Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525450 | XP_003602055.1 | 98.708 | 542 | 7 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1084 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525450 | sp|Q8H4H5|NRAM5_ORYSJ | 70.825 | 521 | 138 | 4 | 29 | 538 | 21 | 538 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525450 | G7LGK5 | 98.708 | 542 | 7 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1084 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072030 | Msa0525450 | 0.807950 | 3.934157e-50 | -8.615850e-47 |
| Msa0139460 | Msa0525450 | 0.800120 | 1.672484e-48 | -8.615850e-47 |
| Msa0152740 | Msa0525450 | 0.807149 | 5.820508e-50 | -8.615850e-47 |
| Msa0374520 | Msa0525450 | 0.935012 | 1.653568e-96 | -8.615850e-47 |
| Msa0374650 | Msa0525450 | 0.968293 | 1.799726e-128 | -8.615850e-47 |
| Msa0423680 | Msa0525450 | 0.881962 | 1.551890e-70 | -8.615850e-47 |
| Msa0470370 | Msa0525450 | 0.893912 | 4.037642e-75 | -8.615850e-47 |
| Msa0269720 | Msa0525450 | 0.813212 | 2.869191e-51 | -8.615850e-47 |
| Msa0291750 | Msa0525450 | 0.834371 | 3.114762e-56 | -8.615850e-47 |
| Msa0525450 | Msa0543740 | 0.818549 | 1.849735e-52 | -8.615850e-47 |
| Msa0525450 | Msa0591490 | 0.803748 | 3.005934e-49 | -8.615850e-47 |
| Msa0525450 | Msa0640290 | 0.805882 | 1.077244e-49 | -8.615850e-47 |
| Msa0525450 | Msa0643840 | 0.804682 | 1.921418e-49 | -8.615850e-47 |
| Msa0525450 | Msa0670360 | 0.805465 | 1.317471e-49 | -8.615850e-47 |
| Msa0525450 | Msa0735280 | 0.810657 | 1.033538e-50 | -8.615850e-47 |
| Msa0525450 | Msa0768720 | 0.802046 | 6.755239e-49 | -8.615850e-47 |
| Msa0525450 | Msa0814230 | 0.806851 | 6.729827e-50 | -8.615850e-47 |
| Msa0525450 | Msa0883640 | 0.807833 | 4.166338e-50 | -8.615850e-47 |
| Msa0525450 | Msa0910830 | 0.815733 | 7.947565e-52 | -8.615850e-47 |
| Msa0525450 | Msa0913550 | 0.804304 | 2.303377e-49 | -8.615850e-47 |
| Msa0525450 | Msa0960090 | 0.809259 | 2.067290e-50 | -8.615850e-47 |
| Msa0525450 | Msa0985700 | 0.809269 | 2.057172e-50 | -8.615850e-47 |
| Msa0525450 | Msa1037350 | 0.804558 | 2.038996e-49 | -8.615850e-47 |
| Msa0525450 | Msa1061670 | 0.807513 | 4.872510e-50 | -8.615850e-47 |
| Msa0525450 | Msa1106680 | 0.800068 | 1.714117e-48 | -8.615850e-47 |
| Msa0525450 | Msa1106960 | 0.808966 | 2.387961e-50 | -8.615850e-47 |
| Msa0525450 | Msa1109890 | 0.804183 | 2.440784e-49 | -8.615850e-47 |
| Msa0525450 | Msa1123010 | 0.807743 | 4.353924e-50 | -8.615850e-47 |
| Msa0525450 | Msa1164240 | 0.809356 | 1.970640e-50 | -8.615850e-47 |
| Msa0525450 | Msa1262810 | 0.808479 | 3.034753e-50 | -8.615850e-47 |
| Msa0525450 | Msa1269050 | 0.819906 | 9.079550e-53 | -8.615850e-47 |
| Msa0525450 | Msa1319290 | 0.808317 | 3.285964e-50 | -8.615850e-47 |
| Msa0525450 | Msa1413090 | 0.834876 | 2.325702e-56 | -8.615850e-47 |
| Msa0525450 | Msa1445900 | 0.809448 | 1.882702e-50 | -8.615850e-47 |
| Msa0525450 | Msa1459610 | 0.819962 | 8.817947e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525450 | MtrunA17_Chr3g0124971 | 98.708 | 542 | 7 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1084 |
| Msa0525450 | MtrunA17_Chr3g0124991 | 81.800 | 511 | 89 | 1 | 28 | 538 | 25 | 531 | 0.0 | 862 |
| Msa0525450 | MtrunA17_Chr2g0333811 | 58.674 | 513 | 202 | 3 | 31 | 538 | 30 | 537 | 0.0 | 616 |
| Msa0525450 | MtrunA17_Chr3g0134491 | 41.632 | 478 | 243 | 9 | 18 | 487 | 55 | 504 | 3.32e-110 | 338 |
| Msa0525450 | MtrunA17_Chr4g0053701 | 39.804 | 510 | 266 | 10 | 10 | 506 | 29 | 510 | 5.89e-107 | 330 |
| Msa0525450 | MtrunA17_Chr5g0401611 | 40.041 | 487 | 265 | 9 | 10 | 487 | 22 | 490 | 4.22e-106 | 327 |
| Msa0525450 | MtrunA17_Chr8g0347551 | 40.132 | 456 | 247 | 8 | 41 | 487 | 83 | 521 | 1.48e-98 | 309 |
| Msa0525450 | MtrunA17_Chr7g0264231 | 27.700 | 426 | 250 | 10 | 43 | 448 | 31 | 418 | 6.72e-36 | 143 |
| Msa0525450 | MtrunA17_Chr2g0309271 | 27.882 | 373 | 245 | 10 | 89 | 454 | 6 | 361 | 3.58e-34 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0525450 | AT1G15960.1 | 57.649 | 536 | 204 | 4 | 5 | 538 | 4 | 518 | 0.0 | 617 |
| Msa0525450 | AT1G80830.1 | 59.960 | 502 | 198 | 2 | 18 | 516 | 18 | 519 | 0.0 | 611 |
| Msa0525450 | AT1G80830.2 | 59.960 | 502 | 198 | 2 | 18 | 516 | 18 | 519 | 0.0 | 611 |
| Msa0525450 | AT1G47240.1 | 40.323 | 496 | 263 | 10 | 2 | 487 | 31 | 503 | 1.04e-110 | 340 |
| Msa0525450 | AT5G67330.1 | 42.731 | 454 | 242 | 7 | 38 | 483 | 46 | 489 | 7.50e-109 | 335 |
| Msa0525450 | AT2G23150.1 | 42.237 | 438 | 225 | 7 | 23 | 452 | 47 | 464 | 1.17e-105 | 326 |
| Msa0525450 | AT4G18790.1 | 39.917 | 481 | 255 | 11 | 24 | 487 | 42 | 505 | 6.24e-98 | 307 |
| Msa0525450 | AT5G03280.1 | 28.297 | 417 | 266 | 9 | 50 | 454 | 24 | 419 | 2.29e-38 | 151 |
Find 142 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACGTGGGTTTGCATTGC+TGG | 0.156547 | 3_4:+78960445 | None:intergenic |
| TCTATCATTGGTGGTTCTTC+TGG | 0.194282 | 3_4:-78961010 | Msa0525450:CDS |
| ATAGAGAAAATTACTATTTC+CGG | 0.208449 | 3_4:+78965718 | None:intergenic |
| GTTGTTGCTATAGGGTTTCT+TGG | 0.220130 | 3_4:-78961104 | Msa0525450:intron |
| TGCAAAGCTGATGATATTTC+TGG | 0.243526 | 3_4:-78961488 | Msa0525450:CDS |
| TTGCTGTGGATCATACTTAT+TGG | 0.253071 | 3_4:-78965228 | Msa0525450:CDS |
| AGGCGATGCTATTGCCCTTT+TGG | 0.259932 | 3_4:-78961968 | Msa0525450:CDS |
| AGCACCATTTCCGCTGAGTT+TGG | 0.266992 | 3_4:+78961993 | None:intergenic |
| CATTATCATCTCATGGATAC+TGG | 0.284916 | 3_4:-78960668 | Msa0525450:CDS |
| GCTCATTGTGTTTCCTCTAA+TGG | 0.296660 | 3_4:-78960545 | Msa0525450:CDS |
| GCCGTTAATGTGACCCCTTC+TGG | 0.300443 | 3_4:-78966014 | Msa0525450:CDS |
| GGTTTGTGAAATACTGCTTA+TGG | 0.301334 | 3_4:-78964656 | Msa0525450:CDS |
| CTCTGCTTCTTTCCTTCTCC+AGG | 0.303394 | 3_4:-78961429 | Msa0525450:intron |
| GAGGAATCATCATGGTTATA+AGG | 0.307736 | 3_4:+78965984 | None:intergenic |
| CATCTCATGGATACTGGGTT+TGG | 0.307770 | 3_4:-78960662 | Msa0525450:CDS |
| TGGGGAGGGGTTCTGTTGAC+TGG | 0.325047 | 3_4:-78963815 | Msa0525450:CDS |
| GTAATGGCTGCATGTTTCTT+TGG | 0.335836 | 3_4:-78962072 | Msa0525450:CDS |
| CAATCATTGGCTGCAAATCT+TGG | 0.340580 | 3_4:-78965183 | Msa0525450:CDS |
| AAATAACCTGCATGATAAAC+TGG | 0.343150 | 3_4:+78961209 | None:intergenic |
