Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168750 | sp|Q94AX3|LTG16_ARATH | 46.203 | 158 | 73 | 4 | 27 | 182 | 22 | 169 | 7.31e-35 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168750 | G7IDM6 | 95.789 | 190 | 8 | 0 | 1 | 190 | 1 | 190 | 1.73e-127 | 365 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa0168750 | 0.805568 | 1.253700e-49 | -8.615850e-47 |
| Msa0011040 | Msa0168750 | 0.800705 | 1.271191e-48 | -8.615850e-47 |
| Msa0013270 | Msa0168750 | 0.831885 | 1.295400e-55 | -8.615850e-47 |
| Msa0015950 | Msa0168750 | 0.829770 | 4.274454e-55 | -8.615850e-47 |
| Msa0015960 | Msa0168750 | 0.820853 | 5.507353e-53 | -8.615850e-47 |
| Msa0016070 | Msa0168750 | 0.834858 | 2.349985e-56 | -8.615850e-47 |
| Msa0016080 | Msa0168750 | 0.847379 | 1.200222e-59 | -8.615850e-47 |
| Msa0017710 | Msa0168750 | 0.803940 | 2.742961e-49 | -8.615850e-47 |
| Msa0024650 | Msa0168750 | 0.818425 | 1.973423e-52 | -8.615850e-47 |
| Msa0025560 | Msa0168750 | 0.822514 | 2.274670e-53 | -8.615850e-47 |
| Msa0025570 | Msa0168750 | 0.822683 | 2.077562e-53 | -8.615850e-47 |
| Msa0028690 | Msa0168750 | 0.968757 | 3.923234e-129 | -8.615850e-47 |
| Msa0041630 | Msa0168750 | 0.827897 | 1.214001e-54 | -8.615850e-47 |
| Msa0045810 | Msa0168750 | 0.827618 | 1.416485e-54 | -8.615850e-47 |
| Msa0046200 | Msa0168750 | 0.812260 | 4.636810e-51 | -8.615850e-47 |
| Msa0048380 | Msa0168750 | 0.803265 | 3.786642e-49 | -8.615850e-47 |
| Msa0060410 | Msa0168750 | 0.859367 | 4.342780e-63 | -8.615850e-47 |
| Msa0062190 | Msa0168750 | 0.843063 | 1.764234e-58 | -8.615850e-47 |
| Msa0072180 | Msa0168750 | 0.840662 | 7.595159e-58 | -8.615850e-47 |
| Msa0073110 | Msa0168750 | 0.820104 | 8.182570e-53 | -8.615850e-47 |
| Msa0076350 | Msa0168750 | 0.846029 | 2.807049e-59 | -8.615850e-47 |
| Msa0089190 | Msa0168750 | 0.841119 | 5.764232e-58 | -8.615850e-47 |
| Msa0097010 | Msa0168750 | 0.802752 | 4.833441e-49 | -8.615850e-47 |
| Msa0106540 | Msa0168750 | 0.829810 | 4.178716e-55 | -8.615850e-47 |
| Msa0119240 | Msa0168750 | 0.910303 | 2.179240e-82 | -8.615850e-47 |
| Msa0120450 | Msa0168750 | 0.802654 | 5.062353e-49 | -8.615850e-47 |
| Msa0121300 | Msa0168750 | 0.814640 | 1.389962e-51 | -8.615850e-47 |
| Msa0121320 | Msa0168750 | 0.801862 | 7.371263e-49 | -8.615850e-47 |
| Msa0136000 | Msa0168750 | 0.847112 | 1.421207e-59 | -8.615850e-47 |
| Msa0136180 | Msa0168750 | -0.820958 | 5.210415e-53 | -8.615850e-47 |
| Msa0161230 | Msa0168750 | 0.806161 | 9.408909e-50 | -8.615850e-47 |
| Msa0163690 | Msa0168750 | 0.819797 | 9.616794e-53 | -8.615850e-47 |
| Msa0166190 | Msa0168750 | 0.821591 | 3.722148e-53 | -8.615850e-47 |
| Msa0168750 | Msa0189680 | 0.803624 | 3.189372e-49 | -8.615850e-47 |
| Msa0168750 | Msa0189990 | 0.917778 | 3.504195e-86 | -8.615850e-47 |
| Msa0168750 | Msa0193680 | 0.806510 | 7.943636e-50 | -8.615850e-47 |
| Msa0168750 | Msa0193950 | 0.804478 | 2.118843e-49 | -8.615850e-47 |
| Msa0168750 | Msa0205050 | 0.808044 | 3.758189e-50 | -8.615850e-47 |
| Msa0168750 | Msa0206370 | 0.801275 | 9.722189e-49 | -8.615850e-47 |
| Msa0168750 | Msa0210610 | 0.809749 | 1.622705e-50 | -8.615850e-47 |
| Msa0168750 | Msa0216150 | -0.801362 | 9.333899e-49 | -8.615850e-47 |
| Msa0168750 | Msa0217060 | 0.800362 | 1.493604e-48 | -8.615850e-47 |
| Msa0168750 | Msa0218500 | 0.821200 | 4.582819e-53 | -8.615850e-47 |
| Msa0168750 | Msa0218610 | 0.806548 | 7.799744e-50 | -8.615850e-47 |
| Msa0168750 | Msa0224870 | 0.811106 | 8.262453e-51 | -8.615850e-47 |
| Msa0168750 | Msa0232060 | 0.809091 | 2.245364e-50 | -8.615850e-47 |
| Msa0168750 | Msa0234150 | 0.817713 | 2.858830e-52 | -8.615850e-47 |
| Msa0168750 | Msa0247780 | 0.854245 | 1.399696e-61 | -8.615850e-47 |
| Msa0168750 | Msa0248320 | 0.802762 | 4.810777e-49 | -8.615850e-47 |
| Msa0168750 | Msa0256920 | 0.802632 | 5.116203e-49 | -8.615850e-47 |
| Msa0168750 | Msa0258260 | 0.814284 | 1.665956e-51 | -8.615850e-47 |
| Msa0168750 | Msa0274570 | 0.800258 | 1.568218e-48 | -8.615850e-47 |
| Msa0168750 | Msa0278920 | 0.800915 | 1.152106e-48 | -8.615850e-47 |
| Msa0168750 | Msa0279810 | 0.809867 | 1.530327e-50 | -8.615850e-47 |
| Msa0168750 | Msa0286360 | 0.846075 | 2.728064e-59 | -8.615850e-47 |
| Msa0168750 | Msa0287480 | 0.824594 | 7.417175e-54 | -8.615850e-47 |
| Msa0168750 | Msa0289960 | 0.806321 | 8.707395e-50 | -8.615850e-47 |
| Msa0168750 | Msa0297340 | 0.837544 | 4.882540e-57 | -8.615850e-47 |
| Msa0168750 | Msa0303900 | 0.802311 | 5.958618e-49 | -8.615850e-47 |
| Msa0168750 | Msa0307630 | 0.835162 | 1.970475e-56 | -8.615850e-47 |
| Msa0168750 | Msa0307740 | 0.911662 | 4.720223e-83 | -8.615850e-47 |
| Msa0168750 | Msa0318490 | 0.847212 | 1.334001e-59 | -8.615850e-47 |
| Msa0168750 | Msa0319220 | 0.805598 | 1.235686e-49 | -8.615850e-47 |
| Msa0168750 | Msa0325260 | 0.852522 | 4.369938e-61 | -8.615850e-47 |
| Msa0168750 | Msa0333770 | 0.828305 | 9.679928e-55 | -8.615850e-47 |
| Msa0168750 | Msa0356240 | 0.810007 | 1.427446e-50 | -8.615850e-47 |
| Msa0168750 | Msa0356270 | 0.837853 | 4.068890e-57 | -8.615850e-47 |
| Msa0168750 | Msa0357510 | 0.808279 | 3.348843e-50 | -8.615850e-47 |
| Msa0168750 | Msa0364030 | -0.809200 | 2.128386e-50 | -8.615850e-47 |
| Msa0168750 | Msa0364900 | 0.838864 | 2.232114e-57 | -8.615850e-47 |
| Msa0168750 | Msa0364910 | -0.802872 | 4.564098e-49 | -8.615850e-47 |
| Msa0168750 | Msa0375790 | 0.815128 | 1.083233e-51 | -8.615850e-47 |
| Msa0168750 | Msa0380110 | 0.814114 | 1.817084e-51 | -8.615850e-47 |
