Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470370 | XP_003602055.1 | 98.893 | 542 | 6 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1088 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470370 | sp|Q8H4H5|NRAM5_ORYSJ | 70.825 | 521 | 138 | 4 | 29 | 538 | 21 | 538 | 0.0 | 733 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470370 | G7LGK5 | 98.893 | 542 | 6 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1088 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012820 | Msa0470370 | 0.805357 | 1.388430e-49 | -8.615850e-47 |
| Msa0036230 | Msa0470370 | 0.832107 | 1.141834e-55 | -8.615850e-47 |
| Msa0048950 | Msa0470370 | 0.814120 | 1.811333e-51 | -8.615850e-47 |
| Msa0059880 | Msa0470370 | 0.809660 | 1.695124e-50 | -8.615850e-47 |
| Msa0061600 | Msa0470370 | 0.827947 | 1.180859e-54 | -8.615850e-47 |
| Msa0084160 | Msa0470370 | 0.803795 | 2.939624e-49 | -8.615850e-47 |
| Msa0106120 | Msa0470370 | 0.850003 | 2.247919e-60 | -8.615850e-47 |
| Msa0106130 | Msa0470370 | 0.818729 | 1.683664e-52 | -8.615850e-47 |
| Msa0139460 | Msa0470370 | 0.811298 | 7.508641e-51 | -8.615850e-47 |
| Msa0139720 | Msa0470370 | 0.866169 | 3.470478e-65 | -8.615850e-47 |
| Msa0152740 | Msa0470370 | 0.812633 | 3.842523e-51 | -8.615850e-47 |
| Msa0197750 | Msa0470370 | 0.848503 | 5.879115e-60 | -8.615850e-47 |
| Msa0374130 | Msa0470370 | 0.802510 | 5.421490e-49 | -8.615850e-47 |
| Msa0374520 | Msa0470370 | 0.854611 | 1.097100e-61 | -8.615850e-47 |
| Msa0374650 | Msa0470370 | 0.876629 | 1.199363e-68 | -8.615850e-47 |
| Msa0418000 | Msa0470370 | -0.809650 | 1.704102e-50 | -8.615850e-47 |
| Msa0423680 | Msa0470370 | 0.985548 | 6.564655e-164 | -8.615850e-47 |
| Msa0469550 | Msa0470370 | 0.820973 | 5.168424e-53 | -8.615850e-47 |
| Msa0470370 | Msa0515260 | 0.823635 | 1.245676e-53 | -8.615850e-47 |
| Msa0470370 | Msa0525450 | 0.893912 | 4.037642e-75 | -8.615850e-47 |
| Msa0470370 | Msa0543740 | 0.814569 | 1.441398e-51 | -8.615850e-47 |
| Msa0470370 | Msa0548820 | 0.809745 | 1.625714e-50 | -8.615850e-47 |
| Msa0470370 | Msa0548970 | 0.830708 | 2.522415e-55 | -8.615850e-47 |
| Msa0470370 | Msa0599600 | 0.801403 | 9.152943e-49 | -8.615850e-47 |
| Msa0470370 | Msa0605460 | 0.821900 | 3.157783e-53 | -8.615850e-47 |
| Msa0470370 | Msa0646040 | 0.829040 | 6.428568e-55 | -8.615850e-47 |
| Msa0470370 | Msa0678620 | 0.800637 | 1.312495e-48 | -8.615850e-47 |
| Msa0470370 | Msa0684590 | 0.801172 | 1.020697e-48 | -8.615850e-47 |
| Msa0470370 | Msa0684600 | 0.806544 | 7.811471e-50 | -8.615850e-47 |
| Msa0470370 | Msa0684720 | 0.814150 | 1.783823e-51 | -8.615850e-47 |
| Msa0470370 | Msa0735280 | 0.841706 | 4.037240e-58 | -8.615850e-47 |
