Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365860 | XP_003591984.1 | 98.452 | 323 | 5 | 0 | 1 | 323 | 1 | 323 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365860 | sp|Q6GKV1|GET4_ARATH | 64.923 | 325 | 109 | 3 | 1 | 321 | 1 | 324 | 1.48e-158 | 449 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365860 | G7I9N6 | 98.452 | 323 | 5 | 0 | 1 | 323 | 1 | 323 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1365860 | -0.802259 | 6.107199e-49 | -8.615850e-47 |
| Msa0004060 | Msa1365860 | 0.850273 | 1.888772e-60 | -8.615850e-47 |
| Msa0006880 | Msa1365860 | 0.896243 | 4.446873e-76 | -8.615850e-47 |
| Msa0007850 | Msa1365860 | 0.839830 | 1.253136e-57 | -8.615850e-47 |
| Msa0008840 | Msa1365860 | 0.840125 | 1.049784e-57 | -8.615850e-47 |
| Msa0010500 | Msa1365860 | 0.812398 | 4.324646e-51 | -8.615850e-47 |
| Msa0015140 | Msa1365860 | 0.802449 | 5.580516e-49 | -8.615850e-47 |
| Msa0015680 | Msa1365860 | 0.806595 | 7.620784e-50 | -8.615850e-47 |
| Msa0017890 | Msa1365860 | 0.803024 | 4.246153e-49 | -8.615850e-47 |
| Msa0026660 | Msa1365860 | 0.834157 | 3.524934e-56 | -8.615850e-47 |
| Msa0027580 | Msa1365860 | 0.818721 | 1.690549e-52 | -8.615850e-47 |
| Msa0029260 | Msa1365860 | 0.849230 | 3.694041e-60 | -8.615850e-47 |
| Msa0033880 | Msa1365860 | 0.837908 | 3.937692e-57 | -8.615850e-47 |
| Msa0036370 | Msa1365860 | 0.821289 | 4.369360e-53 | -8.615850e-47 |
| Msa0043170 | Msa1365860 | 0.803070 | 4.154789e-49 | -8.615850e-47 |
| Msa0047250 | Msa1365860 | 0.812011 | 5.254196e-51 | -8.615850e-47 |
| Msa0047820 | Msa1365860 | 0.840051 | 1.097050e-57 | -8.615850e-47 |
| Msa0052300 | Msa1365860 | -0.824714 | 6.950371e-54 | -8.615850e-47 |
| Msa0052350 | Msa1365860 | -0.855324 | 6.811451e-62 | -8.615850e-47 |
| Msa0052860 | Msa1365860 | 0.819834 | 9.433720e-53 | -8.615850e-47 |
| Msa0055100 | Msa1365860 | 0.833967 | 3.933530e-56 | -8.615850e-47 |
| Msa0055150 | Msa1365860 | 0.900077 | 1.050307e-77 | -8.615850e-47 |
| Msa0056270 | Msa1365860 | 0.816481 | 5.409457e-52 | -8.615850e-47 |
| Msa0057140 | Msa1365860 | 0.822639 | 2.126614e-53 | -8.615850e-47 |
| Msa0057750 | Msa1365860 | 0.824523 | 7.709699e-54 | -8.615850e-47 |
| Msa0059950 | Msa1365860 | 0.813878 | 2.047473e-51 | -8.615850e-47 |
| Msa0061970 | Msa1365860 | 0.839193 | 1.834857e-57 | -8.615850e-47 |
| Msa0065010 | Msa1365860 | 0.801522 | 8.653893e-49 | -8.615850e-47 |
| Msa0068020 | Msa1365860 | 0.806636 | 7.472949e-50 | -8.615850e-47 |
| Msa0068760 | Msa1365860 | 0.810580 | 1.073931e-50 | -8.615850e-47 |
| Msa0070960 | Msa1365860 | 0.818701 | 1.708449e-52 | -8.615850e-47 |
| Msa0075340 | Msa1365860 | 0.818386 | 2.013716e-52 | -8.615850e-47 |
| Msa0077010 | Msa1365860 | 0.838690 | 2.475588e-57 | -8.615850e-47 |
| Msa0077900 | Msa1365860 | 0.806299 | 8.798657e-50 | -8.615850e-47 |
| Msa0090030 | Msa1365860 | 0.857038 | 2.142830e-62 | -8.615850e-47 |
| Msa0092170 | Msa1365860 | 0.895056 | 1.376590e-75 | -8.615850e-47 |
| Msa0093010 | Msa1365860 | 0.801410 | 9.123282e-49 | -8.615850e-47 |
| Msa0093960 | Msa1365860 | 0.813253 | 2.811004e-51 | -8.615850e-47 |
| Msa0097360 | Msa1365860 | -0.830383 | 3.029691e-55 | -8.615850e-47 |
| Msa0097600 | Msa1365860 | 0.800862 | 1.180870e-48 | -8.615850e-47 |
| Msa0097950 | Msa1365860 | 0.805187 | 1.506553e-49 | -8.615850e-47 |
| Msa0098150 | Msa1365860 | 0.802283 | 6.037702e-49 | -8.615850e-47 |
| Msa0099510 | Msa1365860 | 0.808605 | 2.852523e-50 | -8.615850e-47 |
| Msa0100800 | Msa1365860 | 0.862824 | 3.853883e-64 | -8.615850e-47 |
| Msa0101180 | Msa1365860 | 0.843319 | 1.507960e-58 | -8.615850e-47 |
| Msa0103070 | Msa1365860 | 0.824113 | 9.621988e-54 | -8.615850e-47 |
| Msa0104610 | Msa1365860 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0108870 | Msa1365860 | 0.827672 | 1.374457e-54 | -8.615850e-47 |
| Msa0112300 | Msa1365860 | -0.820345 | 7.205225e-53 | -8.615850e-47 |
| Msa0115370 | Msa1365860 | 0.837126 | 6.247922e-57 | -8.615850e-47 |
| Msa0120540 | Msa1365860 | 0.802466 | 5.537329e-49 | -8.615850e-47 |
| Msa1345040 | Msa1365860 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa1345450 | Msa1365860 | 0.813083 | 3.062725e-51 | -8.615850e-47 |
| Msa1349570 | Msa1365860 | 0.807696 | 4.455666e-50 | -8.615850e-47 |
| Msa1355700 | Msa1365860 | 0.840878 | 6.668825e-58 | -8.615850e-47 |
| Msa1362090 | Msa1365860 | 0.800823 | 1.202747e-48 | -8.615850e-47 |
| Msa1362420 | Msa1365860 | 0.801721 | 7.877175e-49 | -8.615850e-47 |
| Msa1363700 | Msa1365860 | 0.854951 | 8.742090e-62 | -8.615850e-47 |
| Msa1364210 | Msa1365860 | 0.807880 | 4.072200e-50 | -8.615850e-47 |
| Msa1365860 | Msa1369190 | 0.808525 | 2.967803e-50 | -8.615850e-47 |
| Msa1365860 | Msa1369490 | 0.800272 | 1.558190e-48 | -8.615850e-47 |
| Msa1365860 | Msa1371090 | 0.843880 | 1.067139e-58 | -8.615850e-47 |
| Msa1365860 | Msa1372310 | 0.816765 | 4.670547e-52 | -8.615850e-47 |
| Msa1365860 | Msa1383350 | 0.822832 | 1.917954e-53 | -8.615850e-47 |
| Msa1365860 | Msa1389850 | 0.800292 | 1.543542e-48 | -8.615850e-47 |
| Msa1365860 | Msa1397940 | 0.811426 | 7.042874e-51 | -8.615850e-47 |
| Msa1365860 | Msa1408150 | 0.844735 | 6.287212e-59 | -8.615850e-47 |
| Msa1365860 | Msa1418960 | -0.854529 | 1.158523e-61 | -8.615850e-47 |
| Msa1365860 | Msa1426920 | 0.824782 | 6.698473e-54 | -8.615850e-47 |
| Msa1365860 | Msa1435750 | 0.804958 | 1.682438e-49 | -8.615850e-47 |
| Msa1365860 | Msa1435770 | 0.801824 | 7.501900e-49 | -8.615850e-47 |
| Msa1365860 | Msa1438640 | 0.825348 | 4.922600e-54 | -8.615850e-47 |
| Msa1365860 | Msa1442850 | 0.822735 | 2.020024e-53 | -8.615850e-47 |
| Msa1365860 | Msa1452470 | 0.806570 | 7.714645e-50 | -8.615850e-47 |
| Msa1365860 | Msa1462860 | 0.807177 | 5.740848e-50 | -8.615850e-47 |
| Msa1365860 | Msa1465080 | 0.807382 | 5.193636e-50 | -8.615850e-47 |
| Msa0603570 | Msa1365860 | 0.810016 | 1.421357e-50 | -8.615850e-47 |
| Msa0603670 | Msa1365860 | 0.816885 | 4.390029e-52 | -8.615850e-47 |
| Msa0607510 | Msa1365860 | 0.830655 | 2.599194e-55 | -8.615850e-47 |
| Msa0609000 | Msa1365860 | 0.855311 | 6.869197e-62 | -8.615850e-47 |
| Msa0610090 | Msa1365860 | 0.815451 | 9.181706e-52 | -8.615850e-47 |
| Msa0610390 | Msa1365860 | 0.844268 | 8.400438e-59 | -8.615850e-47 |
| Msa0614990 | Msa1365860 | 0.811995 | 5.295304e-51 | -8.615850e-47 |
| Msa0618200 | Msa1365860 | -0.806428 | 8.266813e-50 | -8.615850e-47 |
| Msa0618930 | Msa1365860 | 0.855791 | 4.978276e-62 | -8.615850e-47 |
| Msa0619920 | Msa1365860 | 0.847385 | 1.195597e-59 | -8.615850e-47 |
| Msa0620330 | Msa1365860 | 0.850186 | 1.997749e-60 | -8.615850e-47 |
| Msa0624550 | Msa1365860 | -0.816879 | 4.404893e-52 | -8.615850e-47 |
| Msa0626680 | Msa1365860 | 0.809572 | 1.770940e-50 | -8.615850e-47 |
| Msa0626940 | Msa1365860 | 0.823971 | 1.039261e-53 | -8.615850e-47 |
| Msa0628290 | Msa1365860 | 0.832563 | 8.801896e-56 | -8.615850e-47 |
| Msa0631350 | Msa1365860 | 0.820538 | 6.504279e-53 | -8.615850e-47 |
| Msa0633570 | Msa1365860 | 0.809346 | 1.980227e-50 | -8.615850e-47 |
| Msa0646130 | Msa1365860 | 0.808466 | 3.055407e-50 | -8.615850e-47 |
| Msa0647930 | Msa1365860 | 0.820694 | 5.991924e-53 | -8.615850e-47 |
| Msa0647950 | Msa1365860 | 0.815137 | 1.078480e-51 | -8.615850e-47 |
| Msa0650920 | Msa1365860 | 0.827515 | 1.499353e-54 | -8.615850e-47 |
| Msa0652300 | Msa1365860 | 0.852548 | 4.295307e-61 | -8.615850e-47 |
| Msa0654870 | Msa1365860 | 0.806267 | 8.939374e-50 | -8.615850e-47 |
| Msa0658480 | Msa1365860 | 0.819847 | 9.366874e-53 | -8.615850e-47 |
| Msa0659140 | Msa1365860 | 0.830510 | 2.820734e-55 | -8.615850e-47 |
| Msa0659990 | Msa1365860 | 0.817954 | 2.521907e-52 | -8.615850e-47 |
| Msa0661090 | Msa1365860 | 0.831269 | 1.837122e-55 | -8.615850e-47 |
| Msa0662630 | Msa1365860 | 0.813299 | 2.746582e-51 | -8.615850e-47 |
| Msa0663900 | Msa1365860 | 0.803751 | 3.001959e-49 | -8.615850e-47 |
| Msa0664760 | Msa1365860 | 0.812071 | 5.097107e-51 | -8.615850e-47 |
| Msa0666230 | Msa1365860 | 0.808871 | 2.502786e-50 | -8.615850e-47 |
| Msa0668460 | Msa1365860 | -0.812612 | 3.884584e-51 | -8.615850e-47 |
| Msa0669720 | Msa1365860 | 0.831032 | 2.100806e-55 | -8.615850e-47 |
| Msa0669760 | Msa1365860 | 0.831369 | 1.735827e-55 | -8.615850e-47 |
| Msa0683780 | Msa1365860 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0692940 | Msa1365860 | 0.810627 | 1.049336e-50 | -8.615850e-47 |
| Msa0693790 | Msa1365860 | 0.812258 | 4.641612e-51 | -8.615850e-47 |
| Msa0694840 | Msa1365860 | 0.848701 | 5.181228e-60 | -8.615850e-47 |
| Msa0704800 | Msa1365860 | 0.821551 | 3.801418e-53 | -8.615850e-47 |
| Msa0705000 | Msa1365860 | 0.807529 | 4.835923e-50 | -8.615850e-47 |
| Msa0705040 | Msa1365860 | 0.809430 | 1.899370e-50 | -8.615850e-47 |
| Msa0705600 | Msa1365860 | 0.827018 | 1.971751e-54 | -8.615850e-47 |
| Msa0706390 | Msa1365860 | 0.835952 | 1.243520e-56 | -8.615850e-47 |
| Msa0707390 | Msa1365860 | 0.871425 | 6.904357e-67 | -8.615850e-47 |
| Msa0719420 | Msa1365860 | 0.801379 | 9.259706e-49 | -8.615850e-47 |
| Msa0726080 | Msa1365860 | 0.839504 | 1.523542e-57 | -8.615850e-47 |
| Msa0733480 | Msa1365860 | 0.807226 | 5.606374e-50 | -8.615850e-47 |
| Msa0735310 | Msa1365860 | 0.817162 | 3.805265e-52 | -8.615850e-47 |
| Msa0736570 | Msa1365860 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
| Msa0744090 | Msa1365860 | 0.800285 | 1.548106e-48 | -8.615850e-47 |