| Msa0168750 | Msa0403740 | -0.808950 | 2.407404e-50 | -8.615850e-47 |
| Msa0168750 | Msa0412560 | 0.834696 | 2.580907e-56 | -8.615850e-47 |
| Msa0168750 | Msa0412580 | -0.817338 | 3.472531e-52 | -8.615850e-47 |
| Msa0168750 | Msa0418230 | 0.867937 | 9.468182e-66 | -8.615850e-47 |
| Msa0168750 | Msa0437440 | -0.808551 | 2.929927e-50 | -8.615850e-47 |
| Msa0168750 | Msa0448950 | 0.802917 | 4.468229e-49 | -8.615850e-47 |
| Msa0168750 | Msa0456450 | -0.805254 | 1.459026e-49 | -8.615850e-47 |
| Msa0168750 | Msa0457060 | 0.829756 | 4.307176e-55 | -8.615850e-47 |
| Msa0168750 | Msa0457070 | -0.808378 | 3.189056e-50 | -8.615850e-47 |
| Msa0168750 | Msa0464620 | 0.873492 | 1.409820e-67 | -8.615850e-47 |
| Msa0168750 | Msa0480900 | -0.804154 | 2.475286e-49 | -8.615850e-47 |
| Msa0168750 | Msa0481670 | 0.801476 | 8.842163e-49 | -8.615850e-47 |
| Msa0168750 | Msa0490100 | 0.823246 | 1.535472e-53 | -8.615850e-47 |
| Msa0168750 | Msa0491780 | 0.800919 | 1.149929e-48 | -8.615850e-47 |
| Msa0168750 | Msa0501080 | 0.836729 | 7.888164e-57 | -8.615850e-47 |
| Msa0168750 | Msa0504350 | 0.816830 | 4.517434e-52 | -8.615850e-47 |
| Msa0168750 | Msa0510050 | 0.853753 | 1.940178e-61 | -8.615850e-47 |
| Msa0168750 | Msa0521550 | 0.801689 | 7.997017e-49 | -8.615850e-47 |
| Msa0168750 | Msa0525180 | -0.806427 | 8.270487e-50 | -8.615850e-47 |
| Msa0168750 | Msa0531050 | 0.814015 | 1.910371e-51 | -8.615850e-47 |
| Msa0168750 | Msa0540640 | 0.813414 | 2.590821e-51 | -8.615850e-47 |
| Msa0168750 | Msa0546590 | 0.814355 | 1.607302e-51 | -8.615850e-47 |
| Msa0168750 | Msa0547370 | 0.804728 | 1.879435e-49 | -8.615850e-47 |
| Msa0168750 | Msa0557240 | 0.816785 | 4.622732e-52 | -8.615850e-47 |
| Msa0168750 | Msa0557250 | 0.803654 | 3.145036e-49 | -8.615850e-47 |
| Msa0168750 | Msa0560060 | 0.849455 | 3.198854e-60 | -8.615850e-47 |
| Msa0168750 | Msa0565700 | 0.840473 | 8.512068e-58 | -8.615850e-47 |
| Msa0168750 | Msa0566280 | 0.831521 | 1.592268e-55 | -8.615850e-47 |
| Msa0168750 | Msa0566490 | 0.841218 | 5.430176e-58 | -8.615850e-47 |
| Msa0168750 | Msa0567330 | 0.858132 | 1.016166e-62 | -8.615850e-47 |
| Msa0168750 | Msa0567570 | 0.848239 | 6.957016e-60 | -8.615850e-47 |
| Msa0168750 | Msa0576320 | 0.852253 | 5.210213e-61 | -8.615850e-47 |
| Msa0168750 | Msa0580410 | -0.807274 | 5.474835e-50 | -8.615850e-47 |
| Msa0168750 | Msa0580890 | -0.801516 | 8.680532e-49 | -8.615850e-47 |
| Msa0168750 | Msa0588040 | 0.827371 | 1.623301e-54 | -8.615850e-47 |
| Msa0168750 | Msa0590620 | -0.816212 | 6.211248e-52 | -8.615850e-47 |
| Msa0168750 | Msa0598310 | 0.817834 | 2.684112e-52 | -8.615850e-47 |
| Msa0168750 | Msa0606600 | 0.813927 | 1.997332e-51 | -8.615850e-47 |
| Msa0168750 | Msa0618680 | 0.804252 | 2.362171e-49 | -8.615850e-47 |
| Msa0168750 | Msa0618700 | 0.820296 | 7.392052e-53 | -8.615850e-47 |
| Msa0168750 | Msa0628200 | 0.810866 | 9.315687e-51 | -8.615850e-47 |
| Msa0168750 | Msa0636540 | 0.819230 | 1.295219e-52 | -8.615850e-47 |
| Msa0168750 | Msa0643230 | 0.817195 | 3.740795e-52 | -8.615850e-47 |
| Msa0168750 | Msa0644330 | 0.823765 | 1.161612e-53 | -8.615850e-47 |
| Msa0168750 | Msa0647300 | 0.841451 | 4.713912e-58 | -8.615850e-47 |
| Msa0168750 | Msa0657710 | 0.823594 | 1.273792e-53 | -8.615850e-47 |
| Msa0168750 | Msa0658150 | 0.888067 | 8.202466e-73 | -8.615850e-47 |
| Msa0168750 | Msa0661410 | 0.825351 | 4.914016e-54 | -8.615850e-47 |
| Msa0168750 | Msa0661420 | 0.819537 | 1.102495e-52 | -8.615850e-47 |
| Msa0168750 | Msa0676570 | -0.807168 | 5.766467e-50 | -8.615850e-47 |
| Msa0168750 | Msa0677130 | 0.809685 | 1.674601e-50 | -8.615850e-47 |
| Msa0168750 | Msa0680460 | 0.800613 | 1.327468e-48 | -8.615850e-47 |
| Msa0168750 | Msa0682110 | 0.840022 | 1.116357e-57 | -8.615850e-47 |
| Msa0168750 | Msa0682160 | 0.826989 | 2.003522e-54 | -8.615850e-47 |
| Msa0168750 | Msa0686830 | 0.844301 | 8.229356e-59 | -8.615850e-47 |
| Msa0168750 | Msa0699170 | 0.806496 | 7.998996e-50 | -8.615850e-47 |
| Msa0168750 | Msa0701660 | 0.823194 | 1.579048e-53 | -8.615850e-47 |
| Msa0168750 | Msa0702800 | 0.825307 | 5.033978e-54 | -8.615850e-47 |
| Msa0168750 | Msa0703000 | 0.887024 | 2.050818e-72 | -8.615850e-47 |
| Msa0168750 | Msa0707330 | 0.823044 | 1.711539e-53 | -8.615850e-47 |
| Msa0168750 | Msa0713400 | 0.800999 | 1.107126e-48 | -8.615850e-47 |
| Msa0168750 | Msa0722890 | 0.803660 | 3.135065e-49 | -8.615850e-47 |
| Msa0168750 | Msa0723090 | 0.810552 | 1.088894e-50 | -8.615850e-47 |
| Msa0168750 | Msa0724860 | 0.850820 | 1.326384e-60 | -8.615850e-47 |
| Msa0168750 | Msa0730890 | 0.806675 | 7.331624e-50 | -8.615850e-47 |
| Msa0168750 | Msa0736920 | 0.804430 | 2.168053e-49 | -8.615850e-47 |
| Msa0168750 | Msa0742370 | -0.811560 | 6.587095e-51 | -8.615850e-47 |
| Msa0168750 | Msa0755470 | 0.812067 | 5.107167e-51 | -8.615850e-47 |
| Msa0168750 | Msa0755880 | 0.813364 | 2.657515e-51 | -8.615850e-47 |
| Msa0168750 | Msa0769540 | 0.860147 | 2.529528e-63 | -8.615850e-47 |
| Msa0168750 | Msa0773030 | 0.905197 | 5.536910e-80 | -8.615850e-47 |
| Msa0168750 | Msa0775350 | 0.803655 | 3.142920e-49 | -8.615850e-47 |
| Msa0168750 | Msa0778570 | 0.803745 | 3.011138e-49 | -8.615850e-47 |
| Msa0168750 | Msa0792410 | 0.834330 | 3.191169e-56 | -8.615850e-47 |
| Msa0168750 | Msa0794090 | 0.812706 | 3.703627e-51 | -8.615850e-47 |
| Msa0168750 | Msa0794100 | 0.827894 | 1.215502e-54 | -8.615850e-47 |
| Msa0168750 | Msa0795910 | -0.806674 | 7.335087e-50 | -8.615850e-47 |