| Msa0470370 | Msa0796430 | 0.867125 | 1.722866e-65 | -8.615850e-47 |
| Msa0470370 | Msa0811000 | -0.806841 | 6.762441e-50 | -8.615850e-47 |
| Msa0470370 | Msa0834270 | 0.870210 | 1.733851e-66 | -8.615850e-47 |
| Msa0470370 | Msa0862020 | -0.807877 | 4.077340e-50 | -8.615850e-47 |
| Msa0470370 | Msa0883640 | 0.824824 | 6.546159e-54 | -8.615850e-47 |
| Msa0470370 | Msa0910830 | 0.828094 | 1.088240e-54 | -8.615850e-47 |
| Msa0470370 | Msa0913550 | 0.816405 | 5.623628e-52 | -8.615850e-47 |
| Msa0470370 | Msa0960090 | 0.825529 | 4.461605e-54 | -8.615850e-47 |
| Msa0470370 | Msa0967820 | 0.820907 | 5.351279e-53 | -8.615850e-47 |
| Msa0470370 | Msa0971880 | 0.812836 | 3.468658e-51 | -8.615850e-47 |
| Msa0470370 | Msa0985700 | 0.825920 | 3.603358e-54 | -8.615850e-47 |
| Msa0470370 | Msa1061670 | 0.818380 | 2.019874e-52 | -8.615850e-47 |
| Msa0470370 | Msa1079610 | -0.801442 | 8.988757e-49 | -8.615850e-47 |
| Msa0470370 | Msa1106960 | 0.816136 | 6.460654e-52 | -8.615850e-47 |
| Msa0470370 | Msa1109890 | 0.824845 | 6.471401e-54 | -8.615850e-47 |
| Msa0470370 | Msa1112730 | 0.811147 | 8.097267e-51 | -8.615850e-47 |
| Msa0470370 | Msa1132560 | 0.868968 | 4.399892e-66 | -8.615850e-47 |
| Msa0470370 | Msa1207480 | 0.815275 | 1.005014e-51 | -8.615850e-47 |
| Msa0470370 | Msa1216600 | 0.803621 | 3.194203e-49 | -8.615850e-47 |
| Msa0470370 | Msa1233650 | 0.815169 | 1.061044e-51 | -8.615850e-47 |
| Msa0470370 | Msa1269050 | 0.806264 | 8.949723e-50 | -8.615850e-47 |
| Msa0470370 | Msa1287160 | -0.805827 | 1.106025e-49 | -8.615850e-47 |
| Msa0470370 | Msa1296870 | 0.826474 | 2.659001e-54 | -8.615850e-47 |
| Msa0470370 | Msa1314710 | 0.811282 | 7.568812e-51 | -8.615850e-47 |
| Msa0470370 | Msa1319290 | 0.801443 | 8.984055e-49 | -8.615850e-47 |
| Msa0470370 | Msa1323160 | 0.836688 | 8.081434e-57 | -8.615850e-47 |
| Msa0470370 | Msa1357490 | 0.813579 | 2.382743e-51 | -8.615850e-47 |
| Msa0470370 | Msa1380490 | 0.813455 | 2.537513e-51 | -8.615850e-47 |
| Msa0470370 | Msa1393440 | 0.816954 | 4.236012e-52 | -8.615850e-47 |
| Msa0470370 | Msa1395690 | 0.803529 | 3.337379e-49 | -8.615850e-47 |
| Msa0470370 | Msa1411550 | 0.803677 | 3.110448e-49 | -8.615850e-47 |
| Msa0470370 | Msa1413090 | 0.817381 | 3.395885e-52 | -8.615850e-47 |
| Msa0470370 | Msa1445900 | 0.804773 | 1.838817e-49 | -8.615850e-47 |
| Msa0470370 | Msa1459610 | 0.828495 | 8.710824e-55 | -8.615850e-47 |
| Msa0242700 | Msa0470370 | 0.841161 | 5.620861e-58 | -8.615850e-47 |
| Msa0266650 | Msa0470370 | 0.801193 | 1.010521e-48 | -8.615850e-47 |
| Msa0277280 | Msa0470370 | 0.835956 | 1.240622e-56 | -8.615850e-47 |