| Msa0745200 | Msa1365860 | 0.813293 | 2.754301e-51 | -8.615850e-47 |
| Msa0756930 | Msa1365860 | 0.803783 | 2.956486e-49 | -8.615850e-47 |
| Msa0758230 | Msa1365860 | 0.802595 | 5.206000e-49 | -8.615850e-47 |
| Msa0774750 | Msa1365860 | 0.813958 | 1.966422e-51 | -8.615850e-47 |
| Msa0781270 | Msa1365860 | 0.812109 | 5.000818e-51 | -8.615850e-47 |
| Msa0793390 | Msa1365860 | 0.819883 | 9.189391e-53 | -8.615850e-47 |
| Msa0805500 | Msa1365860 | 0.827133 | 1.851254e-54 | -8.615850e-47 |
| Msa0806920 | Msa1365860 | 0.845572 | 3.736149e-59 | -8.615850e-47 |
| Msa0814250 | Msa1365860 | 0.810677 | 1.023398e-50 | -8.615850e-47 |
| Msa0817260 | Msa1365860 | 0.804563 | 2.034813e-49 | -8.615850e-47 |
| Msa0818770 | Msa1365860 | 0.813291 | 2.757812e-51 | -8.615850e-47 |
| Msa0819060 | Msa1365860 | 0.826577 | 2.512826e-54 | -8.615850e-47 |
| Msa0820530 | Msa1365860 | -0.828869 | 7.073598e-55 | -8.615850e-47 |
| Msa0822170 | Msa1365860 | 0.820736 | 5.857669e-53 | -8.615850e-47 |
| Msa0822180 | Msa1365860 | 0.809216 | 2.111209e-50 | -8.615850e-47 |
| Msa0823500 | Msa1365860 | 0.849431 | 3.248858e-60 | -8.615850e-47 |
| Msa0825270 | Msa1365860 | 0.807157 | 5.797538e-50 | -8.615850e-47 |
| Msa0825280 | Msa1365860 | 0.800229 | 1.589770e-48 | -8.615850e-47 |
| Msa0826500 | Msa1365860 | 0.801404 | 9.150853e-49 | -8.615850e-47 |
| Msa0827280 | Msa1365860 | 0.817643 | 2.964464e-52 | -8.615850e-47 |
| Msa0828680 | Msa1365860 | 0.812199 | 4.781741e-51 | -8.615850e-47 |
| Msa0836500 | Msa1365860 | 0.822352 | 2.479841e-53 | -8.615850e-47 |
| Msa0839200 | Msa1365860 | 0.813717 | 2.222020e-51 | -8.615850e-47 |
| Msa0121820 | Msa1365860 | 0.851152 | 1.068731e-60 | -8.615850e-47 |
| Msa0126770 | Msa1365860 | 0.810012 | 1.424023e-50 | -8.615850e-47 |
| Msa0126840 | Msa1365860 | 0.800202 | 1.609590e-48 | -8.615850e-47 |
| Msa0126880 | Msa1365860 | 0.836123 | 1.125075e-56 | -8.615850e-47 |
| Msa0127040 | Msa1365860 | 0.828750 | 7.555887e-55 | -8.615850e-47 |
| Msa0127850 | Msa1365860 | 0.843874 | 1.071292e-58 | -8.615850e-47 |
| Msa0131450 | Msa1365860 | 0.930977 | 7.450501e-94 | -8.615850e-47 |
| Msa0138160 | Msa1365860 | 0.818226 | 2.188843e-52 | -8.615850e-47 |
| Msa0140400 | Msa1365860 | 0.837960 | 3.818613e-57 | -8.615850e-47 |
| Msa0145150 | Msa1365860 | 0.805481 | 1.307672e-49 | -8.615850e-47 |
| Msa0155430 | Msa1365860 | 0.818238 | 2.175952e-52 | -8.615850e-47 |
| Msa0165440 | Msa1365860 | 0.830419 | 2.968035e-55 | -8.615850e-47 |
| Msa0165950 | Msa1365860 | 0.831654 | 1.476518e-55 | -8.615850e-47 |
| Msa0166750 | Msa1365860 | 0.888989 | 3.617576e-73 | -8.615850e-47 |
| Msa0169300 | Msa1365860 | 0.847146 | 1.390734e-59 | -8.615850e-47 |
| Msa0173170 | Msa1365860 | 0.821541 | 3.821848e-53 | -8.615850e-47 |
| Msa0173330 | Msa1365860 | 0.800299 | 1.538268e-48 | -8.615850e-47 |
| Msa0174000 | Msa1365860 | 0.830082 | 3.588455e-55 | -8.615850e-47 |
| Msa0175200 | Msa1365860 | 0.816182 | 6.308488e-52 | -8.615850e-47 |
| Msa0175290 | Msa1365860 | -0.826718 | 2.326617e-54 | -8.615850e-47 |
| Msa0176330 | Msa1365860 | 0.803949 | 2.730470e-49 | -8.615850e-47 |
| Msa0177230 | Msa1365860 | 0.813176 | 2.921571e-51 | -8.615850e-47 |
| Msa0177270 | Msa1365860 | 0.863015 | 3.364560e-64 | -8.615850e-47 |
| Msa0180120 | Msa1365860 | 0.828194 | 1.029637e-54 | -8.615850e-47 |
| Msa0182280 | Msa1365860 | 0.830372 | 3.047553e-55 | -8.615850e-47 |
| Msa0183460 | Msa1365860 | 0.861655 | 8.807795e-64 | -8.615850e-47 |
| Msa0183870 | Msa1365860 | 0.814381 | 1.585791e-51 | -8.615850e-47 |
| Msa0186310 | Msa1365860 | 0.807523 | 4.847843e-50 | -8.615850e-47 |
| Msa0198530 | Msa1365860 | 0.801610 | 8.300311e-49 | -8.615850e-47 |
| Msa0199690 | Msa1365860 | 0.826000 | 3.448579e-54 | -8.615850e-47 |
| Msa0208810 | Msa1365860 | 0.833604 | 4.846881e-56 | -8.615850e-47 |
| Msa0211650 | Msa1365860 | 0.842189 | 3.010183e-58 | -8.615850e-47 |
| Msa0212750 | Msa1365860 | -0.803986 | 2.683151e-49 | -8.615850e-47 |
| Msa0229360 | Msa1365860 | 0.828536 | 8.512059e-55 | -8.615850e-47 |
| Msa0231880 | Msa1365860 | 0.805508 | 1.290291e-49 | -8.615850e-47 |
| Msa0236270 | Msa1365860 | 0.807963 | 3.909736e-50 | -8.615850e-47 |
| Msa1226610 | Msa1365860 | 0.820162 | 7.934989e-53 | -8.615850e-47 |
| Msa1226720 | Msa1365860 | 0.805192 | 1.502873e-49 | -8.615850e-47 |
| Msa1227690 | Msa1365860 | 0.837641 | 4.611127e-57 | -8.615850e-47 |
| Msa1234980 | Msa1365860 | 0.838058 | 3.603297e-57 | -8.615850e-47 |
| Msa1246530 | Msa1365860 | -0.808954 | 2.402363e-50 | -8.615850e-47 |
| Msa1253810 | Msa1365860 | 0.846415 | 2.203523e-59 | -8.615850e-47 |
| Msa1254710 | Msa1365860 | 0.826785 | 2.241731e-54 | -8.615850e-47 |
| Msa1256770 | Msa1365860 | 0.816087 | 6.625100e-52 | -8.615850e-47 |
| Msa1269300 | Msa1365860 | 0.850276 | 1.885702e-60 | -8.615850e-47 |
| Msa1270620 | Msa1365860 | 0.834170 | 3.499407e-56 | -8.615850e-47 |
| Msa1270690 | Msa1365860 | 0.826211 | 3.071782e-54 | -8.615850e-47 |
| Msa1282240 | Msa1365860 | 0.831968 | 1.235281e-55 | -8.615850e-47 |
| Msa1294840 | Msa1365860 | 0.849353 | 3.415080e-60 | -8.615850e-47 |
| Msa1294960 | Msa1365860 | 0.839330 | 1.690134e-57 | -8.615850e-47 |
| Msa1295490 | Msa1365860 | -0.809546 | 1.793634e-50 | -8.615850e-47 |
| Msa1299700 | Msa1365860 | 0.806585 | 7.658192e-50 | -8.615850e-47 |
| Msa1301750 | Msa1365860 | 0.808172 | 3.528881e-50 | -8.615850e-47 |
| Msa1306990 | Msa1365860 | 0.812430 | 4.255889e-51 | -8.615850e-47 |
| Msa1310690 | Msa1365860 | 0.845070 | 5.105862e-59 | -8.615850e-47 |
| Msa1317270 | Msa1365860 | 0.828593 | 8.249746e-55 | -8.615850e-47 |
| Msa1330890 | Msa1365860 | -0.811953 | 5.409163e-51 | -8.615850e-47 |
| Msa1331250 | Msa1365860 | 0.812480 | 4.150188e-51 | -8.615850e-47 |
| Msa1331710 | Msa1365860 | 0.819253 | 1.279495e-52 | -8.615850e-47 |
| Msa1336560 | Msa1365860 | 0.800952 | 1.132237e-48 | -8.615850e-47 |
| Msa1340830 | Msa1365860 | 0.837534 | 4.912052e-57 | -8.615850e-47 |
| Msa0365860 | Msa1365860 | 0.815625 | 8.400047e-52 | -8.615850e-47 |
| Msa0370160 | Msa1365860 | -0.806890 | 6.603000e-50 | -8.615850e-47 |
| Msa0376690 | Msa1365860 | 0.824284 | 8.771800e-54 | -8.615850e-47 |
| Msa0381700 | Msa1365860 | 0.814058 | 1.869518e-51 | -8.615850e-47 |
| Msa0384670 | Msa1365860 | 0.811563 | 6.577935e-51 | -8.615850e-47 |
| Msa0384880 | Msa1365860 | 0.897218 | 1.739492e-76 | -8.615850e-47 |
| Msa0385490 | Msa1365860 | 0.805802 | 1.119663e-49 | -8.615850e-47 |
| Msa0387910 | Msa1365860 | 0.806874 | 6.655841e-50 | -8.615850e-47 |
| Msa0419520 | Msa1365860 | 0.841622 | 4.249723e-58 | -8.615850e-47 |
| Msa0427860 | Msa1365860 | -0.808984 | 2.366841e-50 | -8.615850e-47 |
| Msa0436190 | Msa1365860 | 0.816728 | 4.762569e-52 | -8.615850e-47 |
| Msa0436200 | Msa1365860 | 0.815993 | 6.952212e-52 | -8.615850e-47 |
| Msa0437690 | Msa1365860 | -0.814632 | 1.395721e-51 | -8.615850e-47 |
| Msa0439890 | Msa1365860 | 0.873126 | 1.871682e-67 | -8.615850e-47 |
| Msa0462880 | Msa1365860 | 0.804440 | 2.157736e-49 | -8.615850e-47 |
| Msa0465550 | Msa1365860 | 0.844630 | 6.713632e-59 | -8.615850e-47 |
| Msa0471590 | Msa1365860 | 0.816789 | 4.613177e-52 | -8.615850e-47 |
| Msa0474700 | Msa1365860 | 0.826611 | 2.467581e-54 | -8.615850e-47 |
| Msa0478580 | Msa1365860 | 0.812579 | 3.949915e-51 | -8.615850e-47 |
| Msa0479330 | Msa1365860 | 0.832415 | 9.575567e-56 | -8.615850e-47 |
| Msa0481480 | Msa1365860 | 0.804193 | 2.428937e-49 | -8.615850e-47 |
| Msa0981430 | Msa1365860 | 0.827561 | 1.461308e-54 | -8.615850e-47 |
| Msa0993240 | Msa1365860 | 0.814734 | 1.324623e-51 | -8.615850e-47 |
| Msa1001350 | Msa1365860 | 0.845260 | 4.537548e-59 | -8.615850e-47 |
| Msa1002600 | Msa1365860 | -0.804376 | 2.225279e-49 | -8.615850e-47 |
| Msa1003440 | Msa1365860 | 0.802300 | 5.988866e-49 | -8.615850e-47 |
| Msa1025260 | Msa1365860 | 0.833199 | 6.117710e-56 | -8.615850e-47 |
| Msa1025940 | Msa1365860 | 0.865732 | 4.769133e-65 | -8.615850e-47 |
| Msa1029970 | Msa1365860 | 0.840334 | 9.259155e-58 | -8.615850e-47 |
| Msa1033520 | Msa1365860 | 0.815487 | 9.015169e-52 | -8.615850e-47 |
| Msa1036550 | Msa1365860 | 0.823788 | 1.146932e-53 | -8.615850e-47 |
| Msa1040800 | Msa1365860 | 0.806591 | 7.634791e-50 | -8.615850e-47 |
| Msa1048760 | Msa1365860 | -0.823621 | 1.255349e-53 | -8.615850e-47 |
| Msa1069660 | Msa1365860 | -0.810513 | 1.110213e-50 | -8.615850e-47 |
| Msa1070050 | Msa1365860 | 0.820306 | 7.353900e-53 | -8.615850e-47 |
| Msa1070390 | Msa1365860 | 0.831321 | 1.783723e-55 | -8.615850e-47 |
| Msa1071320 | Msa1365860 | 0.801675 | 8.052522e-49 | -8.615850e-47 |
| Msa1073400 | Msa1365860 | 0.833593 | 4.878570e-56 | -8.615850e-47 |
| Msa1083880 | Msa1365860 | 0.819132 | 1.363477e-52 | -8.615850e-47 |
| Msa1089320 | Msa1365860 | 0.807172 | 5.754969e-50 | -8.615850e-47 |
| Msa1089740 | Msa1365860 | -0.817326 | 3.494994e-52 | -8.615850e-47 |
| Msa1089840 | Msa1365860 | 0.851403 | 9.079617e-61 | -8.615850e-47 |
| Msa1093330 | Msa1365860 | 0.840184 | 1.012833e-57 | -8.615850e-47 |
| Msa1096230 | Msa1365860 | 0.812456 | 4.202295e-51 | -8.615850e-47 |
| Msa1100530 | Msa1365860 | -0.838380 | 2.976140e-57 | -8.615850e-47 |
| Msa1103660 | Msa1365860 | -0.814390 | 1.578691e-51 | -8.615850e-47 |
| Msa0239940 | Msa1365860 | 0.804717 | 1.888847e-49 | -8.615850e-47 |
| Msa0245060 | Msa1365860 | 0.804321 | 2.284898e-49 | -8.615850e-47 |
| Msa0251770 | Msa1365860 | 0.814449 | 1.532004e-51 | -8.615850e-47 |