| Msa0168750 | Msa0800120 | 0.817184 | 3.762001e-52 | -8.615850e-47 |
| Msa0168750 | Msa0800150 | 0.817225 | 3.682161e-52 | -8.615850e-47 |
| Msa0168750 | Msa0810330 | 0.913434 | 6.182184e-84 | -8.615850e-47 |
| Msa0168750 | Msa0812720 | 0.863970 | 1.702063e-64 | -8.615850e-47 |
| Msa0168750 | Msa0823480 | -0.815017 | 1.146659e-51 | -8.615850e-47 |
| Msa0168750 | Msa0828960 | 0.820337 | 7.233560e-53 | -8.615850e-47 |
| Msa0168750 | Msa0831310 | 0.832544 | 8.900148e-56 | -8.615850e-47 |
| Msa0168750 | Msa0831320 | 0.800928 | 1.145137e-48 | -8.615850e-47 |
| Msa0168750 | Msa0833360 | -0.801937 | 7.114327e-49 | -8.615850e-47 |
| Msa0168750 | Msa0838210 | 0.814076 | 1.852448e-51 | -8.615850e-47 |
| Msa0168750 | Msa0850640 | 0.897876 | 9.187176e-77 | -8.615850e-47 |
| Msa0168750 | Msa0853080 | 0.809657 | 1.698036e-50 | -8.615850e-47 |
| Msa0168750 | Msa0862480 | -0.809560 | 1.781251e-50 | -8.615850e-47 |
| Msa0168750 | Msa0880910 | 0.807878 | 4.076806e-50 | -8.615850e-47 |
| Msa0168750 | Msa0907880 | 0.900610 | 6.166322e-78 | -8.615850e-47 |
| Msa0168750 | Msa0909260 | 0.815732 | 7.949410e-52 | -8.615850e-47 |
| Msa0168750 | Msa0964400 | -0.806221 | 9.140301e-50 | -8.615850e-47 |
| Msa0168750 | Msa0967780 | 0.813037 | 3.135298e-51 | -8.615850e-47 |
| Msa0168750 | Msa1015360 | 0.825978 | 3.490042e-54 | -8.615850e-47 |
| Msa0168750 | Msa1019420 | 0.808242 | 3.410726e-50 | -8.615850e-47 |
| Msa0168750 | Msa1024480 | 0.809546 | 1.793373e-50 | -8.615850e-47 |
| Msa0168750 | Msa1029820 | 0.813482 | 2.503725e-51 | -8.615850e-47 |
| Msa0168750 | Msa1029860 | 0.844703 | 6.413206e-59 | -8.615850e-47 |
| Msa0168750 | Msa1035050 | 0.806941 | 6.442439e-50 | -8.615850e-47 |
| Msa0168750 | Msa1042300 | 0.801575 | 8.438700e-49 | -8.615850e-47 |
| Msa0168750 | Msa1044250 | 0.816334 | 5.835477e-52 | -8.615850e-47 |
| Msa0168750 | Msa1056890 | 0.801242 | 9.873817e-49 | -8.615850e-47 |
| Msa0168750 | Msa1068780 | 0.809486 | 1.848087e-50 | -8.615850e-47 |
| Msa0168750 | Msa1068940 | 0.804640 | 1.960253e-49 | -8.615850e-47 |
| Msa0168750 | Msa1075090 | 0.813455 | 2.537448e-51 | -8.615850e-47 |
| Msa0168750 | Msa1087210 | 0.845771 | 3.299718e-59 | -8.615850e-47 |
| Msa0168750 | Msa1092310 | 0.815242 | 1.021827e-51 | -8.615850e-47 |
| Msa0168750 | Msa1094810 | 0.814432 | 1.545307e-51 | -8.615850e-47 |
| Msa0168750 | Msa1103450 | 0.815087 | 1.106131e-51 | -8.615850e-47 |
| Msa0168750 | Msa1107220 | 0.800876 | 1.173306e-48 | -8.615850e-47 |
| Msa0168750 | Msa1108560 | 0.812463 | 4.186203e-51 | -8.615850e-47 |
| Msa0168750 | Msa1124220 | 0.802707 | 4.936569e-49 | -8.615850e-47 |
| Msa0168750 | Msa1131270 | 0.826751 | 2.284257e-54 | -8.615850e-47 |
| Msa0168750 | Msa1132880 | -0.809141 | 2.190969e-50 | -8.615850e-47 |
| Msa0168750 | Msa1147010 | 0.803545 | 3.313054e-49 | -8.615850e-47 |
| Msa0168750 | Msa1149910 | 0.804946 | 1.692013e-49 | -8.615850e-47 |
| Msa0168750 | Msa1150760 | 0.801255 | 9.816990e-49 | -8.615850e-47 |
| Msa0168750 | Msa1154060 | 0.812380 | 4.365240e-51 | -8.615850e-47 |
| Msa0168750 | Msa1154320 | 0.810002 | 1.431120e-50 | -8.615850e-47 |
| Msa0168750 | Msa1155610 | 0.821690 | 3.530462e-53 | -8.615850e-47 |
| Msa0168750 | Msa1156710 | 0.800488 | 1.407809e-48 | -8.615850e-47 |
| Msa0168750 | Msa1156720 | 0.800365 | 1.491111e-48 | -8.615850e-47 |
| Msa0168750 | Msa1156740 | 0.815786 | 7.734649e-52 | -8.615850e-47 |
| Msa0168750 | Msa1160540 | 0.807807 | 4.219463e-50 | -8.615850e-47 |
| Msa0168750 | Msa1162430 | 0.810937 | 8.990559e-51 | -8.615850e-47 |
| Msa0168750 | Msa1165460 | 0.812388 | 4.348180e-51 | -8.615850e-47 |
| Msa0168750 | Msa1184680 | 0.816250 | 6.092858e-52 | -8.615850e-47 |
| Msa0168750 | Msa1199540 | -0.805631 | 1.216280e-49 | -8.615850e-47 |
| Msa0168750 | Msa1202800 | 0.841412 | 4.825995e-58 | -8.615850e-47 |
| Msa0168750 | Msa1203440 | 0.833094 | 6.497385e-56 | -8.615850e-47 |
| Msa0168750 | Msa1203650 | 0.833795 | 4.342635e-56 | -8.615850e-47 |
| Msa0168750 | Msa1211940 | 0.889521 | 2.249267e-73 | -8.615850e-47 |
| Msa0168750 | Msa1212080 | 0.880916 | 3.699173e-70 | -8.615850e-47 |
| Msa0168750 | Msa1221270 | 0.804747 | 1.862208e-49 | -8.615850e-47 |
| Msa0168750 | Msa1223710 | 0.800865 | 1.179133e-48 | -8.615850e-47 |
| Msa0168750 | Msa1223960 | 0.804740 | 1.868684e-49 | -8.615850e-47 |
| Msa0168750 | Msa1223990 | 0.823297 | 1.494601e-53 | -8.615850e-47 |
| Msa0168750 | Msa1255210 | 0.830733 | 2.487443e-55 | -8.615850e-47 |
| Msa0168750 | Msa1255690 | 0.856010 | 4.295194e-62 | -8.615850e-47 |
| Msa0168750 | Msa1263110 | 0.839943 | 1.170678e-57 | -8.615850e-47 |
| Msa0168750 | Msa1268360 | 0.822638 | 2.128248e-53 | -8.615850e-47 |
| Msa0168750 | Msa1269200 | 0.835186 | 1.942353e-56 | -8.615850e-47 |
| Msa0168750 | Msa1269500 | 0.806760 | 7.033108e-50 | -8.615850e-47 |
| Msa0168750 | Msa1273320 | 0.840809 | 6.953521e-58 | -8.615850e-47 |
| Msa0168750 | Msa1279200 | -0.804201 | 2.420765e-49 | -8.615850e-47 |
| Msa0168750 | Msa1281780 | 0.810524 | 1.104656e-50 | -8.615850e-47 |
| Msa0168750 | Msa1283930 | 0.807600 | 4.670682e-50 | -8.615850e-47 |
| Msa0168750 | Msa1284020 | 0.844196 | 8.779125e-59 | -8.615850e-47 |
| Msa0168750 | Msa1286860 | -0.810697 | 1.013091e-50 | -8.615850e-47 |
| Msa0168750 | Msa1291070 | -0.800069 | 1.713455e-48 | -8.615850e-47 |
| Msa0168750 | Msa1295210 | -0.812053 | 5.145308e-51 | -8.615850e-47 |
| Msa0168750 | Msa1295650 | 0.830052 | 3.649028e-55 | -8.615850e-47 |
