Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430950 | XP_014518565.1 | 56.291 | 151 | 37 | 3 | 1 | 123 | 1 | 150 | 8.77e-32 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430950 | A0A1S3VJV3 | 56.291 | 151 | 37 | 3 | 1 | 123 | 1 | 150 | 4.19e-32 | 120 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013270 | Msa1430950 | 0.809283 | 2.042341e-50 | -8.615850e-47 |
| Msa0015950 | Msa1430950 | 0.860869 | 1.528369e-63 | -8.615850e-47 |
| Msa0015960 | Msa1430950 | 0.865534 | 5.509652e-65 | -8.615850e-47 |
| Msa0016070 | Msa1430950 | 0.856041 | 4.205923e-62 | -8.615850e-47 |
| Msa0016080 | Msa1430950 | 0.869121 | 3.925756e-66 | -8.615850e-47 |
| Msa0025570 | Msa1430950 | 0.803850 | 2.862725e-49 | -8.615850e-47 |
| Msa0028690 | Msa1430950 | 0.914433 | 1.929002e-84 | -8.615850e-47 |
| Msa0038150 | Msa1430950 | -0.803739 | 3.019535e-49 | -8.615850e-47 |
| Msa0041630 | Msa1430950 | 0.850996 | 1.182853e-60 | -8.615850e-47 |
| Msa0047660 | Msa1430950 | -0.843898 | 1.055809e-58 | -8.615850e-47 |
| Msa0048380 | Msa1430950 | 0.806024 | 1.005326e-49 | -8.615850e-47 |
| Msa0060410 | Msa1430950 | 0.845246 | 4.576828e-59 | -8.615850e-47 |
| Msa0062190 | Msa1430950 | 0.806982 | 6.313715e-50 | -8.615850e-47 |
| Msa0072180 | Msa1430950 | 0.819749 | 9.864310e-53 | -8.615850e-47 |
| Msa0076350 | Msa1430950 | 0.817436 | 3.300902e-52 | -8.615850e-47 |
| Msa0089190 | Msa1430950 | 0.850903 | 1.256822e-60 | -8.615850e-47 |
| Msa0098380 | Msa1430950 | 0.813733 | 2.204072e-51 | -8.615850e-47 |
| Msa0106540 | Msa1430950 | 0.801193 | 1.010570e-48 | -8.615850e-47 |
| Msa0117650 | Msa1430950 | 0.805020 | 1.632748e-49 | -8.615850e-47 |
| Msa0119240 | Msa1430950 | 0.883614 | 3.864197e-71 | -8.615850e-47 |
| Msa1344450 | Msa1430950 | 0.884900 | 1.291233e-71 | -8.615850e-47 |
| Msa1376880 | Msa1430950 | 0.817714 | 2.857405e-52 | -8.615850e-47 |
| Msa1384130 | Msa1430950 | 0.862688 | 4.245770e-64 | -8.615850e-47 |
| Msa1384700 | Msa1430950 | 0.806924 | 6.495112e-50 | -8.615850e-47 |
| Msa1386830 | Msa1430950 | 0.816703 | 4.822606e-52 | -8.615850e-47 |
| Msa1388720 | Msa1430950 | -0.807920 | 3.993904e-50 | -8.615850e-47 |
| Msa1395080 | Msa1430950 | 0.865194 | 7.047438e-65 | -8.615850e-47 |
| Msa1405530 | Msa1430950 | 0.808610 | 2.846666e-50 | -8.615850e-47 |
| Msa1407810 | Msa1430950 | 0.824281 | 8.789443e-54 | -8.615850e-47 |
| Msa1408390 | Msa1430950 | 0.805788 | 1.126901e-49 | -8.615850e-47 |
| Msa1413450 | Msa1430950 | 0.881762 | 1.832453e-70 | -8.615850e-47 |
| Msa1430950 | Msa1432730 | -0.800854 | 1.185205e-48 | -8.615850e-47 |
| Msa1430950 | Msa1433040 | 0.832092 | 1.151328e-55 | -8.615850e-47 |
| Msa1430950 | Msa1433360 | 0.834226 | 3.387691e-56 | -8.615850e-47 |
| Msa1430950 | Msa1433570 | 0.815104 | 1.096943e-51 | -8.615850e-47 |
| Msa1430950 | Msa1437780 | 0.824945 | 6.129103e-54 | -8.615850e-47 |
| Msa1430950 | Msa1439250 | 0.825104 | 5.623319e-54 | -8.615850e-47 |
| Msa1430950 | Msa1442200 | 0.806222 | 9.133079e-50 | -8.615850e-47 |
| Msa1430950 | Msa1445530 | 0.815277 | 1.003938e-51 | -8.615850e-47 |
| Msa1430950 | Msa1448820 | 0.825384 | 4.826810e-54 | -8.615850e-47 |
| Msa1430950 | Msa1452230 | -0.807863 | 4.105532e-50 | -8.615850e-47 |