| TCAGCTAAATCTTCTCTATA+AGG | 0.348732 | 3_4:+78960379 | None:intergenic |
| TGCCTGCATAATTCAATCAT+TGG | 0.362553 | 3_4:-78965196 | Msa0525450:CDS |
| CCCTCAATTACTCCTTTAGC+AGG | 0.370812 | 3_4:+78962027 | None:intergenic |
| GAAGGAAAGAAGCAGAGTTA+AGG | 0.373155 | 3_4:+78961435 | None:intergenic |
| TAGAGAAAATTACTATTTCC+GGG | 0.385584 | 3_4:+78965719 | None:intergenic |
| AAGGAAAGAAGCAGAGTTAA+GGG | 0.387403 | 3_4:+78961436 | None:intergenic |
| GTTCCCAAACTCAGCGGAAA+TGG | 0.392437 | 3_4:-78961997 | Msa0525450:CDS |
| TCACATTAACGGCTACTATA+CGG | 0.394700 | 3_4:+78966024 | None:intergenic |
| CCACGTGGGTTTGCATTGCT+GGG | 0.394721 | 3_4:+78960446 | None:intergenic |
| ATGAACACATTTGCCACCTT+TGG | 0.395316 | 3_4:+78960571 | None:intergenic |
| TACTATTCCACATCCCTGTA+TGG | 0.395695 | 3_4:-78963835 | Msa0525450:CDS |
| ACGATATACAGTGCCATTAG+AGG | 0.404675 | 3_4:+78960532 | None:intergenic |
| AATGCAAACCCACGTGGAAA+AGG | 0.405954 | 3_4:-78960440 | Msa0525450:CDS |
| GCACCATTTCCGCTGAGTTT+GGG | 0.410514 | 3_4:+78961994 | None:intergenic |
| ATGCAAACCCACGTGGAAAA+GGG | 0.414972 | 3_4:-78960439 | Msa0525450:CDS |
| AATATATATACGGCATGATA+AGG | 0.422603 | 3_4:+78961941 | None:intergenic |
| TTCAATTCTAGTATTTGTAA+TGG | 0.429820 | 3_4:-78962088 | Msa0525450:CDS |
| GCACATCAAGAAGTGAATAA+TGG | 0.430235 | 3_4:-78966056 | Msa0525450:CDS |
| ATCTCATGGATACTGGGTTT+GGG | 0.430375 | 3_4:-78960661 | Msa0525450:CDS |
| TTCTTGGCATATGTAGGTCC+TGG | 0.432693 | 3_4:-78965770 | Msa0525450:CDS |
| CTCAATTACTCCTTTAGCAG+GGG | 0.433628 | 3_4:+78962029 | None:intergenic |
| ATACTGGGTTTGGGAATCAT+TGG | 0.437838 | 3_4:-78960652 | Msa0525450:CDS |
| AACAGAACCCCTCCCCATAC+AGG | 0.439502 | 3_4:+78963821 | None:intergenic |
| AATTACTATTTCCGGGATCA+AGG | 0.443260 | 3_4:+78965726 | None:intergenic |
| TCCTGCTGCTGCTAAACTTA+AGG | 0.444508 | 3_4:+78960821 | None:intergenic |
| TAGTACCTGATCTTGCTTTG+AGG | 0.445138 | 3_4:+78965965 | None:intergenic |
| GCCAAGAACTTCTTCCATCC+TGG | 0.450214 | 3_4:+78965785 | None:intergenic |
| ATTGGTGGTTCTTCTGGAGC+TGG | 0.453884 | 3_4:-78961004 | Msa0525450:CDS |
| TGTAACGTTTGTGGAGGTTA+AGG | 0.455588 | 3_4:-78960473 | Msa0525450:CDS |
| GCATGATAAGGGCACCCAAA+AGG | 0.457391 | 3_4:+78961953 | None:intergenic |
| ACCAGGATGGAAGAAGTTCT+TGG | 0.460018 | 3_4:-78965786 | Msa0525450:CDS |
| AGTCTAGTTGTATCTATCAT+TGG | 0.463106 | 3_4:-78961022 | Msa0525450:CDS |
| GCCAGAAGGGGTCACATTAA+CGG | 0.463878 | 3_4:+78966013 | None:intergenic |
| GCCATCACTGGAACCTATGC+AGG | 0.467177 | 3_4:-78961232 | Msa0525450:CDS |
| TCCTTAAGTTTAGCAGCAGC+AGG | 0.474703 | 3_4:-78960822 | Msa0525450:CDS |
| AGACACTGTTGTAACGTTTG+TGG | 0.479496 | 3_4:-78960482 | Msa0525450:CDS |
| ATATATATACGGCATGATAA+GGG | 0.481081 | 3_4:+78961942 | None:intergenic |
| AGGTGGCAAATGTGTTCATC+GGG | 0.481596 | 3_4:-78960567 | Msa0525450:CDS |
| TCCACATCCCTGTATGGGGA+GGG | 0.483367 | 3_4:-78963829 | Msa0525450:CDS |
| GGACAAAGTTCTGCCATCAC+TGG | 0.489514 | 3_4:-78961244 | Msa0525450:CDS |
| CATGATAAGGGCACCCAAAA+GGG | 0.490780 | 3_4:+78961954 | None:intergenic |
| AGCCAATGATTGAATTATGC+AGG | 0.491531 | 3_4:+78965194 | None:intergenic |
| AATTGATCGTGGCAGTGATT+GGG | 0.494980 | 3_4:-78963877 | Msa0525450:intron |
| TGCAGGCCAGTTTATCATGC+AGG | 0.497043 | 3_4:-78961215 | Msa0525450:intron |
| CCACATCCCTGTATGGGGAG+GGG | 0.502179 | 3_4:-78963828 | Msa0525450:CDS |
| GATGTCGATTAGAATGTGTT+GGG | 0.506492 | 3_4:-78961310 | Msa0525450:intron |
| GGGGAGGGGTTCTGTTGACT+GGG | 0.512702 | 3_4:-78963814 | Msa0525450:CDS |
| TCACTCGACCAGAGGGACTT+AGG | 0.513221 | 3_4:-78960354 | Msa0525450:CDS |
| GCCATAGCATTGCTAGCCTC+AGG | 0.513448 | 3_4:-78961265 | Msa0525450:CDS |
| TGGAGCTAACCACGGATATG+AGG | 0.513573 | 3_4:-78965373 | Msa0525450:intron |
| CAGCTTTACAAATTTCTGAA+AGG | 0.514902 | 3_4:+78964688 | None:intergenic |
| ATTCTTGTGAGGTCCCATCT+TGG | 0.520680 | 3_4:+78960798 | None:intergenic |
| TACAACTAGACTTGGTGCTA+TGG | 0.521234 | 3_4:+78961033 | None:intergenic |
| TATAAGGAGGTGTGCCAGAA+GGG | 0.523324 | 3_4:+78966000 | None:intergenic |
| GGATAAGGAACTTGGTGACT+AGG | 0.528011 | 3_4:-78961063 | Msa0525450:CDS |
| CTAGTTGTATCTATCATTGG+TGG | 0.528310 | 3_4:-78961019 | Msa0525450:CDS |
| TGCAGATCATTATCATCTCA+TGG | 0.528542 | 3_4:-78960675 | Msa0525450:intron |
| TGATTCCTCAAAGCAAGATC+AGG | 0.528741 | 3_4:-78965970 | Msa0525450:intron |
| ATTATCATCTCATGGATACT+GGG | 0.533025 | 3_4:-78960667 | Msa0525450:CDS |
| GTGGAAACTGATTTGCAAGC+TGG | 0.533541 | 3_4:-78965393 | Msa0525450:CDS |
| GATGATACAGGTGAGGAAGT+TGG | 0.533925 | 3_4:-78962121 | Msa0525450:intron |
| AAGGTGGCAAATGTGTTCAT+CGG | 0.535021 | 3_4:-78960568 | Msa0525450:CDS |
| CCTGCTAAAGGAGTAATTGA+GGG | 0.537944 | 3_4:-78962027 | Msa0525450:CDS |
| TAGCAGCAGCAGGACCAAGA+TGG | 0.540609 | 3_4:-78960812 | Msa0525450:CDS |
| GCAAATCTTGGAGTGTGCAC+TGG | 0.541003 | 3_4:-78965171 | Msa0525450:intron |
| TCCTTGGCCTACCTTGATCC+CGG | 0.541201 | 3_4:-78965737 | Msa0525450:CDS |
| ACTATTCCACATCCCTGTAT+GGG | 0.541340 | 3_4:-78963834 | Msa0525450:CDS |
| TTTGTAAAGCTGAGTACCCA+TGG | 0.542389 | 3_4:-78964677 | Msa0525450:CDS |
| TCCTGAGGCTAGCAATGCTA+TGG | 0.543434 | 3_4:+78961264 | None:intergenic |
| TCAATTACTCCTTTAGCAGG+GGG | 0.546528 | 3_4:+78962030 | None:intergenic |
| TGATGTCGATTAGAATGTGT+TGG | 0.550289 | 3_4:-78961311 | Msa0525450:intron |
| CCTCAATTACTCCTTTAGCA+GGG | 0.550345 | 3_4:+78962028 | None:intergenic |
| CATGATAAACTGGCCTGCAT+AGG | 0.550503 | 3_4:+78961219 | None:intergenic |
| CCCCTCCCCATACAGGGATG+TGG | 0.550519 | 3_4:+78963828 | None:intergenic |
| AAGACTCATTATCATTGCAT+CGG | 0.550734 | 3_4:-78960981 | Msa0525450:intron |
| AGGAGTGGAATTAAAGCGAA+TGG | 0.550794 | 3_4:+78960841 | None:intergenic |
| AAGCAGTATTTCACAAACCA+TGG | 0.552975 | 3_4:+78964660 | None:intergenic |
| CTTGCTTTGAGGAATCATCA+TGG | 0.559790 | 3_4:+78965976 | None:intergenic |
| AGCAGCAGCAGGACCAAGAT+GGG | 0.560663 | 3_4:-78960811 | Msa0525450:CDS |
| TCTGATGTATTCAGTTGCTG+TGG | 0.561445 | 3_4:-78965242 | Msa0525450:intron |
| CCCTGCTAAAGGAGTAATTG+AGG | 0.561586 | 3_4:-78962028 | Msa0525450:CDS |
| ACTCACAACCTAAGTCCCTC+TGG | 0.563218 | 3_4:+78960346 | None:intergenic |
| GCCTGCATAGGTTCCAGTGA+TGG | 0.566805 | 3_4:+78961231 | None:intergenic |