| Msa0168750 | Msa1301280 | -0.803937 | 2.745748e-49 | -8.615850e-47 |
| Msa0168750 | Msa1320160 | 0.811158 | 8.053978e-51 | -8.615850e-47 |
| Msa0168750 | Msa1322500 | 0.800669 | 1.293007e-48 | -8.615850e-47 |
| Msa0168750 | Msa1322960 | 0.818237 | 2.176249e-52 | -8.615850e-47 |
| Msa0168750 | Msa1323070 | 0.819612 | 1.059920e-52 | -8.615850e-47 |
| Msa0168750 | Msa1331570 | -0.808466 | 3.054692e-50 | -8.615850e-47 |
| Msa0168750 | Msa1334700 | 0.829516 | 4.927745e-55 | -8.615850e-47 |
| Msa0168750 | Msa1342360 | -0.805040 | 1.617613e-49 | -8.615850e-47 |
| Msa0168750 | Msa1343600 | 0.806267 | 8.937113e-50 | -8.615850e-47 |
| Msa0168750 | Msa1344450 | 0.877468 | 6.135036e-69 | -8.615850e-47 |
| Msa0168750 | Msa1361980 | 0.819569 | 1.084319e-52 | -8.615850e-47 |
| Msa0168750 | Msa1376880 | 0.853650 | 2.077231e-61 | -8.615850e-47 |
| Msa0168750 | Msa1384130 | 0.867635 | 1.183300e-65 | -8.615850e-47 |
| Msa0168750 | Msa1384700 | 0.811337 | 7.363839e-51 | -8.615850e-47 |
| Msa0168750 | Msa1386830 | 0.851289 | 9.780034e-61 | -8.615850e-47 |
| Msa0168750 | Msa1395080 | 0.886434 | 3.431312e-72 | -8.615850e-47 |
| Msa0168750 | Msa1405830 | 0.829390 | 5.286448e-55 | -8.615850e-47 |
| Msa0168750 | Msa1407810 | 0.854986 | 8.537809e-62 | -8.615850e-47 |
| Msa0168750 | Msa1413450 | 0.878906 | 1.921651e-69 | -8.615850e-47 |
| Msa0168750 | Msa1430950 | 0.908760 | 1.201769e-81 | -8.615850e-47 |
| Msa0168750 | Msa1433040 | 0.832097 | 1.147828e-55 | -8.615850e-47 |
| Msa0168750 | Msa1433360 | 0.861551 | 9.475311e-64 | -8.615850e-47 |
| Msa0168750 | Msa1437780 | 0.855702 | 5.284706e-62 | -8.615850e-47 |
| Msa0168750 | Msa1439250 | 0.811087 | 8.343069e-51 | -8.615850e-47 |
| Msa0168750 | Msa1445530 | 0.823302 | 1.490176e-53 | -8.615850e-47 |
| Msa0168750 | Msa1448820 | 0.838462 | 2.834870e-57 | -8.615850e-47 |
| Msa0168750 | Msa1455360 | 0.800713 | 1.266668e-48 | -8.615850e-47 |
| Msa0168750 | Msa1459130 | -0.801395 | 9.190089e-49 | -8.615850e-47 |
| Msa0168750 | Msa1462610 | 0.836422 | 9.447325e-57 | -8.615850e-47 |
| Msa0168750 | Msa1464140 | 0.839265 | 1.757398e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168750 | MtrunA17_Chr1g0185311 | 95.789 | 190 | 8 | 0 | 1 | 190 | 1 | 190 | 3.33e-131 | 365 |
| Msa0168750 | MtrunA17_Chr7g0260071 | 49.727 | 183 | 77 | 7 | 1 | 181 | 1 | 170 | 2.53e-38 | 131 |
| Msa0168750 | MtrunA17_Chr5g0394991 | 42.442 | 172 | 88 | 8 | 1 | 169 | 1 | 164 | 9.51e-33 | 116 |
| Msa0168750 | MtrunA17_Chr1g0205171 | 40.606 | 165 | 71 | 6 | 26 | 168 | 26 | 185 | 1.94e-30 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0168750 | AT2G48140.1 | 46.203 | 158 | 73 | 4 | 27 | 182 | 22 | 169 | 7.43e-36 | 124 |
| Msa0168750 | AT2G48140.2 | 58.586 | 99 | 39 | 1 | 27 | 125 | 22 | 118 | 9.60e-36 | 122 |
| Msa0168750 | AT1G05450.2 | 41.481 | 135 | 70 | 3 | 24 | 158 | 25 | 150 | 6.47e-28 | 104 |
| Msa0168750 | AT3G22620.1 | 41.860 | 86 | 47 | 2 | 32 | 117 | 29 | 111 | 7.60e-14 | 67.4 |
Find 45 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATATTCATATGCAATT+TGG | 0.201522 | 1_4:-51652262 | Msa0168750:three_prime_UTR |
| TTTAATCACATCAGTAAAAT+TGG | 0.205703 | 1_4:-51654193 | Msa0168750:CDS |
| TTGGCAGGTCCAGCTATATT+TGG | 0.239605 | 1_4:-51652637 | Msa0168750:intron |
| TGTTATTAAACCATTATAAT+TGG | 0.248933 | 1_4:+51654089 | None:intergenic |
| ATCTATGATGAGTACTAGTA+TGG | 0.275702 | 1_4:-51654037 | Msa0168750:CDS |
| GAAGGAAAGAACTCTATTAA+TGG | 0.297936 | 1_4:+51653966 | None:intergenic |
| GAGTGTTGAATTGCATATTT+AGG | 0.320907 | 1_4:+51652396 | None:intergenic |
| CTTGGGCGACTATGCTTCAT+TGG | 0.351622 | 1_4:+51652342 | None:intergenic |
| CTCAAGGGAGAAGCATTAAT+TGG | 0.353542 | 1_4:+51652592 | None:intergenic |
| ACAGGAAGCACCAATTATAA+TGG | 0.355204 | 1_4:-51654099 | Msa0168750:CDS |
| TACTTAGATGTCCCATTGTT+GGG | 0.393029 | 1_4:+51654247 | None:intergenic |
| CCATGTGCAAATTACATTAC+AGG | 0.394871 | 1_4:-51654117 | Msa0168750:CDS |
| GAATCACAACAACTACTTGA+TGG | 0.400929 | 1_4:+51654066 | None:intergenic |
| TTAATGGGTGGTAGTTGAAA+TGG | 0.405959 | 1_4:+51653982 | None:intergenic |
| AAGGAAAGAACTCTATTAAT+GGG | 0.415197 | 1_4:+51653967 | None:intergenic |
| TAGTCGCCCAAGAAAACTTC+AGG | 0.419211 | 1_4:-51652331 | Msa0168750:CDS |
| GGCTCTCCTTTACCAGCTCC+AGG | 0.442482 | 1_4:-51653757 | Msa0168750:intron |
| ATTGTGCATGGAATCCATTC+AGG | 0.446420 | 1_4:+51653923 | None:intergenic |
| ATACTTAGATGTCCCATTGT+TGG | 0.468497 | 1_4:+51654246 | None:intergenic |
| CCATTCAGGTTGCATGATTG+TGG | 0.485094 | 1_4:+51653937 | None:intergenic |
| CATTAATTGGCGGAAGAGAC+GGG | 0.492843 | 1_4:+51652605 | None:intergenic |
| ATATTTACCTTGCGGACTCA+AGG | 0.503866 | 1_4:+51652576 | None:intergenic |
| ACATTTGATCCAAATATAGC+TGG | 0.505446 | 1_4:+51652628 | None:intergenic |
| CCACAATCATGCAACCTGAA+TGG | 0.505888 | 1_4:-51653937 | Msa0168750:CDS |
| GCATTAATTGGCGGAAGAGA+CGG | 0.508648 | 1_4:+51652604 | None:intergenic |
| AGGAGAATCAGCTACCTCAA+TGG | 0.512985 | 1_4:+51652416 | None:intergenic |
| TGGATTCCATGCACAATGCA+AGG | 0.527893 | 1_4:-51653917 | Msa0168750:CDS |
| TAAGTACCTGGAGCTGGTAA+AGG | 0.529079 | 1_4:+51653751 | None:intergenic |
| ATTCTTGCAGACCCAACAAT+GGG | 0.532295 | 1_4:-51654258 | None:intergenic |
| GCATGATTGTGGAAGGAAGA+AGG | 0.544924 | 1_4:+51653948 | None:intergenic |
| TAATAATAAGTACCTGGAGC+TGG | 0.545527 | 1_4:+51653745 | None:intergenic |
| TCAGGTTGCATGATTGTGGA+AGG | 0.574464 | 1_4:+51653941 | None:intergenic |
| TATTTACCTTGCGGACTCAA+GGG | 0.591593 | 1_4:+51652577 | None:intergenic |