| Msa1430950 | Msa1455360 | 0.806790 | 6.930976e-50 | -8.615850e-47 |
| Msa1430950 | Msa1462610 | 0.825125 | 5.560169e-54 | -8.615850e-47 |
| Msa1430950 | Msa1464140 | 0.817040 | 4.051796e-52 | -8.615850e-47 |
| Msa0603300 | Msa1430950 | 0.807555 | 4.773228e-50 | -8.615850e-47 |
| Msa0603310 | Msa1430950 | 0.802444 | 5.593598e-49 | -8.615850e-47 |
| Msa0619030 | Msa1430950 | -0.824513 | 7.752189e-54 | -8.615850e-47 |
| Msa0637590 | Msa1430950 | 0.801039 | 1.086515e-48 | -8.615850e-47 |
| Msa0643230 | Msa1430950 | 0.822203 | 2.685904e-53 | -8.615850e-47 |
| Msa0644330 | Msa1430950 | 0.823987 | 1.030346e-53 | -8.615850e-47 |
| Msa0644340 | Msa1430950 | 0.826337 | 2.866961e-54 | -8.615850e-47 |
| Msa0647300 | Msa1430950 | 0.823110 | 1.652296e-53 | -8.615850e-47 |
| Msa0655370 | Msa1430950 | 0.800081 | 1.703748e-48 | -8.615850e-47 |
| Msa0657710 | Msa1430950 | 0.812051 | 5.150631e-51 | -8.615850e-47 |
| Msa0658150 | Msa1430950 | 0.868322 | 7.115127e-66 | -8.615850e-47 |
| Msa0661410 | Msa1430950 | 0.859337 | 4.434440e-63 | -8.615850e-47 |
| Msa0661420 | Msa1430950 | 0.862102 | 6.424739e-64 | -8.615850e-47 |
| Msa0679220 | Msa1430950 | 0.817953 | 2.523016e-52 | -8.615850e-47 |
| Msa0682110 | Msa1430950 | 0.831779 | 1.375339e-55 | -8.615850e-47 |
| Msa0682160 | Msa1430950 | 0.818944 | 1.504313e-52 | -8.615850e-47 |
| Msa0686830 | Msa1430950 | 0.824751 | 6.810625e-54 | -8.615850e-47 |
| Msa0691320 | Msa1430950 | -0.826192 | 3.105028e-54 | -8.615850e-47 |
| Msa0702800 | Msa1430950 | 0.813895 | 2.030463e-51 | -8.615850e-47 |
| Msa0703000 | Msa1430950 | 0.865537 | 5.495108e-65 | -8.615850e-47 |
| Msa0707330 | Msa1430950 | 0.806602 | 7.597593e-50 | -8.615850e-47 |
| Msa0714230 | Msa1430950 | -0.806914 | 6.526105e-50 | -8.615850e-47 |
| Msa0724860 | Msa1430950 | 0.834017 | 3.822162e-56 | -8.615850e-47 |
| Msa0736920 | Msa1430950 | 0.818702 | 1.707296e-52 | -8.615850e-47 |
| Msa0742370 | Msa1430950 | -0.827657 | 1.385947e-54 | -8.615850e-47 |
| Msa0743370 | Msa1430950 | 0.812698 | 3.719557e-51 | -8.615850e-47 |
| Msa0744710 | Msa1430950 | 0.822178 | 2.721346e-53 | -8.615850e-47 |
| Msa0769540 | Msa1430950 | 0.862818 | 3.870059e-64 | -8.615850e-47 |
| Msa0773030 | Msa1430950 | 0.922175 | 1.383227e-88 | -8.615850e-47 |
| Msa0778570 | Msa1430950 | 0.823305 | 1.488028e-53 | -8.615850e-47 |
| Msa0792410 | Msa1430950 | 0.820886 | 5.413032e-53 | -8.615850e-47 |
| Msa0794100 | Msa1430950 | 0.801656 | 8.122682e-49 | -8.615850e-47 |
| Msa0795910 | Msa1430950 | -0.806726 | 7.152424e-50 | -8.615850e-47 |
| Msa0800120 | Msa1430950 | 0.827709 | 1.346687e-54 | -8.615850e-47 |
| Msa0800150 | Msa1430950 | 0.854131 | 1.510189e-61 | -8.615850e-47 |
| Msa0800180 | Msa1430950 | 0.828835 | 7.207922e-55 | -8.615850e-47 |
| Msa0810330 | Msa1430950 | 0.941526 | 3.566208e-101 | -8.615850e-47 |
| Msa0810450 | Msa1430950 | 0.809117 | 2.217397e-50 | -8.615850e-47 |
| Msa0812720 | Msa1430950 | 0.860441 | 2.061720e-63 | -8.615850e-47 |
| Msa0815940 | Msa1430950 | 0.811771 | 5.924685e-51 | -8.615850e-47 |
| Msa0823480 | Msa1430950 | -0.846091 | 2.699321e-59 | -8.615850e-47 |
| Msa0826240 | Msa1430950 | 0.821480 | 3.948972e-53 | -8.615850e-47 |
| Msa0828960 | Msa1430950 | 0.807216 | 5.632861e-50 | -8.615850e-47 |