| CACTGTTGTAACGTTTGTGG+AGG | 0.573180 | 3_4:-78960479 | Msa0525450:CDS |
| CTCAGCGGAAATGGTGCTGT+AGG | 0.574279 | 3_4:-78961988 | Msa0525450:CDS |
| TGCAAACCCACGTGGAAAAG+GGG | 0.579067 | 3_4:-78960438 | Msa0525450:CDS |
| TTCCACATCCCTGTATGGGG+AGG | 0.579702 | 3_4:-78963830 | Msa0525450:CDS |
| TCCGGGATCAAGGTAGGCCA+AGG | 0.580113 | 3_4:+78965736 | None:intergenic |
| TTGATGCCACGCTTAGTACC+AGG | 0.584278 | 3_4:+78961725 | None:intergenic |
| ACTATTTCCGGGATCAAGGT+AGG | 0.587421 | 3_4:+78965730 | None:intergenic |
| AACCCACAAAAGCAGTAATG+AGG | 0.591854 | 3_4:+78960614 | None:intergenic |
| AGATACTTTCTCATTGAGAG+TGG | 0.591903 | 3_4:-78961572 | Msa0525450:CDS |
| GTTGCAATGATTTCTGTGAC+TGG | 0.594533 | 3_4:-78961518 | Msa0525450:CDS |
| CATTGATGAAAACAGAAACC+AGG | 0.596835 | 3_4:-78965803 | Msa0525450:intron |
| TTATAAGGAGGTGTGCCAGA+AGG | 0.602066 | 3_4:+78965999 | None:intergenic |
| GAATAGTATGTTTAGTGCAA+AGG | 0.605048 | 3_4:+78963850 | None:intergenic |
| ATGATAGATACAACTAGACT+TGG | 0.605967 | 3_4:+78961025 | None:intergenic |
| GAGATAGCACTAGAGCAGAA+TGG | 0.606849 | 3_4:+78961756 | None:intergenic |
| TCATAACAGTCTACCAAAGG+TGG | 0.609151 | 3_4:-78960584 | Msa0525450:CDS |
| TTTGGGTCTACAAAGATTTG+GGG | 0.611662 | 3_4:-78963774 | Msa0525450:intron |
| GCCAAGGAGACAAGAAAACC+AGG | 0.612129 | 3_4:+78965752 | None:intergenic |
| AAGAAGTTCTTGGCATATGT+AGG | 0.614916 | 3_4:-78965776 | Msa0525450:CDS |
| ACAGAACCCCTCCCCATACA+GGG | 0.617014 | 3_4:+78963822 | None:intergenic |
| AGCTGATATCACTCGACCAG+AGG | 0.619373 | 3_4:-78960362 | Msa0525450:CDS |
| CTATTCCACATCCCTGTATG+GGG | 0.625216 | 3_4:-78963833 | Msa0525450:CDS |
| ATAAGGAGGTGTGCCAGAAG+GGG | 0.630304 | 3_4:+78966001 | None:intergenic |
| AAAATACCTGGTACTAAGCG+TGG | 0.631107 | 3_4:-78961731 | Msa0525450:CDS |
| AGCAGTATTTCACAAACCAT+GGG | 0.631884 | 3_4:+78964661 | None:intergenic |
| GCTGATATCACTCGACCAGA+GGG | 0.633224 | 3_4:-78960361 | Msa0525450:CDS |
| CTGCTGCTAAACTTAAGGAG+TGG | 0.639448 | 3_4:+78960826 | None:intergenic |
| ACTAAATTAGAACCTGGAGA+AGG | 0.648262 | 3_4:+78961417 | None:intergenic |
| AATTCATAACAGTCTACCAA+AGG | 0.650188 | 3_4:-78960587 | Msa0525450:CDS |
| ATAGCTGCAGACATACCTGA+AGG | 0.662081 | 3_4:-78964612 | Msa0525450:intron |
| GATGAAAACAGAAACCAGGA+TGG | 0.662101 | 3_4:-78965799 | Msa0525450:intron |
| GATCGTGGCAGTGATTGGGA+CGG | 0.663462 | 3_4:-78963873 | Msa0525450:intron |
| GATGGCAGAACTTTGTCCTG+AGG | 0.667648 | 3_4:+78961249 | None:intergenic |
| GAATCATCATGGTTATAAGG+AGG | 0.667714 | 3_4:+78965987 | None:intergenic |
| CCCAGCAATGCAAACCCACG+TGG | 0.668954 | 3_4:-78960446 | Msa0525450:CDS |
| ACAATGATAGAATTCTTGTG+AGG | 0.669610 | 3_4:+78960787 | None:intergenic |
| GAAAAGGGGTTCGTAAACGA+TGG | 0.672922 | 3_4:-78960424 | Msa0525450:CDS |
| ATGTTTGTTCCCAAACTCAG+CGG | 0.678012 | 3_4:-78962003 | Msa0525450:CDS |
| ATAGCACTAGAGCAGAATGG+AGG | 0.685112 | 3_4:+78961759 | None:intergenic |
| TTGCAAGCTGGAGCTAACCA+CGG | 0.687380 | 3_4:-78965381 | Msa0525450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATATATATTTAATTA+AGG | + | chr3_4:78962999-78963018 | None:intergenic | 0.0% |
| !!! | CAATTATTATTATTTTTCAA+TGG | + | chr3_4:78961133-78961152 | None:intergenic | 10.0% |
| !! | AGTTAATCAAATAATAATAT+TGG | - | chr3_4:78961494-78961513 | Msa0525450:CDS | 10.0% |
| !!! | TCAAACTATAAATTATATTT+TGG | - | chr3_4:78963672-78963691 | Msa0525450:intron | 10.0% |
| !!! | TATTATATTTTAACAATCAA+TGG | - | chr3_4:78963714-78963733 | Msa0525450:intron | 10.0% |
| !!! | TTAAAGTCTACTTTTTTTTT+TGG | - | chr3_4:78960511-78960530 | Msa0525450:CDS | 15.0% |
| !! | TATATGAATATACTATGATA+TGG | + | chr3_4:78961453-78961472 | None:intergenic | 15.0% |
| !! | ATTATTTGATTAACTAACTT+AGG | + | chr3_4:78961489-78961508 | None:intergenic | 15.0% |
| !!! | TTTAATGGTTTTGATTATAA+AGG | + | chr3_4:78961860-78961879 | None:intergenic | 15.0% |
| !! | TATTGATGAGTTAAATTTAA+TGG | + | chr3_4:78961875-78961894 | None:intergenic | 15.0% |
| !!! | TATTGAAATTTAAGTTTGAA+CGG | - | chr3_4:78962180-78962199 | Msa0525450:intron | 15.0% |
| !! | TGTATATATAGAAGATAAAT+AGG | + | chr3_4:78962498-78962517 | None:intergenic | 15.0% |
| !!! | GACAAATTGATAATATAATA+AGG | - | chr3_4:78963039-78963058 | Msa0525450:intron | 15.0% |
| !! | TTGTATATGATCTTATATTT+AGG | - | chr3_4:78963103-78963122 | Msa0525450:intron | 15.0% |
| !! | TGTATATGATCTTATATTTA+GGG | - | chr3_4:78963104-78963123 | Msa0525450:intron | 15.0% |
| !! | AAAAAAAAAGAATGCTTAAA+CGG | + | chr3_4:78963183-78963202 | None:intergenic | 15.0% |
| !! | AATATGTGTATTTATTGTAT+TGG | + | chr3_4:78963347-78963366 | None:intergenic | 15.0% |
| !! | TCATAAAAACATATTTAAAG+AGG | - | chr3_4:78963368-78963387 | Msa0525450:intron | 15.0% |
| !! | CATAAAAACATATTTAAAGA+GGG | - | chr3_4:78963369-78963388 | Msa0525450:intron | 15.0% |
| !! | AGACAATAATTAATATGTTT+AGG | + | chr3_4:78963603-78963622 | None:intergenic | 15.0% |
| !! | ATATTGTAATATGTAAAAGT+TGG | - | chr3_4:78963789-78963808 | Msa0525450:CDS | 15.0% |
| !! | TATTGTAATATGTAAAAGTT+GGG | - | chr3_4:78963790-78963809 | Msa0525450:CDS | 15.0% |
| !! | ATTAAAATAGTCAATGTAAT+GGG | + | chr3_4:78964098-78964117 | None:intergenic | 15.0% |
| !! | ATCGAATTTAATGTAAAATT+AGG | + | chr3_4:78964571-78964590 | None:intergenic | 15.0% |
| !! | ATATATTTAATTGATTATGC+AGG | - | chr3_4:78964804-78964823 | Msa0525450:intron | 15.0% |
| !!! | AACTTAAAAGTTTTAGTATA+AGG | - | chr3_4:78965254-78965273 | Msa0525450:intron | 15.0% |
| !!! | AGTAGACTTTAACTTAATTA+GGG | + | chr3_4:78960503-78960522 | None:intergenic | 20.0% |
| !!! | AAGTAGACTTTAACTTAATT+AGG | + | chr3_4:78960504-78960523 | None:intergenic | 20.0% |
| !! | ATAGAGAAAATTACTATTTC+CGG | + | chr3_4:78960692-78960711 | None:intergenic | 20.0% |
| !!! | TTTTTGATTATAATAGTGAC+CGG | + | chr3_4:78960744-78960763 | None:intergenic | 20.0% |
| !! | AATATAAAACCTTACAAAGT+TGG | - | chr3_4:78961416-78961435 | Msa0525450:intron | 20.0% |
| !! | ATATAAAACCTTACAAAGTT+GGG | - | chr3_4:78961417-78961436 | Msa0525450:intron | 20.0% |
| !!! | TTGTGAAAACTATTTTAGAT+AGG | + | chr3_4:78961543-78961562 | None:intergenic | 20.0% |
| !! | GAACAACAAATATCAAATAA+TGG | + | chr3_4:78961680-78961699 | None:intergenic | 20.0% |