| CATTCTTGCAGACCCAACAA+TGG | 0.593953 | 1_4:-51654259 | None:intergenic |
| AAGGGAGAAGCATTAATTGG+CGG | 0.596813 | 1_4:+51652595 | None:intergenic |
| CGCAGTAGATGAAACCATTG+AGG | 0.601013 | 1_4:-51652430 | Msa0168750:intron |
| CCTGTAATGTAATTTGCACA+TGG | 0.606044 | 1_4:+51654117 | None:intergenic |
| GTGTACCCTTGCATTGTGCA+TGG | 0.619403 | 1_4:+51653911 | None:intergenic |
| GGATTCCATGCACAATGCAA+GGG | 0.619466 | 1_4:-51653916 | Msa0168750:intron |
| TGCAATTCAACACTCAGCAA+AGG | 0.626463 | 1_4:-51652388 | Msa0168750:CDS |
| GCTTCTCCCTTGAGTCCGCA+AGG | 0.628732 | 1_4:-51652583 | Msa0168750:intron |
| CTAATCATAGAAGCTGTGCA+AGG | 0.644182 | 1_4:+51654150 | None:intergenic |
| GAAAGAACTCTATTAATGGG+TGG | 0.644751 | 1_4:+51653970 | None:intergenic |
| TCTATGATGAGTACTAGTAT+GGG | 0.647243 | 1_4:-51654036 | Msa0168750:CDS |
| TGGTAGTTGAAATGGAACGT+TGG | 0.743680 | 1_4:+51653990 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATAAAAATGATTTTCAT+AGG | + | chr1_4:51652682-51652701 | None:intergenic | 10.0% |
| !! | TTATAAAATATGTCTAATAA+AGG | - | chr1_4:51652695-51652714 | Msa0168750:intron | 10.0% |
| !!! | AAATGAAACAATTTTTTTAA+AGG | + | chr1_4:51653225-51653244 | None:intergenic | 10.0% |
| !!! | TTTATAAAAATGATTTTCAT+AGG | + | chr1_4:51652682-51652701 | None:intergenic | 10.0% |
| !! | TTATAAAATATGTCTAATAA+AGG | - | chr1_4:51652695-51652714 | Msa0168750:intron | 10.0% |
| !!! | AAATGAAACAATTTTTTTAA+AGG | + | chr1_4:51653225-51653244 | None:intergenic | 10.0% |
| !! | TGTTATTAAACCATTATAAT+TGG | + | chr1_4:51652418-51652437 | None:intergenic | 15.0% |
| !! | TTTAATTAATAATAAGTACC+TGG | + | chr1_4:51652768-51652787 | None:intergenic | 15.0% |
| !!! | TTTTAAACATTTTATTTGCA+AGG | - | chr1_4:51652876-51652895 | Msa0168750:intron | 15.0% |
| !! | TATGTAATTAAAAACTTGAT+CGG | + | chr1_4:51652912-51652931 | None:intergenic | 15.0% |
| !!! | ATCAAGTTTTTAATTACATA+AGG | - | chr1_4:51652912-51652931 | Msa0168750:intron | 15.0% |
| !! | AAATTATATTACTTTCACTT+TGG | - | chr1_4:51653143-51653162 | Msa0168750:intron | 15.0% |
| !!! | ATGATCTTTAAAAATTATTC+AGG | - | chr1_4:51653805-51653824 | Msa0168750:intron | 15.0% |
| !! | TATGTAAACACAAAATTAAA+AGG | - | chr1_4:51653978-51653997 | Msa0168750:CDS | 15.0% |
| !! | ATGTAAACACAAAATTAAAA+GGG | - | chr1_4:51653979-51653998 | Msa0168750:CDS | 15.0% |
| !!! | ATTTTTTATGTCAACAAATT+GGG | + | chr1_4:51654038-51654057 | None:intergenic | 15.0% |
| !!! | TATTTTTTATGTCAACAAAT+TGG | + | chr1_4:51654039-51654058 | None:intergenic | 15.0% |
| !! | ATTTATATTCATATGCAATT+TGG | - | chr1_4:51654242-51654261 | Msa0168750:CDS | 15.0% |
| !! | TGTTATTAAACCATTATAAT+TGG | + | chr1_4:51652418-51652437 | None:intergenic | 15.0% |
| !! | TTTAATTAATAATAAGTACC+TGG | + | chr1_4:51652768-51652787 | None:intergenic | 15.0% |
| !!! | TTTTAAACATTTTATTTGCA+AGG | - | chr1_4:51652876-51652895 | Msa0168750:intron | 15.0% |
| !! | TATGTAATTAAAAACTTGAT+CGG | + | chr1_4:51652912-51652931 | None:intergenic | 15.0% |
| !!! | ATCAAGTTTTTAATTACATA+AGG | - | chr1_4:51652912-51652931 | Msa0168750:intron | 15.0% |
| !! | AAATTATATTACTTTCACTT+TGG | - | chr1_4:51653143-51653162 | Msa0168750:intron | 15.0% |
| !!! | ATGATCTTTAAAAATTATTC+AGG | - | chr1_4:51653805-51653824 | Msa0168750:intron | 15.0% |
| !! | TATGTAAACACAAAATTAAA+AGG | - | chr1_4:51653978-51653997 | Msa0168750:CDS | 15.0% |
| !! | ATGTAAACACAAAATTAAAA+GGG | - | chr1_4:51653979-51653998 | Msa0168750:CDS | 15.0% |
| !!! | ATTTTTTATGTCAACAAATT+GGG | + | chr1_4:51654038-51654057 | None:intergenic | 15.0% |
| !!! | TATTTTTTATGTCAACAAAT+TGG | + | chr1_4:51654039-51654058 | None:intergenic | 15.0% |
| !! | ATTTATATTCATATGCAATT+TGG | - | chr1_4:51654242-51654261 | Msa0168750:CDS | 15.0% |
| !!! | ATTTTACTGATGTGATTAAA+AGG | + | chr1_4:51652311-51652330 | None:intergenic | 20.0% |
| !! | TTTAATCACATCAGTAAAAT+TGG | - | chr1_4:51652311-51652330 | Msa0168750:exon | 20.0% |
| !!! | ATCATATAATTTGTCACAAA+AGG | + | chr1_4:51652636-51652655 | None:intergenic | 20.0% |
| !!! | TTTTGTGACAAATTATATGA+TGG | - | chr1_4:51652635-51652654 | Msa0168750:intron | 20.0% |
| !!! | TTTTCATAGGAAATTCAAAA+AGG | + | chr1_4:51652669-51652688 | None:intergenic | 20.0% |
| !! | TAAAAGCAATATTCTAAATG+AGG | + | chr1_4:51652861-51652880 | None:intergenic | 20.0% |
| !!! | AAAAAATTAGTGGACTAATA+TGG | + | chr1_4:51652989-51653008 | None:intergenic | 20.0% |
| !! | GTATCAAAATTAAACAAAAC+AGG | + | chr1_4:51653178-51653197 | None:intergenic | 20.0% |
| !!! | TTGTGGTTATATTATACTTT+TGG | + | chr1_4:51653402-51653421 | None:intergenic | 20.0% |
| !! | ATGTAACATTCATATATAAG+AGG | + | chr1_4:51653744-51653763 | None:intergenic | 20.0% |
| !!! | ATTTTACTGATGTGATTAAA+AGG | + | chr1_4:51652311-51652330 | None:intergenic | 20.0% |
| !! | TTTAATCACATCAGTAAAAT+TGG | - | chr1_4:51652311-51652330 | Msa0168750:exon | 20.0% |
| !!! | ATCATATAATTTGTCACAAA+AGG | + | chr1_4:51652636-51652655 | None:intergenic | 20.0% |
| !!! | TTTTGTGACAAATTATATGA+TGG | - | chr1_4:51652635-51652654 | Msa0168750:intron | 20.0% |
| !!! | TTTTCATAGGAAATTCAAAA+AGG | + | chr1_4:51652669-51652688 | None:intergenic | 20.0% |
| !! | TAAAAGCAATATTCTAAATG+AGG | + | chr1_4:51652861-51652880 | None:intergenic | 20.0% |
| !!! | AAAAAATTAGTGGACTAATA+TGG | + | chr1_4:51652989-51653008 | None:intergenic | 20.0% |
| !! | GTATCAAAATTAAACAAAAC+AGG | + | chr1_4:51653178-51653197 | None:intergenic | 20.0% |
| !!! | TTGTGGTTATATTATACTTT+TGG | + | chr1_4:51653402-51653421 | None:intergenic | 20.0% |
