAAAGCATATTAA+GGG | 0.444375 | tig0020594:-56760 | Msa1383350:CDS |
| TATTCCAGAAAGACGGGGTA+CGG | 0.444967 | tig0020594:-56548 | Msa1383350:CDS |
| TCGAATGTGTTTAGGAGCAC+TGG | 0.445834 | tig0020594:-56213 | Msa1383350:CDS |
| ATTCGTACTGTTAGGGAAGA+AGG | 0.446792 | tig0020594:-59800 | Msa1383350:CDS |
| CTTATGGCTGGTGCGGTGAT+GGG | 0.449033 | tig0020594:-59947 | Msa1383350:CDS |
| GGAATATAGTGGCTAAGAAA+TGG | 0.449880 | tig0020594:+56565 | None:intergenic |
| TCCAATGTCAGCAGCAAGGC+GGG | 0.451091 | tig0020594:+56620 | None:intergenic |
| ATTCCAGAAAGACGGGGTAC+GGG | 0.453968 | tig0020594:-56547 | Msa1383350:CDS |
| TTAAGCAAGCTTAATTCAAA+AGG | 0.455436 | tig0020594:+60186 | None:intergenic |
| GGCGGGTGTGTGCAATATCA+AGG | 0.457851 | tig0020594:+56637 | None:intergenic |
| TTCACAAACTTTGCTCAAAA+GGG | 0.462339 | tig0020594:+60103 | None:intergenic |
| CGGAGAATGATGATGCAGTC+TGG | 0.466596 | tig0020594:-56327 | Msa1383350:CDS |
| AGTTACAACCTCAGCCGGTC+TGG | 0.467544 | tig0020594:-56376 | Msa1383350:CDS |
| AATAACTTAGCCCTCTCAAT+TGG | 0.476467 | tig0020594:+59899 | None:intergenic |
| TTGTATTATTCGTACTGTTA+GGG | 0.477702 | tig0020594:-59807 | Msa1383350:CDS |
| AAGAAGGTGTTATCTCTTTG+TGG | 0.477794 | tig0020594:-59784 | Msa1383350:CDS |
| AGCAAATATTATCATGGCCG+AGG | 0.479286 | tig0020594:-55927 | Msa1383350:three_prime_UTR |
| ACCCGCCTTGCTGCTGACAT+TGG | 0.479408 | tig0020594:-56621 | Msa1383350:CDS |
| CAGGTTGTAATGAAAGTAAC+CGG | 0.479608 | tig0020594:+56083 | None:intergenic |
| TTTGTTGCTGGAGCTGCAGC+AGG | 0.480970 | tig0020594:-56687 | Msa1383350:CDS |
| ACAATAGCACCCTCGACTGC+TGG | 0.481567 | tig0020594:-56287 | Msa1383350:CDS |
| CCACTATATTCCAGAAAGAC+GGG | 0.483157 | tig0020594:-56554 | Msa1383350:CDS |
| ATCAAATACAATAGTTTACA+AGG | 0.485231 | tig0020594:+55821 | None:intergenic |
| ACCATACCATGTAGTGATGC+AGG | 0.497343 | tig0020594:+56507 | None:intergenic |
| GCAGTCTGGCATGGAACATC+CGG | 0.500996 | tig0020594:-56313 | Msa1383350:CDS |
| TTTCAACGCGATCTTATGGC+TGG | 0.502715 | tig0020594:-59959 | Msa1383350:CDS |
| TAATTAAGCAAATATTATCA+TGG | 0.508571 | tig0020594:-55933 | Msa1383350:three_prime_UTR |
| TATGGTGGTGGCCGCGGACA+AGG | 0.514088 | tig0020594:+60237 | None:intergenic |
| TCCTGCATCACTACATGGTA+TGG | 0.515940 | tig0020594:-56508 | Msa1383350:CDS |
| CGCTTCCACAACGCCAACTC+AGG | 0.520701 | tig0020594:+56417 | None:intergenic |
| GGTCTTCCTGCATCACTACA+TGG | 0.523489 | tig0020594:-56513 | Msa1383350:CDS |
| GCCTTGCTGCTGACATTGGA+AGG | 0.525002 | tig0020594:-56617 | Msa1383350:CDS |
| CACAGAGGTCTTTACTTCGG+AGG | 0.532931 | tig0020594:-56480 | Msa1383350:CDS |
| ACCTGTTATACATTACATTG+AGG | 0.532982 | tig0020594:-56065 | Msa1383350:three_prime_UTR |
| GAGAAATTGAGTGCAACAGA+AGG | 0.533707 | tig0020594:+59728 | None:intergenic |
| GCCACTATATTCCAGAAAGA+CGG | 0.536387 | tig0020594:-56555 | Msa1383350:CDS |
| TTCCAGAAAGACGGGGTACG+GGG | 0.537972 | tig0020594:-56546 | Msa1383350:CDS |
| GCGGGTGTGTGCAATATCAA+GGG | 0.541293 | tig0020594:+56638 | None:intergenic |
| GTGGTAGAAGAAAATTCAAA+GGG | 0.543264 | tig0020594:-59838 | Msa1383350:CDS |
| GGTCAAGAAATTTATGAACT+GGG | 0.543499 | tig0020594:-56160 | Msa1383350:CDS |
| ATTGAAATGCGTGTTCTGTA+TGG | 0.543532 | tig0020594:+60219 | None:intergenic |
| TGAAGAATCTAAACCTGAGT+TGG | 0.544164 | tig0020594:-56430 | Msa1383350:CDS |
| ATGGCTGGTGCGGTGATGGG+TGG | 0.553337 | tig0020594:-59944 | Msa1383350:CDS |
| TGCTGCTGACATTGGAAGGA+CGG | 0.555913 | tig0020594:-56613 | Msa1383350:CDS |
| TGGTGCGGTGATGGGTGGTG+CGG | 0.558043 | tig0020594:-59939 | Msa1383350:CDS |
| AGTGGTAGAAGAAAATTCAA+AGG | 0.562791 | tig0020594:-59839 | Msa1383350:CDS |
| TGAATGGCATTTCAACTCAA+AGG | 0.565329 | tig0020594:-55982 | Msa1383350:three_prime_UTR |
| GTTCTGTATGGTGGTGGCCG+CGG | 0.565504 | tig0020594:+60231 | None:intergenic |
| AAAAGCATATTAAGGGGTGG+AGG | 0.566280 | tig0020594:-56753 | Msa1383350:CDS |
| AGGTTGTACATCACTCATCT+TGG | 0.571908 | tig0020594:-56667 | Msa1383350:CDS |
| ATACGATACCAGACCGGCTG+AGG | 0.572285 | tig0020594:+56368 | None:intergenic |
| CAAGCAGTTACAACCTCAGC+CGG | 0.572927 | tig0020594:-56381 | Msa1383350:CDS |
| AATGATGATGCAGTCTGGCA+TGG | 0.576929 | tig0020594:-56322 | Msa1383350:CDS |
| AGGAAAATCTATCGAACAGA+GGG | 0.577446 | tig0020594:-56264 | Msa1383350:CDS |
| CTAAGAAATGGTGAATGCCT+CGG | 0.578562 | tig0020594:+56577 | None:intergenic |
| ATGAACTCAGTTAACTACGT+TGG | 0.580668 | tig0020594:+56113 | None:intergenic |
| ACAGAGGTCTTTACTTCGGA+GGG | 0.582487 | tig0020594:-56479 | Msa1383350:CDS |
| TGGCTTCTAATCTAGTCCCT+CGG | 0.586919 | tig0020594:+55910 | None:intergenic |
| CCCGTCTTTCTGGAATATAG+TGG | 0.589385 | tig0020594:+56554 | None:intergenic |
| ATGCGTGTTCTGTATGGTGG+TGG | 0.598559 | tig0020594:+60225 | None:intergenic |
| ATACACAGAGGTCTTTACTT+CGG | 0.599114 | tig0020594:-56483 | Msa1383350:CDS |
| AATTTGGCTATTGTTGCTAG+TGG | 0.601620 | tig0020594:-59857 | Msa1383350:CDS |
| TCCTTCCAATGTCAGCAGCA+AGG | 0.602029 | tig0020594:+56616 | None:intergenic |
| TCCAGAAAGACGGGGTACGG+GGG | 0.606693 | tig0020594:-56545 | Msa1383350:CDS |
| CAATTGTGGCACCAATTGAG+AGG | 0.607857 | tig0020594:-59910 | Msa1383350:CDS |
| TACAAAAGCATATTAAGGGG+TGG | 0.608973 | tig0020594:-56756 | Msa1383350:CDS |