| !! | TGATTATAAAGGAAAAAACA+AGG | + | chr3_4:78961849-78961868 | None:intergenic | 20.0% |
| !!! | ATGTATTTTAGTCATTTACA+TGG | - | chr3_4:78962105-78962124 | Msa0525450:CDS | 20.0% |
| !! | TATTAAAATTCAAGCATGAA+TGG | - | chr3_4:78962257-78962276 | Msa0525450:intron | 20.0% |
| !! | TAATGTTATAAAATTGATCG+TGG | - | chr3_4:78962519-78962538 | Msa0525450:intron | 20.0% |
| !! | CAGGTATTAAAAAAAATTGT+TGG | - | chr3_4:78962929-78962948 | Msa0525450:intron | 20.0% |
| !! | TATAAATTACTCCCATAAAA+AGG | - | chr3_4:78963139-78963158 | Msa0525450:intron | 20.0% |
| !! | ATAAATTACTCCCATAAAAA+GGG | - | chr3_4:78963140-78963159 | Msa0525450:intron | 20.0% |
| !!! | TTAAGCATTCTTTTTTTTTG+TGG | - | chr3_4:78963184-78963203 | Msa0525450:intron | 20.0% |
| !!! | ATTGATTTAGAATGCTTAAA+CGG | + | chr3_4:78963285-78963304 | None:intergenic | 20.0% |
| !! | ATTGTAATATGTAAAAGTTG+GGG | - | chr3_4:78963791-78963810 | Msa0525450:CDS | 20.0% |
| !!! | TTTTTTTTTGTCAAGTAACA+TGG | + | chr3_4:78963861-78963880 | None:intergenic | 20.0% |
| !! | ATATTAATGAGCTACATTAA+AGG | + | chr3_4:78964026-78964045 | None:intergenic | 20.0% |
| !! | TTAAAATAGTCAATGTAATG+GGG | + | chr3_4:78964097-78964116 | None:intergenic | 20.0% |
| !! | GATTAAAATAGTCAATGTAA+TGG | + | chr3_4:78964099-78964118 | None:intergenic | 20.0% |
| !! | TTCAATTCTAGTATTTGTAA+TGG | - | chr3_4:78964319-78964338 | Msa0525450:intron | 20.0% |
| !! | TTATTGAAGTAAAAGAAAAG+AGG | + | chr3_4:78964498-78964517 | None:intergenic | 20.0% |
| !! | TATATGAGTTTATTTCACTT+GGG | + | chr3_4:78964715-78964734 | None:intergenic | 20.0% |
| !! | ATATATGAGTTTATTTCACT+TGG | + | chr3_4:78964716-78964735 | None:intergenic | 20.0% |
| ! | TGTACAATATTAGTTCCAAA+CGG | + | chr3_4:78960544-78960563 | None:intergenic | 25.0% |
| ! | TAGAGAAAATTACTATTTCC+GGG | + | chr3_4:78960691-78960710 | None:intergenic | 25.0% |
| ! | GTCATATTATATACACTATC+CGG | - | chr3_4:78960722-78960741 | Msa0525450:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | + | chr3_4:78960817-78960836 | None:intergenic | 25.0% |
| ! | CATTATTTGATATTTGACGT+GGG | - | chr3_4:78961623-78961642 | Msa0525450:intron | 25.0% |
| ! | ATTATTTGATATTTGACGTG+GGG | - | chr3_4:78961624-78961643 | Msa0525450:intron | 25.0% |
| !!! | TTTGTTGTTCAAATTTTGAC+AGG | - | chr3_4:78961690-78961709 | Msa0525450:intron | 25.0% |
| ! | GTGATGTACATGTAAATAAA+TGG | + | chr3_4:78961979-78961998 | None:intergenic | 25.0% |
| !!! | TTGAACGGTTAGTTTTATAT+CGG | - | chr3_4:78962195-78962214 | Msa0525450:intron | 25.0% |
| ! | ACGCATCCATATTAAAATAT+TGG | - | chr3_4:78962345-78962364 | Msa0525450:intron | 25.0% |
| !!! | GGACATCCAATATTTTAATA+TGG | + | chr3_4:78962354-78962373 | None:intergenic | 25.0% |
| ! | AACACTATCATATAATGTTG+GGG | + | chr3_4:78962384-78962403 | None:intergenic | 25.0% |
| ! | GAACACTATCATATAATGTT+GGG | + | chr3_4:78962385-78962404 | None:intergenic | 25.0% |
| ! | TGAACACTATCATATAATGT+TGG | + | chr3_4:78962386-78962405 | None:intergenic | 25.0% |
| !!! | CTTTTGATTTTTCCTTTTCA+TGG | - | chr3_4:78962720-78962739 | Msa0525450:intron | 25.0% |
| ! | TACATCAAAATAGTAGAAGT+CGG | + | chr3_4:78962762-78962781 | None:intergenic | 25.0% |
| ! | AAAATGTATAAGCTATGGTT+TGG | + | chr3_4:78962849-78962868 | None:intergenic | 25.0% |
| !! | AAACCATAGCTTATACATTT+TGG | - | chr3_4:78962848-78962867 | Msa0525450:intron | 25.0% |
| ! | ATTCCAAAATGTATAAGCTA+TGG | + | chr3_4:78962854-78962873 | None:intergenic | 25.0% |
| ! | GAGTTGTTTAAAAAAAACAC+AGG | - | chr3_4:78962910-78962929 | Msa0525450:intron | 25.0% |
| ! | AAACATATTTAAAGAGGGAA+TGG | - | chr3_4:78963374-78963393 | Msa0525450:intron | 25.0% |
| ! | TTAATGGTGTAGATGTAAAA+TGG | - | chr3_4:78963503-78963522 | Msa0525450:intron | 25.0% |
| ! | AGATGTAAAATGGAGAAAAA+TGG | - | chr3_4:78963513-78963532 | Msa0525450:intron | 25.0% |
| ! | CAAAGTAAATATTGATGAGA+GGG | + | chr3_4:78964149-78964168 | None:intergenic | 25.0% |
| ! | TCAAAGTAAATATTGATGAG+AGG | + | chr3_4:78964150-78964169 | None:intergenic | 25.0% |
| !!! | ATCTCTTAACTTCTACTTTT+TGG | - | chr3_4:78964263-78964282 | Msa0525450:intron | 25.0% |
| !!! | TCTCTTAACTTCTACTTTTT+GGG | - | chr3_4:78964264-78964283 | Msa0525450:intron | 25.0% |
| ! | ATATATATACGGCATGATAA+GGG | + | chr3_4:78964468-78964487 | None:intergenic | 25.0% |
| ! | AATATATATACGGCATGATA+AGG | + | chr3_4:78964469-78964488 | None:intergenic | 25.0% |
| !! | TTTTTCTGACAAAATTATGC+AGG | - | chr3_4:78964614-78964633 | Msa0525450:CDS | 25.0% |
| ! | ATATGAGTTTATTTCACTTG+GGG | + | chr3_4:78964714-78964733 | None:intergenic | 25.0% |
| !!! | TATTTTAAGTTTAGCGCTTA+TGG | + | chr3_4:78964744-78964763 | None:intergenic | 25.0% |
| ! | ATGTAAATACTTGCTTGATT+AGG | + | chr3_4:78965060-78965079 | None:intergenic | 25.0% |
| !!! | TATAAGGTGTTGTTAAACTT+GGG | - | chr3_4:78965270-78965289 | Msa0525450:intron | 25.0% |
| ! | TGGACTTAAAGATGAAAAAA+TGG | - | chr3_4:78965323-78965342 | Msa0525450:intron | 25.0% |
| ! | CTTTATAGTACAAGGAAATA+GGG | + | chr3_4:78965652-78965671 | None:intergenic | 25.0% |
| ! | ACTTTATAGTACAAGGAAAT+AGG | + | chr3_4:78965653-78965672 | None:intergenic | 25.0% |
| ! | TATTTCCTTGTACTATAAAG+TGG | - | chr3_4:78965652-78965671 | Msa0525450:intron | 25.0% |
| !!! | ACATTTTTGGCTTATTTCAA+AGG | + | chr3_4:78965699-78965718 | None:intergenic | 25.0% |
| !! | CCAAAATTATGTCACATTTT+TGG | + | chr3_4:78965712-78965731 | None:intergenic | 25.0% |
| !! | CCAAAAATGTGACATAATTT+TGG | - | chr3_4:78965709-78965728 | Msa0525450:intron | 25.0% |
| !!! | TTTTTTGGAGTTATTCCGTT+TGG | - | chr3_4:78960526-78960545 | Msa0525450:CDS | 30.0% |
| TTGCTTATAATAGTGTTCAG+AGG | - | chr3_4:78960857-78960876 | Msa0525450:CDS | 30.0% | |
| TGCTTATAATAGTGTTCAGA+GGG | - | chr3_4:78960858-78960877 | Msa0525450:CDS | 30.0% | |
| !!! | CATATTTGTCATTTTTGCAG+TGG | - | chr3_4:78960995-78961014 | Msa0525450:CDS | 30.0% |
| ACAAGAACAAAAGCTCAAAT+AGG | - | chr3_4:78961559-78961578 | Msa0525450:CDS | 30.0% | |
| CCACGTCAAATATCAAATAA+TGG | + | chr3_4:78961625-78961644 | None:intergenic | 30.0% | |
| CCATTATTTGATATTTGACG+TGG | - | chr3_4:78961622-78961641 | Msa0525450:intron | 30.0% | |
| CAGCTTTACAAATTTCTGAA+AGG | + | chr3_4:78961722-78961741 | None:intergenic | 30.0% | |
| GTACATGTAAATAAATGGCA+AGG | + | chr3_4:78961974-78961993 | None:intergenic | 30.0% | |