| Msa0252240 | Msa1365860 | 0.817301 | 3.540970e-52 | -8.615850e-47 |
| Msa0262480 | Msa1365860 | 0.812000 | 5.284166e-51 | -8.615850e-47 |
| Msa0269470 | Msa1365860 | 0.806939 | 6.446953e-50 | -8.615850e-47 |
| Msa0274100 | Msa1365860 | 0.802516 | 5.406505e-49 | -8.615850e-47 |
| Msa0280430 | Msa1365860 | 0.852943 | 3.311785e-61 | -8.615850e-47 |
| Msa0288730 | Msa1365860 | 0.821478 | 3.952010e-53 | -8.615850e-47 |
| Msa0291520 | Msa1365860 | 0.878965 | 1.831813e-69 | -8.615850e-47 |
| Msa0296920 | Msa1365860 | 0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa0299520 | Msa1365860 | 0.810974 | 8.824779e-51 | -8.615850e-47 |
| Msa0300350 | Msa1365860 | 0.814782 | 1.293009e-51 | -8.615850e-47 |
| Msa0304290 | Msa1365860 | 0.801382 | 9.243288e-49 | -8.615850e-47 |
| Msa0304330 | Msa1365860 | 0.808214 | 3.457658e-50 | -8.615850e-47 |
| Msa0304590 | Msa1365860 | 0.816068 | 6.691616e-52 | -8.615850e-47 |
| Msa0304660 | Msa1365860 | 0.830145 | 3.463705e-55 | -8.615850e-47 |
| Msa0307560 | Msa1365860 | 0.820868 | 5.462657e-53 | -8.615850e-47 |
| Msa0308200 | Msa1365860 | 0.805123 | 1.553920e-49 | -8.615850e-47 |
| Msa0308220 | Msa1365860 | 0.808513 | 2.984384e-50 | -8.615850e-47 |
| Msa0310410 | Msa1365860 | 0.804923 | 1.711241e-49 | -8.615850e-47 |
| Msa0320610 | Msa1365860 | 0.810384 | 1.184174e-50 | -8.615850e-47 |
| Msa0331700 | Msa1365860 | 0.828453 | 8.914688e-55 | -8.615850e-47 |
| Msa0343190 | Msa1365860 | 0.804088 | 2.555231e-49 | -8.615850e-47 |
| Msa1108800 | Msa1365860 | 0.814614 | 1.408530e-51 | -8.615850e-47 |
| Msa1109350 | Msa1365860 | 0.826179 | 3.127384e-54 | -8.615850e-47 |
| Msa1113880 | Msa1365860 | 0.805879 | 1.078804e-49 | -8.615850e-47 |
| Msa1120810 | Msa1365860 | 0.834733 | 2.527120e-56 | -8.615850e-47 |
| Msa1122820 | Msa1365860 | 0.810136 | 1.339450e-50 | -8.615850e-47 |
| Msa1125500 | Msa1365860 | 0.824960 | 6.081629e-54 | -8.615850e-47 |
| Msa1126120 | Msa1365860 | -0.808784 | 2.612210e-50 | -8.615850e-47 |
| Msa1126850 | Msa1365860 | 0.819945 | 8.894053e-53 | -8.615850e-47 |
| Msa1127130 | Msa1365860 | 0.800479 | 1.413770e-48 | -8.615850e-47 |
| Msa1128330 | Msa1365860 | 0.800489 | 1.406853e-48 | -8.615850e-47 |
| Msa1129060 | Msa1365860 | -0.803099 | 4.097384e-49 | -8.615850e-47 |
| Msa1131170 | Msa1365860 | 0.830958 | 2.189956e-55 | -8.615850e-47 |
| Msa1135800 | Msa1365860 | -0.851775 | 7.126417e-61 | -8.615850e-47 |
| Msa1135810 | Msa1365860 | -0.850791 | 1.351292e-60 | -8.615850e-47 |
| Msa1138870 | Msa1365860 | 0.806146 | 9.475676e-50 | -8.615850e-47 |
| Msa1144970 | Msa1365860 | 0.813192 | 2.898228e-51 | -8.615850e-47 |
| Msa1152520 | Msa1365860 | 0.802614 | 5.160389e-49 | -8.615850e-47 |
| Msa1158230 | Msa1365860 | 0.808608 | 2.848958e-50 | -8.615850e-47 |
| Msa1160360 | Msa1365860 | 0.824037 | 1.002452e-53 | -8.615850e-47 |
| Msa1164020 | Msa1365860 | 0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa1166410 | Msa1365860 | 0.800197 | 1.613583e-48 | -8.615850e-47 |
| Msa1166870 | Msa1365860 | 0.842267 | 2.870810e-58 | -8.615850e-47 |
| Msa1171830 | Msa1365860 | 0.830606 | 2.672177e-55 | -8.615850e-47 |
| Msa1172130 | Msa1365860 | -0.814667 | 1.370851e-51 | -8.615850e-47 |
| Msa1176980 | Msa1365860 | 0.804394 | 2.206533e-49 | -8.615850e-47 |
| Msa1178050 | Msa1365860 | 0.824807 | 6.606553e-54 | -8.615850e-47 |
| Msa1179950 | Msa1365860 | 0.809771 | 1.604595e-50 | -8.615850e-47 |
| Msa1179980 | Msa1365860 | 0.830390 | 3.017457e-55 | -8.615850e-47 |
| Msa1184370 | Msa1365860 | 0.831625 | 1.500992e-55 | -8.615850e-47 |
| Msa1198880 | Msa1365860 | 0.806023 | 1.005925e-49 | -8.615850e-47 |
| Msa1201830 | Msa1365860 | 0.856041 | 4.205309e-62 | -8.615850e-47 |
| Msa1202150 | Msa1365860 | 0.825689 | 4.087994e-54 | -8.615850e-47 |
| Msa1202580 | Msa1365860 | 0.805824 | 1.107962e-49 | -8.615850e-47 |
| Msa1203880 | Msa1365860 | 0.840695 | 7.447168e-58 | -8.615850e-47 |
| Msa1203900 | Msa1365860 | 0.847217 | 1.330159e-59 | -8.615850e-47 |
| Msa1205850 | Msa1365860 | 0.824026 | 1.008610e-53 | -8.615850e-47 |
| Msa1206650 | Msa1365860 | 0.807653 | 4.549967e-50 | -8.615850e-47 |
| Msa1207730 | Msa1365860 | 0.837005 | 6.707608e-57 | -8.615850e-47 |
| Msa1211830 | Msa1365860 | 0.811147 | 8.096793e-51 | -8.615850e-47 |
| Msa0484740 | Msa1365860 | 0.801292 | 9.647041e-49 | -8.615850e-47 |
| Msa0505380 | Msa1365860 | 0.807426 | 5.084198e-50 | -8.615850e-47 |
| Msa0509950 | Msa1365860 | -0.808607 | 2.850723e-50 | -8.615850e-47 |
| Msa0511490 | Msa1365860 | 0.808576 | 2.893335e-50 | -8.615850e-47 |
| Msa0513440 | Msa1365860 | 0.838742 | 2.400672e-57 | -8.615850e-47 |
| Msa0514180 | Msa1365860 | 0.805705 | 1.173427e-49 | -8.615850e-47 |
| Msa0520140 | Msa1365860 | 0.811122 | 8.199246e-51 | -8.615850e-47 |
| Msa0523680 | Msa1365860 | 0.841652 | 4.173361e-58 | -8.615850e-47 |
| Msa0524590 | Msa1365860 | 0.807351 | 5.274088e-50 | -8.615850e-47 |
| Msa0527910 | Msa1365860 | 0.837020 | 6.649270e-57 | -8.615850e-47 |
| Msa0533960 | Msa1365860 | -0.812337 | 4.460125e-51 | -8.615850e-47 |
| Msa0534410 | Msa1365860 | 0.800651 | 1.304270e-48 | -8.615850e-47 |
| Msa0534900 | Msa1365860 | 0.800719 | 1.263226e-48 | -8.615850e-47 |
| Msa0550540 | Msa1365860 | 0.840829 | 6.870674e-58 | -8.615850e-47 |
| Msa0550570 | Msa1365860 | 0.874701 | 5.499141e-68 | -8.615850e-47 |
| Msa0556350 | Msa1365860 | 0.820504 | 6.625290e-53 | -8.615850e-47 |
| Msa0556790 | Msa1365860 | 0.850810 | 1.334846e-60 | -8.615850e-47 |
| Msa0556860 | Msa1365860 | 0.811457 | 6.935484e-51 | -8.615850e-47 |
| Msa0565620 | Msa1365860 | -0.826864 | 2.147005e-54 | -8.615850e-47 |
| Msa0578090 | Msa1365860 | 0.824643 | 7.222100e-54 | -8.615850e-47 |
| Msa0579370 | Msa1365860 | 0.805151 | 1.532910e-49 | -8.615850e-47 |
| Msa0580230 | Msa1365860 | 0.803308 | 3.708835e-49 | -8.615850e-47 |
| Msa0580950 | Msa1365860 | 0.836602 | 8.500621e-57 | -8.615850e-47 |
| Msa0581070 | Msa1365860 | 0.809432 | 1.897359e-50 | -8.615850e-47 |
| Msa0581700 | Msa1365860 | 0.804449 | 2.149260e-49 | -8.615850e-47 |
| Msa0586850 | Msa1365860 | 0.819839 | 9.407797e-53 | -8.615850e-47 |
| Msa0590650 | Msa1365860 | 0.814807 | 1.276590e-51 | -8.615850e-47 |
| Msa0593700 | Msa1365860 | 0.806366 | 8.518220e-50 | -8.615850e-47 |
| Msa0846230 | Msa1365860 | 0.835536 | 1.584626e-56 | -8.615850e-47 |
| Msa0850710 | Msa1365860 | 0.827770 | 1.301909e-54 | -8.615850e-47 |
| Msa0858440 | Msa1365860 | 0.805091 | 1.577674e-49 | -8.615850e-47 |
| Msa0861570 | Msa1365860 | 0.804705 | 1.900317e-49 | -8.615850e-47 |
| Msa0862500 | Msa1365860 | 0.849583 | 2.946010e-60 | -8.615850e-47 |
| Msa0865570 | Msa1365860 | 0.803845 | 2.870507e-49 | -8.615850e-47 |
| Msa0879860 | Msa1365860 | 0.841997 | 3.382754e-58 | -8.615850e-47 |
| Msa0888940 | Msa1365860 | 0.811113 | 8.235407e-51 | -8.615850e-47 |
| Msa0895310 | Msa1365860 | 0.804240 | 2.375284e-49 | -8.615850e-47 |
| Msa0898890 | Msa1365860 | 0.810678 | 1.022709e-50 | -8.615850e-47 |
| Msa0899290 | Msa1365860 | 0.807468 | 4.981782e-50 | -8.615850e-47 |
| Msa0899350 | Msa1365860 | 0.809502 | 1.832974e-50 | -8.615850e-47 |
| Msa0901160 | Msa1365860 | -0.803102 | 4.091978e-49 | -8.615850e-47 |
| Msa0901450 | Msa1365860 | 0.854075 | 1.566424e-61 | -8.615850e-47 |
| Msa0921870 | Msa1365860 | 0.814708 | 1.342811e-51 | -8.615850e-47 |
| Msa0924150 | Msa1365860 | -0.868664 | 5.519864e-66 | -8.615850e-47 |
| Msa0925770 | Msa1365860 | 0.819813 | 9.536745e-53 | -8.615850e-47 |
| Msa0928120 | Msa1365860 | 0.805768 | 1.138232e-49 | -8.615850e-47 |
| Msa0933290 | Msa1365860 | 0.818147 | 2.281730e-52 | -8.615850e-47 |
| Msa0937330 | Msa1365860 | 0.801311 | 9.557539e-49 | -8.615850e-47 |
| Msa0943170 | Msa1365860 | 0.808628 | 2.820863e-50 | -8.615850e-47 |
| Msa0947800 | Msa1365860 | 0.814413 | 1.560576e-51 | -8.615850e-47 |
| Msa0960830 | Msa1365860 | 0.833742 | 4.478868e-56 | -8.615850e-47 |
| Msa0963020 | Msa1365860 | 0.827852 | 1.244334e-54 | -8.615850e-47 |
| Msa0963090 | Msa1365860 | -0.824566 | 7.528713e-54 | -8.615850e-47 |
| Msa0966720 | Msa1365860 | -0.851034 | 1.154162e-60 | -8.615850e-47 |
| Msa0968440 | Msa1365860 | 0.817437 | 3.299847e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365860 | MtrunA17_Chr1g0200241 | 98.452 | 323 | 5 | 0 | 1 | 323 | 1 | 323 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365860 | AT5G63220.1 | 64.923 | 325 | 109 | 3 | 1 | 321 | 1 | 324 | 1.51e-159 | 449 |
| Msa1365860 | AT5G63220.2 | 64.706 | 323 | 109 | 3 | 1 | 319 | 1 | 322 | 8.62e-158 | 444 |
| Msa1365860 | AT5G63220.3 | 65.862 | 290 | 95 | 2 | 36 | 321 | 1 | 290 | 1.25e-144 | 409 |
Find 74 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGGTGGTCTGCTGAATT+TGG | 0.163183 | tig0018415:-15653 | Msa1365860:intron |
| CGTGATAGGTATTTATCTTT+AGG | 0.203207 | tig0018415:-14463 | Msa1365860:intron |
| AATTTCTTCAGGGACTAAAT+TGG | 0.236045 | tig0018415:+19916 | Msa1365870:five_prime_UTR |
| AACTGCATCAAGTCTGTCTT+TGG | 0.298043 | tig0018415:+14370 | None:intergenic |
| TTGTTCAAACCTGGCACTAA+TGG | 0.301789 | tig0018415:+19452 | None:intergenic |
| TTCCATTGCCACAACACCTT+TGG | 0.316717 | tig0018415:-16203 | Msa1365860:CDS |
| ATTGAGATTGAGAGGGATAA+GGG | 0.335680 | tig0018415:+19986 | Msa1365870:five_prime_UTR |
| GCCAGCATAATGTGCAGTTC+TGG | 0.337296 | tig0018415:+15611 | None:intergenic |