| GCGGCGAATTTAAGGATGAG+TGG | 0.609005 | tig0020594:-60058 | Msa1383350:exon |
| GCAAATATTATCATGGCCGA+GGG | 0.611482 | tig0020594:-55926 | Msa1383350:three_prime_UTR |
| AGTTGGCGTTGTGGAAGCGA+TGG | 0.612266 | tig0020594:-56413 | Msa1383350:CDS |
| CTAAACCTGAGTTGGCGTTG+TGG | 0.612706 | tig0020594:-56422 | Msa1383350:CDS |
| GGCGTTGTGGAAGCGATGGA+TGG | 0.614379 | tig0020594:-56409 | Msa1383350:CDS |
| GGTGTTATCTCTTTGTGGCG+TGG | 0.614711 | tig0020594:-59779 | Msa1383350:CDS |
| TTCAATTCCTACCTTGTCCG+CGG | 0.616454 | tig0020594:-60248 | Msa1383350:five_prime_UTR |
| TATCTTAGTCTTGTATGATG+AGG | 0.616581 | tig0020594:-56181 | Msa1383350:CDS |
| TTAGAAGCCAATGATTGATG+AGG | 0.616709 | tig0020594:-55897 | Msa1383350:three_prime_UTR |
| TAGAAGCCAATGATTGATGA+GGG | 0.619868 | tig0020594:-55896 | Msa1383350:three_prime_UTR |
| GTCAAGAAATTTATGAACTG+GGG | 0.624053 | tig0020594:-56159 | Msa1383350:CDS |
| ACGCGATCTTATGGCTGGTG+CGG | 0.629220 | tig0020594:-59954 | Msa1383350:CDS |
| ATAGCACCCTCGACTGCTGG+AGG | 0.632984 | tig0020594:-56284 | Msa1383350:CDS |
| GTGGTGGCCGCGGACAAGGT+AGG | 0.637762 | tig0020594:+60241 | None:intergenic |
| CTTTACAAAAGCATATTAAG+GGG | 0.639364 | tig0020594:-56759 | Msa1383350:CDS |
| ACGGAAGTGCGTCAATTCCG+AGG | 0.643237 | tig0020594:-56594 | Msa1383350:CDS |
| AATTGTGGCACCAATTGAGA+GGG | 0.649550 | tig0020594:-59909 | Msa1383350:CDS |
| CGGGTGTGTGCAATATCAAG+GGG | 0.649657 | tig0020594:+56639 | None:intergenic |
| CTCCGACGAACTGTGTCTAG+CGG | 0.655045 | tig0020594:+56345 | None:intergenic |
| GAATTTAAGGATGAGTGGAG+AGG | 0.658027 | tig0020594:-60053 | Msa1383350:exon |
| TGGTGCGGTTCATACAATTG+TGG | 0.667762 | tig0020594:-59924 | Msa1383350:CDS |
| TCGAGGGTGCTATTGTACAC+CGG | 0.673149 | tig0020594:+56294 | None:intergenic |
| TTCCAATGTCAGCAGCAAGG+CGG | 0.673559 | tig0020594:+56619 | None:intergenic |
| ATCCGCTAGACACAGTTCGT+CGG | 0.677521 | tig0020594:-56347 | Msa1383350:CDS |
| CACTATATTCCAGAAAGACG+GGG | 0.686407 | tig0020594:-56553 | Msa1383350:CDS |
| GAAATGCGTGTTCTGTATGG+TGG | 0.688635 | tig0020594:+60222 | None:intergenic |
| GAGGAAAATCTATCGAACAG+AGG | 0.690051 | tig0020594:-56265 | Msa1383350:CDS |
| TAGCGGATACGATACCAGAC+CGG | 0.706446 | tig0020594:+56362 | None:intergenic |
| ACACATTCGAAACTGCTCCG+CGG | 0.751998 | tig0020594:+56226 | None:intergenic |
| CATGGTATGGTGATACACAG+AGG | 0.757473 | tig0020594:-56495 | Msa1383350:CDS |
| GGGTGTGTGCAATATCAAGG+GGG | 0.800764 | tig0020594:+56640 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATATTATGAAAACATT+TGG | - | tig0020594:56444-56463 | Msa1383350:CDS | 10.0% |
| !!! | TTTTATTTTATTTTACAAGA+TGG | - | tig0020594:57797-57816 | Msa1383350:intron | 10.0% |
| !!! | TTTTAAAAGAAAAGATTTTG+CGG | - | tig0020594:56009-56028 | Msa1383350:three_prime_UTR | 15.0% |
| !! | CTTTAATCTTTATTATGAAA+TGG | - | tig0020594:56397-56416 | Msa1383350:CDS | 15.0% |
| !!! | ATTAATAACTTGCAATATTA+GGG | + | tig0020594:56428-56447 | None:intergenic | 15.0% |
| !!! | TATTAATAACTTGCAATATT+AGG | + | tig0020594:56429-56448 | None:intergenic | 15.0% |
| !!! | AATGCATTTTTAAATGAAAT+AGG | + | tig0020594:58458-58477 | None:intergenic | 15.0% |
| !!! | ATTTGTATTAATTCCAATTT+TGG | - | tig0020594:58556-58575 | Msa1383350:intron | 15.0% |
| !!! | TAAAATTTCAGAATTTTTTC+TGG | - | tig0020594:58840-58859 | Msa1383350:intron | 15.0% |
| !!! | CTTAATTAACCTTTTTAAAT+TGG | + | tig0020594:60141-60160 | None:intergenic | 15.0% |
| !! | TAATTAAGCAAATATTATCA+TGG | - | tig0020594:60153-60172 | Msa1383350:five_prime_UTR | 15.0% |
| !! | TGTAATAATAAGATTATGAT+TGG | - | tig0020594:60213-60232 | Msa1383350:five_prime_UTR | 15.0% |
| !! | AACAATAAACAAACACTAAA+TGG | + | tig0020594:56591-56610 | None:intergenic | 20.0% |
| !! | AAAAAAAACTATTAAGAGCT+CGG | + | tig0020594:57642-57661 | None:intergenic | 20.0% |
| !!! | AAATTTGACTTTTTTCTTCT+CGG | + | tig0020594:57738-57757 | None:intergenic | 20.0% |
| !! | AAGTATAGGAAAAGTAATAA+TGG | - | tig0020594:58054-58073 | Msa1383350:intron | 20.0% |
| !!! | ACTTTTATTGATGATAGAAT+AGG | + | tig0020594:58531-58550 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGTGATAGAAAC+TGG | + | tig0020594:58584-58603 | None:intergenic | 20.0% |
| !! | AGTTTCTATCACAAAATAAA+TGG | - | tig0020594:58583-58602 | Msa1383350:intron | 20.0% |
| !! | ATAAAAATGCTACTAAAATG+TGG | + | tig0020594:59072-59091 | None:intergenic | 20.0% |
| !!! | ATCTTTACAAAAGCATATTA+AGG | - | tig0020594:59325-59344 | Msa1383350:intron | 20.0% |
| !!! | TCTTTACAAAAGCATATTAA+GGG | - | tig0020594:59326-59345 | Msa1383350:intron | 20.0% |
| !!! | CATTTTCAAATGAACTATAA+TGG | + | tig0020594:60079-60098 | None:intergenic | 20.0% |
| !! | ATCAAATACAATAGTTTACA+AGG | + | tig0020594:60268-60287 | None:intergenic | 20.0% |
| ! | TTAAGCAAGCTTAATTCAAA+AGG | + | tig0020594:55903-55922 | None:intergenic | 25.0% |
| !!! | TCAAAGCTTTTTTTTCTTCT+GGG | + | tig0020594:56066-56085 | None:intergenic | 25.0% |
| !!! | TTCAAAGCTTTTTTTTCTTC+TGG | + | tig0020594:56067-56086 | None:intergenic | 25.0% |
| ! | ATTGTATTATTCGTACTGTT+AGG | - | tig0020594:56278-56297 | Msa1383350:CDS | 25.0% |
| ! | TTGTATTATTCGTACTGTTA+GGG | - | tig0020594:56279-56298 | Msa1383350:CDS | 25.0% |