| !! | ATGTAACATTCATATATAAG+AGG | + | chr1_4:51653744-51653763 | None:intergenic | 20.0% |
| !!! | ACATCAGTAAAATTGGTTTT+TGG | - | chr1_4:51652318-51652337 | Msa0168750:CDS | 25.0% |
| ! | AAGGAAAGAACTCTATTAAT+GGG | + | chr1_4:51652540-51652559 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTAAGTAGTCCAA+TGG | - | chr1_4:51652796-51652815 | Msa0168750:intron | 25.0% |
| ! | GATGTTCTCAAAAAAATTAG+TGG | + | chr1_4:51652999-51653018 | None:intergenic | 25.0% |
| !!! | CTCTCATTTGAGTTTTTAAA+CGG | - | chr1_4:51653030-51653049 | Msa0168750:intron | 25.0% |
| ! | CAAACTGTAAAATGTTTGTA+AGG | + | chr1_4:51653200-51653219 | None:intergenic | 25.0% |
| !! | CTTACAAACATTTTACAGTT+TGG | - | chr1_4:51653198-51653217 | Msa0168750:intron | 25.0% |
| ! | ATTAGATACTTTGATGCTTT+AGG | + | chr1_4:51653315-51653334 | None:intergenic | 25.0% |
| !! | GTATCAAGTTTAAAACTACT+AGG | + | chr1_4:51653466-51653485 | None:intergenic | 25.0% |
| !!! | TGAGTTCTGGAAATATATAA+AGG | - | chr1_4:51653773-51653792 | Msa0168750:intron | 25.0% |
| !! | TGGAAATATATAAAGGTACA+TGG | - | chr1_4:51653780-51653799 | Msa0168750:intron | 25.0% |
| ! | TAACAATGATATTTACCTTG+CGG | + | chr1_4:51653939-51653958 | None:intergenic | 25.0% |
| ! | AAACACAAAATTAAAAGGGT+TGG | - | chr1_4:51653983-51654002 | Msa0168750:CDS | 25.0% |
| !!! | ACATCAGTAAAATTGGTTTT+TGG | - | chr1_4:51652318-51652337 | Msa0168750:CDS | 25.0% |
| ! | AAGGAAAGAACTCTATTAAT+GGG | + | chr1_4:51652540-51652559 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTAAGTAGTCCAA+TGG | - | chr1_4:51652796-51652815 | Msa0168750:intron | 25.0% |
| ! | GATGTTCTCAAAAAAATTAG+TGG | + | chr1_4:51652999-51653018 | None:intergenic | 25.0% |
| !!! | CTCTCATTTGAGTTTTTAAA+CGG | - | chr1_4:51653030-51653049 | Msa0168750:intron | 25.0% |
| ! | CAAACTGTAAAATGTTTGTA+AGG | + | chr1_4:51653200-51653219 | None:intergenic | 25.0% |
| !! | CTTACAAACATTTTACAGTT+TGG | - | chr1_4:51653198-51653217 | Msa0168750:intron | 25.0% |
| ! | ATTAGATACTTTGATGCTTT+AGG | + | chr1_4:51653315-51653334 | None:intergenic | 25.0% |
| !! | GTATCAAGTTTAAAACTACT+AGG | + | chr1_4:51653466-51653485 | None:intergenic | 25.0% |
| !!! | TGAGTTCTGGAAATATATAA+AGG | - | chr1_4:51653773-51653792 | Msa0168750:intron | 25.0% |
| !! | TGGAAATATATAAAGGTACA+TGG | - | chr1_4:51653780-51653799 | Msa0168750:intron | 25.0% |
| ! | TAACAATGATATTTACCTTG+CGG | + | chr1_4:51653939-51653958 | None:intergenic | 25.0% |
| ! | AAACACAAAATTAAAAGGGT+TGG | - | chr1_4:51653983-51654002 | Msa0168750:CDS | 25.0% |
| ATCTATGATGAGTACTAGTA+TGG | - | chr1_4:51652467-51652486 | Msa0168750:intron | 30.0% | |
| TCTATGATGAGTACTAGTAT+GGG | - | chr1_4:51652468-51652487 | Msa0168750:intron | 30.0% | |
| GAAGGAAAGAACTCTATTAA+TGG | + | chr1_4:51652541-51652560 | None:intergenic | 30.0% | |
| GAAAAAGAATAGGTTAGAGA+CGG | + | chr1_4:51652942-51652961 | None:intergenic | 30.0% | |
| AAAGTGTGTCGAAAAAGAAT+AGG | + | chr1_4:51652952-51652971 | None:intergenic | 30.0% | |
| TGTTCAACGTTCATAACTTA+AGG | + | chr1_4:51653253-51653272 | None:intergenic | 30.0% | |
| AACCACAAATTTACTAGCTA+TGG | - | chr1_4:51653414-51653433 | Msa0168750:intron | 30.0% | |
| TTCCATAGCTAGTAAATTTG+TGG | + | chr1_4:51653419-51653438 | None:intergenic | 30.0% | |
| AAAAAGATGATAGCATGCTT+CGG | + | chr1_4:51653488-51653507 | None:intergenic | 30.0% | |
| TAAATAAGCACTCACATTTC+AGG | + | chr1_4:51653577-51653596 | None:intergenic | 30.0% | |
| ACATTTGATCCAAATATAGC+TGG | + | chr1_4:51653879-51653898 | None:intergenic | 30.0% | |
| ACAAATTGGGTGATGTATAA+TGG | + | chr1_4:51654025-51654044 | None:intergenic | 30.0% | |
| !! | GAGTGTTGAATTGCATATTT+AGG | + | chr1_4:51654111-51654130 | None:intergenic | 30.0% |
| !!! | TTCATTGGTACTAGTTTTGT+CGG | + | chr1_4:51654150-51654169 | None:intergenic | 30.0% |
| ! | TGAATTCCTGAAGTTTTCTT+GGG | + | chr1_4:51654182-51654201 | None:intergenic | 30.0% |
| ! | TTGAATTCCTGAAGTTTTCT+TGG | + | chr1_4:51654183-51654202 | None:intergenic | 30.0% |
| ATCTATGATGAGTACTAGTA+TGG | - | chr1_4:51652467-51652486 | Msa0168750:intron | 30.0% | |
| TCTATGATGAGTACTAGTAT+GGG | - | chr1_4:51652468-51652487 | Msa0168750:intron | 30.0% | |
| GAAGGAAAGAACTCTATTAA+TGG | + | chr1_4:51652541-51652560 | None:intergenic | 30.0% | |
| GAAAAAGAATAGGTTAGAGA+CGG | + | chr1_4:51652942-51652961 | None:intergenic | 30.0% | |
| AAAGTGTGTCGAAAAAGAAT+AGG | + | chr1_4:51652952-51652971 | None:intergenic | 30.0% | |
| TGTTCAACGTTCATAACTTA+AGG | + | chr1_4:51653253-51653272 | None:intergenic | 30.0% | |
| AACCACAAATTTACTAGCTA+TGG | - | chr1_4:51653414-51653433 | Msa0168750:intron | 30.0% | |
| TTCCATAGCTAGTAAATTTG+TGG | + | chr1_4:51653419-51653438 | None:intergenic | 30.0% | |
| AAAAAGATGATAGCATGCTT+CGG | + | chr1_4:51653488-51653507 | None:intergenic | 30.0% | |
| TAAATAAGCACTCACATTTC+AGG | + | chr1_4:51653577-51653596 | None:intergenic | 30.0% | |
| ACATTTGATCCAAATATAGC+TGG | + | chr1_4:51653879-51653898 | None:intergenic | 30.0% | |
| ACAAATTGGGTGATGTATAA+TGG | + | chr1_4:51654025-51654044 | None:intergenic | 30.0% | |
| !! | GAGTGTTGAATTGCATATTT+AGG | + | chr1_4:51654111-51654130 | None:intergenic | 30.0% |
| !!! | TTCATTGGTACTAGTTTTGT+CGG | + | chr1_4:51654150-51654169 | None:intergenic | 30.0% |
| ! | TGAATTCCTGAAGTTTTCTT+GGG | + | chr1_4:51654182-51654201 | None:intergenic | 30.0% |
| ! | TTGAATTCCTGAAGTTTTCT+TGG | + | chr1_4:51654183-51654202 | None:intergenic | 30.0% |