| GATTGAGATTGAGAGGGATA+AGG | 0.343169 | tig0018415:+19985 | Msa1365870:five_prime_UTR |
| GGGTGGAAGTTCGAATCTTT+TGG | 0.344295 | tig0018415:+19783 | None:intergenic |
| TCCATTGCCACAACACCTTT+GGG | 0.350103 | tig0018415:-16202 | Msa1365860:CDS |
| AAAATTATCGTATTTATAGA+AGG | 0.357766 | tig0018415:+19875 | None:intergenic |
| GTGAAAGATGGAAATTGTTA+TGG | 0.363625 | tig0018415:-19495 | Msa1365860:CDS |
| CCTTGTGTAATTTATTGATA+AGG | 0.366311 | tig0018415:-13373 | Msa1365860:three_prime_UTR |
| AGGAACCCCATGGGGATGTT+TGG | 0.375805 | tig0018415:-13681 | Msa1365860:CDS |
| AGAGCTTGCTTTATTGTTTG+TGG | 0.399439 | tig0018415:-16605 | Msa1365860:CDS |
| CTATTATGAATGAATGTTAT+CGG | 0.412592 | tig0018415:-13242 | Msa1365860:three_prime_UTR |
| GAAGGTTCCCTCTCAATACT+TGG | 0.417291 | tig0018415:+13972 | None:intergenic |
| CAAATATTGCAGTGTTATCC+TGG | 0.421176 | tig0018415:-15102 | Msa1365860:intron |
| ATTCTTATTATGCAGTTGAT+GGG | 0.426231 | tig0018415:-13519 | Msa1365860:intron |
| TTCAGGAGCATGCATTCAAT+TGG | 0.428017 | tig0018415:-17030 | Msa1365860:CDS |
| CATTCAATTGGCTCATGGGC+AGG | 0.436008 | tig0018415:-17018 | Msa1365860:intron |
| AAGTTAGCTGACCTCATTGA+AGG | 0.437049 | tig0018415:+13950 | None:intergenic |
| TTATCCTGGTGAAGATGATT+TGG | 0.438610 | tig0018415:-15088 | Msa1365860:CDS |
| GCATTAGATATCCTACATTC+AGG | 0.445091 | tig0018415:-17047 | Msa1365860:CDS |
| AAGATGATTTGGCCATTGCT+CGG | 0.461655 | tig0018415:-15077 | Msa1365860:CDS |
| TCCCAAAGGTGTTGTGGCAA+TGG | 0.466290 | tig0018415:+16201 | None:intergenic |
| TTCTTATTATGCAGTTGATG+GGG | 0.472820 | tig0018415:-13518 | Msa1365860:intron |
| TTGGAGAAAGTTGTGAAAGA+TGG | 0.477287 | tig0018415:-19507 | Msa1365860:CDS |
| TTGTGGAGACCTTAGTGAAA+GGG | 0.479713 | tig0018415:-16588 | Msa1365860:CDS |
| TTTATCTTTAGGTAATTTGA+AGG | 0.480180 | tig0018415:-14452 | Msa1365860:CDS |
| CCTTATGATGATGAAACTCT+TGG | 0.480823 | tig0018415:-16559 | Msa1365860:intron |
| CCAAGAGTTTCATCATCATA+AGG | 0.481713 | tig0018415:+16559 | None:intergenic |
| TAAAGCAAGCTCTGCTCCAC+AGG | 0.489032 | tig0018415:+16615 | None:intergenic |
| CATGCATTCAATTGGCTCAT+GGG | 0.491039 | tig0018415:-17022 | Msa1365860:CDS |
| TCCAGAACTGCACATTATGC+TGG | 0.493532 | tig0018415:-15612 | Msa1365860:CDS |
| GCATGCATTCAATTGGCTCA+TGG | 0.494263 | tig0018415:-17023 | Msa1365860:CDS |
| AGATGATTTGGCCATTGCTC+GGG | 0.506175 | tig0018415:-15076 | Msa1365860:CDS |
| TTTGGATCTCTGCCGCGCCA+TGG | 0.511420 | tig0018415:+19801 | None:intergenic |
| AATCTATGAAGGATTTCCTC+GGG | 0.514937 | tig0018415:-16226 | Msa1365860:CDS |
| AAAGAAGCAAACTGAATCTA+CGG | 0.518329 | tig0018415:-14404 | Msa1365860:CDS |
| TGTATAAATCCATTAGTGCC+AGG | 0.523490 | tig0018415:-19461 | Msa1365860:intron |
| AAATCTATGAAGGATTTCCT+CGG | 0.529293 | tig0018415:-16227 | Msa1365860:CDS |
| CAGCAGCTTTCAGAAAACCT+TGG | 0.536573 | tig0018415:-16165 | Msa1365860:CDS |
| GATGTTTGGAGATATATTCA+AGG | 0.542412 | tig0018415:-13667 | Msa1365860:intron |
| ATTATGAAACATACCACCTC+AGG | 0.544326 | tig0018415:+15566 | None:intergenic |
| TCTTATTATGCAGTTGATGG+GGG | 0.561375 | tig0018415:-13517 | Msa1365860:intron |
| TTTGTGGAGACCTTAGTGAA+AGG | 0.561667 | tig0018415:-16589 | Msa1365860:CDS |
| TCAACATCCCAAAGGTGTTG+TGG | 0.568924 | tig0018415:+16195 | None:intergenic |
| CCTTAAAACAGCCCGAGCAA+TGG | 0.579750 | tig0018415:+15065 | None:intergenic |
| CCTTATCAATAAATTACACA+AGG | 0.585126 | tig0018415:+13373 | None:intergenic |
| CGAACTTCCACCCGCTGATG+AGG | 0.589573 | tig0018415:-19773 | Msa1365860:intron |
| ATATCTCCAAACATCCCCAT+GGG | 0.590014 | tig0018415:+13675 | None:intergenic |
| GAATTTGGAACAAGTAGTAG+TGG | 0.594161 | tig0018415:-15638 | Msa1365860:CDS |
| ACTATAAACCAAGTATTGAG+AGG | 0.595066 | tig0018415:-13980 | Msa1365860:CDS |
| TATTTATCTAAGGTTACCTG+TGG | 0.597462 | tig0018415:-16631 | Msa1365860:intron |
| GAATGCATGCTCCTGAATGT+AGG | 0.598781 | tig0018415:+17036 | None:intergenic |
| TAGCTGACCTCATTGAAGGA+AGG | 0.611327 | tig0018415:+13954 | None:intergenic |
| TATATCTCCAAACATCCCCA+TGG | 0.619960 | tig0018415:+13674 | None:intergenic |
| ATGGCCAAATCATCTTCACC+AGG | 0.631573 | tig0018415:+15084 | None:intergenic |
| GAGGGAACCTTCCTTCAATG+AGG | 0.640670 | tig0018415:-13961 | Msa1365860:intron |
| CTATAAACCAAGTATTGAGA+GGG | 0.642760 | tig0018415:-13979 | Msa1365860:CDS |
| GTACAACGAAGGAACCCCAT+GGG | 0.645664 | tig0018415:-13690 | Msa1365860:CDS |
| GCAGAGAAATTTCATCACCA+TGG | 0.647498 | tig0018415:-19818 | Msa1365860:exon |
| GAAGGATGCAAACATACTAG+TGG | 0.647684 | tig0018415:-14434 | Msa1365860:CDS |
| TTGGGTACCTCATCAGCGGG+TGG | 0.656592 | tig0018415:+19766 | None:intergenic |
| GCATGTCATCAACATCCCAA+AGG | 0.666796 | tig0018415:+16187 | None:intergenic |
| GAAATTTCATCACCATGGCG+CGG | 0.669849 | tig0018415:-19813 | Msa1365860:exon |
| CGTACAACGAAGGAACCCCA+TGG | 0.672187 | tig0018415:-13691 | Msa1365860:CDS |
| GGTGATGAAATTTCTCTGCG+TGG | 0.673898 | tig0018415:+19822 | None:intergenic |
| TGTTGTGGCAATGGAACCCG+AGG | 0.681305 | tig0018415:+16210 | None:intergenic |
| GCAGATATGTAACTGCTCAG+AGG | 0.697282 | tig0018415:-17079 | Msa1365860:intron |
| TACAACGAAGGAACCCCATG+GGG | 0.720700 | tig0018415:-13689 | Msa1365860:CDS |
| TATCTCCAAACATCCCCATG+GGG | 0.753433 | tig0018415:+13676 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATTACAAAAATCTA+GGG | + | tig0018415:14723-14742 | None:intergenic | 10.0% |
| !! | TGCTTATAAATTATAATTAT+GGG | + | tig0018415:15559-15578 | None:intergenic | 10.0% |
| !! | ATTAAAACTAAATGTAAATT+TGG | + | tig0018415:16454-16473 | None:intergenic | 10.0% |
| !! | AGAAAAAATATAAAGTAAAA+AGG | + | tig0018415:19126-19145 | None:intergenic | 10.0% |
| !! | AAATTGGAAATTAAAAAAAC+CGG | + | tig0018415:13250-13269 | None:intergenic | 15.0% |
| !! | AAAATTATCGTATTTATAGA+AGG | + | tig0018415:13307-13326 | None:intergenic | 15.0% |
| !!! | TTAATGGATATTTAGATTTT+GGG | + | tig0018415:13434-13453 | None:intergenic | 15.0% |
| !!! | ATTAATGGATATTTAGATTT+TGG | + | tig0018415:13435-13454 | None:intergenic | 15.0% |
| !! | TAAAGAAGAAACAAAATTAA+TGG | + | tig0018415:13450-13469 | None:intergenic | 15.0% |
| !! | TAACATATACCATTAAAAAA+AGG | - | tig0018415:14145-14164 | Msa1365860:intron | 15.0% |
| !! | AACATATACCATTAAAAAAA+GGG | - | tig0018415:14146-14165 | Msa1365860:intron | 15.0% |
| !! | AATGTAGAAAAAAAAAATCT+TGG | + | tig0018415:14279-14298 | None:intergenic | 15.0% |
| !! | CATAAATATTACAAAAATCT+AGG | + | tig0018415:14724-14743 | None:intergenic | 15.0% |
| !! | GCTTATAAATTATAATTATG+GGG | + | tig0018415:15558-15577 | None:intergenic | 15.0% |
| !! | GTGCTTATAAATTATAATTA+TGG | + | tig0018415:15560-15579 | None:intergenic | 15.0% |
| !!! | TTTTATCTTCTATTTATCTA+AGG | - | tig0018415:16538-16557 | Msa1365860:intron | 15.0% |
| !!! | TATTTGGAGTATATAATATT+TGG | - | tig0018415:16867-16886 | Msa1365860:intron | 15.0% |
| !! | ATCATAACATAAATTATCTT+GGG | + | tig0018415:18218-18237 | None:intergenic | 15.0% |
| !! | TATCATAACATAAATTATCT+TGG | + | tig0018415:18219-18238 | None:intergenic | 15.0% |
| !!! | TCTTATGATTATTTTTCTAT+TGG | - | tig0018415:19377-19396 | Msa1365860:intron | 15.0% |
| !!! | AAAAAAAGTGCTATAATTAT+TGG | + | tig0018415:19749-19768 | None:intergenic | 15.0% |
| !!! | CATAATTTTCAATTTCTTCA+GGG | + | tig0018415:13276-13295 | None:intergenic | 20.0% |
| !!! | TCATAATTTTCAATTTCTTC+AGG | + | tig0018415:13277-13296 | None:intergenic | 20.0% |
| !!! | TTTATTTATTTTCGATGTAG+TGG | - | tig0018415:13516-13535 | Msa1365860:intron | 20.0% |
| !! | TTGATTGAAAATTAATGTTG+TGG | - | tig0018415:13550-13569 | Msa1365860:intron | 20.0% |
| !!! | TTGAGGTTTTTGATTAAATA+TGG | - | tig0018415:13625-13644 | Msa1365860:intron | 20.0% |
| !! | AAAAACACATAACATAAACT+TGG | + | tig0018415:13773-13792 | None:intergenic | 20.0% |
| !! | ATAGTTTATTAGATTAACTC+AGG | - | tig0018415:14567-14586 | Msa1365860:intron | 20.0% |
| !! | TAACAACATATGATGTATAA+CGG | + | tig0018415:14916-14935 | None:intergenic | 20.0% |
| !!! | ATACATCATATGTTGTTATT+TGG | - | tig0018415:14918-14937 | Msa1365860:intron | 20.0% |
| !!! | TACATCATATGTTGTTATTT+GGG | - | tig0018415:14919-14938 | Msa1365860:intron | 20.0% |
| !!! | AAATAGTTCAAACTCAATTT+TGG | + | tig0018415:15285-15304 | None:intergenic | 20.0% |
| !! | AGCAAATAAAACAAAAACTA+AGG | - | tig0018415:15424-15443 | Msa1365860:intron | 20.0% |
| !! | AAACTAAAATTACATGGTTA+TGG | + | tig0018415:15471-15490 | None:intergenic | 20.0% |
| !!! | AAAAGTATAGAAAAGTGAAA+TGG | - | tig0018415:15751-15770 | Msa1365860:intron | 20.0% |
| !! | AACTAATTTACATCTCTAAT+AGG | - | tig0018415:15871-15890 | Msa1365860:intron | 20.0% |
| !!! | TTTTATCAAGGAGTTTAAAA+AGG | - | tig0018415:15929-15948 | Msa1365860:intron | 20.0% |
| !! | ACTACTGATAAATAATTGAA+GGG | + | tig0018415:16668-16687 | None:intergenic | 20.0% |
| !! | AACTACTGATAAATAATTGA+AGG | + | tig0018415:16669-16688 | None:intergenic | 20.0% |
| !!! | TGAACTCTGTATTTTTTTAA+GGG | + | tig0018415:17221-17240 | None:intergenic | 20.0% |
| !! | AACCAAATATAAGAAAGTTA+GGG | + | tig0018415:17864-17883 | None:intergenic | 20.0% |
| !! | AAAGTAAGACAAAAATTGTT+TGG | + | tig0018415:17915-17934 | None:intergenic | 20.0% |
| !!! | TTACTTTTTATGCTAAAACT+TGG | - | tig0018415:17928-17947 | Msa1365860:intron | 20.0% |
| !! | TGACAATATGTATAATATCA+GGG | + | tig0018415:18185-18204 | None:intergenic | 20.0% |
| !! | ATGACAATATGTATAATATC+AGG | + | tig0018415:18186-18205 | None:intergenic | 20.0% |
| !! | ATTATACATATTGTCATTCT+TGG | - | tig0018415:18189-18208 | Msa1365860:intron | 20.0% |