| Msa0829250 | Msa1430950 | -0.804063 | 2.585311e-49 | -8.615850e-47 |
| Msa0831310 | Msa1430950 | 0.831765 | 1.386252e-55 | -8.615850e-47 |
| Msa0833360 | Msa1430950 | -0.802658 | 5.053239e-49 | -8.615850e-47 |
| Msa0838210 | Msa1430950 | 0.809639 | 1.712724e-50 | -8.615850e-47 |
| Msa0136000 | Msa1430950 | 0.867510 | 1.297820e-65 | -8.615850e-47 |
| Msa0136180 | Msa1430950 | -0.802276 | 6.058878e-49 | -8.615850e-47 |
| Msa0145050 | Msa1430950 | 0.809019 | 2.327246e-50 | -8.615850e-47 |
| Msa0161230 | Msa1430950 | 0.816581 | 5.137287e-52 | -8.615850e-47 |
| Msa0163690 | Msa1430950 | 0.811653 | 6.286796e-51 | -8.615850e-47 |
| Msa0168750 | Msa1430950 | 0.908760 | 1.201769e-81 | -8.615850e-47 |
| Msa0189990 | Msa1430950 | 0.940221 | 3.381049e-100 | -8.615850e-47 |
| Msa0193950 | Msa1430950 | 0.840068 | 1.086279e-57 | -8.615850e-47 |
| Msa0210610 | Msa1430950 | 0.831450 | 1.658214e-55 | -8.615850e-47 |
| Msa0217060 | Msa1430950 | 0.820881 | 5.426675e-53 | -8.615850e-47 |
| Msa0218500 | Msa1430950 | 0.827146 | 1.837581e-54 | -8.615850e-47 |
| Msa0224870 | Msa1430950 | 0.819597 | 1.068300e-52 | -8.615850e-47 |
| Msa0234150 | Msa1430950 | 0.803634 | 3.174293e-49 | -8.615850e-47 |
| Msa0235820 | Msa1430950 | 0.806684 | 7.300131e-50 | -8.615850e-47 |
| Msa1247200 | Msa1430950 | -0.800201 | 1.610647e-48 | -8.615850e-47 |
| Msa1255210 | Msa1430950 | 0.844714 | 6.370309e-59 | -8.615850e-47 |
| Msa1255690 | Msa1430950 | 0.836712 | 7.968982e-57 | -8.615850e-47 |
| Msa1263110 | Msa1430950 | 0.814052 | 1.875272e-51 | -8.615850e-47 |
| Msa1268360 | Msa1430950 | 0.832368 | 9.838745e-56 | -8.615850e-47 |
| Msa1268390 | Msa1430950 | 0.835868 | 1.306305e-56 | -8.615850e-47 |
| Msa1268420 | Msa1430950 | 0.818031 | 2.423335e-52 | -8.615850e-47 |
| Msa1269200 | Msa1430950 | 0.849186 | 3.801684e-60 | -8.615850e-47 |
| Msa1273320 | Msa1430950 | 0.823894 | 1.083243e-53 | -8.615850e-47 |
| Msa1284020 | Msa1430950 | 0.827788 | 1.289456e-54 | -8.615850e-47 |
| Msa1287100 | Msa1430950 | -0.803675 | 3.112768e-49 | -8.615850e-47 |
| Msa1295210 | Msa1430950 | -0.803984 | 2.685151e-49 | -8.615850e-47 |
| Msa1295650 | Msa1430950 | 0.844517 | 7.200246e-59 | -8.615850e-47 |
| Msa1301280 | Msa1430950 | -0.832811 | 7.637673e-56 | -8.615850e-47 |
| Msa1320160 | Msa1430950 | 0.804213 | 2.406554e-49 | -8.615850e-47 |
| Msa1322960 | Msa1430950 | 0.803114 | 4.068714e-49 | -8.615850e-47 |
| Msa1323070 | Msa1430950 | 0.826114 | 3.239554e-54 | -8.615850e-47 |
| Msa1328430 | Msa1430950 | 0.800378 | 1.482408e-48 | -8.615850e-47 |
| Msa1328680 | Msa1430950 | -0.800425 | 1.449730e-48 | -8.615850e-47 |
| Msa1331570 | Msa1430950 | -0.822327 | 2.513991e-53 | -8.615850e-47 |
| Msa1343600 | Msa1430950 | 0.820212 | 7.728616e-53 | -8.615850e-47 |
| Msa0364900 | Msa1430950 | 0.846739 | 1.797902e-59 | -8.615850e-47 |
| Msa0383480 | Msa1430950 | 0.801894 | 7.258122e-49 | -8.615850e-47 |
| Msa0402070 | Msa1430950 | -0.800258 | 1.567956e-48 | -8.615850e-47 |
| Msa0412560 | Msa1430950 | 0.821209 | 4.559029e-53 | -8.615850e-47 |
| Msa0418230 | Msa1430950 | 0.827390 | 1.606182e-54 | -8.615850e-47 |
| Msa0433650 | Msa1430950 | 0.806221 | 9.141434e-50 | -8.615850e-47 |
| Msa0437440 | Msa1430950 | -0.810309 | 1.229201e-50 | -8.615850e-47 |