| ! | CATACAAAACCATCATAAAA+GGG | + | tig0020594:56501-56520 | None:intergenic | 25.0% |
| !! | AATATTCTAGAAGAACCTTA+TGG | - | tig0020594:57351-57370 | Msa1383350:intron | 25.0% |
| !! | ATATTCTAGAAGAACCTTAT+GGG | - | tig0020594:57352-57371 | Msa1383350:intron | 25.0% |
| ! | AAAATAATCCGATCAAAACA+CGG | + | tig0020594:57455-57474 | None:intergenic | 25.0% |
| ! | GATAATCAGGAATTATAATG+CGG | + | tig0020594:57569-57588 | None:intergenic | 25.0% |
| ! | ATGAACTCAAAGATGTAATA+AGG | - | tig0020594:58270-58289 | Msa1383350:intron | 25.0% |
| ! | TGAACTCAAAGATGTAATAA+GGG | - | tig0020594:58271-58290 | Msa1383350:intron | 25.0% |
| !! | CTAATGACTTTTCTTAATGA+AGG | + | tig0020594:58345-58364 | None:intergenic | 25.0% |
| ! | CTTCATTAAGAAAAGTCATT+AGG | - | tig0020594:58343-58362 | Msa1383350:intron | 25.0% |
| !!! | AGTCATTAGGCATTTATTTT+AGG | - | tig0020594:58356-58375 | Msa1383350:intron | 25.0% |
| !!! | TTTTAGGATTGACTATTGAT+TGG | - | tig0020594:58372-58391 | Msa1383350:intron | 25.0% |
| !! | TTTAGGATTGACTATTGATT+GGG | - | tig0020594:58373-58392 | Msa1383350:intron | 25.0% |
| !! | TTAGTTTACCATACTGTTTT+TGG | - | tig0020594:58499-58518 | Msa1383350:intron | 25.0% |
| ! | TCAATTTGAGTGTTAAACTA+AGG | + | tig0020594:58636-58655 | None:intergenic | 25.0% |
| ! | TCATTTCATTATAACATGGA+TGG | + | tig0020594:58665-58684 | None:intergenic | 25.0% |
| ! | AGGTTCATTTCATTATAACA+TGG | + | tig0020594:58669-58688 | None:intergenic | 25.0% |
| !!! | CGCTCTTTTAATTTAAAAGA+AGG | + | tig0020594:58689-58708 | None:intergenic | 25.0% |
| !! | ACTTAATCTACACCTTTTAA+TGG | - | tig0020594:58719-58738 | Msa1383350:intron | 25.0% |
| !! | CTTAATCTACACCTTTTAAT+GGG | - | tig0020594:58720-58739 | Msa1383350:intron | 25.0% |
| !! | TTGAAATTTGCTTACGTAAA+AGG | - | tig0020594:58784-58803 | Msa1383350:intron | 25.0% |
| ! | TTACTACAAAAAGCAAGATA+TGG | - | tig0020594:58952-58971 | Msa1383350:intron | 25.0% |
| ! | ATTAGTAATATTGTGACAGA+TGG | - | tig0020594:59004-59023 | Msa1383350:intron | 25.0% |
| !! | CTTTACAAAAGCATATTAAG+GGG | - | tig0020594:59327-59346 | Msa1383350:intron | 25.0% |
| !! | AATCCTGATAATATTTTCTC+TGG | - | tig0020594:59363-59382 | Msa1383350:intron | 25.0% |
| ! | TATACATTACATTGAGGTTT+AGG | - | tig0020594:60027-60046 | Msa1383350:CDS | 25.0% |
| ! | ATTTGAAAATGCATCTTGAA+TGG | - | tig0020594:60088-60107 | Msa1383350:five_prime_UTR | 25.0% |
| ! | GTATAGTCACCAATTTAAAA+AGG | - | tig0020594:60129-60148 | Msa1383350:five_prime_UTR | 25.0% |
| GGAAGAAAAACAAAGTCAAA+TGG | - | tig0020594:55797-55816 | Msa1383350:three_prime_UTR | 30.0% | |
| TTGCTTAATCACACATGATT+AGG | - | tig0020594:55915-55934 | Msa1383350:three_prime_UTR | 30.0% | |
| TTCACAAACTTTGCTCAAAA+GGG | + | tig0020594:55986-56005 | None:intergenic | 30.0% | |
| ATTCACAAACTTTGCTCAAA+AGG | + | tig0020594:55987-56006 | None:intergenic | 30.0% | |
| AGTGGTAGAAGAAAATTCAA+AGG | - | tig0020594:56247-56266 | Msa1383350:CDS | 30.0% | |
| GTGGTAGAAGAAAATTCAAA+GGG | - | tig0020594:56248-56267 | Msa1383350:CDS | 30.0% | |
| GAAAAAACATCATTGAACAC+AGG | + | tig0020594:56472-56491 | None:intergenic | 30.0% | |
| CCATACAAAACCATCATAAA+AGG | + | tig0020594:56502-56521 | None:intergenic | 30.0% | |
| !!! | CCTTTTATGATGGTTTTGTA+TGG | - | tig0020594:56499-56518 | Msa1383350:CDS | 30.0% |
| GTATTTGTAAGAAACTAGCA+TGG | - | tig0020594:56614-56633 | Msa1383350:CDS | 30.0% | |
| AACCAAATGTCTCCAAATAA+TGG | + | tig0020594:56690-56709 | None:intergenic | 30.0% | |
| ! | TTTTGTCATCTCATGAAAAC+TGG | - | tig0020594:56708-56727 | Msa1383350:CDS | 30.0% |
| TTTGTCATCTCATGAAAACT+GGG | - | tig0020594:56709-56728 | Msa1383350:CDS | 30.0% | |
| ATTATCGTAATAGATCCTCA+TGG | - | tig0020594:56889-56908 | Msa1383350:intron | 30.0% | |
| CAATATATAATCGTACCATG+AGG | + | tig0020594:56907-56926 | None:intergenic | 30.0% | |
| ! | TTTACCCATCCATTTTCTTT+AGG | - | tig0020594:56953-56972 | Msa1383350:intron | 30.0% |
| ! | TTACCCATCCATTTTCTTTA+GGG | - | tig0020594:56954-56973 | Msa1383350:intron | 30.0% |
| ! | TATTCTAGAAGAACCTTATG+GGG | - | tig0020594:57353-57372 | Msa1383350:intron | 30.0% |
| AAATAATCCGATCAAAACAC+GGG | + | tig0020594:57454-57473 | None:intergenic | 30.0% | |
| !!! | GTGTTTTGATCGGATTATTT+TGG | - | tig0020594:57454-57473 | Msa1383350:intron | 30.0% |
| ! | CAGCAAGTGAAATTTTGTAT+TGG | + | tig0020594:57509-57528 | None:intergenic | 30.0% |
| ! | TTGCTGTTAAATTCACTCAA+GGG | - | tig0020594:57523-57542 | Msa1383350:intron | 30.0% |
| TAGAGAGAGAAAAGATAATC+AGG | + | tig0020594:57582-57601 | None:intergenic | 30.0% | |
| ! | GTAATTTGCAAGTATTATCC+AGG | - | tig0020594:57765-57784 | Msa1383350:intron | 30.0% |
| AAAATAAAAAAACTGCAGCC+TGG | + | tig0020594:57786-57805 | None:intergenic | 30.0% | |
| CAAGAACATAACCAAAGAAA+AGG | + | tig0020594:57906-57925 | None:intergenic | 30.0% | |
| TTCTTACTCTTCTGTTTACA+GGG | + | tig0020594:58036-58055 | None:intergenic | 30.0% | |
| ! | AACAGAAGAGTAAGAAGTAT+AGG | - | tig0020594:58040-58059 | Msa1383350:intron | 30.0% |
| ATGTACATCAACTTCTTACT+AGG | - | tig0020594:58235-58254 | Msa1383350:intron | 30.0% | |
| TGTACATCAACTTCTTACTA+GGG | - | tig0020594:58236-58255 | Msa1383350:intron | 30.0% | |