| !! | AAATTTCATCCTAGTATAAA+TGG | + | tig0018415:18251-18270 | None:intergenic | 20.0% |
| !!! | TTTAAAATCCTTGTTTTCTT+TGG | - | tig0018415:18621-18640 | Msa1365860:intron | 20.0% |
| !! | TTTATCTTTAGGTAATTTGA+AGG | - | tig0018415:18727-18746 | Msa1365860:intron | 20.0% |
| !!! | TAATTTGTGTTCTAATCAAT+AGG | - | tig0018415:18888-18907 | Msa1365860:intron | 20.0% |
| !!! | AGTAAAAAGGTATTGAATTA+AGG | + | tig0018415:19113-19132 | None:intergenic | 20.0% |
| !!! | TTATATTTTTTCTTTGATGC+AGG | - | tig0018415:19133-19152 | Msa1365860:intron | 20.0% |
| !!! | TTTATTTTCATCTTTGTTGT+TGG | - | tig0018415:19271-19290 | Msa1365860:intron | 20.0% |
| !! | CAAATAAATCCACAAATATA+TGG | - | tig0018415:19308-19327 | Msa1365860:intron | 20.0% |
| !! | ACAAATATACCATATATTTG+TGG | + | tig0018415:19320-19339 | None:intergenic | 20.0% |
| !!! | ATAAGCAAATACTTTTGAAA+CGG | + | tig0018415:19894-19913 | Msa1365870:five_prime_UTR | 20.0% |
| !! | CTATTATGAATGAATGTTAT+CGG | - | tig0018415:19937-19956 | Msa1365860:five_prime_UTR | 20.0% |
| !!! | GAGTAATTTTTTAACGAATG+TGG | + | tig0018415:13474-13493 | None:intergenic | 25.0% |
| !!! | TTCATCATTGTTTTTGTTTC+TGG | - | tig0018415:13590-13609 | Msa1365860:intron | 25.0% |
| !!! | TCATCATTGTTTTTGTTTCT+GGG | - | tig0018415:13591-13610 | Msa1365860:intron | 25.0% |
| ! | ATTGCAGAATGTTGAAAAAT+TGG | - | tig0018415:13653-13672 | Msa1365860:intron | 25.0% |
| !!! | TAACATGACCCTTTTTTTAA+TGG | + | tig0018415:14157-14176 | None:intergenic | 25.0% |
| !!! | TGTGGGATTGTTTTTTTTAA+GGG | + | tig0018415:14344-14363 | None:intergenic | 25.0% |
| !!! | TTGTGGGATTGTTTTTTTTA+AGG | + | tig0018415:14345-14364 | None:intergenic | 25.0% |
| ! | AGGAAAAAAGTTACGAATTT+GGG | - | tig0018415:14587-14606 | Msa1365860:intron | 25.0% |
| !! | TGAACAATAGTAGTTTGTAT+TGG | - | tig0018415:14629-14648 | Msa1365860:intron | 25.0% |
| !!! | ATTTATGTTCTTTTTTGAGC+TGG | - | tig0018415:14737-14756 | Msa1365860:intron | 25.0% |
| !! | TTTCATGTAGTGTAAACTTT+TGG | - | tig0018415:14769-14788 | Msa1365860:intron | 25.0% |
| !! | TTATAGGAGTTATTTCCTTA+TGG | - | tig0018415:14812-14831 | Msa1365860:intron | 25.0% |
| !!! | ACATCATATGTTGTTATTTG+GGG | - | tig0018415:14920-14939 | Msa1365860:intron | 25.0% |
| ! | GTTTCGAAACTAAAATTACA+TGG | + | tig0018415:15477-15496 | None:intergenic | 25.0% |
| !! | AAACAAAATTATGCTTTGGA+AGG | + | tig0018415:15582-15601 | None:intergenic | 25.0% |
| ! | ACAGAAACAAAATTATGCTT+TGG | + | tig0018415:15586-15605 | None:intergenic | 25.0% |
| !! | TAGATTAGTTACAAGTTAGT+TGG | + | tig0018415:15841-15860 | None:intergenic | 25.0% |
| ! | AAAAACTCCACCAAAATTAA+TGG | + | tig0018415:15910-15929 | None:intergenic | 25.0% |
| ! | CAATTATAAGCACCTAATAA+CGG | + | tig0018415:16001-16020 | None:intergenic | 25.0% |
| ! | ATTTGGATAGAAATGTCAAA+AGG | + | tig0018415:16437-16456 | None:intergenic | 25.0% |
| ! | ATAATTGAAGGGTAAAAGAA+AGG | + | tig0018415:16657-16676 | None:intergenic | 25.0% |
| !!! | GTTATTTTCTTTTTGTCCTA+TGG | - | tig0018415:16717-16736 | Msa1365860:intron | 25.0% |
| ! | AATCTCATGGGATTAAATTA+CGG | + | tig0018415:16777-16796 | None:intergenic | 25.0% |
| !!! | ATCCCATGAGATTTTTAATT+TGG | - | tig0018415:16784-16803 | Msa1365860:intron | 25.0% |
| ! | CACCAAATTAAAAATCTCAT+GGG | + | tig0018415:16789-16808 | None:intergenic | 25.0% |
| ! | TCACCAAATTAAAAATCTCA+TGG | + | tig0018415:16790-16809 | None:intergenic | 25.0% |
| ! | CGTCTAAAAAAAATCTATGA+AGG | - | tig0018415:16942-16961 | Msa1365860:intron | 25.0% |
| !!! | CTGAACTCTGTATTTTTTTA+AGG | + | tig0018415:17222-17241 | None:intergenic | 25.0% |
| ! | TTAAATAAGTCTCTTTCAAG+TGG | - | tig0018415:17410-17429 | Msa1365860:intron | 25.0% |
| ! | TGTTTCATAATATTGCTTCT+AGG | - | tig0018415:17625-17644 | Msa1365860:intron | 25.0% |
| ! | GTTTCATAATATTGCTTCTA+GGG | - | tig0018415:17626-17645 | Msa1365860:intron | 25.0% |
| !! | TTCTACACTATTGAACTTTT+TGG | - | tig0018415:17826-17845 | Msa1365860:intron | 25.0% |
| !! | TCTACACTATTGAACTTTTT+GGG | - | tig0018415:17827-17846 | Msa1365860:intron | 25.0% |
| ! | ACCAAATATAAGAAAGTTAG+GGG | + | tig0018415:17863-17882 | None:intergenic | 25.0% |
| ! | GAACCAAATATAAGAAAGTT+AGG | + | tig0018415:17865-17884 | None:intergenic | 25.0% |
| ! | AACTTTACAAAATTCTGTTG+AGG | - | tig0018415:17885-17904 | Msa1365860:intron | 25.0% |
| ! | CATTATTCATTCTGTATTTG+TGG | - | tig0018415:18019-18038 | Msa1365860:intron | 25.0% |
| !! | TGAGAACATAATTTTCACTT+TGG | - | tig0018415:18155-18174 | Msa1365860:intron | 25.0% |
| !! | GAGAACATAATTTTCACTTT+GGG | - | tig0018415:18156-18175 | Msa1365860:intron | 25.0% |
| ! | CCTAGTATAAATGGTTATTT+AGG | + | tig0018415:18242-18261 | None:intergenic | 25.0% |
| ! | CCTAAATAACCATTTATACT+AGG | - | tig0018415:18239-18258 | Msa1365860:intron | 25.0% |
| ! | TTTGCATGCTTAAAATTTGA+AGG | - | tig0018415:18921-18940 | Msa1365860:intron | 25.0% |
| ! | TTGCATGCTTAAAATTTGAA+GGG | - | tig0018415:18922-18941 | Msa1365860:intron | 25.0% |
| ! | TATTCTTATTATGCAGTTGA+TGG | - | tig0018415:19659-19678 | Msa1365860:intron | 25.0% |
| ! | ATTCTTATTATGCAGTTGAT+GGG | - | tig0018415:19660-19679 | Msa1365860:intron | 25.0% |
| ! | CCTTATCAATAAATTACACA+AGG | + | tig0018415:19809-19828 | None:intergenic | 25.0% |
| ! | CCTTGTGTAATTTATTGATA+AGG | - | tig0018415:19806-19825 | Msa1365860:exon | 25.0% |
| !!! | TAAGCAAATACTTTTGAAAC+GGG | + | tig0018415:19893-19912 | Msa1365870:five_prime_UTR | 25.0% |
| !!! | TTTTGAGATTGAGATTGAGA+GGG | + | tig0018415:13203-13222 | None:intergenic | 30.0% |
| !! | TTAACACGTTGTTTTATCAC+CGG | - | tig0018415:13228-13247 | Msa1365860:three_prime_UTR | 30.0% |
| AATTTCTTCAGGGACTAAAT+TGG | + | tig0018415:13266-13285 | None:intergenic | 30.0% | |
| ! | ATTTTCGATGTAGTGGTTTT+TGG | - | tig0018415:13523-13542 | Msa1365860:intron | 30.0% |
| GTGAAAGATGGAAATTGTTA+TGG | - | tig0018415:13684-13703 | Msa1365860:CDS | 30.0% | |
| AACAAGAAATTGTTCAAACC+TGG | + | tig0018415:13739-13758 | None:intergenic | 30.0% | |
| ! | TTTTTGTTCTCGAAAGAATG+AGG | - | tig0018415:13788-13807 | Msa1365860:intron | 30.0% |
| ! | TTTTGTTCTCGAAAGAATGA+GGG | - | tig0018415:13789-13808 | Msa1365860:intron | 30.0% |
| ACAAGTTAAGGAGCTTAAAA+TGG | - | tig0018415:14194-14213 | Msa1365860:intron | 30.0% | |
| CAGATGAAAGGAAATAACTA+TGG | + | tig0018415:14540-14559 | None:intergenic | 30.0% | |
| CAGGAAAAAAGTTACGAATT+TGG | - | tig0018415:14586-14605 | Msa1365860:intron | 30.0% | |
| GGAAAAAAGTTACGAATTTG+GGG | - | tig0018415:14588-14607 | Msa1365860:intron | 30.0% | |
| ! | ACAATAGTAGTTTGTATTGG+TGG | - | tig0018415:14632-14651 | Msa1365860:intron | 30.0% |
| !! | GTGTAAACTTTTGGAAACTT+TGG | - | tig0018415:14778-14797 | Msa1365860:intron | 30.0% |
| ATTTCCTTATGGACAATGTT+AGG | - | tig0018415:14823-14842 | Msa1365860:intron | 30.0% | |
| !! | TGGAGTATTTTCTTATGAAC+CGG | - | tig0018415:14850-14869 | Msa1365860:intron | 30.0% |
| ACAGTTAAAAAAGTGAAGCT+TGG | + | tig0018415:14982-15001 | None:intergenic | 30.0% | |
| TGATCTAACATAACTGTAGT+GGG | + | tig0018415:15019-15038 | None:intergenic | 30.0% | |
| ATGATCTAACATAACTGTAG+TGG | + | tig0018415:15020-15039 | None:intergenic | 30.0% | |
| GTTGATGTTAGTATTACAAG+TGG | + | tig0018415:15190-15209 | None:intergenic | 30.0% | |
| GTCATTTCAATCATCATCAA+GGG | + | tig0018415:15212-15231 | None:intergenic | 30.0% | |
| ! | TGTCATTTCAATCATCATCA+AGG | + | tig0018415:15213-15232 | None:intergenic | 30.0% |
| CGAACTAGGTTATATAGATA+CGG | + | tig0018415:15243-15262 | None:intergenic | 30.0% | |
| TGTGATGTATTAGAAGATGA+AGG | - | tig0018415:15603-15622 | Msa1365860:CDS | 30.0% | |
| GTGATGTATTAGAAGATGAA+GGG | - | tig0018415:15604-15623 | Msa1365860:CDS | 30.0% | |
| ATAAATTGAAACAGTGCCAA+AGG | - | tig0018415:15680-15699 | Msa1365860:intron | 30.0% | |
| TAAATTGAAACAGTGCCAAA+GGG | - | tig0018415:15681-15700 | Msa1365860:intron | 30.0% | |
| TACATCTCTAATAGGTATAG+AGG | - | tig0018415:15879-15898 | Msa1365860:intron | 30.0% | |
| ACATCTCTAATAGGTATAGA+GGG | - | tig0018415:15880-15899 | Msa1365860:intron | 30.0% | |
| !! | AGAGGGTATACCATTAATTT+TGG | - | tig0018415:15897-15916 | Msa1365860:intron | 30.0% |
| !!! | TGGTGGAGTTTTTTTTATCA+AGG | - | tig0018415:15917-15936 | Msa1365860:intron | 30.0% |
| CGTTATTAGGTGCTTATAAT+TGG | - | tig0018415:15999-16018 | Msa1365860:intron | 30.0% | |
| ATGATCTTTATTAGCCATGT+AGG | - | tig0018415:16235-16254 | Msa1365860:CDS | 30.0% | |
| AACTAACAATTTCTCCTACA+TGG | + | tig0018415:16252-16271 | None:intergenic | 30.0% | |
| !! | GCTAAAAGTTACTTGCTTTT+AGG | - | tig0018415:16347-16366 | Msa1365860:intron | 30.0% |
| AAAAAGTGATCAAGAGAGAA+AGG | - | tig0018415:16385-16404 | Msa1365860:intron | 30.0% | |
| TAGAAATGTCAAAAGGATTC+AGG | + | tig0018415:16430-16449 | None:intergenic | 30.0% | |
| ! | TATTTATCTAAGGTTACCTG+TGG | - | tig0018415:16548-16567 | Msa1365860:intron | 30.0% |
| AATAACTTACATTGCATCAC+AGG | + | tig0018415:16703-16722 | None:intergenic | 30.0% | |
| AAATCTATGAAGGATTTCCT+CGG | - | tig0018415:16952-16971 | Msa1365860:intron | 30.0% | |
| !!! | CTCTGTATTTTTTTAAGGGT+CGG | + | tig0018415:17217-17236 | None:intergenic | 30.0% |
| GCTGTGTTATAGATATCAAA+AGG | + | tig0018415:17267-17286 | None:intergenic | 30.0% | |
| AAATTGAACTTCTACAAGCT+TGG | + | tig0018415:17311-17330 | None:intergenic | 30.0% | |
| AGCTTGTAGAAGTTCAATTT+AGG | - | tig0018415:17311-17330 | Msa1365860:intron | 30.0% | |
| !! | TTAGGCTTTGTAACTTTTGT+TGG | - | tig0018415:17329-17348 | Msa1365860:intron | 30.0% |