| Msa0444770 | Msa1430950 | -0.805342 | 1.398389e-49 | -8.615850e-47 |
| Msa0449500 | Msa1430950 | 0.804059 | 2.589996e-49 | -8.615850e-47 |
| Msa0457060 | Msa1430950 | 0.837813 | 4.164236e-57 | -8.615850e-47 |
| Msa0459930 | Msa1430950 | 0.804150 | 2.479880e-49 | -8.615850e-47 |
| Msa0464620 | Msa1430950 | 0.836349 | 9.857182e-57 | -8.615850e-47 |
| Msa0480900 | Msa1430950 | -0.825225 | 5.263908e-54 | -8.615850e-47 |
| Msa1001930 | Msa1430950 | -0.812433 | 4.251025e-51 | -8.615850e-47 |
| Msa1019420 | Msa1430950 | 0.831399 | 1.706900e-55 | -8.615850e-47 |
| Msa1029860 | Msa1430950 | 0.820289 | 7.418559e-53 | -8.615850e-47 |
| Msa1034950 | Msa1430950 | 0.817683 | 2.904131e-52 | -8.615850e-47 |
| Msa1035050 | Msa1430950 | 0.802231 | 6.188863e-49 | -8.615850e-47 |
| Msa1075010 | Msa1430950 | 0.817150 | 3.827463e-52 | -8.615850e-47 |
| Msa1075090 | Msa1430950 | 0.804747 | 1.862096e-49 | -8.615850e-47 |
| Msa1080130 | Msa1430950 | 0.804742 | 1.867087e-49 | -8.615850e-47 |
| Msa1087210 | Msa1430950 | 0.825214 | 5.296158e-54 | -8.615850e-47 |
| Msa1092310 | Msa1430950 | 0.841597 | 4.314479e-58 | -8.615850e-47 |
| Msa1094810 | Msa1430950 | 0.829965 | 3.830849e-55 | -8.615850e-47 |
| Msa1103450 | Msa1430950 | 0.808870 | 2.504213e-50 | -8.615850e-47 |
| Msa0247780 | Msa1430950 | 0.850232 | 1.939915e-60 | -8.615850e-47 |
| Msa0256920 | Msa1430950 | 0.818709 | 1.701056e-52 | -8.615850e-47 |
| Msa0258260 | Msa1430950 | 0.823622 | 1.254117e-53 | -8.615850e-47 |
| Msa0273400 | Msa1430950 | 0.812032 | 5.198500e-51 | -8.615850e-47 |
| Msa0275390 | Msa1430950 | 0.804704 | 1.900634e-49 | -8.615850e-47 |
| Msa0282960 | Msa1430950 | 0.815711 | 8.038323e-52 | -8.615850e-47 |
| Msa0285890 | Msa1430950 | 0.815782 | 7.750437e-52 | -8.615850e-47 |
| Msa0286360 | Msa1430950 | 0.858710 | 6.831854e-63 | -8.615850e-47 |
| Msa0287480 | Msa1430950 | 0.818507 | 1.890545e-52 | -8.615850e-47 |
| Msa0289960 | Msa1430950 | 0.809389 | 1.938320e-50 | -8.615850e-47 |
| Msa0297340 | Msa1430950 | 0.832333 | 1.003852e-55 | -8.615850e-47 |
| Msa0300470 | Msa1430950 | 0.809466 | 1.865983e-50 | -8.615850e-47 |
| Msa0307630 | Msa1430950 | 0.822188 | 2.706974e-53 | -8.615850e-47 |
| Msa0307740 | Msa1430950 | 0.992723 | 4.929436e-195 | -8.615850e-47 |
| Msa0314240 | Msa1430950 | 0.815447 | 9.202438e-52 | -8.615850e-47 |
| Msa0320170 | Msa1430950 | 0.825536 | 4.443392e-54 | -8.615850e-47 |
| Msa0325260 | Msa1430950 | 0.846778 | 1.753417e-59 | -8.615850e-47 |
| Msa0333770 | Msa1430950 | 0.815720 | 8.000775e-52 | -8.615850e-47 |
| Msa0337970 | Msa1430950 | 0.810742 | 9.907923e-51 | -8.615850e-47 |
| Msa0343210 | Msa1430950 | 0.816896 | 4.365361e-52 | -8.615850e-47 |
| Msa0356270 | Msa1430950 | 0.816718 | 4.786025e-52 | -8.615850e-47 |
| Msa0357470 | Msa1430950 | 0.801438 | 9.002605e-49 | -8.615850e-47 |
| Msa0357510 | Msa1430950 | 0.810994 | 8.738341e-51 | -8.615850e-47 |
| Msa0357530 | Msa1430950 | 0.804662 | 1.940277e-49 | -8.615850e-47 |
| Msa1107220 | Msa1430950 | 0.824332 | 8.546743e-54 | -8.615850e-47 |
| Msa1111910 | Msa1430950 | 0.810443 | 1.149535e-50 | -8.615850e-47 |
| Msa1128520 | Msa1430950 | -0.804165 | 2.462678e-49 | -8.615850e-47 |
| Msa1129120 | Msa1430950 | -0.809582 | 1.762419e-50 | -8.615850e-47 |