| !! | ATAAGGGCATAACTCAATTT+TGG | - | tig0020594:58287-58306 | Msa1383350:intron | 30.0% |
| !! | TAAGGGCATAACTCAATTTT+GGG | - | tig0020594:58288-58307 | Msa1383350:intron | 30.0% |
| !! | AAGCTCTCTAATTTTTGGAA+GGG | - | tig0020594:58403-58422 | Msa1383350:intron | 30.0% |
| ! | TTTTCCTTTTTCTCATTCTC+TGG | - | tig0020594:58476-58495 | Msa1383350:intron | 30.0% |
| ATAGAAACTGGTACCAAAAT+TGG | + | tig0020594:58572-58591 | None:intergenic | 30.0% | |
| ! | TTCCTTTTTCTCCCATTAAA+AGG | + | tig0020594:58734-58753 | None:intergenic | 30.0% |
| !!! | TCAGAATTTTTTCTGGCTAA+CGG | - | tig0020594:58847-58866 | Msa1383350:intron | 30.0% |
| AAAAAGCAAGATATGGATGT+TGG | - | tig0020594:58959-58978 | Msa1383350:intron | 30.0% | |
| GTCACAATATTACTAATGCA+TGG | + | tig0020594:59001-59020 | None:intergenic | 30.0% | |
| ATGGAAAACAAATTTCTGCA+CGG | - | tig0020594:59023-59042 | Msa1383350:intron | 30.0% | |
| ! | ATGCTACTAAAATGTGGTTT+TGG | + | tig0020594:59066-59085 | None:intergenic | 30.0% |
| ! | TTTTTATGTCCAGAAGATGA+TGG | - | tig0020594:59085-59104 | Msa1383350:intron | 30.0% |
| !! | AGATGATGGAATATCAACAT+AGG | - | tig0020594:59099-59118 | Msa1383350:intron | 30.0% |
| ATCAACATAGGCTAAAACTT+TGG | - | tig0020594:59111-59130 | Msa1383350:intron | 30.0% | |
| TCAACATAGGCTAAAACTTT+GGG | - | tig0020594:59112-59131 | Msa1383350:intron | 30.0% | |
| ! | TTCAGACAACATCTCTTTTA+TGG | + | tig0020594:59640-59659 | None:intergenic | 30.0% |
| !! | TATCTTAGTCTTGTATGATG+AGG | - | tig0020594:59905-59924 | Msa1383350:CDS | 30.0% |
| AGGTCAAGAAATTTATGAAC+TGG | - | tig0020594:59925-59944 | Msa1383350:CDS | 30.0% | |
| GGTCAAGAAATTTATGAACT+GGG | - | tig0020594:59926-59945 | Msa1383350:CDS | 30.0% | |
| GTCAAGAAATTTATGAACTG+GGG | - | tig0020594:59927-59946 | Msa1383350:CDS | 30.0% | |
| !! | AACTGAGTTCATTTTGATAC+CGG | - | tig0020594:59984-60003 | Msa1383350:CDS | 30.0% |
| ACCTGTTATACATTACATTG+AGG | - | tig0020594:60021-60040 | Msa1383350:CDS | 30.0% | |
| ACCTCAATGTAATGTATAAC+AGG | + | tig0020594:60025-60044 | None:intergenic | 30.0% | |
| ATTGAAATGCGTGTTCTGTA+TGG | + | tig0020594:55870-55889 | None:intergenic | 35.0% | |
| ! | AAGATTTTGCGGCGAATTTA+AGG | - | tig0020594:56020-56039 | Msa1383350:three_prime_UTR | 35.0% |
| ! | CAATTTTCAACGCGATCTTA+TGG | - | tig0020594:56123-56142 | Msa1383350:three_prime_UTR | 35.0% |
| AATAACTTAGCCCTCTCAAT+TGG | + | tig0020594:56190-56209 | None:intergenic | 35.0% | |
| GCAGACACAAGAAAGTAATT+TGG | - | tig0020594:56213-56232 | Msa1383350:CDS | 35.0% | |
| AATTTGGCTATTGTTGCTAG+TGG | - | tig0020594:56229-56248 | Msa1383350:CDS | 35.0% | |
| !! | AAGAAGGTGTTATCTCTTTG+TGG | - | tig0020594:56302-56321 | Msa1383350:CDS | 35.0% |
| TGCACTCAATTTCTCTCTTA+AGG | - | tig0020594:56366-56385 | Msa1383350:CDS | 35.0% | |
| CAAAACCATCATAAAAGGGT+GGG | + | tig0020594:56497-56516 | None:intergenic | 35.0% | |
| ACAAAACCATCATAAAAGGG+TGG | + | tig0020594:56498-56517 | None:intergenic | 35.0% | |
| !! | ATTGCTGATCCATTTTTGAC+TGG | - | tig0020594:56542-56561 | Msa1383350:CDS | 35.0% |
| GATATCAAGCCAGTCAAAAA+TGG | + | tig0020594:56554-56573 | None:intergenic | 35.0% | |
| CTGTAACAAGCACCATTATT+TGG | - | tig0020594:56675-56694 | Msa1383350:CDS | 35.0% | |
| CACCATTATTTGGAGACATT+TGG | - | tig0020594:56685-56704 | Msa1383350:CDS | 35.0% | |
| TATATTGTTTGCATACGCCA+CGG | - | tig0020594:56920-56939 | Msa1383350:intron | 35.0% | |
| AAGAAAATGGATGGGTAAAC+TGG | + | tig0020594:56952-56971 | None:intergenic | 35.0% | |
| GAACCCTAAAGAAAATGGAT+GGG | + | tig0020594:56960-56979 | None:intergenic | 35.0% | |
| AAGAGGAACCCTAAAGAAAA+TGG | + | tig0020594:56965-56984 | None:intergenic | 35.0% | |
| AAGGGCTTGATATATAAGGA+GGG | + | tig0020594:57124-57143 | None:intergenic | 35.0% | |
| TAAGGGCTTGATATATAAGG+AGG | + | tig0020594:57125-57144 | None:intergenic | 35.0% | |
| TCCTTATATATCAAGCCCTT+AGG | - | tig0020594:57124-57143 | Msa1383350:intron | 35.0% | |
| CCTTATATATCAAGCCCTTA+GGG | - | tig0020594:57125-57144 | Msa1383350:intron | 35.0% | |
| CTTGTTCTTCATTACTCTTC+TGG | - | tig0020594:57180-57199 | Msa1383350:intron | 35.0% | |
| TATCTTCTTGCCTTTATGTG+TGG | - | tig0020594:57243-57262 | Msa1383350:intron | 35.0% | |
| CTGAATCCAGAGGATTATAA+TGG | - | tig0020594:57312-57331 | Msa1383350:intron | 35.0% | |
| AATCCAGAGGATTATAATGG+AGG | - | tig0020594:57315-57334 | Msa1383350:intron | 35.0% | |
| ! | ATCCAGAGGATTATAATGGA+GGG | - | tig0020594:57316-57335 | Msa1383350:intron | 35.0% |
| !! | CTTGCTGTTAAATTCACTCA+AGG | - | tig0020594:57522-57541 | Msa1383350:intron | 35.0% |
| AAACTATTAAGAGCTCGGAA+TGG | + | tig0020594:57637-57656 | None:intergenic | 35.0% | |
| GTACCAGGTAGAAGTAATAA+GGG | + | tig0020594:57709-57728 | None:intergenic | 35.0% | |
| !!! | ACTTTTTTCTTCTCGGACAT+AGG | + | tig0020594:57731-57750 | None:intergenic | 35.0% |
| AAAGGTCAGATTTCGGTATA+GGG | + | tig0020594:58012-58031 | None:intergenic | 35.0% | |
| CTTCTTACTCTTCTGTTTAC+AGG | + | tig0020594:58037-58056 | None:intergenic | 35.0% | |
| TTTGTGCAAATAATCCCACT+TGG | - | tig0020594:58084-58103 | Msa1383350:intron | 35.0% | |
| ! | TCCTTTTAGCCTGAAACAAA+CGG | - | tig0020594:58160-58179 | Msa1383350:intron | 35.0% |
| !! | GAAGTTGATGTACATTTGAG+AGG | + | tig0020594:58230-58249 | None:intergenic | 35.0% |