| TCATTCGTTTACACAAACAA+AGG | + | tig0018415:17729-17748 | None:intergenic | 30.0% | |
| !!! | ACAATTTGCTTTTTACATGC+AGG | - | tig0018415:17748-17767 | Msa1365860:intron | 30.0% |
| CCAAATATAAGAAAGTTAGG+GGG | + | tig0018415:17862-17881 | None:intergenic | 30.0% | |
| CTATTCGTCAAACTAAATTC+TGG | - | tig0018415:17986-18005 | Msa1365860:intron | 30.0% | |
| !! | AACTAAATTCTGGAGTTAAC+TGG | - | tig0018415:17996-18015 | Msa1365860:intron | 30.0% |
| !!! | TATTTGTGGCATGGTTTTTT+TGG | - | tig0018415:18033-18052 | Msa1365860:intron | 30.0% |
| TGCTTATTGCATTACAACTT+TGG | - | tig0018415:18278-18297 | Msa1365860:intron | 30.0% | |
| !!! | TTTCTGAATGCTTTTTCACT+CGG | - | tig0018415:18333-18352 | Msa1365860:intron | 30.0% |
| CGTGATAGGTATTTATCTTT+AGG | - | tig0018415:18716-18735 | Msa1365860:intron | 30.0% | |
| AAAGAAGCAAACTGAATCTA+CGG | - | tig0018415:18775-18794 | Msa1365860:intron | 30.0% | |
| TGCATGCTTAAAATTTGAAG+GGG | - | tig0018415:18923-18942 | Msa1365860:intron | 30.0% | |
| !! | TATGGCTTTATTTCTTAGAG+TGG | - | tig0018415:19063-19082 | Msa1365860:intron | 30.0% |
| !! | ATGGCTTTATTTCTTAGAGT+GGG | - | tig0018415:19064-19083 | Msa1365860:intron | 30.0% |
| !!! | ATTTTTTCTTTGATGCAGGA+TGG | - | tig0018415:19137-19156 | Msa1365860:intron | 30.0% |
| GCTCTCAACATATTAAAAAG+TGG | + | tig0018415:19177-19196 | None:intergenic | 30.0% | |
| !! | ACTATAAACCAAGTATTGAG+AGG | - | tig0018415:19199-19218 | Msa1365860:intron | 30.0% |
| !! | CTATAAACCAAGTATTGAGA+GGG | - | tig0018415:19200-19219 | Msa1365860:intron | 30.0% |
| !!! | TTTTCATCTTTGTTGTTGGT+AGG | - | tig0018415:19275-19294 | Msa1365860:intron | 30.0% |
| GATGTTTGGAGATATATTCA+AGG | - | tig0018415:19512-19531 | Msa1365860:CDS | 30.0% | |
| ! | TTCTTATTATGCAGTTGATG+GGG | - | tig0018415:19661-19680 | Msa1365860:intron | 30.0% |
| TGAATGTTATCGGCAAAAAA+AGG | - | tig0018415:19947-19966 | Msa1365860:five_prime_UTR | 30.0% | |
| !!! | GTTTTGAGATTGAGATTGAG+AGG | + | tig0018415:13204-13223 | None:intergenic | 35.0% |
| ! | TGCGTGGATTTTGCAAAAAA+GGG | + | tig0018415:13344-13363 | None:intergenic | 35.0% |
| TTGGAGAAAGTTGTGAAAGA+TGG | - | tig0018415:13672-13691 | Msa1365860:CDS | 35.0% | |
| TGTATAAATCCATTAGTGCC+AGG | - | tig0018415:13718-13737 | Msa1365860:CDS | 35.0% | |
| AAGAATGTATTTCCTACCCT+AGG | - | tig0018415:13851-13870 | Msa1365860:intron | 35.0% | |
| AGAATGTATTTCCTACCCTA+GGG | - | tig0018415:13852-13871 | Msa1365860:intron | 35.0% | |
| ! | AGGTTTTTACAATAGACCAG+AGG | + | tig0018415:13986-14005 | None:intergenic | 35.0% |
| ! | TGCTTTGAGCTAAAGGTTAA+AGG | - | tig0018415:14060-14079 | Msa1365860:intron | 35.0% |
| !!! | CTTTTTAACTTATGCCCCAA+GGG | - | tig0018415:14303-14322 | Msa1365860:intron | 35.0% |
| !! | AAATGTTAACTTGTGCCCTT+GGG | + | tig0018415:14321-14340 | None:intergenic | 35.0% |
| AAGAATAGAGCTGTACAGTA+CGG | + | tig0018415:14441-14460 | None:intergenic | 35.0% | |
| ACTATGTACTTGCAGATGAA+AGG | + | tig0018415:14552-14571 | None:intergenic | 35.0% | |
| AAAAAGTTACGAATTTGGGG+TGG | - | tig0018415:14591-14610 | Msa1365860:intron | 35.0% | |
| TTTGGTGAATGCTGAGTTAT+AGG | - | tig0018415:14796-14815 | Msa1365860:intron | 35.0% | |
| AAGTCCTAACATTGTCCATA+AGG | + | tig0018415:14830-14849 | None:intergenic | 35.0% | |
| TATGGACAATGTTAGGACTT+TGG | - | tig0018415:14830-14849 | Msa1365860:intron | 35.0% | |
| !! | AACCGGTTTAGAGTTTTTGA+AGG | - | tig0018415:14867-14886 | Msa1365860:intron | 35.0% |
| TGCCTTCAAAAACTCTAAAC+CGG | + | tig0018415:14872-14891 | None:intergenic | 35.0% | |
| ! | TTTGAAGGCATGAAAAATGC+AGG | - | tig0018415:14882-14901 | Msa1365860:intron | 35.0% |
| ! | TTGAAGGCATGAAAAATGCA+GGG | - | tig0018415:14883-14902 | Msa1365860:intron | 35.0% |
| ! | TGTTATTTGGGGCAAATTCT+AGG | - | tig0018415:14931-14950 | Msa1365860:intron | 35.0% |
| ! | GTTATTTGGGGCAAATTCTA+GGG | - | tig0018415:14932-14951 | Msa1365860:intron | 35.0% |
| AGGTTATATAGATACGGTAG+CGG | + | tig0018415:15237-15256 | None:intergenic | 35.0% | |
| ATCTATATAACCTAGTTCGC+TGG | - | tig0018415:15244-15263 | Msa1365860:intron | 35.0% | |
| ACAGTCACATGCAAAACAAA+TGG | - | tig0018415:15333-15352 | Msa1365860:intron | 35.0% | |
| !! | TACAATTTGACTTGTGGTCT+TGG | + | tig0018415:15535-15554 | None:intergenic | 35.0% |
| AAATTGAAACAGTGCCAAAG+GGG | - | tig0018415:15682-15701 | Msa1365860:intron | 35.0% | |
| ! | GGGTATACCATTAATTTTGG+TGG | - | tig0018415:15900-15919 | Msa1365860:intron | 35.0% |
| AGACCTATGCAATTTATGCA+CGG | - | tig0018415:15966-15985 | Msa1365860:intron | 35.0% | |
| GCATTAGATATCCTACATTC+AGG | - | tig0018415:16132-16151 | Msa1365860:CDS | 35.0% | |
| TTCATTGTTGCCTTATGACT+TGG | - | tig0018415:16274-16293 | Msa1365860:intron | 35.0% | |
| ! | AAGCTATCTGGTACATTTTC+TGG | - | tig0018415:16304-16323 | Msa1365860:intron | 35.0% |
| ! | AGCTATCTGGTACATTTTCT+GGG | - | tig0018415:16305-16324 | Msa1365860:intron | 35.0% |
| ! | TTTTAGCAACCTATGCTTTC+AGG | + | tig0018415:16334-16353 | None:intergenic | 35.0% |
| ! | AGAGCTTGCTTTATTGTTTG+TGG | - | tig0018415:16574-16593 | Msa1365860:CDS | 35.0% |
| ! | AGGAATTTTCCCTTTCACTA+AGG | + | tig0018415:16603-16622 | None:intergenic | 35.0% |
| CCAAGAGTTTCATCATCATA+AGG | + | tig0018415:16623-16642 | None:intergenic | 35.0% | |
| ! | CCTTATGATGATGAAACTCT+TGG | - | tig0018415:16620-16639 | Msa1365860:CDS | 35.0% |
| !! | AAGTGTTCTAAAGTGACCAT+AGG | + | tig0018415:16736-16755 | None:intergenic | 35.0% |
| AATCTATGAAGGATTTCCTC+GGG | - | tig0018415:16953-16972 | Msa1365860:intron | 35.0% | |
| !! | GATAGCAGCTTTTAAGAATG+AGG | + | tig0018415:17069-17088 | None:intergenic | 35.0% |
| ATACAACACTCAACAAACGA+GGG | + | tig0018415:17147-17166 | None:intergenic | 35.0% | |
| ! | TAAGTCTCTTTCAAGTGGTA+TGG | - | tig0018415:17415-17434 | Msa1365860:intron | 35.0% |
| GTACCTCTTAGCAATATTTC+TGG | - | tig0018415:17487-17506 | Msa1365860:intron | 35.0% | |
| AAGCCAGAAATATTGCTAAG+AGG | + | tig0018415:17493-17512 | None:intergenic | 35.0% | |
| ! | GAATTTGGAACAAGTAGTAG+TGG | - | tig0018415:17541-17560 | Msa1365860:intron | 35.0% |
| !! | CATATTTTCTGAAAGTCCTG+AGG | - | tig0018415:17597-17616 | Msa1365860:intron | 35.0% |
| ATTATGAAACATACCACCTC+AGG | + | tig0018415:17616-17635 | None:intergenic | 35.0% | |
| TGAATTCAAGAGAAGCAACA+AGG | + | tig0018415:17658-17677 | None:intergenic | 35.0% | |
| !! | ACTATTGAACTTTTTGGGCA+AGG | - | tig0018415:17832-17851 | Msa1365860:intron | 35.0% |
| CCCCCTAACTTTCTTATATT+TGG | - | tig0018415:17859-17878 | Msa1365860:intron | 35.0% | |
| TTCATTCTGTATTTGTGGCA+TGG | - | tig0018415:18024-18043 | Msa1365860:intron | 35.0% | |
| CAAATATTGCAGTGTTATCC+TGG | - | tig0018415:18077-18096 | Msa1365860:intron | 35.0% | |
| TTATCCTGGTGAAGATGATT+TGG | - | tig0018415:18091-18110 | Msa1365860:intron | 35.0% | |
| AGATCTGCTTTCTCGTAATA+TGG | - | tig0018415:18501-18520 | Msa1365860:intron | 35.0% | |
| GACATCAACCAAAGAAAACA+AGG | + | tig0018415:18632-18651 | None:intergenic | 35.0% | |
| TTCCATGCATATGTCAACAA+AGG | - | tig0018415:18664-18683 | Msa1365860:intron | 35.0% | |
| AACCTTTGTTGACATATGCA+TGG | + | tig0018415:18669-18688 | None:intergenic | 35.0% | |
| GCATGCTTAAAATTTGAAGG+GGG | - | tig0018415:18924-18943 | Msa1365860:intron | 35.0% | |
| TCTGGTAACAGATGAGATTA+AGG | + | tig0018415:18989-19008 | None:intergenic | 35.0% | |
| !! | TCTTATTATGCAGTTGATGG+GGG | - | tig0018415:19662-19681 | Msa1365860:intron | 35.0% |
| ! | CTGCGTGGATTTTGCAAAAA+AGG | + | tig0018415:13345-13364 | None:intergenic | 40.0% |
| GCAGAGAAATTTCATCACCA+TGG | - | tig0018415:13361-13380 | Msa1365860:three_prime_UTR | 40.0% | |
| ! | TCTGGGTATTGTTGTTGTTG+AGG | - | tig0018415:13608-13627 | Msa1365860:intron | 40.0% |
| TTGTTCAAACCTGGCACTAA+TGG | + | tig0018415:13730-13749 | None:intergenic | 40.0% | |
| CTAAAGGTTAAAGGAGTTCG+AGG | - | tig0018415:14069-14088 | Msa1365860:intron | 40.0% | |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | tig0018415:14169-14188 | Msa1365860:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | tig0018415:14170-14189 | Msa1365860:intron | 40.0% |
| CCTTGGGGCATAAGTTAAAA+AGG | + | tig0018415:14305-14324 | None:intergenic | 40.0% | |
| !!! | CCTTTTTAACTTATGCCCCA+AGG | - | tig0018415:14302-14321 | Msa1365860:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTTG+GGG | + | tig0018415:14320-14339 | None:intergenic | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | + | tig0018415:14322-14341 | None:intergenic | 40.0% |
| !! | AAAGGTGCTCTGATAATCCA+TGG | - | tig0018415:14403-14422 | Msa1365860:CDS | 40.0% |
| ! | AAGGTGCTCTGATAATCCAT+GGG | - | tig0018415:14404-14423 | Msa1365860:CDS | 40.0% |
| ACAGTAGTAGATGGTCATGA+CGG | + | tig0018415:15077-15096 | None:intergenic | 40.0% | |
| AGTGGACAGTGAATCGTAAA+GGG | + | tig0018415:15172-15191 | None:intergenic | 40.0% | |
| AAGTGGACAGTGAATCGTAA+AGG | + | tig0018415:15173-15192 | None:intergenic | 40.0% | |
| GGTTATATAGATACGGTAGC+GGG | + | tig0018415:15236-15255 | None:intergenic | 40.0% | |
| GTGAATATTACCAGCGAACT+AGG | + | tig0018415:15257-15276 | None:intergenic | 40.0% | |
| !! | ATGGGGTACAATTTGACTTG+TGG | + | tig0018415:15541-15560 | None:intergenic | 40.0% |
| CTACCGTGCATAAATTGCAT+AGG | + | tig0018415:15972-15991 | None:intergenic | 40.0% | |
| ! | TTCAGGAGCATGCATTCAAT+TGG | - | tig0018415:16149-16168 | Msa1365860:CDS | 40.0% |
| ! | CATGCATTCAATTGGCTCAT+GGG | - | tig0018415:16157-16176 | Msa1365860:CDS | 40.0% |