| Msa1131270 | Msa1430950 | 0.837188 | 6.023849e-57 | -8.615850e-47 |
| Msa1132880 | Msa1430950 | -0.807669 | 4.514427e-50 | -8.615850e-47 |
| Msa1133750 | Msa1430950 | 0.817311 | 3.522553e-52 | -8.615850e-47 |
| Msa1137750 | Msa1430950 | 0.801965 | 7.020210e-49 | -8.615850e-47 |
| Msa1140930 | Msa1430950 | 0.817868 | 2.637867e-52 | -8.615850e-47 |
| Msa1147010 | Msa1430950 | 0.800280 | 1.552124e-48 | -8.615850e-47 |
| Msa1150760 | Msa1430950 | 0.809456 | 1.875748e-50 | -8.615850e-47 |
| Msa1154060 | Msa1430950 | 0.836652 | 8.253558e-57 | -8.615850e-47 |
| Msa1154320 | Msa1430950 | 0.833053 | 6.649912e-56 | -8.615850e-47 |
| Msa1162430 | Msa1430950 | 0.807624 | 4.615869e-50 | -8.615850e-47 |
| Msa1167310 | Msa1430950 | 0.827171 | 1.812348e-54 | -8.615850e-47 |
| Msa1191270 | Msa1430950 | 0.806096 | 9.711480e-50 | -8.615850e-47 |
| Msa1193940 | Msa1430950 | 0.837093 | 6.369096e-57 | -8.615850e-47 |
| Msa1199540 | Msa1430950 | -0.804720 | 1.886688e-49 | -8.615850e-47 |
| Msa1202110 | Msa1430950 | 0.800102 | 1.687259e-48 | -8.615850e-47 |
| Msa1202800 | Msa1430950 | 0.845831 | 3.177220e-59 | -8.615850e-47 |
| Msa1203440 | Msa1430950 | 0.846072 | 2.732803e-59 | -8.615850e-47 |
| Msa1203650 | Msa1430950 | 0.832082 | 1.157704e-55 | -8.615850e-47 |
| Msa1211940 | Msa1430950 | 0.891082 | 5.493067e-74 | -8.615850e-47 |
| Msa1212080 | Msa1430950 | 0.881832 | 1.729427e-70 | -8.615850e-47 |
| Msa1221270 | Msa1430950 | 0.833061 | 6.620433e-56 | -8.615850e-47 |
| Msa1223710 | Msa1430950 | 0.822532 | 2.252744e-53 | -8.615850e-47 |
| Msa1223960 | Msa1430950 | 0.800693 | 1.278454e-48 | -8.615850e-47 |
| Msa0490100 | Msa1430950 | 0.819494 | 1.127590e-52 | -8.615850e-47 |
| Msa0492330 | Msa1430950 | -0.802646 | 5.082092e-49 | -8.615850e-47 |
| Msa0497680 | Msa1430950 | 0.804427 | 2.171134e-49 | -8.615850e-47 |
| Msa0510050 | Msa1430950 | 0.817224 | 3.684390e-52 | -8.615850e-47 |
| Msa0521550 | Msa1430950 | 0.809242 | 2.084410e-50 | -8.615850e-47 |
| Msa0525180 | Msa1430950 | -0.807985 | 3.868463e-50 | -8.615850e-47 |
| Msa0531050 | Msa1430950 | 0.811717 | 6.088468e-51 | -8.615850e-47 |
| Msa0547370 | Msa1430950 | 0.812261 | 4.635062e-51 | -8.615850e-47 |
| Msa0548420 | Msa1430950 | 0.811165 | 8.025556e-51 | -8.615850e-47 |
| Msa0557240 | Msa1430950 | 0.810176 | 1.312844e-50 | -8.615850e-47 |
| Msa0560060 | Msa1430950 | 0.849413 | 3.285881e-60 | -8.615850e-47 |
| Msa0561830 | Msa1430950 | 0.801680 | 8.033671e-49 | -8.615850e-47 |
| Msa0565700 | Msa1430950 | 0.809286 | 2.039845e-50 | -8.615850e-47 |
| Msa0566280 | Msa1430950 | 0.824918 | 6.222205e-54 | -8.615850e-47 |
| Msa0566490 | Msa1430950 | 0.829752 | 4.317435e-55 | -8.615850e-47 |
| Msa0567330 | Msa1430950 | 0.826488 | 2.639637e-54 | -8.615850e-47 |
| Msa0567570 | Msa1430950 | 0.811606 | 6.436666e-51 | -8.615850e-47 |
| Msa0576320 | Msa1430950 | 0.810569 | 1.080041e-50 | -8.615850e-47 |
| Msa0580410 | Msa1430950 | -0.807932 | 3.969653e-50 | -8.615850e-47 |
| Msa0580890 | Msa1430950 | -0.804123 | 2.512190e-49 | -8.615850e-47 |
| Msa0581350 | Msa1430950 | 0.815196 | 1.046573e-51 | -8.615850e-47 |
| Msa0588040 | Msa1430950 | 0.841524 | 4.509210e-58 | -8.615850e-47 |
| Msa0590620 | Msa1430950 | -0.823586 | 1.279220e-53 | -8.615850e-47 |