| ! | AGACCAAGCTCTCTAATTTT+TGG | - | tig0020594:58398-58417 | Msa1383350:intron | 35.0% |
| CTTCCAAAAATTAGAGAGCT+TGG | + | tig0020594:58404-58423 | None:intergenic | 35.0% | |
| !! | CAAGCTCTCTAATTTTTGGA+AGG | - | tig0020594:58402-58421 | Msa1383350:intron | 35.0% |
| ACCCAAGACTCTAATTTCTT+GGG | - | tig0020594:58430-58449 | Msa1383350:intron | 35.0% | |
| TCCCAAGAAATTAGAGTCTT+GGG | + | tig0020594:58434-58453 | None:intergenic | 35.0% | |
| TTCCCAAGAAATTAGAGTCT+TGG | + | tig0020594:58435-58454 | None:intergenic | 35.0% | |
| CTAACCAGAGAATGAGAAAA+AGG | + | tig0020594:58483-58502 | None:intergenic | 35.0% | |
| GGATTACACCAAAAACAGTA+TGG | + | tig0020594:58510-58529 | None:intergenic | 35.0% | |
| ! | CACCTTTTAATGGGAGAAAA+AGG | - | tig0020594:58729-58748 | Msa1383350:intron | 35.0% |
| TTGCTTACGTAAAAGGAAAC+AGG | - | tig0020594:58791-58810 | Msa1383350:intron | 35.0% | |
| TGCTTACGTAAAAGGAAACA+GGG | - | tig0020594:58792-58811 | Msa1383350:intron | 35.0% | |
| ATGTTGGCATCATTCTCATA+AGG | - | tig0020594:58975-58994 | Msa1383350:intron | 35.0% | |
| GTTGATATTCCATCATCTTC+TGG | + | tig0020594:59097-59116 | None:intergenic | 35.0% | |
| GCAGAACAACATCATGAAAT+AGG | + | tig0020594:59196-59215 | None:intergenic | 35.0% | |
| !!! | CTATCTCGTGTTTTTTCAAC+AGG | - | tig0020594:59302-59321 | Msa1383350:intron | 35.0% |
| ! | TACAAAAGCATATTAAGGGG+TGG | - | tig0020594:59330-59349 | Msa1383350:intron | 35.0% |
| GCTCCAGAGAAAATATTATC+AGG | + | tig0020594:59369-59388 | None:intergenic | 35.0% | |
| GGAATATAGTGGCTAAGAAA+TGG | + | tig0020594:59524-59543 | None:intergenic | 35.0% | |
| ATACACAGAGGTCTTTACTT+CGG | - | tig0020594:59603-59622 | Msa1383350:intron | 35.0% | |
| TGAAGAATCTAAACCTGAGT+TGG | - | tig0020594:59656-59675 | Msa1383350:intron | 35.0% | |
| AGGAAAATCTATCGAACAGA+GGG | - | tig0020594:59822-59841 | Msa1383350:CDS | 35.0% | |
| ATGAACTCAGTTAACTACGT+TGG | + | tig0020594:59976-59995 | None:intergenic | 35.0% | |
| CAGGTTGTAATGAAAGTAAC+CGG | + | tig0020594:60006-60025 | None:intergenic | 35.0% | |
| TGAATGGCATTTCAACTCAA+AGG | - | tig0020594:60104-60123 | Msa1383350:five_prime_UTR | 35.0% | |
| TTAGAAGCCAATGATTGATG+AGG | - | tig0020594:60189-60208 | Msa1383350:five_prime_UTR | 35.0% | |
| TAGAAGCCAATGATTGATGA+GGG | - | tig0020594:60190-60209 | Msa1383350:five_prime_UTR | 35.0% | |
| ATTACACCCTCATCAATCAT+TGG | + | tig0020594:60199-60218 | None:intergenic | 35.0% | |
| GAATTTAAGGATGAGTGGAG+AGG | - | tig0020594:56033-56052 | Msa1383350:three_prime_UTR | 40.0% | |
| AATTGTGGCACCAATTGAGA+GGG | - | tig0020594:56177-56196 | Msa1383350:CDS | 40.0% | |
| ATTCGTACTGTTAGGGAAGA+AGG | - | tig0020594:56286-56305 | Msa1383350:CDS | 40.0% | |
| GAGAAATTGAGTGCAACAGA+AGG | + | tig0020594:56361-56380 | None:intergenic | 40.0% | |
| ! | TTCTTCCCACCCTTTTATGA+TGG | - | tig0020594:56489-56508 | Msa1383350:CDS | 40.0% |
| ATGCAGGCAATGTTGAAAAC+TGG | - | tig0020594:56732-56751 | Msa1383350:CDS | 40.0% | |
| ACTCAGAAAGAACCCTTCAA+CGG | - | tig0020594:56850-56869 | Msa1383350:intron | 40.0% | |
| GGAACCCTAAAGAAAATGGA+TGG | + | tig0020594:56961-56980 | None:intergenic | 40.0% | |
| ATAGGAAAATGCACCGTAGA+AGG | - | tig0020594:56990-57009 | Msa1383350:intron | 40.0% | |
| !! | CCTACTGTTTCTACCTTCTA+CGG | + | tig0020594:57006-57025 | None:intergenic | 40.0% |
| TAGAAGGTAGAAACAGTAGG+TGG | - | tig0020594:57006-57025 | Msa1383350:intron | 40.0% | |
| AGAAACAGTAGGTGGATACT+TGG | - | tig0020594:57014-57033 | Msa1383350:intron | 40.0% | |
| CCCTAAGGGCTTGATATATA+AGG | + | tig0020594:57128-57147 | None:intergenic | 40.0% | |
| ! | ACAACCCTTTTAGATTCTGG+GGG | + | tig0020594:57212-57231 | None:intergenic | 40.0% |
| ! | CACAACCCTTTTAGATTCTG+GGG | + | tig0020594:57213-57232 | None:intergenic | 40.0% |
| ! | CCACAACCCTTTTAGATTCT+GGG | + | tig0020594:57214-57233 | None:intergenic | 40.0% |
| ! | TCCACAACCCTTTTAGATTC+TGG | + | tig0020594:57215-57234 | None:intergenic | 40.0% |
| GAATCTAAAAGGGTTGTGGA+TGG | - | tig0020594:57215-57234 | Msa1383350:intron | 40.0% | |
| !! | TACTCTGAAACTGAATCCAG+AGG | - | tig0020594:57302-57321 | Msa1383350:intron | 40.0% |
| ATCCCTCCATTATAATCCTC+TGG | + | tig0020594:57321-57340 | None:intergenic | 40.0% | |
| ACTGAGGATGAATCGCTAAT+AGG | + | tig0020594:57379-57398 | None:intergenic | 40.0% | |
| CTTCATGGCATCACAAGTAT+GGG | + | tig0020594:57411-57430 | None:intergenic | 40.0% | |
| ACTTCATGGCATCACAAGTA+TGG | + | tig0020594:57412-57431 | None:intergenic | 40.0% | |
| TGCGGTGAAGGACAAATAAA+AGG | + | tig0020594:57551-57570 | None:intergenic | 40.0% | |
| CAGGAATTATAATGCGGTGA+AGG | + | tig0020594:57563-57582 | None:intergenic | 40.0% | |
| ATAAGGGATGGAACACTACT+AGG | + | tig0020594:57693-57712 | None:intergenic | 40.0% | |
| CAGGTAGAAGTAATAAGGGA+TGG | + | tig0020594:57705-57724 | None:intergenic | 40.0% | |
| CATCCCTTATTACTTCTACC+TGG | - | tig0020594:57703-57722 | Msa1383350:intron | 40.0% | |
| GGTACCAGGTAGAAGTAATA+AGG | + | tig0020594:57710-57729 | None:intergenic | 40.0% | |
| CTTTAGCCCTTTCACTGATA+GGG | - | tig0020594:57874-57893 | Msa1383350:intron | 40.0% | |
| TTTAGCCCTTTCACTGATAG+GGG | - | tig0020594:57875-57894 | Msa1383350:intron | 40.0% | |