| ! | CCTGTAATGTAATTTGCACA+TGG | + | chr1_4:51652390-51652409 | None:intergenic | 35.0% |
| CCATGTGCAAATTACATTAC+AGG | - | chr1_4:51652387-51652406 | Msa0168750:CDS | 35.0% | |
| !! | ACAGGAAGCACCAATTATAA+TGG | - | chr1_4:51652405-51652424 | Msa0168750:CDS | 35.0% |
| GAATCACAACAACTACTTGA+TGG | + | chr1_4:51652441-51652460 | None:intergenic | 35.0% | |
| ! | TTAATGGGTGGTAGTTGAAA+TGG | + | chr1_4:51652525-51652544 | None:intergenic | 35.0% |
| GAAAGAACTCTATTAATGGG+TGG | + | chr1_4:51652537-51652556 | None:intergenic | 35.0% | |
| AATTTGTAAACTGCAGCTTC+TGG | - | chr1_4:51652726-51652745 | Msa0168750:intron | 35.0% | |
| TAATAATAAGTACCTGGAGC+TGG | + | chr1_4:51652762-51652781 | None:intergenic | 35.0% | |
| ! | GCTATCATCTTTTTATGCCA+TGG | - | chr1_4:51653494-51653513 | Msa0168750:intron | 35.0% |
| ! | ATTTTCTTTGGCATAAGCCA+TGG | + | chr1_4:51653514-51653533 | None:intergenic | 35.0% |
| ! | GGTCAACATTGGATTTTCTT+TGG | + | chr1_4:51653526-51653545 | None:intergenic | 35.0% |
| CACAAATTCATGGTCAACAT+TGG | + | chr1_4:51653537-51653556 | None:intergenic | 35.0% | |
| ! | ATATCTGAGACCATCTATGA+TGG | + | chr1_4:51653641-51653660 | None:intergenic | 35.0% |
| ! | CCTGTAATGTAATTTGCACA+TGG | + | chr1_4:51652390-51652409 | None:intergenic | 35.0% |
| CCATGTGCAAATTACATTAC+AGG | - | chr1_4:51652387-51652406 | Msa0168750:CDS | 35.0% | |
| !! | ACAGGAAGCACCAATTATAA+TGG | - | chr1_4:51652405-51652424 | Msa0168750:CDS | 35.0% |
| GAATCACAACAACTACTTGA+TGG | + | chr1_4:51652441-51652460 | None:intergenic | 35.0% | |
| ! | TTAATGGGTGGTAGTTGAAA+TGG | + | chr1_4:51652525-51652544 | None:intergenic | 35.0% |
| GAAAGAACTCTATTAATGGG+TGG | + | chr1_4:51652537-51652556 | None:intergenic | 35.0% | |
| AATTTGTAAACTGCAGCTTC+TGG | - | chr1_4:51652726-51652745 | Msa0168750:intron | 35.0% | |
| TAATAATAAGTACCTGGAGC+TGG | + | chr1_4:51652762-51652781 | None:intergenic | 35.0% | |
| ! | GCTATCATCTTTTTATGCCA+TGG | - | chr1_4:51653494-51653513 | Msa0168750:intron | 35.0% |
| ! | ATTTTCTTTGGCATAAGCCA+TGG | + | chr1_4:51653514-51653533 | None:intergenic | 35.0% |
| ! | GGTCAACATTGGATTTTCTT+TGG | + | chr1_4:51653526-51653545 | None:intergenic | 35.0% |
| CACAAATTCATGGTCAACAT+TGG | + | chr1_4:51653537-51653556 | None:intergenic | 35.0% | |
| ! | ATATCTGAGACCATCTATGA+TGG | + | chr1_4:51653641-51653660 | None:intergenic | 35.0% |
| CTAATCATAGAAGCTGTGCA+AGG | + | chr1_4:51652357-51652376 | None:intergenic | 40.0% | |
| TGGTAGTTGAAATGGAACGT+TGG | + | chr1_4:51652517-51652536 | None:intergenic | 40.0% | |
| ATTGTGCATGGAATCCATTC+AGG | + | chr1_4:51652584-51652603 | None:intergenic | 40.0% | |
| CACACTGTCTCACAAATTCA+TGG | + | chr1_4:51653547-51653566 | None:intergenic | 40.0% | |
| TAAGCACTCACATTTCAGGA+GGG | + | chr1_4:51653573-51653592 | None:intergenic | 40.0% | |
| ATAAGCACTCACATTTCAGG+AGG | + | chr1_4:51653574-51653593 | None:intergenic | 40.0% | |
| CCAACAAAAGCAAAGGAAAG+AGG | + | chr1_4:51653851-51653870 | None:intergenic | 40.0% | |
| !! | CCTCTTTCCTTTGCTTTTGT+TGG | - | chr1_4:51653848-51653867 | Msa0168750:intron | 40.0% |
| !! | TTTCCTTTGCTTTTGTTGGC+AGG | - | chr1_4:51653852-51653871 | Msa0168750:intron | 40.0% |
| !! | AAGGGAGAAGCATTAATTGG+CGG | + | chr1_4:51653912-51653931 | None:intergenic | 40.0% |
| !! | CTCAAGGGAGAAGCATTAAT+TGG | + | chr1_4:51653915-51653934 | None:intergenic | 40.0% |
| TATTTACCTTGCGGACTCAA+GGG | + | chr1_4:51653930-51653949 | None:intergenic | 40.0% | |
| ATATTTACCTTGCGGACTCA+AGG | + | chr1_4:51653931-51653950 | None:intergenic | 40.0% | |
| TGCAATTCAACACTCAGCAA+AGG | - | chr1_4:51654116-51654135 | Msa0168750:CDS | 40.0% | |
| CTAATCATAGAAGCTGTGCA+AGG | + | chr1_4:51652357-51652376 | None:intergenic | 40.0% | |
| TGGTAGTTGAAATGGAACGT+TGG | + | chr1_4:51652517-51652536 | None:intergenic | 40.0% | |
| ATTGTGCATGGAATCCATTC+AGG | + | chr1_4:51652584-51652603 | None:intergenic | 40.0% | |
| CACACTGTCTCACAAATTCA+TGG | + | chr1_4:51653547-51653566 | None:intergenic | 40.0% | |
| TAAGCACTCACATTTCAGGA+GGG | + | chr1_4:51653573-51653592 | None:intergenic | 40.0% | |
| ATAAGCACTCACATTTCAGG+AGG | + | chr1_4:51653574-51653593 | None:intergenic | 40.0% | |
| CCAACAAAAGCAAAGGAAAG+AGG | + | chr1_4:51653851-51653870 | None:intergenic | 40.0% | |
| !! | CCTCTTTCCTTTGCTTTTGT+TGG | - | chr1_4:51653848-51653867 | Msa0168750:intron | 40.0% |
| !! | TTTCCTTTGCTTTTGTTGGC+AGG | - | chr1_4:51653852-51653871 | Msa0168750:intron | 40.0% |
| !! | AAGGGAGAAGCATTAATTGG+CGG | + | chr1_4:51653912-51653931 | None:intergenic | 40.0% |
| !! | CTCAAGGGAGAAGCATTAAT+TGG | + | chr1_4:51653915-51653934 | None:intergenic | 40.0% |
| TATTTACCTTGCGGACTCAA+GGG | + | chr1_4:51653930-51653949 | None:intergenic | 40.0% | |
| ATATTTACCTTGCGGACTCA+AGG | + | chr1_4:51653931-51653950 | None:intergenic | 40.0% | |
| TGCAATTCAACACTCAGCAA+AGG | - | chr1_4:51654116-51654135 | Msa0168750:CDS | 40.0% | |
| GCATGATTGTGGAAGGAAGA+AGG | + | chr1_4:51652559-51652578 | None:intergenic | 45.0% | |
| ! | TCAGGTTGCATGATTGTGGA+AGG | + | chr1_4:51652566-51652585 | None:intergenic | 45.0% |
| !! | CCATTCAGGTTGCATGATTG+TGG | + | chr1_4:51652570-51652589 | None:intergenic | 45.0% |
| CCACAATCATGCAACCTGAA+TGG | - | chr1_4:51652567-51652586 | Msa0168750:intron | 45.0% | |
| TGGATTCCATGCACAATGCA+AGG | - | chr1_4:51652587-51652606 | Msa0168750:CDS | 45.0% | |
| GGATTCCATGCACAATGCAA+GGG | - | chr1_4:51652588-51652607 | Msa0168750:CDS | 45.0% | |
| TAAGTACCTGGAGCTGGTAA+AGG | + | chr1_4:51652756-51652775 | None:intergenic | 45.0% | |