| Msa0598310 | Msa1430950 | 0.812969 | 3.243446e-51 | -8.615850e-47 |
| Msa0602100 | Msa1430950 | 0.805835 | 1.101698e-49 | -8.615850e-47 |
| Msa0850640 | Msa1430950 | 0.941834 | 2.084276e-101 | -8.615850e-47 |
| Msa0853080 | Msa1430950 | 0.807060 | 6.079106e-50 | -8.615850e-47 |
| Msa0862480 | Msa1430950 | -0.828778 | 7.439948e-55 | -8.615850e-47 |
| Msa0873910 | Msa1430950 | 0.806185 | 9.298713e-50 | -8.615850e-47 |
| Msa0881880 | Msa1430950 | -0.805758 | 1.143898e-49 | -8.615850e-47 |
| Msa0882480 | Msa1430950 | -0.800819 | 1.205124e-48 | -8.615850e-47 |
| Msa0892820 | Msa1430950 | -0.811899 | 5.557863e-51 | -8.615850e-47 |
| Msa0904590 | Msa1430950 | 0.805507 | 1.291160e-49 | -8.615850e-47 |
| Msa0905570 | Msa1430950 | 0.803982 | 2.688129e-49 | -8.615850e-47 |
| Msa0906660 | Msa1430950 | 0.803798 | 2.935195e-49 | -8.615850e-47 |
| Msa0907880 | Msa1430950 | 0.945332 | 3.723612e-104 | -8.615850e-47 |
| Msa0925940 | Msa1430950 | 0.814874 | 1.233336e-51 | -8.615850e-47 |
| Msa0966580 | Msa1430950 | 0.800672 | 1.291464e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430950 | MtrunA17_Chr5g0426511 | 51.351 | 148 | 43 | 7 | 1 | 123 | 1 | 144 | 1.43e-23 | 88.6 |
| Msa1430950 | MtrunA17_Chr2g0279541 | 61.290 | 124 | 15 | 5 | 1 | 123 | 1 | 92 | 4.65e-22 | 83.2 |
| Msa1430950 | MtrunA17_Chr4g0049911 | 46.789 | 109 | 40 | 3 | 1 | 100 | 1 | 100 | 1.66e-15 | 67.8 |
| Msa1430950 | MtrunA17_Chr4g0049921 | 52.885 | 104 | 41 | 3 | 1 | 100 | 1 | 100 | 4.19e-15 | 66.6 |
| Msa1430950 | MtrunA17_Chr4g0049951 | 45.872 | 109 | 41 | 3 | 1 | 100 | 1 | 100 | 8.59e-15 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430950 | AT5G09520.1 | 36.290 | 124 | 65 | 6 | 2 | 112 | 5 | 127 | 1.24e-11 | 58.2 |
Find 40 sgRNAs with CRISPR-Local
Find 43 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGAAGTGTTGGTGTAGT+TGG | 0.341757 | tig0026773:-60888 | Msa1430950:intergenic |
| TTTGGCAATGTTGGGATTGT+AGG | 0.346130 | tig0026773:-60981 | Msa1430950:intergenic |
| ATAGATGGCTGAGTAGGTTT+TGG | 0.351476 | tig0026773:-60999 | Msa1430950:intergenic |
| GGGATTGTAGTAGGAATGTT+TGG | 0.366842 | tig0026773:-61077 | Msa1430950:intergenic |
| GGGAATGTTGGCATAGTGAT+TGG | 0.393983 | tig0026773:-61098 | Msa1430950:intergenic |
| TGAGGCAATGTTGGAATTGT+TGG | 0.400561 | tig0026773:-60939 | Msa1430950:intergenic |
| TGTGGAATAGTTGGAATTGT+AGG | 0.403230 | tig0026773:-61035 | Msa1430950:intergenic |
| TGAAGGTGGTGGAGAAAAGA+AGG | 0.426869 | tig0026773:-61120 | Msa1430950:intergenic |
| AATGTTGGCAATGTTGGTTT+TGG | 0.454379 | tig0026773:-60906 | Msa1430950:intergenic |
| GGGATAGTACTAGGAATAGA+TGG | 0.460146 | tig0026773:-61014 | Msa1430950:intergenic |
| TGCTAAAATGAAGGAACTAT+AGG | 0.465331 | tig0026773:-60793 | Msa1430950:intergenic |
| TGCTATTTCCTTCTCAAACA+TGG | 0.466175 | tig0026773:+60824 | Msa1430950:CDS |
| AAGAAGATTGCGAGCTGCTA+GGG | 0.477055 | tig0026773:-60853 | Msa1430950:intergenic |
| GGTGGCAATGTTGGCAATGT+TGG | 0.477572 | tig0026773:-60912 | Msa1430950:intergenic |
| ACATTTCCTTGAGGCAATGT+TGG | 0.483996 | tig0026773:-60948 | Msa1430950:intergenic |
| GGAATGTTGGCATAGTGATT+GGG | 0.491312 | tig0026773:-61097 | Msa1430950:intergenic |
| ATAGTGATTGGGATTGTAGT+AGG | 0.509782 | tig0026773:-61086 | Msa1430950:intergenic |