| ! | CAATATTTTTCCTTGATGTG+AGG | + | chr3_4:78962287-78962306 | None:intergenic | 30.0% |
| CTCACATCAAGGAAAAATAT+TGG | - | chr3_4:78962285-78962304 | Msa0525450:intron | 30.0% | |
| GAATAGTATGTTTAGTGCAA+AGG | + | chr3_4:78962560-78962579 | None:intergenic | 30.0% | |
| !!! | TTTTTGGGTCTACAAAGATT+TGG | - | chr3_4:78962631-78962650 | Msa0525450:intron | 30.0% |
| !! | TTTTGGGTCTACAAAGATTT+GGG | - | chr3_4:78962632-78962651 | Msa0525450:intron | 30.0% |
| AAAAGCTAGAAACCATGAAA+AGG | + | chr3_4:78962735-78962754 | None:intergenic | 30.0% | |
| !!! | AGCATTCTTTTTTTTTGTGG+TGG | - | chr3_4:78963187-78963206 | Msa0525450:intron | 30.0% |
| !!! | TTCTTTTTTTTTGTGGTGGT+CGG | - | chr3_4:78963191-78963210 | Msa0525450:intron | 30.0% |
| TATTGTCTTTAATGTCCACT+TGG | - | chr3_4:78963615-78963634 | Msa0525450:intron | 30.0% | |
| TCAAATAAGTGAGAAATCTG+AGG | + | chr3_4:78963823-78963842 | None:intergenic | 30.0% | |
| !!! | CAATTTTTTCCCTTTCTCTT+TGG | - | chr3_4:78963882-78963901 | Msa0525450:intron | 30.0% |
| !! | ACTTATTTTTCATCCGAACT+CGG | + | chr3_4:78963943-78963962 | None:intergenic | 30.0% |
| GAGGAGGAAGAATATATATA+CGG | + | chr3_4:78964479-78964498 | None:intergenic | 30.0% | |
| TTGAAGTAAAAGAAAAGAGG+AGG | + | chr3_4:78964495-78964514 | None:intergenic | 30.0% | |
| TGTCAGAAAAAAAATCAGCA+AGG | + | chr3_4:78964605-78964624 | None:intergenic | 30.0% | |
| AAGTGAACTAAATTAGAACC+TGG | + | chr3_4:78964999-78965018 | None:intergenic | 30.0% | |
| AGTTCACTTTGCAACTATTA+TGG | - | chr3_4:78965010-78965029 | Msa0525450:intron | 30.0% | |
| AAATAACCTGCATGATAAAC+TGG | + | chr3_4:78965201-78965220 | None:intergenic | 30.0% | |
| !! | GTATAAGGTGTTGTTAAACT+TGG | - | chr3_4:78965269-78965288 | Msa0525450:intron | 30.0% |
| ! | GTTAAACTTGGGTTTTTGTT+TGG | - | chr3_4:78965281-78965300 | Msa0525450:intron | 30.0% |
| !! | TTTTGTTTGGTTGTTGCTAT+AGG | - | chr3_4:78965294-78965313 | Msa0525450:intron | 30.0% |
| TTTGTTTGGTTGTTGCTATA+GGG | - | chr3_4:78965295-78965314 | Msa0525450:intron | 30.0% | |
| ATGATAGATACAACTAGACT+TGG | + | chr3_4:78965385-78965404 | None:intergenic | 30.0% | |
| AGTCTAGTTGTATCTATCAT+TGG | - | chr3_4:78965385-78965404 | Msa0525450:CDS | 30.0% | |
| AAGACTCATTATCATTGCAT+CGG | - | chr3_4:78965426-78965445 | Msa0525450:intron | 30.0% | |
| ACAATGATAGAATTCTTGTG+AGG | + | chr3_4:78965623-78965642 | None:intergenic | 30.0% | |
| ! | TTCAAAGGCTTTAGCTTAAT+GGG | + | chr3_4:78965684-78965703 | None:intergenic | 30.0% |
| ! | TTTCAAAGGCTTTAGCTTAA+TGG | + | chr3_4:78965685-78965704 | None:intergenic | 30.0% |
| ATTATCATCTCATGGATACT+GGG | - | chr3_4:78965740-78965759 | Msa0525450:CDS | 30.0% | |
| AATTCATAACAGTCTACCAA+AGG | - | chr3_4:78965820-78965839 | Msa0525450:intron | 30.0% | |
| TCAGCTAAATCTTCTCTATA+AGG | + | chr3_4:78966031-78966050 | None:intergenic | 30.0% | |
| GCACATCAAGAAGTGAATAA+TGG | - | chr3_4:78960351-78960370 | Msa0525450:CDS | 35.0% | |
| TCACATTAACGGCTACTATA+CGG | + | chr3_4:78960386-78960405 | None:intergenic | 35.0% | |
| GAATCATCATGGTTATAAGG+AGG | + | chr3_4:78960423-78960442 | None:intergenic | 35.0% | |
| GAGGAATCATCATGGTTATA+AGG | + | chr3_4:78960426-78960445 | None:intergenic | 35.0% | |
| ! | CTGGTTTCTGTTTTCATCAA+TGG | + | chr3_4:78960606-78960625 | None:intergenic | 35.0% |
| CATTGATGAAAACAGAAACC+AGG | - | chr3_4:78960604-78960623 | Msa0525450:CDS | 35.0% | |
| AAGAAGTTCTTGGCATATGT+AGG | - | chr3_4:78960631-78960650 | Msa0525450:CDS | 35.0% | |
| AATTACTATTTCCGGGATCA+AGG | + | chr3_4:78960684-78960703 | None:intergenic | 35.0% | |
| !! | ATTGTTTTACCTCATATCCG+TGG | + | chr3_4:78961046-78961065 | None:intergenic | 35.0% |
| TTGCTGTGGATCATACTTAT+TGG | - | chr3_4:78961179-78961198 | Msa0525450:intron | 35.0% | |
| TGCCTGCATAATTCAATCAT+TGG | - | chr3_4:78961211-78961230 | Msa0525450:intron | 35.0% | |
| AGCCAATGATTGAATTATGC+AGG | + | chr3_4:78961216-78961235 | None:intergenic | 35.0% | |
| CTACAACACAACCAAAATTG+AGG | + | chr3_4:78961267-78961286 | None:intergenic | 35.0% | |
| ACTAACTTAGGATAGAGACT+TGG | + | chr3_4:78961477-78961496 | None:intergenic | 35.0% | |
| AAAAGCTCAAATAGGAAACG+TGG | - | chr3_4:78961567-78961586 | Msa0525450:CDS | 35.0% | |
| AAAGCTCAAATAGGAAACGT+GGG | - | chr3_4:78961568-78961587 | Msa0525450:CDS | 35.0% | |
| AGCAGTATTTCACAAACCAT+GGG | + | chr3_4:78961749-78961768 | None:intergenic | 35.0% | |
| AAGCAGTATTTCACAAACCA+TGG | + | chr3_4:78961750-78961769 | None:intergenic | 35.0% | |
| GGTTTGTGAAATACTGCTTA+TGG | - | chr3_4:78961751-78961770 | Msa0525450:CDS | 35.0% | |
| AAAAAGGAATTAGCACCTTC+AGG | + | chr3_4:78961813-78961832 | None:intergenic | 35.0% | |
| AGGTGATGAACAACAGAAAA+AGG | + | chr3_4:78961829-78961848 | None:intergenic | 35.0% | |
| !! | ATATAATGTTGGGGAGTATC+AGG | + | chr3_4:78962375-78962394 | None:intergenic | 35.0% |
| TTTGGGTCTACAAAGATTTG+GGG | - | chr3_4:78962633-78962652 | Msa0525450:intron | 35.0% | |
| TCCGATATTAAATACTCCCT+CGG | - | chr3_4:78962874-78962893 | Msa0525450:intron | 35.0% | |
| !! | ACCGAGGGAGTATTTAATAT+CGG | + | chr3_4:78962878-78962897 | None:intergenic | 35.0% |
| CTCATATAAAAAGAGACCGA+GGG | + | chr3_4:78962893-78962912 | None:intergenic | 35.0% | |
| ACTCATATAAAAAGAGACCG+AGG | + | chr3_4:78962894-78962913 | None:intergenic | 35.0% | |
| ATTACTCCCATAAAAAGGGA+CGG | - | chr3_4:78963144-78963163 | Msa0525450:intron | 35.0% | |
| !!! | TCTTTTTTTTTGTGGTGGTC+GGG | - | chr3_4:78963192-78963211 | Msa0525450:intron | 35.0% |
| CATAATATATGCAAGATCCG+TGG | + | chr3_4:78963225-78963244 | None:intergenic | 35.0% | |
| ! | TGAGTTTAACTCAGTTGGTA+TGG | + | chr3_4:78963254-78963273 | None:intergenic | 35.0% |
| GAATCATGATATTGTGTGTG+TGG | + | chr3_4:78963449-78963468 | None:intergenic | 35.0% | |
| CGTCTCTCTCTCATATTTAA+TGG | - | chr3_4:78963487-78963506 | Msa0525450:intron | 35.0% | |
| TACCAGTTAAGTTAAGCTCA+CGG | + | chr3_4:78963766-78963785 | None:intergenic | 35.0% | |
| GTTAACACACCAAAGAGAAA+GGG | + | chr3_4:78963894-78963913 | None:intergenic | 35.0% | |
| ! | TTTGGTGTGTTAACCCTAAA+GGG | - | chr3_4:78963900-78963919 | Msa0525450:intron | 35.0% |
| TTCAAATCAAACACTAGCGA+GGG | + | chr3_4:78964074-78964093 | None:intergenic | 35.0% | |