| ! | TTGTTGCCTTATGACTTGGA+TGG | - | tig0018415:16278-16297 | Msa1365860:intron | 40.0% |
| CTTTGTCCATCCAAGTCATA+AGG | + | tig0018415:16287-16306 | None:intergenic | 40.0% | |
| GTGATCAAGAGAGAAAGGAA+AGG | - | tig0018415:16390-16409 | Msa1365860:intron | 40.0% | |
| ! | AGAGAAAGGAAAGGCACAAA+TGG | - | tig0018415:16399-16418 | Msa1365860:intron | 40.0% |
| TTTGTGGAGACCTTAGTGAA+AGG | - | tig0018415:16590-16609 | Msa1365860:CDS | 40.0% | |
| TTGTGGAGACCTTAGTGAAA+GGG | - | tig0018415:16591-16610 | Msa1365860:CDS | 40.0% | |
| AAGTGCAAAAACACGTGTTG+AGG | - | tig0018415:17037-17056 | Msa1365860:CDS | 40.0% | |
| AGTGCAAAAACACGTGTTGA+GGG | - | tig0018415:17038-17057 | Msa1365860:CDS | 40.0% | |
| CATACAACACTCAACAAACG+AGG | + | tig0018415:17148-17167 | None:intergenic | 40.0% | |
| ! | CTCGTTTGTTGAGTGTTGTA+TGG | - | tig0018415:17146-17165 | Msa1365860:intron | 40.0% |
| GCATACCACTCACTTGTAAA+AGG | + | tig0018415:17443-17462 | None:intergenic | 40.0% | |
| !!! | GCTTTGCTGCTATTTTATCC+AGG | - | tig0018415:17509-17528 | Msa1365860:intron | 40.0% |
| !!! | TTGCTGCTATTTTATCCAGG+TGG | - | tig0018415:17512-17531 | Msa1365860:intron | 40.0% |
| !! | ATTTTCTGAAAGTCCTGAGG+TGG | - | tig0018415:17600-17619 | Msa1365860:intron | 40.0% |
| ! | GTGACGTATCATTTTGTGAG+AGG | - | tig0018415:17782-17801 | Msa1365860:intron | 40.0% |
| !!! | TGTGGCATGGTTTTTTTGGA+AGG | - | tig0018415:18037-18056 | Msa1365860:intron | 40.0% |
| ! | AAGATGATTTGGCCATTGCT+CGG | - | tig0018415:18102-18121 | Msa1365860:intron | 40.0% |
| AATGCTTCCTGTTCAGATCA+TGG | - | tig0018415:18414-18433 | Msa1365860:intron | 40.0% | |
| TTGCATTCCATGATCTGAAC+AGG | + | tig0018415:18424-18443 | None:intergenic | 40.0% | |
| CGCTAAACGGAATTAGTGAA+GGG | + | tig0018415:18549-18568 | None:intergenic | 40.0% | |
| CCTTCACTAATTCCGTTTAG+CGG | - | tig0018415:18547-18566 | Msa1365860:intron | 40.0% | |
| CTTCACTAATTCCGTTTAGC+GGG | - | tig0018415:18548-18567 | Msa1365860:intron | 40.0% | |
| ! | AATTCCGTTTAGCGGGTATA+AGG | - | tig0018415:18555-18574 | Msa1365860:intron | 40.0% |
| ! | ATTCCGTTTAGCGGGTATAA+GGG | - | tig0018415:18556-18575 | Msa1365860:intron | 40.0% |
| ! | GCACTCATCATCTGTTTTCT+GGG | - | tig0018415:18578-18597 | Msa1365860:intron | 40.0% |
| TTGCTCATTTCTTGCGTGAT+AGG | - | tig0018415:18702-18721 | Msa1365860:intron | 40.0% | |
| GAAGGATGCAAACATACTAG+TGG | - | tig0018415:18745-18764 | Msa1365860:intron | 40.0% | |
| AACTGCATCAAGTCTGTCTT+TGG | + | tig0018415:18812-18831 | None:intergenic | 40.0% | |
| TGAAGGGAAGTTCTTGTATC+TGG | + | tig0018415:19007-19026 | None:intergenic | 40.0% | |
| AAGTTAGCTGACCTCATTGA+AGG | + | tig0018415:19232-19251 | None:intergenic | 40.0% | |
| ! | GAGATTGCGCAGAAGTTTTA+TGG | - | tig0018415:19465-19484 | Msa1365860:CDS | 40.0% |
| !! | AGTTTTATGGCGTACAACGA+AGG | - | tig0018415:19478-19497 | Msa1365860:CDS | 40.0% |
| ATATCTCCAAACATCCCCAT+GGG | + | tig0018415:19507-19526 | None:intergenic | 40.0% | |
| TATATCTCCAAACATCCCCA+TGG | + | tig0018415:19508-19527 | None:intergenic | 40.0% | |
| GGTGATGAAATTTCTCTGCG+TGG | + | tig0018415:13360-13379 | None:intergenic | 45.0% | |
| GAAATTTCATCACCATGGCG+CGG | - | tig0018415:13366-13385 | Msa1365860:three_prime_UTR | 45.0% | |
| ! | GGGTGGAAGTTCGAATCTTT+TGG | + | tig0018415:13399-13418 | None:intergenic | 45.0% |
| !! | ATTTTGGGTACCTCATCAGC+GGG | + | tig0018415:13419-13438 | None:intergenic | 45.0% |
| !! | GATTTTGGGTACCTCATCAG+CGG | + | tig0018415:13420-13439 | None:intergenic | 45.0% |
| TTCTCGAAAGAATGAGGGAG+TGG | - | tig0018415:13794-13813 | Msa1365860:intron | 45.0% | |
| ! | GAGTGGTGGCATAGGATTTT+TGG | - | tig0018415:13811-13830 | Msa1365860:intron | 45.0% |
| AAAGGAGGTCATAGTCCCTA+GGG | + | tig0018415:13870-13889 | None:intergenic | 45.0% | |
| AAAAGGAGGTCATAGTCCCT+AGG | + | tig0018415:13871-13890 | None:intergenic | 45.0% | |
| !! | CTAGGAGGGAGCACTATAAA+AGG | + | tig0018415:13888-13907 | None:intergenic | 45.0% |
| AAAACCTGATGCCTGTGCTT+TGG | - | tig0018415:13999-14018 | Msa1365860:CDS | 45.0% | |
| AAACCTGATGCCTGTGCTTT+GGG | - | tig0018415:14000-14019 | Msa1365860:CDS | 45.0% | |
| ! | GCTCAACTGCTTTGAGCTAA+AGG | - | tig0018415:14053-14072 | Msa1365860:intron | 45.0% |
| TTAAAGGAGTTCGAGGTCGT+GGG | - | tig0018415:14076-14095 | Msa1365860:intron | 45.0% | |
| ! | GTGGGTTAAAACTCAGACGA+AGG | - | tig0018415:14094-14113 | Msa1365860:intron | 45.0% |
| !! | CTCCTTAACTTGTGCCCTTA+GGG | + | tig0018415:14187-14206 | None:intergenic | 45.0% |
| TAGAGCTGTACAGTACGGTA+GGG | + | tig0018415:14436-14455 | None:intergenic | 45.0% | |
| ATAGAGCTGTACAGTACGGT+AGG | + | tig0018415:14437-14456 | None:intergenic | 45.0% | |
| !!! | TTTCTGGGTTTTGGAGCGAA+GGG | + | tig0018415:15054-15073 | None:intergenic | 45.0% |
| !! | TCATGACGGTTTCTGGGTTT+TGG | + | tig0018415:15063-15082 | None:intergenic | 45.0% |
| AGATGGTCATGACGGTTTCT+GGG | + | tig0018415:15069-15088 | None:intergenic | 45.0% | |
| TAGATGGTCATGACGGTTTC+TGG | + | tig0018415:15070-15089 | None:intergenic | 45.0% | |
| !! | ATGAATGGTGGGTCTTTGGT+TGG | + | tig0018415:15124-15143 | None:intergenic | 45.0% |
| !! | TTGGATGAATGGTGGGTCTT+TGG | + | tig0018415:15128-15147 | None:intergenic | 45.0% |
| CAGCAGATTGGATGAATGGT+GGG | + | tig0018415:15135-15154 | None:intergenic | 45.0% | |
| ATGGCAGCAGATTGGATGAA+TGG | + | tig0018415:15139-15158 | None:intergenic | 45.0% | |
| AGTGAATCGTAAAGGGGGTA+GGG | + | tig0018415:15165-15184 | None:intergenic | 45.0% | |
| TGGACAGTGAATCGTAAAGG+GGG | + | tig0018415:15170-15189 | None:intergenic | 45.0% | |
| GTGGACAGTGAATCGTAAAG+GGG | + | tig0018415:15171-15190 | None:intergenic | 45.0% | |
| AGAAGATGAAGGGCTTGATG+TGG | - | tig0018415:15614-15633 | Msa1365860:CDS | 45.0% | |
| TATCTTTCCTCTCTCCCCTT+TGG | + | tig0018415:15699-15718 | None:intergenic | 45.0% | |
| CGGTAGAAAGAGCCGTTATT+AGG | - | tig0018415:15986-16005 | Msa1365860:intron | 45.0% | |
| GCAGATATGTAACTGCTCAG+AGG | - | tig0018415:16100-16119 | Msa1365860:intron | 45.0% | |
| GAATGCATGCTCCTGAATGT+AGG | + | tig0018415:16146-16165 | None:intergenic | 45.0% | |
| ! | GCATGCATTCAATTGGCTCA+TGG | - | tig0018415:16156-16175 | Msa1365860:CDS | 45.0% |
| CTTGGATGGACAAAGCTATC+TGG | - | tig0018415:16292-16311 | Msa1365860:intron | 45.0% | |
| ! | GAAAGGAAAGGCACAAATGG+AGG | - | tig0018415:16402-16421 | Msa1365860:intron | 45.0% |
| TTCCATTGCCACAACACCTT+TGG | - | tig0018415:16976-16995 | Msa1365860:intron | 45.0% | |
| TCCATTGCCACAACACCTTT+GGG | - | tig0018415:16977-16996 | Msa1365860:intron | 45.0% | |
| !! | TCAACATCCCAAAGGTGTTG+TGG | + | tig0018415:16987-17006 | None:intergenic | 45.0% |
| GCATGTCATCAACATCCCAA+AGG | + | tig0018415:16995-17014 | None:intergenic | 45.0% | |
| CAGCAGCTTTCAGAAAACCT+TGG | - | tig0018415:17014-17033 | Msa1365860:intron | 45.0% | |
| !! | CACGTGTTTTTGCACTTCCA+AGG | + | tig0018415:17034-17053 | None:intergenic | 45.0% |
| ! | TGGAGCCTTTTACAAGTGAG+TGG | - | tig0018415:17435-17454 | Msa1365860:intron | 45.0% |
| TCCAGAACTGCACATTATGC+TGG | - | tig0018415:17567-17586 | Msa1365860:intron | 45.0% | |
| ATGGCCAAATCATCTTCACC+AGG | + | tig0018415:18098-18117 | None:intergenic | 45.0% | |
| ! | AGATGATTTGGCCATTGCTC+GGG | - | tig0018415:18103-18122 | Msa1365860:intron | 45.0% |
| CCGCTAAACGGAATTAGTGA+AGG | + | tig0018415:18550-18569 | None:intergenic | 45.0% | |
| ! | GGCACTCATCATCTGTTTTC+TGG | - | tig0018415:18577-18596 | Msa1365860:intron | 45.0% |
| CAAGAACTTCCCTTCACTTC+TGG | - | tig0018415:19011-19030 | Msa1365860:intron | 45.0% | |
| CACTTCACACCAGAAGTGAA+GGG | + | tig0018415:19023-19042 | None:intergenic | 45.0% | |
| GAAGGTTCCCTCTCAATACT+TGG | + | tig0018415:19210-19229 | None:intergenic | 45.0% | |
| TAGCTGACCTCATTGAAGGA+AGG | + | tig0018415:19228-19247 | None:intergenic | 45.0% | |
| TATCTCCAAACATCCCCATG+GGG | + | tig0018415:19506-19525 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTATAATCTTATT+TGG | - | tig0018415:16851-16870 | Msa1365860:intron | 5.0% |
| !!! | TAATTACTAATAAATTTTAA+TGG | - | tig0018415:16914-16933 | Msa1365860:intron | 5.0% |
| !!! | TTAATTATTTTAGAAATATA+TGG | - | tig0018415:19045-19064 | Msa1365860:intron | 5.0% |
| TCGAAAGAATGAGGGAGTGG+TGG | - | tig0018415:13797-13816 | Msa1365860:intron | 50.0% | |
| !! | GGAGGGAGCACTATAAAAGG+AGG | + | tig0018415:13885-13904 | None:intergenic | 50.0% |
| ! | TCCCTCCTAGAGCTTTTGGT+GGG | - | tig0018415:13898-13917 | Msa1365860:intron | 50.0% |
| !! | ACCCACCAAAAGCTCTAGGA+GGG | + | tig0018415:13902-13921 | None:intergenic | 50.0% |
| !! | TTTTGGTGGGTGCCTTCATG+TGG | - | tig0018415:13911-13930 | Msa1365860:intron | 50.0% |
| ! | TTTGGTGGGTGCCTTCATGT+GGG | - | tig0018415:13912-13931 | Msa1365860:intron | 50.0% |
| AACCTGATGCCTGTGCTTTG+GGG | - | tig0018415:14001-14020 | Msa1365860:CDS | 50.0% | |
| GGGAGATCCCACGATACTAT+GGG | - | tig0018415:14021-14040 | Msa1365860:CDS | 50.0% | |
| GGAGATCCCACGATACTATG+GGG | - | tig0018415:14022-14041 | Msa1365860:CDS | 50.0% | |
| GAGATCCCACGATACTATGG+GGG | - | tig0018415:14023-14042 | Msa1365860:CDS | 50.0% | |
| GTTAAAGGAGTTCGAGGTCG+TGG | - | tig0018415:14075-14094 | Msa1365860:intron | 50.0% | |
| ! | TGCCCTAAGGGCACAAGTTA+AGG | - | tig0018415:14182-14201 | Msa1365860:intron | 50.0% |
| !! | GCTCCTTAACTTGTGCCCTT+AGG | + | tig0018415:14188-14207 | None:intergenic | 50.0% |
| GGGGCTGTGTACAGTATTGT+GGG | + | tig0018415:14361-14380 | None:intergenic | 50.0% | |
| ! | ATCAGAGCACCTTTGCCCTT+CGG | + | tig0018415:14397-14416 | None:intergenic | 50.0% |