| GGAGAAAAGAAGGGGAATGT+TGG | 0.509998 | tig0026773:-61110 | Msa1430950:intergenic |
| AATGAAAATTGCTAAAATGA+AGG | 0.510394 | tig0026773:-60802 | Msa1430950:intergenic |
| AGAGTGAACTGTGGAATAGT+TGG | 0.512404 | tig0026773:-61044 | Msa1430950:intergenic |
| GAAGGTGGTGGAGAAAAGAA+GGG | 0.525536 | tig0026773:-61119 | Msa1430950:intergenic |
| GAAGAAGATTGCGAGCTGCT+AGG | 0.529340 | tig0026773:-60854 | Msa1430950:intergenic |
| GTGGAATAGTTGGAATTGTA+GGG | 0.531662 | tig0026773:-61034 | Msa1430950:intergenic |
| GTTGGAATTGTTGGCAAAGG+TGG | 0.537047 | tig0026773:-60930 | Msa1430950:intergenic |
| CTAGGAATAGATGGCTGAGT+AGG | 0.540861 | tig0026773:-61005 | Msa1430950:intergenic |
| GTAGTAGGAATGTTTGGAAG+TGG | 0.541956 | tig0026773:-61071 | Msa1430950:intergenic |
| GTTGGCAAAGGTGGCAATGT+TGG | 0.545513 | tig0026773:-60921 | Msa1430950:intergenic |
| GGAATTGTAGGGATAGTACT+AGG | 0.546673 | tig0026773:-61023 | Msa1430950:intergenic |
| GTTGGGATTGTAGGCAAAGG+TGG | 0.549782 | tig0026773:-60972 | Msa1430950:intergenic |
| GTAGGAATGTTTGGAAGTGG+TGG | 0.557881 | tig0026773:-61068 | Msa1430950:intergenic |
| GAAGGAACTATAGGAGGCCA+TGG | 0.565486 | tig0026773:-60784 | Msa1430950:intergenic |
| TAAAATGAAGGAACTATAGG+AGG | 0.579978 | tig0026773:-60790 | Msa1430950:intergenic |
| GGTAATGTCCATGTTTGAGA+AGG | 0.594515 | tig0026773:-60832 | Msa1430950:intergenic |
| TTGACACGAACTTCAAGGAG+TGG | 0.601056 | tig0026773:-61147 | Msa1430950:intergenic |
| ACAATTCCAACATTGCCTCA+AGG | 0.633830 | tig0026773:+60942 | Msa1430950:CDS |
| AAGGTGGTGGAGAAAAGAAG+GGG | 0.639486 | tig0026773:-61118 | None:intergenic |
| AATGTTGGAATTGTTGGCAA+AGG | 0.641702 | tig0026773:-60933 | None:intergenic |
| AGTGGTGGAAGAGTGAACTG+TGG | 0.689745 | tig0026773:-61053 | None:intergenic |
| AATGTTGGGATTGTAGGCAA+AGG | 0.702377 | tig0026773:-60975 | None:intergenic |
| AAAGGTGGAACATTTCCTTG+AGG | 0.706888 | tig0026773:-60957 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAATTGCTAAAATGA+AGG | - | tig0026773:60805-60824 | Msa1261620:intergenic | 20.0% |
| TAAAATGAAGGAACTATAGG+AGG | - | tig0026773:60793-60812 | Msa1261620:intergenic | 30.0% | |
| TGCTAAAATGAAGGAACTAT+AGG | - | tig0026773:60796-60815 | Msa1261620:intergenic | 30.0% | |
| !! | TGCTATTTCCTTCTCAAACA+TGG | + | tig0026773:60824-60843 | Msa1430950:CDS | 35.0% |
| !!! | AATGTTGGTTTTGGAAGTGT+TGG | - | tig0026773:60900-60919 | Msa1430950:intergenic | 35.0% |
| !!! | AATGTTGGCAATGTTGGTTT+TGG | - | tig0026773:60909-60928 | Msa1430950:intergenic | 35.0% |
| AATGTTGGAATTGTTGGCAA+AGG | - | tig0026773:60936-60955 | Msa1430950:intergenic | 35.0% | |
| GTGGAATAGTTGGAATTGTA+GGG | - | tig0026773:61037-61056 | Msa1430950:intergenic | 35.0% | |
| TGTGGAATAGTTGGAATTGT+AGG | - | tig0026773:61038-61057 | Msa1430950:intergenic | 35.0% | |
| ATAGTGATTGGGATTGTAGT+AGG | - | tig0026773:61089-61108 | Msa1430950:intergenic | 35.0% | |
| GGTAATGTCCATGTTTGAGA+AGG | - | tig0026773:60835-60854 | Msa1430950:intergenic | 40.0% | |
| !! | TTTGGAAGTGTTGGTGTAGT+TGG | - | tig0026773:60891-60910 | Msa1430950:intergenic | 40.0% |
| TGAGGCAATGTTGGAATTGT+TGG | - | tig0026773:60942-60961 | Msa1430950:intergenic | 40.0% | |
| ACAATTCCAACATTGCCTCA+AGG | + | tig0026773:60942-60961 | Msa1430950:CDS | 40.0% | |