| !!! | TCTACTTTTTGGGATGATAC+AGG | - | chr3_4:78964274-78964293 | Msa0525450:intron | 35.0% |
| AGATACTTTCTCATTGAGAG+TGG | - | chr3_4:78964835-78964854 | Msa0525450:intron | 35.0% | |
| TGCAAAGCTGATGATATTTC+TGG | - | chr3_4:78964919-78964938 | Msa0525450:intron | 35.0% | |
| AAGGAAAGAAGCAGAGTTAA+GGG | + | chr3_4:78964974-78964993 | None:intergenic | 35.0% | |
| ACTAAATTAGAACCTGGAGA+AGG | + | chr3_4:78964993-78965012 | None:intergenic | 35.0% | |
| ! | TGATGTCGATTAGAATGTGT+TGG | - | chr3_4:78965096-78965115 | Msa0525450:intron | 35.0% |
| ! | GATGTCGATTAGAATGTGTT+GGG | - | chr3_4:78965097-78965116 | Msa0525450:intron | 35.0% |
| CTAGTTGTATCTATCATTGG+TGG | - | chr3_4:78965388-78965407 | Msa0525450:CDS | 35.0% | |
| AATATGTACACATACGCAGA+AGG | + | chr3_4:78965484-78965503 | None:intergenic | 35.0% | |
| TTCTGCGTATGTGTACATAT+TGG | - | chr3_4:78965483-78965502 | Msa0525450:intron | 35.0% | |
| AGTGACCACTTTATAGTACA+AGG | + | chr3_4:78965660-78965679 | None:intergenic | 35.0% | |
| TGCAGATCATTATCATCTCA+TGG | - | chr3_4:78965732-78965751 | Msa0525450:CDS | 35.0% | |
| CATTATCATCTCATGGATAC+TGG | - | chr3_4:78965739-78965758 | Msa0525450:CDS | 35.0% | |
| !! | TACCTCATTACTGCTTTTGT+GGG | - | chr3_4:78965791-78965810 | Msa0525450:CDS | 35.0% |
| !! | CTTGCTTTGAGGAATCATCA+TGG | + | chr3_4:78960434-78960453 | None:intergenic | 40.0% |
| TGATTCCTCAAAGCAAGATC+AGG | - | chr3_4:78960437-78960456 | Msa0525450:CDS | 40.0% | |
| TAGTACCTGATCTTGCTTTG+AGG | + | chr3_4:78960445-78960464 | None:intergenic | 40.0% | |
| GATGAAAACAGAAACCAGGA+TGG | - | chr3_4:78960608-78960627 | Msa0525450:CDS | 40.0% | |
| TCTGATGTATTCAGTTGCTG+TGG | - | chr3_4:78961165-78961184 | Msa0525450:intron | 40.0% | |
| ! | CAATCATTGGCTGCAAATCT+TGG | - | chr3_4:78961224-78961243 | Msa0525450:CDS | 40.0% |
| ! | CACTGGTAAGACCTCAATTT+TGG | - | chr3_4:78961253-78961272 | Msa0525450:CDS | 40.0% |
| TGATATCGCCCAACTTTGTA+AGG | + | chr3_4:78961428-78961447 | None:intergenic | 40.0% | |
| AAGCTCAAATAGGAAACGTG+GGG | - | chr3_4:78961569-78961588 | Msa0525450:CDS | 40.0% | |
| TTTGTAAAGCTGAGTACCCA+TGG | - | chr3_4:78961730-78961749 | Msa0525450:CDS | 40.0% | |
| TAATATGGATGCGTGCATGT+GGG | + | chr3_4:78962339-78962358 | None:intergenic | 40.0% | |
| TTAATATGGATGCGTGCATG+TGG | + | chr3_4:78962340-78962359 | None:intergenic | 40.0% | |
| AAATTGATCGTGGCAGTGAT+TGG | - | chr3_4:78962529-78962548 | Msa0525450:intron | 40.0% | |
| AATTGATCGTGGCAGTGATT+GGG | - | chr3_4:78962530-78962549 | Msa0525450:intron | 40.0% | |
| TACTATTCCACATCCCTGTA+TGG | - | chr3_4:78962572-78962591 | Msa0525450:intron | 40.0% | |
| ACTATTCCACATCCCTGTAT+GGG | - | chr3_4:78962573-78962592 | Msa0525450:intron | 40.0% | |
| !!! | TGCAGCACTCTCTTGTTTTT+GGG | - | chr3_4:78962616-78962635 | Msa0525450:intron | 40.0% |
| !! | CATTCAAGGGCATTAAAGAC+AGG | + | chr3_4:78962795-78962814 | None:intergenic | 40.0% |
| CTCTTCAAGGATGCATTCAA+GGG | + | chr3_4:78962808-78962827 | None:intergenic | 40.0% | |
| TCTCTTCAAGGATGCATTCA+AGG | + | chr3_4:78962809-78962828 | None:intergenic | 40.0% | |
| TTGAATGCATCCTTGAAGAG+AGG | - | chr3_4:78962808-78962827 | Msa0525450:intron | 40.0% | |
| TCCTTGAAGAGAGGTCATAT+AGG | - | chr3_4:78962817-78962836 | Msa0525450:intron | 40.0% | |
| ACCTATATGACCTCTCTTCA+AGG | + | chr3_4:78962821-78962840 | None:intergenic | 40.0% | |
| AAGAGAGGTCATATAGGTCA+TGG | - | chr3_4:78962823-78962842 | Msa0525450:intron | 40.0% | |
| TTACTCCCATAAAAAGGGAC+GGG | - | chr3_4:78963145-78963164 | Msa0525450:intron | 40.0% | |
| !!! | CTTTTTTTTTGTGGTGGTCG+GGG | - | chr3_4:78963193-78963212 | Msa0525450:intron | 40.0% |
| CCACATGAGTTTAACTCAGT+TGG | + | chr3_4:78963259-78963278 | None:intergenic | 40.0% | |
| CCAACTGAGTTAAACTCATG+TGG | - | chr3_4:78963256-78963275 | Msa0525450:intron | 40.0% | |
| TTCCGTGAGCTTAACTTAAC+TGG | - | chr3_4:78963761-78963780 | Msa0525450:intron | 40.0% | |
| GGTTAACACACCAAAGAGAA+AGG | + | chr3_4:78963895-78963914 | None:intergenic | 40.0% | |
| ! | CTTTGGTGTGTTAACCCTAA+AGG | - | chr3_4:78963899-78963918 | Msa0525450:intron | 40.0% |
| GTTCAAATCAAACACTAGCG+AGG | + | chr3_4:78964075-78964094 | None:intergenic | 40.0% | |
| !!! | AGCTCGGCTTTTTTGAACTA+AGG | + | chr3_4:78964121-78964140 | None:intergenic | 40.0% |
| !!! | TTTTTGGGATGATACAGGTG+AGG | - | chr3_4:78964279-78964298 | Msa0525450:intron | 40.0% |
| GTAATGGCTGCATGTTTCTT+TGG | - | chr3_4:78964335-78964354 | Msa0525450:intron | 40.0% | |
| TATGTAAAACCCCCTGCTAA+AGG | - | chr3_4:78964368-78964387 | Msa0525450:intron | 40.0% | |
| TCAATTACTCCTTTAGCAGG+GGG | + | chr3_4:78964380-78964399 | None:intergenic | 40.0% | |
| CTCAATTACTCCTTTAGCAG+GGG | + | chr3_4:78964381-78964400 | None:intergenic | 40.0% | |
| CCTCAATTACTCCTTTAGCA+GGG | + | chr3_4:78964382-78964401 | None:intergenic | 40.0% | |
| CCTGCTAAAGGAGTAATTGA+GGG | - | chr3_4:78964380-78964399 | Msa0525450:intron | 40.0% | |
| ATGTTTGTTCCCAAACTCAG+CGG | - | chr3_4:78964404-78964423 | Msa0525450:intron | 40.0% | |
| ! | AGTTCACGCAGAAAAGTGTA+TGG | + | chr3_4:78964526-78964545 | None:intergenic | 40.0% |
| GTGCTATCTCGAAAAATACC+TGG | - | chr3_4:78964664-78964683 | Msa0525450:CDS | 40.0% | |
| AAAATACCTGGTACTAAGCG+TGG | - | chr3_4:78964676-78964695 | Msa0525450:CDS | 40.0% | |
| GTTGCAATGATTTCTGTGAC+TGG | - | chr3_4:78964889-78964908 | Msa0525450:intron | 40.0% | |
| GAAGGAAAGAAGCAGAGTTA+AGG | + | chr3_4:78964975-78964994 | None:intergenic | 40.0% | |
| GTTGTTGCTATAGGGTTTCT+TGG | - | chr3_4:78965303-78965322 | Msa0525450:intron | 40.0% | |
| !! | TACAACTAGACTTGGTGCTA+TGG | + | chr3_4:78965377-78965396 | None:intergenic | 40.0% |
| ! | TCTATCATTGGTGGTTCTTC+TGG | - | chr3_4:78965397-78965416 | Msa0525450:intron | 40.0% |
| AGGAGTGGAATTAAAGCGAA+TGG | + | chr3_4:78965569-78965588 | None:intergenic | 40.0% | |
| ATCTCATGGATACTGGGTTT+GGG | - | chr3_4:78965746-78965765 | Msa0525450:CDS | 40.0% | |
| ATACTGGGTTTGGGAATCAT+TGG | - | chr3_4:78965755-78965774 | Msa0525450:CDS | 40.0% | |
| !! | CTACCTCATTACTGCTTTTG+TGG | - | chr3_4:78965790-78965809 | Msa0525450:CDS | 40.0% |
| AACCCACAAAAGCAGTAATG+AGG | + | chr3_4:78965796-78965815 | None:intergenic | 40.0% | |
| !! | TCATTACTGCTTTTGTGGGT+TGG | - | chr3_4:78965795-78965814 | Msa0525450:intron | 40.0% |