| !! | GGCAAATTCTAGGGTGCACA+AGG | - | tig0018415:14941-14960 | Msa1365860:intron | 50.0% |
| ! | CTAGGGTGCACAAGGTGTTT+AGG | - | tig0018415:14949-14968 | Msa1365860:intron | 50.0% |
| !!! | TTCTGGGTTTTGGAGCGAAG+GGG | + | tig0018415:15053-15072 | None:intergenic | 50.0% |
| !!! | GTTTCTGGGTTTTGGAGCGA+AGG | + | tig0018415:15055-15074 | None:intergenic | 50.0% |
| GGTTCTGCGACAGTAGTAGA+TGG | + | tig0018415:15086-15105 | None:intergenic | 50.0% | |
| !! | AATGGTGGGTCTTTGGTTGG+AGG | + | tig0018415:15121-15140 | None:intergenic | 50.0% |
| GCAGCAGATTGGATGAATGG+TGG | + | tig0018415:15136-15155 | None:intergenic | 50.0% | |
| GTGAATCGTAAAGGGGGTAG+GGG | + | tig0018415:15164-15183 | None:intergenic | 50.0% | |
| CAGTGAATCGTAAAGGGGGT+AGG | + | tig0018415:15166-15185 | None:intergenic | 50.0% | |
| AGATGAAGGGCTTGATGTGG+AGG | - | tig0018415:15617-15636 | Msa1365860:CDS | 50.0% | |
| ! | CATTCAATTGGCTCATGGGC+AGG | - | tig0018415:16161-16180 | Msa1365860:CDS | 50.0% |
| ! | TCTGGGACACCTGAAAGCAT+AGG | - | tig0018415:16322-16341 | Msa1365860:intron | 50.0% |
| TAAAGCAAGCTCTGCTCCAC+AGG | + | tig0018415:16567-16586 | None:intergenic | 50.0% | |
| !! | TCCCAAAGGTGTTGTGGCAA+TGG | + | tig0018415:16981-17000 | None:intergenic | 50.0% |
| TCCAGGTGGTCTGCTGAATT+TGG | - | tig0018415:17526-17545 | Msa1365860:intron | 50.0% | |
| TCCAAATTCAGCAGACCACC+TGG | + | tig0018415:17530-17549 | None:intergenic | 50.0% | |
| GCCAGCATAATGTGCAGTTC+TGG | + | tig0018415:17571-17590 | None:intergenic | 50.0% | |
| CCTTAAAACAGCCCGAGCAA+TGG | + | tig0018415:18117-18136 | None:intergenic | 50.0% | |
| !! | CCATTGCTCGGGCTGTTTTA+AGG | - | tig0018415:18114-18133 | Msa1365860:intron | 50.0% |
| GTGCCCTTATACCCGCTAAA+CGG | + | tig0018415:18562-18581 | None:intergenic | 50.0% | |
| GCACTTCACACCAGAAGTGA+AGG | + | tig0018415:19024-19043 | None:intergenic | 50.0% | |
| GAGGGAACCTTCCTTCAATG+AGG | - | tig0018415:19218-19237 | Msa1365860:intron | 50.0% | |
| GTACAACGAAGGAACCCCAT+GGG | - | tig0018415:19489-19508 | Msa1365860:CDS | 50.0% | |
| TACAACGAAGGAACCCCATG+GGG | - | tig0018415:19490-19509 | Msa1365860:CDS | 50.0% | |
| GAATGAGGGAGTGGTGGCAT+AGG | - | tig0018415:13803-13822 | Msa1365860:intron | 55.0% | |
| GAGGTCATAGTCCCTAGGGT+AGG | + | tig0018415:13866-13885 | None:intergenic | 55.0% | |
| ! | GTGCTCCCTCCTAGAGCTTT+TGG | - | tig0018415:13894-13913 | Msa1365860:intron | 55.0% |
| ! | CTCCCTCCTAGAGCTTTTGG+TGG | - | tig0018415:13897-13916 | Msa1365860:intron | 55.0% |
| !! | CACCCACCAAAAGCTCTAGG+AGG | + | tig0018415:13903-13922 | None:intergenic | 55.0% |
| AGGCACCCACCAAAAGCTCT+AGG | + | tig0018415:13906-13925 | None:intergenic | 55.0% | |
| CCTTCATGTGGGCAGACATC+CGG | - | tig0018415:13923-13942 | Msa1365860:intron | 55.0% | |
| CTTACCGAGCGAGCACATCA+CGG | + | tig0018415:13953-13972 | None:intergenic | 55.0% | |
| TGCTCGCTCGGTAAGCACTT+GGG | - | tig0018415:13958-13977 | Msa1365860:intron | 55.0% | |
| GGGGAGATCCCACGATACTA+TGG | - | tig0018415:14020-14039 | Msa1365860:CDS | 55.0% | |
| TCCCACGATACTATGGGGGT+TGG | - | tig0018415:14027-14046 | Msa1365860:CDS | 55.0% | |
| CCCAACCCCCATAGTATCGT+GGG | + | tig0018415:14031-14050 | None:intergenic | 55.0% | |
| CCCACGATACTATGGGGGTT+GGG | - | tig0018415:14028-14047 | Msa1365860:intron | 55.0% | |
| ACCCAACCCCCATAGTATCG+TGG | + | tig0018415:14032-14051 | None:intergenic | 55.0% | |
| GGGGGCTGTGTACAGTATTG+TGG | + | tig0018415:14362-14381 | None:intergenic | 55.0% | |
| TACGGTAGGGTCAGTACCCA+TGG | + | tig0018415:14423-14442 | None:intergenic | 55.0% | |
| GGTGGTCACTCAGAGTCAGA+AGG | - | tig0018415:14650-14669 | Msa1365860:intron | 55.0% | |
| ! | GGTTGGAGGTGTAGTAGCTC+TGG | + | tig0018415:15107-15126 | None:intergenic | 55.0% |
| ! | TAGGGGTGATGGCAGCAGAT+TGG | + | tig0018415:15147-15166 | None:intergenic | 55.0% |
| TGAAGGGCTTGATGTGGAGG+TGG | - | tig0018415:15620-15639 | Msa1365860:CDS | 55.0% | |
| CTTGATGTGGAGGTGGAGGA+AGG | - | tig0018415:15627-15646 | Msa1365860:CDS | 55.0% | |
| GTGGAGGTGGAGGAAGGAAA+CGG | - | tig0018415:15633-15652 | Msa1365860:CDS | 55.0% | |
| AACAGTGCCAAAGGGGAGAG+AGG | - | tig0018415:15689-15708 | Msa1365860:intron | 55.0% | |
| TGTTGTGGCAATGGAACCCG+AGG | + | tig0018415:16972-16991 | None:intergenic | 55.0% | |
| CGTACAACGAAGGAACCCCA+TGG | - | tig0018415:19488-19507 | Msa1365860:CDS | 55.0% | |
| AGGAACCCCATGGGGATGTT+TGG | - | tig0018415:19498-19517 | Msa1365860:CDS | 55.0% | |
| TTTGGATCTCTGCCGCGCCA+TGG | + | tig0018415:13381-13400 | None:intergenic | 60.0% | |
| CGAACTTCCACCCGCTGATG+AGG | - | tig0018415:13406-13425 | Msa1365860:three_prime_UTR | 60.0% | |
| TTGGGTACCTCATCAGCGGG+TGG | + | tig0018415:13416-13435 | None:intergenic | 60.0% | |
| CCGGATGTCTGCCCACATGA+AGG | + | tig0018415:13926-13945 | None:intergenic | 60.0% | |
| TCATGTGGGCAGACATCCGG+TGG | - | tig0018415:13926-13945 | Msa1365860:intron | 60.0% | |
| CATGTGGGCAGACATCCGGT+GGG | - | tig0018415:13927-13946 | Msa1365860:intron | 60.0% | |
| GTGCTCGCTCGGTAAGCACT+TGG | - | tig0018415:13957-13976 | Msa1365860:intron | 60.0% | |
| GGTAAGCACTTGGGCTCCTC+TGG | - | tig0018415:13967-13986 | Msa1365860:CDS | 60.0% | |
| CTCCCCAAAGCACAGGCATC+AGG | + | tig0018415:14006-14025 | None:intergenic | 60.0% | |
| GTGGGATCTCCCCAAAGCAC+AGG | + | tig0018415:14013-14032 | None:intergenic | 60.0% | |
| CGTAAAGGGGGTAGGGGTGA+TGG | + | tig0018415:15158-15177 | None:intergenic | 60.0% | |
| AGGGCTTGATGTGGAGGTGG+AGG | - | tig0018415:15623-15642 | Msa1365860:CDS | 60.0% | |
| GAGGTGGAGGAAGGAAACGG+CGG | - | tig0018415:15636-15655 | Msa1365860:CDS | 60.0% | |
| TGGGCCGTGATGTGCTCGCT+CGG | - | tig0018415:13946-13965 | Msa1365860:intron | 65.0% | |
| ACACAGCCCCCCAAGCGTCA+AGG | - | tig0018415:14371-14390 | Msa1365860:CDS | 65.0% | |
| CTTCGGCCTTGACGCTTGGG+GGG | + | tig0018415:14380-14399 | None:intergenic | 65.0% | |
| CCTTCGGCCTTGACGCTTGG+GGG | + | tig0018415:14381-14400 | None:intergenic | 65.0% | |
| CCCTTCGGCCTTGACGCTTG+GGG | + | tig0018415:14382-14401 | None:intergenic | 65.0% | |
| CCCCAAGCGTCAAGGCCGAA+GGG | - | tig0018415:14379-14398 | Msa1365860:CDS | 65.0% | |
| GCCCTTCGGCCTTGACGCTT+GGG | + | tig0018415:14383-14402 | None:intergenic | 65.0% | |
| TGCCCTTCGGCCTTGACGCT+TGG | + | tig0018415:14384-14403 | None:intergenic | 65.0% | |
| GCGTCAAGGCCGAAGGGCAA+AGG | - | tig0018415:14385-14404 | Msa1365860:CDS | 65.0% | |
| GCGAGCACATCACGGCCCAC+CGG | + | tig0018415:13945-13964 | None:intergenic | 70.0% | |
| CCCCCAAGCGTCAAGGCCGA+AGG | - | tig0018415:14378-14397 | Msa1365860:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018415 | gene | 13195 | 20006 | 13195 | ID=Msa1365860;Name=Msa1365860 |
| tig0018415 | mRNA | 13195 | 20006 | 13195 | ID=Msa1365860-mRNA-1;Parent=Msa1365860;Name=Msa1365860-mRNA-1;_AED=0.07;_eAED=0.07;_QI=185|1|1|1|1|1|12|314|323 |
| tig0018415 | exon | 13195 | 13526 | 13195 | ID=Msa1365860-mRNA-1:exon:14877;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 13668 | 13745 | 13668 | ID=Msa1365860-mRNA-1:exon:14876;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 13962 | 14046 | 13962 | ID=Msa1365860-mRNA-1:exon:14875;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 14349 | 14477 | 14349 | ID=Msa1365860-mRNA-1:exon:14874;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 15066 | 15112 | 15066 | ID=Msa1365860-mRNA-1:exon:14873;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 15348 | 15431 | 15348 | ID=Msa1365860-mRNA-1:exon:14872;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 15580 | 15670 | 15580 | ID=Msa1365860-mRNA-1:exon:14871;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 16111 | 16261 | 16111 | ID=Msa1365860-mRNA-1:exon:14870;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 16560 | 16641 | 16560 | ID=Msa1365860-mRNA-1:exon:14869;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 17019 | 17097 | 17019 | ID=Msa1365860-mRNA-1:exon:14868;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 19462 | 19541 | 19462 | ID=Msa1365860-mRNA-1:exon:14867;Parent=Msa1365860-mRNA-1 |
| tig0018415 | exon | 19774 | 20006 | 19774 | ID=Msa1365860-mRNA-1:exon:14866;Parent=Msa1365860-mRNA-1 |
| tig0018415 | five_prime_UTR | 19822 | 20006 | 19822 | ID=Msa1365860-mRNA-1:five_prime_utr;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 19774 | 19821 | 19774 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 19462 | 19541 | 19462 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 17019 | 17097 | 17019 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 16560 | 16641 | 16560 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 16111 | 16261 | 16111 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 15580 | 15670 | 15580 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 15348 | 15431 | 15348 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 15066 | 15112 | 15066 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 14349 | 14477 | 14349 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 13962 | 14046 | 13962 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 13668 | 13745 | 13668 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | CDS | 13509 | 13526 | 13509 | ID=Msa1365860-mRNA-1:cds;Parent=Msa1365860-mRNA-1 |
| tig0018415 | three_prime_UTR | 13195 | 13508 | 13195 | ID=Msa1365860-mRNA-1:three_prime_utr;Parent=Msa1365860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