| Msa0291750 | Msa0470370 | 0.817580 | 3.063874e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470370 | MtrunA17_Chr3g0124971 | 98.893 | 542 | 6 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1088 |
| Msa0470370 | MtrunA17_Chr3g0124991 | 81.800 | 511 | 89 | 1 | 28 | 538 | 25 | 531 | 0.0 | 863 |
| Msa0470370 | MtrunA17_Chr2g0333811 | 58.674 | 513 | 202 | 3 | 31 | 538 | 30 | 537 | 0.0 | 617 |
| Msa0470370 | MtrunA17_Chr3g0134491 | 41.632 | 478 | 243 | 9 | 18 | 487 | 55 | 504 | 4.11e-110 | 338 |
| Msa0470370 | MtrunA17_Chr4g0053701 | 39.804 | 510 | 266 | 10 | 10 | 506 | 29 | 510 | 4.46e-107 | 330 |
| Msa0470370 | MtrunA17_Chr5g0401611 | 40.041 | 487 | 265 | 9 | 10 | 487 | 22 | 490 | 4.95e-106 | 327 |
| Msa0470370 | MtrunA17_Chr8g0347551 | 40.132 | 456 | 247 | 8 | 41 | 487 | 83 | 521 | 1.58e-98 | 309 |
| Msa0470370 | MtrunA17_Chr7g0264231 | 27.700 | 426 | 250 | 10 | 43 | 448 | 31 | 418 | 5.81e-36 | 143 |
| Msa0470370 | MtrunA17_Chr2g0309271 | 27.882 | 373 | 245 | 10 | 89 | 454 | 6 | 361 | 3.55e-34 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470370 | AT1G15960.1 | 57.649 | 536 | 204 | 4 | 5 | 538 | 4 | 518 | 0.0 | 616 |
| Msa0470370 | AT1G80830.1 | 59.960 | 502 | 198 | 2 | 18 | 516 | 18 | 519 | 0.0 | 611 |
| Msa0470370 | AT1G80830.2 | 59.960 | 502 | 198 | 2 | 18 | 516 | 18 | 519 | 0.0 | 611 |
| Msa0470370 | AT1G47240.1 | 40.323 | 496 | 263 | 10 | 2 | 487 | 31 | 503 | 1.32e-110 | 340 |
| Msa0470370 | AT5G67330.1 | 42.731 | 454 | 242 | 7 | 38 | 483 | 46 | 489 | 6.18e-109 | 335 |
| Msa0470370 | AT2G23150.1 | 42.237 | 438 | 225 | 7 | 23 | 452 | 47 | 464 | 1.37e-105 | 326 |
| Msa0470370 | AT4G18790.1 | 39.917 | 481 | 255 | 11 | 24 | 487 | 42 | 505 | 4.88e-98 | 307 |
| Msa0470370 | AT5G03280.1 | 28.297 | 417 | 266 | 9 | 50 | 454 | 24 | 419 | 1.57e-38 | 151 |
Find 143 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACGTGGGTTTGCATTGC+TGG | 0.156547 | 3_3:-72455803 | None:intergenic |
| TCTATCATTGGTGGTTCTTC+TGG | 0.194282 | 3_3:+72455238 | Msa0470370:CDS |
| ATAGAGAAAATTACTATTTC+CGG | 0.208449 | 3_3:-72450581 | None:intergenic |
| GTTGTTGCTATAGGGTTTCT+TGG | 0.220130 | 3_3:+72455144 | Msa0470370:intron |
| TGCAAAGCTGATGATATTTC+TGG | 0.243526 | 3_3:+72454760 | Msa0470370:CDS |
| TTGCTGTGGATCATACTTAT+TGG | 0.253071 | 3_3:+72451074 | Msa0470370:CDS |
| AGGCGATGCTATTGCCCTTT+TGG | 0.259932 | 3_3:+72454280 | Msa0470370:CDS |
| AGCACCATTTCCGCTGAGTT+TGG | 0.266992 | 3_3:-72454255 | None:intergenic |
| CATTATCATCTCATGGATAC+TGG | 0.284916 | 3_3:+72455580 | Msa0470370:CDS |
| GCTCATTGTGTTTCCTCTAA+TGG | 0.296660 | 3_3:+72455703 | Msa0470370:CDS |
| GCCGTTAATGTGACCCCTTC+TGG | 0.300443 | 3_3:+72450285 | Msa0470370:CDS |
| GGTTTGTGAAATACTGCTTA+TGG | 0.301334 | 3_3:+72451592 | Msa0470370:CDS |