| TCATAACAGTCTACCAAAGG+TGG | - | chr3_4:78965823-78965842 | Msa0525450:intron | 40.0% | |
| ATGAACACATTTGCCACCTT+TGG | + | chr3_4:78965839-78965858 | None:intergenic | 40.0% | |
| AAGGTGGCAAATGTGTTCAT+CGG | - | chr3_4:78965839-78965858 | Msa0525450:intron | 40.0% | |
| GCTCATTGTGTTTCCTCTAA+TGG | - | chr3_4:78965862-78965881 | Msa0525450:intron | 40.0% | |
| ! | ACGATATACAGTGCCATTAG+AGG | + | chr3_4:78965878-78965897 | None:intergenic | 40.0% |
| AGACACTGTTGTAACGTTTG+TGG | - | chr3_4:78965925-78965944 | Msa0525450:intron | 40.0% | |
| TGTAACGTTTGTGGAGGTTA+AGG | - | chr3_4:78965934-78965953 | Msa0525450:intron | 40.0% | |
| ! | TATAAGGAGGTGTGCCAGAA+GGG | + | chr3_4:78960410-78960429 | None:intergenic | 45.0% |
| ! | TTATAAGGAGGTGTGCCAGA+AGG | + | chr3_4:78960411-78960430 | None:intergenic | 45.0% |
| ACCAGGATGGAAGAAGTTCT+TGG | - | chr3_4:78960621-78960640 | Msa0525450:CDS | 45.0% | |
| TTCTTGGCATATGTAGGTCC+TGG | - | chr3_4:78960637-78960656 | Msa0525450:CDS | 45.0% | |
| !! | TCCTGGTTTTCTTGTCTCCT+TGG | - | chr3_4:78960654-78960673 | Msa0525450:CDS | 45.0% |
| ACTATTTCCGGGATCAAGGT+AGG | + | chr3_4:78960680-78960699 | None:intergenic | 45.0% | |
| !! | GTGGAAACTGATTTGCAAGC+TGG | - | chr3_4:78961014-78961033 | Msa0525450:CDS | 45.0% |
| ATAGCTGCAGACATACCTGA+AGG | - | chr3_4:78961795-78961814 | Msa0525450:intron | 45.0% | |
| !! | GAATGGTTAGCCTCACATCA+AGG | - | chr3_4:78962274-78962293 | Msa0525450:intron | 45.0% |
| CTATTCCACATCCCTGTATG+GGG | - | chr3_4:78962574-78962593 | Msa0525450:intron | 45.0% | |
| !!! | GTGCAGCACTCTCTTGTTTT+TGG | - | chr3_4:78962615-78962634 | Msa0525450:intron | 45.0% |
| ! | ACACTCCCGTCCCTTTTTAT+GGG | + | chr3_4:78963153-78963172 | None:intergenic | 45.0% |
| ! | ATAAAAAGGGACGGGAGTGT+CGG | - | chr3_4:78963153-78963172 | Msa0525450:intron | 45.0% |
| CCTATGTGACCTCTCTTCAA+GGG | + | chr3_4:78963646-78963665 | None:intergenic | 45.0% | |
| ACCTATGTGACCTCTCTTCA+AGG | + | chr3_4:78963647-78963666 | None:intergenic | 45.0% | |
| AAGAGAGGTCACATAGGTCA+TGG | - | chr3_4:78963649-78963668 | Msa0525450:intron | 45.0% | |
| TGATGAGAGGGTAGATAGCT+CGG | + | chr3_4:78964137-78964156 | None:intergenic | 45.0% | |
| GATGATACAGGTGAGGAAGT+TGG | - | chr3_4:78964286-78964305 | Msa0525450:intron | 45.0% | |
| CCCTGCTAAAGGAGTAATTG+AGG | - | chr3_4:78964379-78964398 | Msa0525450:intron | 45.0% | |
| CCCTCAATTACTCCTTTAGC+AGG | + | chr3_4:78964383-78964402 | None:intergenic | 45.0% | |
| !! | CATGATAAGGGCACCCAAAA+GGG | + | chr3_4:78964456-78964475 | None:intergenic | 45.0% |
| ATAGCACTAGAGCAGAATGG+AGG | + | chr3_4:78964651-78964670 | None:intergenic | 45.0% | |
| GAGATAGCACTAGAGCAGAA+TGG | + | chr3_4:78964654-78964673 | None:intergenic | 45.0% | |
| ! | CATGATAAACTGGCCTGCAT+AGG | + | chr3_4:78965191-78965210 | None:intergenic | 45.0% |
| GTACACATACGCAGAAGGAA+GGG | + | chr3_4:78965479-78965498 | None:intergenic | 45.0% | |
| TGTACACATACGCAGAAGGA+AGG | + | chr3_4:78965480-78965499 | None:intergenic | 45.0% | |
| CTGCTGCTAAACTTAAGGAG+TGG | + | chr3_4:78965584-78965603 | None:intergenic | 45.0% | |
| TCCTTAAGTTTAGCAGCAGC+AGG | - | chr3_4:78965585-78965604 | Msa0525450:intron | 45.0% | |
| TCCTGCTGCTGCTAAACTTA+AGG | + | chr3_4:78965589-78965608 | None:intergenic | 45.0% | |
| ATTCTTGTGAGGTCCCATCT+TGG | + | chr3_4:78965612-78965631 | None:intergenic | 45.0% | |
| CATCTCATGGATACTGGGTT+TGG | - | chr3_4:78965745-78965764 | Msa0525450:CDS | 45.0% | |
| AGGTGGCAAATGTGTTCATC+GGG | - | chr3_4:78965840-78965859 | Msa0525450:intron | 45.0% | |
| CACTGTTGTAACGTTTGTGG+AGG | - | chr3_4:78965928-78965947 | Msa0525450:intron | 45.0% | |
| AATGCAAACCCACGTGGAAA+AGG | - | chr3_4:78965967-78965986 | Msa0525450:intron | 45.0% | |
| ATGCAAACCCACGTGGAAAA+GGG | - | chr3_4:78965968-78965987 | Msa0525450:intron | 45.0% | |
| GAAAAGGGGTTCGTAAACGA+TGG | - | chr3_4:78965983-78966002 | Msa0525450:CDS | 45.0% | |
| !!! | AATATCAATATAATTATTTT+TGG | + | chr3_4:78961085-78961104 | None:intergenic | 5.0% |
| !!! | TTTAATTTAAATATACTAAA+AGG | - | chr3_4:78962066-78962085 | Msa0525450:CDS | 5.0% |
| GCCAGAAGGGGTCACATTAA+CGG | + | chr3_4:78960397-78960416 | None:intergenic | 50.0% | |
| ! | ATAAGGAGGTGTGCCAGAAG+GGG | + | chr3_4:78960409-78960428 | None:intergenic | 50.0% |
| GCCAAGAACTTCTTCCATCC+TGG | + | chr3_4:78960625-78960644 | None:intergenic | 50.0% | |
| GCCAAGGAGACAAGAAAACC+AGG | + | chr3_4:78960658-78960677 | None:intergenic | 50.0% | |
| TTGCAAGCTGGAGCTAACCA+CGG | - | chr3_4:78961026-78961045 | Msa0525450:CDS | 50.0% | |
| TGGAGCTAACCACGGATATG+AGG | - | chr3_4:78961034-78961053 | Msa0525450:CDS | 50.0% | |
| GCAAATCTTGGAGTGTGCAC+TGG | - | chr3_4:78961236-78961255 | Msa0525450:CDS | 50.0% | |
| ! | GACACTCCCGTCCCTTTTTA+TGG | + | chr3_4:78963154-78963173 | None:intergenic | 50.0% |
| !! | TAAAAAGGGACGGGAGTGTC+GGG | - | chr3_4:78963154-78963173 | Msa0525450:intron | 50.0% |
| !! | TCTTCAAGGGAGCATCCAAG+TGG | + | chr3_4:78963633-78963652 | None:intergenic | 50.0% |
| TTGGATGCTCCCTTGAAGAG+AGG | - | chr3_4:78963634-78963653 | Msa0525450:intron | 50.0% | |
| CCCTTGAAGAGAGGTCACAT+AGG | - | chr3_4:78963643-78963662 | Msa0525450:intron | 50.0% | |
| CCAGATCGCGTTTCCCTTTA+GGG | + | chr3_4:78963916-78963935 | None:intergenic | 50.0% | |
| ACCAGATCGCGTTTCCCTTT+AGG | + | chr3_4:78963917-78963936 | None:intergenic | 50.0% | |
| GCGATCTGGTAATCCGAGTT+CGG | - | chr3_4:78963927-78963946 | Msa0525450:intron | 50.0% | |
| GTTCCCAAACTCAGCGGAAA+TGG | - | chr3_4:78964410-78964429 | Msa0525450:intron | 50.0% | |
| GCACCATTTCCGCTGAGTTT+GGG | + | chr3_4:78964416-78964435 | None:intergenic | 50.0% | |
| AGCACCATTTCCGCTGAGTT+TGG | + | chr3_4:78964417-78964436 | None:intergenic | 50.0% | |
| ! | AGGCGATGCTATTGCCCTTT+TGG | - | chr3_4:78964439-78964458 | Msa0525450:intron | 50.0% |
| ! | GGCGATGCTATTGCCCTTTT+GGG | - | chr3_4:78964440-78964459 | Msa0525450:intron | 50.0% |
| !! | GCATGATAAGGGCACCCAAA+AGG | + | chr3_4:78964457-78964476 | None:intergenic | 50.0% |
| TTGATGCCACGCTTAGTACC+AGG | + | chr3_4:78964685-78964704 | None:intergenic | 50.0% | |
| CTCTGCTTCTTTCCTTCTCC+AGG | - | chr3_4:78964978-78964997 | Msa0525450:intron | 50.0% | |