| ACATTTCCTTGAGGCAATGT+TGG | - | tig0026773:60951-60970 | Msa1430950:intergenic | 40.0% | |
| AAAGGTGGAACATTTCCTTG+AGG | - | tig0026773:60960-60979 | Msa1430950:intergenic | 40.0% | |
| AATGTTGGGATTGTAGGCAA+AGG | - | tig0026773:60978-60997 | Msa1430950:intergenic | 40.0% | |
| TTTGGCAATGTTGGGATTGT+AGG | - | tig0026773:60984-61003 | Msa1430950:intergenic | 40.0% | |
| !! | GAGTAGGTTTTGGCAATGTT+GGG | - | tig0026773:60992-61011 | Msa1430950:intergenic | 40.0% |
| !! | TGAGTAGGTTTTGGCAATGT+TGG | - | tig0026773:60993-61012 | Msa1430950:intergenic | 40.0% |
| ! | ATAGATGGCTGAGTAGGTTT+TGG | - | tig0026773:61002-61021 | Msa1430950:intergenic | 40.0% |
| GGGATAGTACTAGGAATAGA+TGG | - | tig0026773:61017-61036 | Msa1430950:intergenic | 40.0% | |
| GGAATTGTAGGGATAGTACT+AGG | - | tig0026773:61026-61045 | Msa1430950:intergenic | 40.0% | |
| AGAGTGAACTGTGGAATAGT+TGG | - | tig0026773:61047-61066 | Msa1430950:intergenic | 40.0% | |
| GTAGTAGGAATGTTTGGAAG+TGG | - | tig0026773:61074-61093 | Msa1430950:intergenic | 40.0% | |
| GGGATTGTAGTAGGAATGTT+TGG | - | tig0026773:61080-61099 | Msa1430950:intergenic | 40.0% | |
| GGAATGTTGGCATAGTGATT+GGG | - | tig0026773:61100-61119 | Msa1430950:intergenic | 40.0% | |
| AAGAAGATTGCGAGCTGCTA+GGG | - | tig0026773:60856-60875 | Msa1430950:intergenic | 45.0% | |
| GTTGGAATTGTTGGCAAAGG+TGG | - | tig0026773:60933-60952 | Msa1430950:intergenic | 45.0% | |
| CTAGGAATAGATGGCTGAGT+AGG | - | tig0026773:61008-61027 | Msa1430950:intergenic | 45.0% | |
| GTAGGAATGTTTGGAAGTGG+TGG | - | tig0026773:61071-61090 | Msa1430950:intergenic | 45.0% | |
| GGGAATGTTGGCATAGTGAT+TGG | - | tig0026773:61101-61120 | Msa1430950:intergenic | 45.0% | |
| GGAGAAAAGAAGGGGAATGT+TGG | - | tig0026773:61113-61132 | Msa1430950:intergenic | 45.0% | |
| !! | AAGGTGGTGGAGAAAAGAAG+GGG | - | tig0026773:61121-61140 | Msa1430950:intergenic | 45.0% |
| !! | GAAGGTGGTGGAGAAAAGAA+GGG | - | tig0026773:61122-61141 | Msa1430950:intergenic | 45.0% |
| !! | TGAAGGTGGTGGAGAAAAGA+AGG | - | tig0026773:61123-61142 | Msa1430950:intergenic | 45.0% |
| !! | CAAGGAGTGGTTTTTGAAGG+TGG | - | tig0026773:61137-61156 | Msa1430950:intergenic | 45.0% |
| GAAGAAGATTGCGAGCTGCT+AGG | - | tig0026773:60857-60876 | Msa1430950:intergenic | 50.0% | |
| GGTGGCAATGTTGGCAATGT+TGG | - | tig0026773:60915-60934 | Msa1430950:intergenic | 50.0% | |
| GTTGGCAAAGGTGGCAATGT+TGG | - | tig0026773:60924-60943 | Msa1430950:intergenic | 50.0% | |
| GTTGGGATTGTAGGCAAAGG+TGG | - | tig0026773:60975-60994 | Msa1430950:intergenic | 50.0% | |
| ! | AGTGGTGGAAGAGTGAACTG+TGG | - | tig0026773:61056-61075 | Msa1430950:intergenic | 50.0% |
| !! | GGAGTGGTTTTTGAAGGTGG+TGG | - | tig0026773:61134-61153 | Msa1430950:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026773 | gene | 60786 | 61157 | 60786 | ID=Msa1430950;Name=Msa1430950 |
| tig0026773 | mRNA | 60786 | 61157 | 60786 | ID=Msa1430950-mRNA-1;Parent=Msa1430950;Name=Msa1430950-mRNA-1;_AED=0.00;_eAED=0.14;_QI=0|-1|0|1|-1|1|1|0|123 |
| tig0026773 | exon | 60786 | 61157 | 60786 | ID=Msa1430950-mRNA-1:exon:7298;Parent=Msa1430950-mRNA-1 |
| tig0026773 | CDS | 60786 | 61157 | 60786 | ID=Msa1430950-mRNA-1:cds;Parent=Msa1430950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