| CTCTGCTTCTTTCCTTCTCC+AGG | 0.303394 | 3_3:+72454819 | Msa0470370:CDS |
| GAGGAATCATCATGGTTATA+AGG | 0.307736 | 3_3:-72450315 | None:intergenic |
| CATCTCATGGATACTGGGTT+TGG | 0.307770 | 3_3:+72455586 | Msa0470370:CDS |
| TGGGGAGGGGTTCTGTTGAC+TGG | 0.325047 | 3_3:+72452433 | Msa0470370:CDS |
| GTAATGGCTGCATGTTTCTT+TGG | 0.335836 | 3_3:+72454176 | Msa0470370:CDS |
| CAATCATTGGCTGCAAATCT+TGG | 0.340580 | 3_3:+72451119 | Msa0470370:CDS |
| AAATAACCTGCATGATAAAC+TGG | 0.343150 | 3_3:-72455039 | None:intergenic |
| TCAGCTAAATCTTCTCTATA+AGG | 0.348732 | 3_3:-72455869 | None:intergenic |
| TGCCTGCATAATTCAATCAT+TGG | 0.362553 | 3_3:+72451106 | Msa0470370:CDS |
| CCCTCAATTACTCCTTTAGC+AGG | 0.370812 | 3_3:-72454221 | None:intergenic |
| GAAGGAAAGAAGCAGAGTTA+AGG | 0.373155 | 3_3:-72454813 | None:intergenic |
| TAGAGAAAATTACTATTTCC+GGG | 0.385584 | 3_3:-72450580 | None:intergenic |
| AAGGAAAGAAGCAGAGTTAA+GGG | 0.387403 | 3_3:-72454812 | None:intergenic |
| GTTCCCAAACTCAGCGGAAA+TGG | 0.392437 | 3_3:+72454251 | Msa0470370:CDS |
| TCACATTAACGGCTACTATA+CGG | 0.394700 | 3_3:-72450275 | None:intergenic |
| CCACGTGGGTTTGCATTGCT+GGG | 0.394721 | 3_3:-72455802 | None:intergenic |
| ATGAACACATTTGCCACCTT+TGG | 0.395316 | 3_3:-72455677 | None:intergenic |
| TACTATTCCACATCCCTGTA+TGG | 0.395695 | 3_3:+72452413 | Msa0470370:CDS |
| ACGATATACAGTGCCATTAG+AGG | 0.404675 | 3_3:-72455716 | None:intergenic |
| AATGCAAACCCACGTGGAAA+AGG | 0.405954 | 3_3:+72455808 | Msa0470370:CDS |
| GCACCATTTCCGCTGAGTTT+GGG | 0.410514 | 3_3:-72454254 | None:intergenic |
| ATGCAAACCCACGTGGAAAA+GGG | 0.414972 | 3_3:+72455809 | Msa0470370:CDS |
| AATATATATACGGCATGATA+AGG | 0.422603 | 3_3:-72454307 | None:intergenic |
| TTCAATTCTAGTATTTGTAA+TGG | 0.429820 | 3_3:+72454160 | Msa0470370:CDS |
| GCACATCAAGAAGTGAATAA+TGG | 0.430235 | 3_3:+72450243 | Msa0470370:CDS |
| ATCTCATGGATACTGGGTTT+GGG | 0.430375 | 3_3:+72455587 | Msa0470370:CDS |
| TTCTTGGCATATGTAGGTCC+TGG | 0.432693 | 3_3:+72450529 | Msa0470370:CDS |
| CTCAATTACTCCTTTAGCAG+GGG | 0.433628 | 3_3:-72454219 | None:intergenic |
| ATACTGGGTTTGGGAATCAT+TGG | 0.437838 | 3_3:+72455596 | Msa0470370:CDS |
| AACAGAACCCCTCCCCATAC+AGG | 0.439502 | 3_3:-72452427 | None:intergenic |
| AATTACTATTTCCGGGATCA+AGG | 0.443260 | 3_3:-72450573 | None:intergenic |
| TCCTGCTGCTGCTAAACTTA+AGG | 0.444508 | 3_3:-72455427 | None:intergenic |
| TAGTACCTGATCTTGCTTTG+AGG | 0.445138 | 3_3:-72450334 | None:intergenic |
| GCCAAGAACTTCTTCCATCC+TGG | 0.450214 | 3_3:-72450514 | None:intergenic |
| ATTGGTGGTTCTTCTGGAGC+TGG | 0.453884 | 3_3:+72455244 | Msa0470370:CDS |
| TGTAACGTTTGTGGAGGTTA+AGG | 0.455588 | 3_3:+72455775 | Msa0470370:CDS |