| AGCATTGCAATTCTAACAGC+AGG | + | tig0020594:57955-57974 | None:intergenic | 40.0% | |
| CAAAGGTCAGATTTCGGTAT+AGG | + | tig0020594:58013-58032 | None:intergenic | 40.0% | |
| AAAGGACTTTGCATCATGGA+AGG | + | tig0020594:58146-58165 | None:intergenic | 40.0% | |
| GCTAAAAGGACTTTGCATCA+TGG | + | tig0020594:58150-58169 | None:intergenic | 40.0% | |
| ! | CCTTTTAGCCTGAAACAAAC+GGG | - | tig0020594:58161-58180 | Msa1383350:intron | 40.0% |
| GACCCAAGACTCTAATTTCT+TGG | - | tig0020594:58429-58448 | Msa1383350:intron | 40.0% | |
| AAAAAGGAACTGATGCATCG+TGG | - | tig0020594:58745-58764 | Msa1383350:intron | 40.0% | |
| AAAAGGAACTGATGCATCGT+GGG | - | tig0020594:58746-58765 | Msa1383350:intron | 40.0% | |
| ! | GCATTGACATAGATCAGTTG+CGG | + | tig0020594:59174-59193 | None:intergenic | 40.0% |
| ! | AAAAGCATATTAAGGGGTGG+AGG | - | tig0020594:59333-59352 | Msa1383350:intron | 40.0% |
| ! | GCATCAGCTAATTTTGTTGC+TGG | - | tig0020594:59387-59406 | Msa1383350:intron | 40.0% |
| AGGTTGTACATCACTCATCT+TGG | - | tig0020594:59419-59438 | Msa1383350:intron | 40.0% | |
| CTAAGAAATGGTGAATGCCT+CGG | + | tig0020594:59512-59531 | None:intergenic | 40.0% | |
| GCCACTATATTCCAGAAAGA+CGG | - | tig0020594:59531-59550 | Msa1383350:intron | 40.0% | |
| CCACTATATTCCAGAAAGAC+GGG | - | tig0020594:59532-59551 | Msa1383350:intron | 40.0% | |
| CACTATATTCCAGAAAGACG+GGG | - | tig0020594:59533-59552 | Msa1383350:intron | 40.0% | |
| GAGGAAAATCTATCGAACAG+AGG | - | tig0020594:59821-59840 | Msa1383350:CDS | 40.0% | |
| !! | GGATTGATTTCGTTTTACCG+CGG | - | tig0020594:59843-59862 | Msa1383350:CDS | 40.0% |
| GAGCAGTTTCGAATGTGTTT+AGG | - | tig0020594:59865-59884 | Msa1383350:CDS | 40.0% | |
| ! | CTCAGTTAACTACGTTGGTT+TGG | + | tig0020594:59971-59990 | None:intergenic | 40.0% |
| AGCAAATATTATCATGGCCG+AGG | - | tig0020594:60159-60178 | Msa1383350:five_prime_UTR | 40.0% | |
| GCAAATATTATCATGGCCGA+GGG | - | tig0020594:60160-60179 | Msa1383350:five_prime_UTR | 40.0% | |
| TTCAATTCCTACCTTGTCCG+CGG | - | tig0020594:55838-55857 | Msa1383350:three_prime_UTR | 45.0% | |
| GAAATGCGTGTTCTGTATGG+TGG | + | tig0020594:55867-55886 | None:intergenic | 45.0% | |
| TTTCAACGCGATCTTATGGC+TGG | - | tig0020594:56127-56146 | Msa1383350:three_prime_UTR | 45.0% | |
| TGGTGCGGTTCATACAATTG+TGG | - | tig0020594:56162-56181 | Msa1383350:CDS | 45.0% | |
| CAATTGTGGCACCAATTGAG+AGG | - | tig0020594:56176-56195 | Msa1383350:CDS | 45.0% | |
| ATCTCTTTGTGGCGTGGTAA+TGG | - | tig0020594:56313-56332 | Msa1383350:CDS | 45.0% | |
| TCTCTTTGTGGCGTGGTAAT+GGG | - | tig0020594:56314-56333 | Msa1383350:CDS | 45.0% | |
| AACTAGCATGGCTTGAGAAG+AGG | - | tig0020594:56626-56645 | Msa1383350:CDS | 45.0% | |
| ACTAGCATGGCTTGAGAAGA+GGG | - | tig0020594:56627-56646 | Msa1383350:CDS | 45.0% | |
| TCTCATGAAAACTGGGATGC+AGG | - | tig0020594:56716-56735 | Msa1383350:CDS | 45.0% | |
| GGTTGTGTATGCTGTCAACT+AGG | - | tig0020594:56753-56772 | Msa1383350:CDS | 45.0% | |
| AAAGAACCCTTCAACGGATG+TGG | - | tig0020594:56856-56875 | Msa1383350:intron | 45.0% | |
| CATCTTCCACATCCGTTGAA+GGG | + | tig0020594:56865-56884 | None:intergenic | 45.0% | |
| ACATCTTCCACATCCGTTGA+AGG | + | tig0020594:56866-56885 | None:intergenic | 45.0% | |
| ! | TACGGTGCATTTTCCTATCG+CGG | + | tig0020594:56988-57007 | None:intergenic | 45.0% |
| CCGTAGAAGGTAGAAACAGT+AGG | - | tig0020594:57003-57022 | Msa1383350:intron | 45.0% | |
| CAGTAGGTGGATACTTGGAA+AGG | - | tig0020594:57019-57038 | Msa1383350:intron | 45.0% | |
| TCCGACGCTCAAGTCAATTA+GGG | - | tig0020594:57045-57064 | Msa1383350:intron | 45.0% | |
| !! | ACCCTAATTGACTTGAGCGT+CGG | + | tig0020594:57049-57068 | None:intergenic | 45.0% |
| GCCTATGCAATACTCCCTAA+GGG | + | tig0020594:57142-57161 | None:intergenic | 45.0% | |
| AGCCTATGCAATACTCCCTA+AGG | + | tig0020594:57143-57162 | None:intergenic | 45.0% | |
| TGCATCCCCCAGAATCTAAA+AGG | - | tig0020594:57204-57223 | Msa1383350:intron | 45.0% | |
| GCATCCCCCAGAATCTAAAA+GGG | - | tig0020594:57205-57224 | Msa1383350:intron | 45.0% | |
| CCCAGAATCTAAAAGGGTTG+TGG | - | tig0020594:57211-57230 | Msa1383350:intron | 45.0% | |
| TCTAAAAGGGTTGTGGATGG+TGG | - | tig0020594:57218-57237 | Msa1383350:intron | 45.0% | |
| CGGTGATTGTCACACAATCA+CGG | + | tig0020594:57275-57294 | None:intergenic | 45.0% | |
| CGTGATTGTGTGACAATCAC+CGG | - | tig0020594:57273-57292 | Msa1383350:intron | 45.0% | |
| GTGATTGTGTGACAATCACC+GGG | - | tig0020594:57274-57293 | Msa1383350:intron | 45.0% | |
| TGATTGTGTGACAATCACCG+GGG | - | tig0020594:57275-57294 | Msa1383350:intron | 45.0% | |
| ! | CAGTTTCAGAGTATCTTCCC+CGG | + | tig0020594:57295-57314 | None:intergenic | 45.0% |
| AATCGCTAATAGGCCCCATA+AGG | + | tig0020594:57369-57388 | None:intergenic | 45.0% | |
| TGGCATCACAAGTATGGGAT+GGG | + | tig0020594:57406-57425 | None:intergenic | 45.0% | |
| ATGGCATCACAAGTATGGGA+TGG | + | tig0020594:57407-57426 | None:intergenic | 45.0% | |
| ACTTGTGATGCCATGAAGTG+AGG | - | tig0020594:57413-57432 | Msa1383350:intron | 45.0% | |
| CTTGTGATGCCATGAAGTGA+GGG | - | tig0020594:57414-57433 | Msa1383350:intron | 45.0% | |
| ! | GCTTTAGTTCCCTCACTTCA+TGG | + | tig0020594:57426-57445 | None:intergenic | 45.0% |
| CCTATCAGTGAAAGGGCTAA+AGG | + | tig0020594:57876-57895 | None:intergenic | 45.0% | |