| GTCCAATGGCTAAACTCATG+TGG | - | chr1_4:51652810-51652829 | Msa0168750:intron | 45.0% | |
| CTCCACATGAGTTTAGCCAT+TGG | + | chr1_4:51652815-51652834 | None:intergenic | 45.0% | |
| AAGCACTCACATTTCAGGAG+GGG | + | chr1_4:51653572-51653591 | None:intergenic | 45.0% | |
| ! | TCTATGATGGCGTGGAGAAA+AGG | + | chr1_4:51653628-51653647 | None:intergenic | 45.0% |
| TTTCTCCACGCCATCATAGA+TGG | - | chr1_4:51653628-51653647 | Msa0168750:intron | 45.0% | |
| ACATGCTCAACGTTGAGTTC+TGG | - | chr1_4:51653760-51653779 | Msa0168750:CDS | 45.0% | |
| TTGGCAGGTCCAGCTATATT+TGG | - | chr1_4:51653867-51653886 | Msa0168750:intron | 45.0% | |
| CATTAATTGGCGGAAGAGAC+GGG | + | chr1_4:51653902-51653921 | None:intergenic | 45.0% | |
| GCATTAATTGGCGGAAGAGA+CGG | + | chr1_4:51653903-51653922 | None:intergenic | 45.0% | |
| CGCAGTAGATGAAACCATTG+AGG | - | chr1_4:51654074-51654093 | Msa0168750:CDS | 45.0% | |
| AGGAGAATCAGCTACCTCAA+TGG | + | chr1_4:51654091-51654110 | None:intergenic | 45.0% | |
| TAGTCGCCCAAGAAAACTTC+AGG | - | chr1_4:51654173-51654192 | Msa0168750:CDS | 45.0% | |
| GCATGATTGTGGAAGGAAGA+AGG | + | chr1_4:51652559-51652578 | None:intergenic | 45.0% | |
| ! | TCAGGTTGCATGATTGTGGA+AGG | + | chr1_4:51652566-51652585 | None:intergenic | 45.0% |
| !! | CCATTCAGGTTGCATGATTG+TGG | + | chr1_4:51652570-51652589 | None:intergenic | 45.0% |
| CCACAATCATGCAACCTGAA+TGG | - | chr1_4:51652567-51652586 | Msa0168750:intron | 45.0% | |
| TGGATTCCATGCACAATGCA+AGG | - | chr1_4:51652587-51652606 | Msa0168750:CDS | 45.0% | |
| GGATTCCATGCACAATGCAA+GGG | - | chr1_4:51652588-51652607 | Msa0168750:CDS | 45.0% | |
| TAAGTACCTGGAGCTGGTAA+AGG | + | chr1_4:51652756-51652775 | None:intergenic | 45.0% | |
| GTCCAATGGCTAAACTCATG+TGG | - | chr1_4:51652810-51652829 | Msa0168750:intron | 45.0% | |
| CTCCACATGAGTTTAGCCAT+TGG | + | chr1_4:51652815-51652834 | None:intergenic | 45.0% | |
| AAGCACTCACATTTCAGGAG+GGG | + | chr1_4:51653572-51653591 | None:intergenic | 45.0% | |
| ! | TCTATGATGGCGTGGAGAAA+AGG | + | chr1_4:51653628-51653647 | None:intergenic | 45.0% |
| TTTCTCCACGCCATCATAGA+TGG | - | chr1_4:51653628-51653647 | Msa0168750:intron | 45.0% | |
| ACATGCTCAACGTTGAGTTC+TGG | - | chr1_4:51653760-51653779 | Msa0168750:CDS | 45.0% | |
| TTGGCAGGTCCAGCTATATT+TGG | - | chr1_4:51653867-51653886 | Msa0168750:intron | 45.0% | |
| CATTAATTGGCGGAAGAGAC+GGG | + | chr1_4:51653902-51653921 | None:intergenic | 45.0% | |
| GCATTAATTGGCGGAAGAGA+CGG | + | chr1_4:51653903-51653922 | None:intergenic | 45.0% | |
| CGCAGTAGATGAAACCATTG+AGG | - | chr1_4:51654074-51654093 | Msa0168750:CDS | 45.0% | |
| AGGAGAATCAGCTACCTCAA+TGG | + | chr1_4:51654091-51654110 | None:intergenic | 45.0% | |
| TAGTCGCCCAAGAAAACTTC+AGG | - | chr1_4:51654173-51654192 | Msa0168750:CDS | 45.0% | |
| GTGTACCCTTGCATTGTGCA+TGG | + | chr1_4:51652596-51652615 | None:intergenic | 50.0% | |
| ! | TGAGACCATCTATGATGGCG+TGG | + | chr1_4:51653636-51653655 | None:intergenic | 50.0% |
| GGACCTGCCAACAAAAGCAA+AGG | + | chr1_4:51653858-51653877 | None:intergenic | 50.0% | |
| !!! | GGTACTAGTTTTGTCGGTGC+TGG | + | chr1_4:51654144-51654163 | None:intergenic | 50.0% |
| CTTGGGCGACTATGCTTCAT+TGG | + | chr1_4:51654165-51654184 | None:intergenic | 50.0% | |
| GTGTACCCTTGCATTGTGCA+TGG | + | chr1_4:51652596-51652615 | None:intergenic | 50.0% | |
| ! | TGAGACCATCTATGATGGCG+TGG | + | chr1_4:51653636-51653655 | None:intergenic | 50.0% |
| GGACCTGCCAACAAAAGCAA+AGG | + | chr1_4:51653858-51653877 | None:intergenic | 50.0% | |
| !!! | GGTACTAGTTTTGTCGGTGC+TGG | + | chr1_4:51654144-51654163 | None:intergenic | 50.0% |
| CTTGGGCGACTATGCTTCAT+TGG | + | chr1_4:51654165-51654184 | None:intergenic | 50.0% | |
| GGCTCTCCTTTACCAGCTCC+AGG | - | chr1_4:51652747-51652766 | Msa0168750:intron | 60.0% | |
| GCTTCTCCCTTGAGTCCGCA+AGG | - | chr1_4:51653921-51653940 | Msa0168750:CDS | 60.0% | |
| GGCTCTCCTTTACCAGCTCC+AGG | - | chr1_4:51652747-51652766 | Msa0168750:intron | 60.0% | |
| GCTTCTCCCTTGAGTCCGCA+AGG | - | chr1_4:51653921-51653940 | Msa0168750:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 51652259 | 51654267 | 51652259 | ID=Msa0168750;Name=Msa0168750 |
| chr1_4 | mRNA | 51652259 | 51654267 | 51652259 | ID=Msa0168750-mRNA-1;Parent=Msa0168750;Name=Msa0168750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=5|1|1|1|1|1|4|58|190 |
| chr1_4 | exon | 51652259 | 51652447 | 51652259 | ID=Msa0168750-mRNA-1:exon:15238;Parent=Msa0168750-mRNA-1 |
| chr1_4 | exon | 51652584 | 51652652 | 51652584 | ID=Msa0168750-mRNA-1:exon:15237;Parent=Msa0168750-mRNA-1 |
| chr1_4 | exon | 51653758 | 51653784 | 51653758 | ID=Msa0168750-mRNA-1:exon:15236;Parent=Msa0168750-mRNA-1 |
| chr1_4 | exon | 51653917 | 51654267 | 51653917 | ID=Msa0168750-mRNA-1:exon:15235;Parent=Msa0168750-mRNA-1 |
| chr1_4 | five_prime_UTR | 51654263 | 51654267 | 51654263 | ID=Msa0168750-mRNA-1:five_prime_utr;Parent=Msa0168750-mRNA-1 |
| chr1_4 | CDS | 51653917 | 51654262 | 51653917 | ID=Msa0168750-mRNA-1:cds;Parent=Msa0168750-mRNA-1 |
| chr1_4 | CDS | 51653758 | 51653784 | 51653758 | ID=Msa0168750-mRNA-1:cds;Parent=Msa0168750-mRNA-1 |
| chr1_4 | CDS | 51652584 | 51652652 | 51652584 | ID=Msa0168750-mRNA-1:cds;Parent=Msa0168750-mRNA-1 |
| chr1_4 | CDS | 51652317 | 51652447 | 51652317 | ID=Msa0168750-mRNA-1:cds;Parent=Msa0168750-mRNA-1 |
| chr1_4 | three_prime_UTR | 51652259 | 51652316 | 51652259 | ID=Msa0168750-mRNA-1:three_prime_utr;Parent=Msa0168750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