| GCATGATAAGGGCACCCAAA+AGG | 0.457391 | 3_3:-72454295 | None:intergenic |
| ACCAGGATGGAAGAAGTTCT+TGG | 0.460018 | 3_3:+72450513 | Msa0470370:CDS |
| AGTCTAGTTGTATCTATCAT+TGG | 0.463106 | 3_3:+72455226 | Msa0470370:CDS |
| GCCAGAAGGGGTCACATTAA+CGG | 0.463878 | 3_3:-72450286 | None:intergenic |
| GCCATCACTGGAACCTATGC+AGG | 0.467177 | 3_3:+72455016 | Msa0470370:CDS |
| TCCTTAAGTTTAGCAGCAGC+AGG | 0.474703 | 3_3:+72455426 | Msa0470370:CDS |
| AGACACTGTTGTAACGTTTG+TGG | 0.479496 | 3_3:+72455766 | Msa0470370:CDS |
| ATATATATACGGCATGATAA+GGG | 0.481081 | 3_3:-72454306 | None:intergenic |
| AGGTGGCAAATGTGTTCATC+GGG | 0.481596 | 3_3:+72455681 | Msa0470370:CDS |
| TCCACATCCCTGTATGGGGA+GGG | 0.483367 | 3_3:+72452419 | Msa0470370:CDS |
| GGACAAAGTTCTGCCATCAC+TGG | 0.489514 | 3_3:+72455004 | Msa0470370:CDS |
| CATGATAAGGGCACCCAAAA+GGG | 0.490780 | 3_3:-72454294 | None:intergenic |
| AGCCAATGATTGAATTATGC+AGG | 0.491531 | 3_3:-72451108 | None:intergenic |
| AATTGATCGTGGCAGTGATT+GGG | 0.494980 | 3_3:+72452371 | Msa0470370:intron |
| TGCAGGCCAGTTTATCATGC+AGG | 0.497043 | 3_3:+72455033 | Msa0470370:CDS |
| CCACATCCCTGTATGGGGAG+GGG | 0.502179 | 3_3:+72452420 | Msa0470370:CDS |
| GATGTCGATTAGAATGTGTT+GGG | 0.506492 | 3_3:+72454938 | Msa0470370:intron |
| GGGGAGGGGTTCTGTTGACT+GGG | 0.512702 | 3_3:+72452434 | Msa0470370:CDS |
| GCCATAGCATTGCTAGCCTC+AGG | 0.513448 | 3_3:+72454983 | Msa0470370:CDS |
| TGGAGCTAACCACGGATATG+AGG | 0.513573 | 3_3:+72450929 | Msa0470370:CDS |
| CAGCTTTACAAATTTCTGAA+AGG | 0.514902 | 3_3:-72451560 | None:intergenic |
| ATTCTTGTGAGGTCCCATCT+TGG | 0.520680 | 3_3:-72455450 | None:intergenic |
| TACAACTAGACTTGGTGCTA+TGG | 0.521234 | 3_3:-72455215 | None:intergenic |
| TATAAGGAGGTGTGCCAGAA+GGG | 0.523324 | 3_3:-72450299 | None:intergenic |
| GGATAAGGAACTTGGTGACT+AGG | 0.528011 | 3_3:+72455185 | Msa0470370:CDS |
| CTAGTTGTATCTATCATTGG+TGG | 0.528310 | 3_3:+72455229 | Msa0470370:CDS |
| TGCAGATCATTATCATCTCA+TGG | 0.528542 | 3_3:+72455573 | Msa0470370:intron |
| TGATTCCTCAAAGCAAGATC+AGG | 0.528741 | 3_3:+72450329 | Msa0470370:CDS |
| ATTATCATCTCATGGATACT+GGG | 0.533025 | 3_3:+72455581 | Msa0470370:CDS |
| GTGGAAACTGATTTGCAAGC+TGG | 0.533541 | 3_3:+72450909 | Msa0470370:intron |
| GATGATACAGGTGAGGAAGT+TGG | 0.533925 | 3_3:+72454127 | Msa0470370:intron |
| AAGGTGGCAAATGTGTTCAT+CGG | 0.535021 | 3_3:+72455680 | Msa0470370:CDS |
| CCTGCTAAAGGAGTAATTGA+GGG | 0.537944 | 3_3:+72454221 | Msa0470370:CDS |
| TAGCAGCAGCAGGACCAAGA+TGG | 0.540609 | 3_3:+72455436 | Msa0470370:CDS |
| GCAAATCTTGGAGTGTGCAC+TGG | 0.541003 | 3_3:+72451131 | Msa0470370:CDS |
| TCCTTGGCCTACCTTGATCC+CGG | 0.541201 | 3_3:+72450562 | Msa0470370:CDS |