| CCTTTAGCCCTTTCACTGAT+AGG | - | tig0020594:57873-57892 | Msa1383350:intron | 45.0% | |
| TTAGCCCTTTCACTGATAGG+GGG | - | tig0020594:57876-57895 | Msa1383350:intron | 45.0% | |
| AAGTCCCCCTATCAGTGAAA+GGG | + | tig0020594:57883-57902 | None:intergenic | 45.0% | |
| ! | TAGGGGGACTTCCTTTTCTT+TGG | - | tig0020594:57892-57911 | Msa1383350:intron | 45.0% |
| TTTCGGTATAGGGATGGAGA+AGG | + | tig0020594:58002-58021 | None:intergenic | 45.0% | |
| GTCAGATTTCGGTATAGGGA+TGG | + | tig0020594:58008-58027 | None:intergenic | 45.0% | |
| ACAGGGCAAAGGTCAGATTT+CGG | + | tig0020594:58019-58038 | None:intergenic | 45.0% | |
| CTCTTCTGTTTACAGGGCAA+AGG | + | tig0020594:58030-58049 | None:intergenic | 45.0% | |
| TCCCACTTGGAGTGATTTCA+AGG | - | tig0020594:58097-58116 | Msa1383350:intron | 45.0% | |
| GCCTTGAAATCACTCCAAGT+GGG | + | tig0020594:58101-58120 | None:intergenic | 45.0% | |
| AGCCTTGAAATCACTCCAAG+TGG | + | tig0020594:58102-58121 | None:intergenic | 45.0% | |
| CCCGTTTGTTTCAGGCTAAA+AGG | + | tig0020594:58164-58183 | None:intergenic | 45.0% | |
| GGGCAATTTGAATTGTGTGC+TGG | - | tig0020594:58203-58222 | Msa1383350:intron | 45.0% | |
| !! | AAACAGGGCACTTTTCAGTC+AGG | - | tig0020594:58807-58826 | Msa1383350:intron | 45.0% |
| GCACGGAAGTTTGTGAAATG+TGG | - | tig0020594:59040-59059 | Msa1383350:intron | 45.0% | |
| !! | CCCGTCTTTCTGGAATATAG+TGG | + | tig0020594:59535-59554 | None:intergenic | 45.0% |
| TATTCCAGAAAGACGGGGTA+CGG | - | tig0020594:59538-59557 | Msa1383350:intron | 45.0% | |
| TCCTGCATCACTACATGGTA+TGG | - | tig0020594:59578-59597 | Msa1383350:intron | 45.0% | |
| ACCATACCATGTAGTGATGC+AGG | + | tig0020594:59582-59601 | None:intergenic | 45.0% | |
| CATGGTATGGTGATACACAG+AGG | - | tig0020594:59591-59610 | Msa1383350:intron | 45.0% | |
| ACAGAGGTCTTTACTTCGGA+GGG | - | tig0020594:59607-59626 | Msa1383350:intron | 45.0% | |
| ! | AATGATGATGCAGTCTGGCA+TGG | - | tig0020594:59764-59783 | Msa1383350:CDS | 45.0% |
| ! | TCGAATGTGTTTAGGAGCAC+TGG | - | tig0020594:59873-59892 | Msa1383350:CDS | 45.0% |
| TGGCTTCTAATCTAGTCCCT+CGG | + | tig0020594:60179-60198 | None:intergenic | 45.0% | |
| ATGCGTGTTCTGTATGGTGG+TGG | + | tig0020594:55864-55883 | None:intergenic | 50.0% | |
| GCGGCGAATTTAAGGATGAG+TGG | - | tig0020594:56028-56047 | Msa1383350:three_prime_UTR | 50.0% | |
| ! | GGTGTTATCTCTTTGTGGCG+TGG | - | tig0020594:56307-56326 | Msa1383350:CDS | 50.0% |
| AGAAGAGGGATGACGAGAGT+TGG | - | tig0020594:56641-56660 | Msa1383350:CDS | 50.0% | |
| ! | GCATTTTCCTATCGCGGAAG+AGG | + | tig0020594:56982-57001 | None:intergenic | 50.0% |
| CTCCGACGCTCAAGTCAATT+AGG | - | tig0020594:57044-57063 | Msa1383350:intron | 50.0% | |
| !! | GCCCTTAGGGAGTATTGCAT+AGG | - | tig0020594:57138-57157 | Msa1383350:intron | 50.0% |
| TTGTCACACAATCACGGCCA+CGG | + | tig0020594:57269-57288 | None:intergenic | 50.0% | |
| TCCGATCAAAACACGGGTCA+GGG | + | tig0020594:57448-57467 | None:intergenic | 50.0% | |
| ATCCGATCAAAACACGGGTC+AGG | + | tig0020594:57449-57468 | None:intergenic | 50.0% | |
| GCTCGGAATGGTGAACTTGA+TGG | + | tig0020594:57625-57644 | None:intergenic | 50.0% | |
| GGATGGAACACTACTAGGCA+AGG | + | tig0020594:57688-57707 | None:intergenic | 50.0% | |
| TCTTCTCGGACATAGGTACC+AGG | + | tig0020594:57724-57743 | None:intergenic | 50.0% | |
| ! | AGGGCTAAAGGTGTACATGC+TGG | + | tig0020594:57864-57883 | None:intergenic | 50.0% |
| GAAGTCCCCCTATCAGTGAA+AGG | + | tig0020594:57884-57903 | None:intergenic | 50.0% | |
| TTAGCCTGAAACAAACGGGC+AGG | - | tig0020594:58165-58184 | Msa1383350:intron | 50.0% | |
| TAGCCTGAAACAAACGGGCA+GGG | - | tig0020594:58166-58185 | Msa1383350:intron | 50.0% | |
| ACCAGTCGTCGCAACTATCA+TGG | - | tig0020594:58312-58331 | Msa1383350:intron | 50.0% | |
| TCCATGATAGTTGCGACGAC+TGG | + | tig0020594:58316-58335 | None:intergenic | 50.0% | |
| !! | AGGGCACTTTTCAGTCAGGT+GGG | - | tig0020594:58811-58830 | Msa1383350:intron | 50.0% |
| GGGTGTGTGCAATATCAAGG+GGG | + | tig0020594:59449-59468 | None:intergenic | 50.0% | |
| CGGGTGTGTGCAATATCAAG+GGG | + | tig0020594:59450-59469 | None:intergenic | 50.0% | |
| GCGGGTGTGTGCAATATCAA+GGG | + | tig0020594:59451-59470 | None:intergenic | 50.0% | |
| TTCCAATGTCAGCAGCAAGG+CGG | + | tig0020594:59470-59489 | None:intergenic | 50.0% | |
| TCCTTCCAATGTCAGCAGCA+AGG | + | tig0020594:59473-59492 | None:intergenic | 50.0% | |
| TGCTGCTGACATTGGAAGGA+CGG | - | tig0020594:59473-59492 | Msa1383350:intron | 50.0% | |
| ATTCCAGAAAGACGGGGTAC+GGG | - | tig0020594:59539-59558 | Msa1383350:intron | 50.0% | |
| GGTCTTCCTGCATCACTACA+TGG | - | tig0020594:59573-59592 | Msa1383350:intron | 50.0% | |
| CACAGAGGTCTTTACTTCGG+AGG | - | tig0020594:59606-59625 | Msa1383350:intron | 50.0% | |
| ! | CTAAACCTGAGTTGGCGTTG+TGG | - | tig0020594:59664-59683 | Msa1383350:intron | 50.0% |
| CAAGCAGTTACAACCTCAGC+CGG | - | tig0020594:59705-59724 | Msa1383350:intron | 50.0% | |
| ! | TAGCGGATACGATACCAGAC+CGG | + | tig0020594:59727-59746 | None:intergenic | 50.0% |
| ATCCGCTAGACACAGTTCGT+CGG | - | tig0020594:59739-59758 | Msa1383350:CDS | 50.0% | |
| ! | CGGAGAATGATGATGCAGTC+TGG | - | tig0020594:59759-59778 | Msa1383350:CDS | 50.0% |