| TCCTGAGGCTAGCAATGCTA+TGG | + | chr3_4:78965146-78965165 | None:intergenic | 50.0% | |
| GATGGCAGAACTTTGTCCTG+AGG | + | chr3_4:78965161-78965180 | None:intergenic | 50.0% | |
| GGACAAAGTTCTGCCATCAC+TGG | - | chr3_4:78965163-78965182 | Msa0525450:intron | 50.0% | |
| TGCAGGCCAGTTTATCATGC+AGG | - | chr3_4:78965192-78965211 | Msa0525450:CDS | 50.0% | |
| !! | ATTGGTGGTTCTTCTGGAGC+TGG | - | chr3_4:78965403-78965422 | Msa0525450:intron | 50.0% |
| TACGCAGAAGGAAGGGAGAA+CGG | + | chr3_4:78965472-78965491 | None:intergenic | 50.0% | |
| TGCAAACCCACGTGGAAAAG+GGG | - | chr3_4:78965969-78965988 | Msa0525450:intron | 50.0% | |
| ! | TACGAACCCCTTTTCCACGT+GGG | + | chr3_4:78965978-78965997 | None:intergenic | 50.0% |
| ! | TTACGAACCCCTTTTCCACG+TGG | + | chr3_4:78965979-78965998 | None:intergenic | 50.0% |
| AGCTGATATCACTCGACCAG+AGG | - | chr3_4:78966045-78966064 | Msa0525450:CDS | 50.0% | |
| GCTGATATCACTCGACCAGA+GGG | - | chr3_4:78966046-78966065 | Msa0525450:CDS | 50.0% | |
| GCCGTTAATGTGACCCCTTC+TGG | - | chr3_4:78960393-78960412 | Msa0525450:CDS | 55.0% | |
| TCCTTGGCCTACCTTGATCC+CGG | - | chr3_4:78960670-78960689 | Msa0525450:CDS | 55.0% | |
| GCGCGTGCATGTGTGTTTGA+TGG | + | chr3_4:78962152-78962171 | None:intergenic | 55.0% | |
| GATCGTGGCAGTGATTGGGA+CGG | - | chr3_4:78962534-78962553 | Msa0525450:intron | 55.0% | |
| TTCCACATCCCTGTATGGGG+AGG | - | chr3_4:78962577-78962596 | Msa0525450:intron | 55.0% | |
| TCCACATCCCTGTATGGGGA+GGG | - | chr3_4:78962578-78962597 | Msa0525450:intron | 55.0% | |
| ACAGAACCCCTCCCCATACA+GGG | + | chr3_4:78962588-78962607 | None:intergenic | 55.0% | |
| AACAGAACCCCTCCCCATAC+AGG | + | chr3_4:78962589-78962608 | None:intergenic | 55.0% | |
| CCCTAAAGGGAAACGCGATC+TGG | - | chr3_4:78963913-78963932 | Msa0525450:intron | 55.0% | |
| !! | CTCAGCGGAAATGGTGCTGT+AGG | - | chr3_4:78964419-78964438 | Msa0525450:intron | 55.0% |
| ! | GCCATAGCATTGCTAGCCTC+AGG | - | chr3_4:78965142-78965161 | Msa0525450:intron | 55.0% |
| GCCATCACTGGAACCTATGC+AGG | - | chr3_4:78965175-78965194 | Msa0525450:CDS | 55.0% | |
| GCCTGCATAGGTTCCAGTGA+TGG | + | chr3_4:78965179-78965198 | None:intergenic | 55.0% | |
| TAGCAGCAGCAGGACCAAGA+TGG | - | chr3_4:78965595-78965614 | Msa0525450:intron | 55.0% | |
| AGCAGCAGCAGGACCAAGAT+GGG | - | chr3_4:78965596-78965615 | Msa0525450:intron | 55.0% | |
| CCACGTGGGTTTGCATTGCT+GGG | + | chr3_4:78965964-78965983 | None:intergenic | 55.0% | |
| TCCACGTGGGTTTGCATTGC+TGG | + | chr3_4:78965965-78965984 | None:intergenic | 55.0% | |
| TCACTCGACCAGAGGGACTT+AGG | - | chr3_4:78966053-78966072 | Msa0525450:CDS | 55.0% | |
| TCCGGGATCAAGGTAGGCCA+AGG | + | chr3_4:78960674-78960693 | None:intergenic | 60.0% | |
| CCACATCCCTGTATGGGGAG+GGG | - | chr3_4:78962579-78962598 | Msa0525450:intron | 60.0% | |
| TGGGGAGGGGTTCTGTTGAC+TGG | - | chr3_4:78962592-78962611 | Msa0525450:intron | 60.0% | |
| ! | GGGGAGGGGTTCTGTTGACT+GGG | - | chr3_4:78962593-78962612 | Msa0525450:intron | 60.0% |
| GGTGGTCGGGGTTTGAACCA+CGG | - | chr3_4:78963205-78963224 | Msa0525450:intron | 60.0% | |
| CCCAGCAATGCAAACCCACG+TGG | - | chr3_4:78965961-78965980 | Msa0525450:intron | 60.0% | |
| CCCCTCCCCATACAGGGATG+TGG | + | chr3_4:78962582-78962601 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 78960348 | 78966081 | 78960348 | ID=Msa0525450;Name=Msa0525450 |
| chr3_4 | mRNA | 78960348 | 78966081 | 78960348 | ID=Msa0525450-mRNA-1;Parent=Msa0525450;Name=Msa0525450-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|13|0|542 |
| chr3_4 | exon | 78965971 | 78966081 | 78965971 | ID=Msa0525450-mRNA-1:exon:23603;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78965732 | 78965810 | 78965732 | ID=Msa0525450-mRNA-1:exon:23602;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78965374 | 78965414 | 78965374 | ID=Msa0525450-mRNA-1:exon:23601;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78965172 | 78965250 | 78965172 | ID=Msa0525450-mRNA-1:exon:23600;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78964613 | 78964717 | 78964613 | ID=Msa0525450-mRNA-1:exon:23599;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78963775 | 78963884 | 78963775 | ID=Msa0525450-mRNA-1:exon:23598;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78961952 | 78962133 | 78961952 | ID=Msa0525450-mRNA-1:exon:23597;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78961724 | 78961793 | 78961724 | ID=Msa0525450-mRNA-1:exon:23596;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78961430 | 78961603 | 78961430 | ID=Msa0525450-mRNA-1:exon:23595;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78961216 | 78961320 | 78961216 | ID=Msa0525450-mRNA-1:exon:23594;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78960982 | 78961113 | 78960982 | ID=Msa0525450-mRNA-1:exon:23593;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78960789 | 78960884 | 78960789 | ID=Msa0525450-mRNA-1:exon:23592;Parent=Msa0525450-mRNA-1 |
| chr3_4 | exon | 78960348 | 78960692 | 78960348 | ID=Msa0525450-mRNA-1:exon:23591;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78965971 | 78966081 | 78965971 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78965732 | 78965810 | 78965732 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78965374 | 78965414 | 78965374 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78965172 | 78965250 | 78965172 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78964613 | 78964717 | 78964613 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78963775 | 78963884 | 78963775 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78961952 | 78962133 | 78961952 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78961724 | 78961793 | 78961724 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78961430 | 78961603 | 78961430 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78961216 | 78961320 | 78961216 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78960982 | 78961113 | 78960982 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78960789 | 78960884 | 78960789 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| chr3_4 | CDS | 78960348 | 78960692 | 78960348 | ID=Msa0525450-mRNA-1:cds;Parent=Msa0525450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