| ACTATTCCACATCCCTGTAT+GGG | 0.541340 | 3_3:+72452414 | Msa0470370:CDS |
| TTTGTAAAGCTGAGTACCCA+TGG | 0.542389 | 3_3:+72451571 | Msa0470370:CDS |
| TCCTGAGGCTAGCAATGCTA+TGG | 0.543434 | 3_3:-72454984 | None:intergenic |
| TCAATTACTCCTTTAGCAGG+GGG | 0.546528 | 3_3:-72454218 | None:intergenic |
| TGATGTCGATTAGAATGTGT+TGG | 0.550289 | 3_3:+72454937 | Msa0470370:intron |
| CCTCAATTACTCCTTTAGCA+GGG | 0.550345 | 3_3:-72454220 | None:intergenic |
| CATGATAAACTGGCCTGCAT+AGG | 0.550503 | 3_3:-72455029 | None:intergenic |
| CCCCTCCCCATACAGGGATG+TGG | 0.550519 | 3_3:-72452420 | None:intergenic |
| AAGACTCATTATCATTGCAT+CGG | 0.550734 | 3_3:+72455267 | Msa0470370:CDS |
| AGGAGTGGAATTAAAGCGAA+TGG | 0.550794 | 3_3:-72455407 | None:intergenic |
| AAGCAGTATTTCACAAACCA+TGG | 0.552975 | 3_3:-72451588 | None:intergenic |
| CTTGCTTTGAGGAATCATCA+TGG | 0.559790 | 3_3:-72450323 | None:intergenic |
| AGCAGCAGCAGGACCAAGAT+GGG | 0.560663 | 3_3:+72455437 | Msa0470370:CDS |
| TCTGATGTATTCAGTTGCTG+TGG | 0.561445 | 3_3:+72451060 | Msa0470370:intron |
| CCCTGCTAAAGGAGTAATTG+AGG | 0.561586 | 3_3:+72454220 | Msa0470370:CDS |
| ACTCACAACCTAGGTCCCTC+TGG | 0.563330 | 3_3:-72455902 | None:intergenic |
| GCCTGCATAGGTTCCAGTGA+TGG | 0.566805 | 3_3:-72455017 | None:intergenic |
| CACTGTTGTAACGTTTGTGG+AGG | 0.573180 | 3_3:+72455769 | Msa0470370:CDS |
| CTCAGCGGAAATGGTGCTGT+AGG | 0.574279 | 3_3:+72454260 | Msa0470370:CDS |
| TGCAAACCCACGTGGAAAAG+GGG | 0.579067 | 3_3:+72455810 | Msa0470370:CDS |
| TTCCACATCCCTGTATGGGG+AGG | 0.579702 | 3_3:+72452418 | Msa0470370:CDS |
| TCCGGGATCAAGGTAGGCCA+AGG | 0.580113 | 3_3:-72450563 | None:intergenic |
| TTGATGCCACGCTTAGTACC+AGG | 0.584278 | 3_3:-72454523 | None:intergenic |
| ACTATTTCCGGGATCAAGGT+AGG | 0.587421 | 3_3:-72450569 | None:intergenic |
| AACCCACAAAAGCAGTAATG+AGG | 0.591854 | 3_3:-72455634 | None:intergenic |
| AGATACTTTCTCATTGAGAG+TGG | 0.591903 | 3_3:+72454676 | Msa0470370:CDS |
| GTTGCAATGATTTCTGTGAC+TGG | 0.594533 | 3_3:+72454730 | Msa0470370:CDS |
| CATTGATGAAAACAGAAACC+AGG | 0.596835 | 3_3:+72450496 | Msa0470370:intron |
| TCACTCGACCAGAGGGACCT+AGG | 0.597228 | 3_3:+72455894 | Msa0470370:CDS |
| CTGCATTTGACTCACAACCT+AGG | 0.601238 | 3_3:-72455911 | None:intergenic |
| TTATAAGGAGGTGTGCCAGA+AGG | 0.602066 | 3_3:-72450300 | None:intergenic |
| GAATAGTATGTTTAGTGCAA+AGG | 0.605048 | 3_3:-72452398 | None:intergenic |
| ATGATAGATACAACTAGACT+TGG | 0.605967 | 3_3:-72455223 | None:intergenic |
| GAGATAGCACTAGAGCAGAA+TGG | 0.606849 | 3_3:-72454492 | None:intergenic |
| TCATAACAGTCTACCAAAGG+TGG | 0.609151 | 3_3:+72455664 | Msa0470370:CDS |
| TTTGGGTCTACAAAGATTTG+GGG | 0.611662 | 3_3:+72452474 | Msa0470370:CDS |