| !! | TCGAGGGTGCTATTGTACAC+CGG | + | tig0020594:59795-59814 | None:intergenic | 50.0% |
| ! | GATTTTCCTCCAGCAGTCGA+GGG | + | tig0020594:59811-59830 | None:intergenic | 50.0% |
| ! | AGATTTTCCTCCAGCAGTCG+AGG | + | tig0020594:59812-59831 | None:intergenic | 50.0% |
| ACACATTCGAAACTGCTCCG+CGG | + | tig0020594:59863-59882 | None:intergenic | 50.0% | |
| ACGCGATCTTATGGCTGGTG+CGG | - | tig0020594:56132-56151 | Msa1383350:exon | 55.0% | |
| TCTTATGGCTGGTGCGGTGA+TGG | - | tig0020594:56138-56157 | Msa1383350:exon | 55.0% | |
| CTTATGGCTGGTGCGGTGAT+GGG | - | tig0020594:56139-56158 | Msa1383350:exon | 55.0% | |
| TAGGGTTCCTCTTCCGCGAT+AGG | - | tig0020594:56972-56991 | Msa1383350:intron | 55.0% | |
| CTTGCCTTTATGTGTGGCCG+TGG | - | tig0020594:57249-57268 | Msa1383350:intron | 55.0% | |
| !! | GTATGGGATGGGCTAGACTG+AGG | + | tig0020594:57395-57414 | None:intergenic | 55.0% |
| !!! | GCCCTGACCCGTGTTTTGAT+CGG | - | tig0020594:57444-57463 | Msa1383350:intron | 55.0% |
| GGGCAGGGAGGAAGAATACT+GGG | - | tig0020594:58181-58200 | Msa1383350:intron | 55.0% | |
| GGCAGGGAGGAAGAATACTG+GGG | - | tig0020594:58182-58201 | Msa1383350:intron | 55.0% | |
| GCAGGGAGGAAGAATACTGG+GGG | - | tig0020594:58183-58202 | Msa1383350:intron | 55.0% | |
| GAACTGATGCATCGTGGGCT+AGG | - | tig0020594:58751-58770 | Msa1383350:intron | 55.0% | |
| !! | CAGGGCACTTTTCAGTCAGG+TGG | - | tig0020594:58810-58829 | Msa1383350:intron | 55.0% |
| TTTGTTGCTGGAGCTGCAGC+AGG | - | tig0020594:59399-59418 | Msa1383350:intron | 55.0% | |
| GGCGGGTGTGTGCAATATCA+AGG | + | tig0020594:59452-59471 | None:intergenic | 55.0% | |
| TCCAATGTCAGCAGCAAGGC+GGG | + | tig0020594:59469-59488 | None:intergenic | 55.0% | |
| GCCTTGCTGCTGACATTGGA+AGG | - | tig0020594:59469-59488 | Msa1383350:intron | 55.0% | |
| ! | ACGGAAGTGCGTCAATTCCG+AGG | - | tig0020594:59492-59511 | Msa1383350:intron | 55.0% |
| TTCCAGAAAGACGGGGTACG+GGG | - | tig0020594:59540-59559 | Msa1383350:intron | 55.0% | |
| AGTTGGCGTTGTGGAAGCGA+TGG | - | tig0020594:59673-59692 | Msa1383350:intron | 55.0% | |
| AGTTACAACCTCAGCCGGTC+TGG | - | tig0020594:59710-59729 | Msa1383350:intron | 55.0% | |
| ATACGATACCAGACCGGCTG+AGG | + | tig0020594:59721-59740 | None:intergenic | 55.0% | |
| CTCCGACGAACTGTGTCTAG+CGG | + | tig0020594:59744-59763 | None:intergenic | 55.0% | |
| GCAGTCTGGCATGGAACATC+CGG | - | tig0020594:59773-59792 | Msa1383350:CDS | 55.0% | |
| ACAATAGCACCCTCGACTGC+TGG | - | tig0020594:59799-59818 | Msa1383350:CDS | 55.0% | |
| !! | GTTCTGTATGGTGGTGGCCG+CGG | + | tig0020594:55858-55877 | None:intergenic | 60.0% |
| !! | GGGTAAACTGGTGCTGACCG+TGG | + | tig0020594:56940-56959 | None:intergenic | 60.0% |
| ACGGCCACGGCCACACATAA+AGG | + | tig0020594:57256-57275 | None:intergenic | 60.0% | |
| CCTCCCTGCCCGTTTGTTTC+AGG | + | tig0020594:58172-58191 | None:intergenic | 60.0% | |
| CCTGAAACAAACGGGCAGGG+AGG | - | tig0020594:58169-58188 | Msa1383350:intron | 60.0% | |
| CGGGCAGGGAGGAAGAATAC+TGG | - | tig0020594:58180-58199 | Msa1383350:intron | 60.0% | |
| !! | GCATCGTGGGCTAGGCATCT+TGG | - | tig0020594:58759-58778 | Msa1383350:intron | 60.0% |
| ACCCGCCTTGCTGCTGACAT+TGG | - | tig0020594:59465-59484 | Msa1383350:intron | 60.0% | |
| TCCAGAAAGACGGGGTACGG+GGG | - | tig0020594:59541-59560 | Msa1383350:intron | 60.0% | |
| ACGGGGTACGGGGGATTTAC+AGG | - | tig0020594:59550-59569 | Msa1383350:intron | 60.0% | |
| CGGGGTACGGGGGATTTACA+GGG | - | tig0020594:59551-59570 | Msa1383350:intron | 60.0% | |
| GGGGTACGGGGGATTTACAG+GGG | - | tig0020594:59552-59571 | Msa1383350:intron | 60.0% | |
| CGCTTCCACAACGCCAACTC+AGG | + | tig0020594:59672-59691 | None:intergenic | 60.0% | |
| GGCGTTGTGGAAGCGATGGA+TGG | - | tig0020594:59677-59696 | Msa1383350:intron | 60.0% | |
| ATAGCACCCTCGACTGCTGG+AGG | - | tig0020594:59802-59821 | Msa1383350:CDS | 60.0% | |
| !! | TATGGTGGTGGCCGCGGACA+AGG | + | tig0020594:55852-55871 | None:intergenic | 65.0% |
| !! | ATGGCTGGTGCGGTGATGGG+TGG | - | tig0020594:56142-56161 | Msa1383350:exon | 65.0% |
| !! | TGGTGCGGTGATGGGTGGTG+CGG | - | tig0020594:56147-56166 | Msa1383350:exon | 65.0% |
| TCCCCCGTACCCCGTCTTTC+TGG | + | tig0020594:59545-59564 | None:intergenic | 65.0% | |
| GTGGTGGCCGCGGACAAGGT+AGG | + | tig0020594:55848-55867 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020594 | gene | 55791 | 60317 | 55791 | ID=Msa1383350;Name=Msa1383350 |
| tig0020594 | mRNA | 55791 | 60317 | 55791 | ID=Msa1383350-mRNA-1;Parent=Msa1383350;Name=Msa1383350-mRNA-1;_AED=0.15;_eAED=0.15;_QI=252|1|1|1|1|1|2|358|326 |
| tig0020594 | exon | 55791 | 56784 | 55791 | ID=Msa1383350-mRNA-1:exon:8576;Parent=Msa1383350-mRNA-1 |
| tig0020594 | exon | 59721 | 60317 | 59721 | ID=Msa1383350-mRNA-1:exon:8575;Parent=Msa1383350-mRNA-1 |
| tig0020594 | five_prime_UTR | 60066 | 60317 | 60066 | ID=Msa1383350-mRNA-1:five_prime_utr;Parent=Msa1383350-mRNA-1 |
| tig0020594 | CDS | 59721 | 60065 | 59721 | ID=Msa1383350-mRNA-1:cds;Parent=Msa1383350-mRNA-1 |
| tig0020594 | CDS | 56149 | 56784 | 56149 | ID=Msa1383350-mRNA-1:cds;Parent=Msa1383350-mRNA-1 |
| tig0020594 | three_prime_UTR | 55791 | 56148 | 55791 | ID=Msa1383350-mRNA-1:three_prime_utr;Parent=Msa1383350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