| GCCAAGGAGACAAGAAAACC+AGG | 0.612129 | 3_3:-72450547 | None:intergenic |
| AAGAAGTTCTTGGCATATGT+AGG | 0.614916 | 3_3:+72450523 | Msa0470370:CDS |
| ACAGAACCCCTCCCCATACA+GGG | 0.617014 | 3_3:-72452426 | None:intergenic |
| AGCTGATATCACTCGACCAG+AGG | 0.619373 | 3_3:+72455886 | Msa0470370:CDS |
| CTATTCCACATCCCTGTATG+GGG | 0.625216 | 3_3:+72452415 | Msa0470370:CDS |
| ATAAGGAGGTGTGCCAGAAG+GGG | 0.630304 | 3_3:-72450298 | None:intergenic |
| AAAATACCTGGTACTAAGCG+TGG | 0.631107 | 3_3:+72454517 | Msa0470370:CDS |
| AGCAGTATTTCACAAACCAT+GGG | 0.631884 | 3_3:-72451587 | None:intergenic |
| GCTGATATCACTCGACCAGA+GGG | 0.635396 | 3_3:+72455887 | Msa0470370:CDS |
| CTGCTGCTAAACTTAAGGAG+TGG | 0.639448 | 3_3:-72455422 | None:intergenic |
| ACTAAATTAGAACCTGGAGA+AGG | 0.648262 | 3_3:-72454831 | None:intergenic |
| AATTCATAACAGTCTACCAA+AGG | 0.650188 | 3_3:+72455661 | Msa0470370:CDS |
| ATAGCTGCAGACATACCTGA+AGG | 0.662081 | 3_3:+72451636 | Msa0470370:CDS |
| GATGAAAACAGAAACCAGGA+TGG | 0.662101 | 3_3:+72450500 | Msa0470370:intron |
| GATCGTGGCAGTGATTGGGA+CGG | 0.663462 | 3_3:+72452375 | Msa0470370:intron |
| GATGGCAGAACTTTGTCCTG+AGG | 0.667648 | 3_3:-72454999 | None:intergenic |
| GAATCATCATGGTTATAAGG+AGG | 0.667714 | 3_3:-72450312 | None:intergenic |
| CCCAGCAATGCAAACCCACG+TGG | 0.668954 | 3_3:+72455802 | Msa0470370:CDS |
| ACAATGATAGAATTCTTGTG+AGG | 0.669610 | 3_3:-72455461 | None:intergenic |
| GAAAAGGGGTTCGTAAACGA+TGG | 0.672922 | 3_3:+72455824 | Msa0470370:CDS |
| ATGTTTGTTCCCAAACTCAG+CGG | 0.678012 | 3_3:+72454245 | Msa0470370:CDS |
| ATAGCACTAGAGCAGAATGG+AGG | 0.685112 | 3_3:-72454489 | None:intergenic |
| TTGCAAGCTGGAGCTAACCA+CGG | 0.687380 | 3_3:+72450921 | Msa0470370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATATATATTTAATTA+AGG | - | chr3_3:72452838-72452857 | None:intergenic | 0.0% |
| !!! | CAATTATTATTATTTTTCAA+TGG | - | chr3_3:72451028-72451047 | None:intergenic | 10.0% |
| !! | AGTTAATCAAATAATAATAT+TGG | + | chr3_3:72451389-72451408 | Msa0470370:intron | 10.0% |
| !!! | TCAAACTATAAATTATATTT+TGG | + | chr3_3:72453513-72453532 | Msa0470370:intron | 10.0% |
| !!! | TATTATTTTTTAACAATCAA+TGG | + | chr3_3:72453555-72453574 | Msa0470370:intron | 10.0% |
| !!! | TTAAAGTCTACTTTTTTTTT+TGG | + | chr3_3:72450403-72450422 | Msa0470370:intron | 15.0% |
| !! | TATATGAATATACTATGATA+TGG | - | chr3_3:72451348-72451367 | None:intergenic | 15.0% |
| !! | ATTATTTGATTAACTAACTT+AGG | - | chr3_3:72451384-72451403 | None:intergenic | 15.0% |
| !!! | TTTAATGGTTTTGATTATAA+AGG | - | chr3_3:72451701-72451720 | None:intergenic | 15.0% |
| !! | TATTGATGAGTTAAATTTAA+TGG | - | chr3_3:72451716-72451735 | None:intergenic | 15.0% |
| !!! | TATTGAAATTTAAGTTTGAA+CGG | + | chr3_3:72452021-72452040 | Msa0470370:intron | 15.0% |
| !! | TGTATATATAGAAGATAAAT+AGG | - | chr3_3:72452339-72452358 | None:intergenic | 15.0% |
| !! | TTGTATATGATCTTATATTT+AGG | + | chr3_3:72452942-72452961 | Msa0470370:intron | 15.0% |
| !! | TGTATATGATCTTATATTTA+GGG | + | chr3_3:72452943-72452962 | Msa0470370:intron | 15.0% |
| !! | AAAAAAAAAGAATGCTTAAA+CGG | - | chr3_3:72453022-72453041 | None:intergenic | 15.0% |
| !! | AATATGTGTATTTATTGTAT+TGG | - | chr3_3:72453188-72453207 | None:intergenic | 15.0% |
| !! | TCATAAAAACATATTTAAAG+AGG | + | chr3_3:72453209-72453228 | Msa0470370:intron | 15.0% |
| !! | CATAAAAACATATTTAAAGA+GGG | + | chr3_3:72453210-72453229 | Msa0470370:intron | 15.0% |
| !! | AGACAATAATTAATATGTTT+AGG | - | chr3_3:72453444-72453463 | None:intergenic | 15.0% |
| !! | ATATTGTAATATGTAAAAGT+TGG | + | chr3_3:72453630-72453649 | Msa0470370:intron | 15.0% |
| !! | TATTGTAATATGTAAAAGTT+GGG | + | chr3_3:72453631-72453650 | Msa0470370:intron | 15.0% |
| !! | ATTAAAATAGTCAATGTAAT+GGG | - | chr3_3:72453939-72453958 | None:intergenic | 15.0% |
| !! | ATCGAATTTAATGTAAAATT+AGG | - | chr3_3:72454412-72454431 | None:intergenic | 15.0% |
| !! | ATATATTTAATTGATTATGC+AGG | + | chr3_3:72454645-72454664 | Msa0470370:intron | 15.0% |
| !!! | AACTTAAAAGTTTTAGTATA+AGG | + | chr3_3:72455095-72455114 | Msa0470370:intron | 15.0% |
| !!! | AGTAGACTTTAACTTAATTA+GGG | - | chr3_3:72450395-72450414 | None:intergenic | 20.0% |
| !!! | AAGTAGACTTTAACTTAATT+AGG | - | chr3_3:72450396-72450415 | None:intergenic | 20.0% |
| !! | ATAGAGAAAATTACTATTTC+CGG | - | chr3_3:72450584-72450603 | None:intergenic | 20.0% |
| !!! | TTTTTGATTATAATAGTGAC+CGG | - | chr3_3:72450636-72450655 | None:intergenic | 20.0% |
| !!! | TCAATTAATGATGATGTATA+TGG | + | chr3_3:72450674-72450693 | Msa0470370:intron | 20.0% |
| !!! | TTTTTGCTTATAATAGTGTT+CGG | + | chr3_3:72450749-72450768 | Msa0470370:intron | 20.0% |
| !! | AATATAAAACCTTACAAAGT+TGG | + | chr3_3:72451311-72451330 | Msa0470370:intron | 20.0% |
| !! | ATATAAAACCTTACAAAGTT+GGG | + | chr3_3:72451312-72451331 | Msa0470370:intron | 20.0% |
| !!! | TTGTGAAAACTATTTTAGAT+AGG | - | chr3_3:72451439-72451458 | None:intergenic | 20.0% |
| !! | GAACAACAAATATCAAATAA+TGG | - | chr3_3:72451521-72451540 | None:intergenic | 20.0% |
| !! | TGATTATAAAGGAAAAAACA+AGG | - | chr3_3:72451690-72451709 | None:intergenic | 20.0% |
| !!! | ATGTATTTTAGTCATTTACA+TGG | + | chr3_3:72451946-72451965 | Msa0470370:intron | 20.0% |
| !! | TATTAAAATTCAAGCATGAA+TGG | + | chr3_3:72452098-72452117 | Msa0470370:intron | 20.0% |
| !! | TAATGTTATAAAATTGATCG+TGG | + | chr3_3:72452360-72452379 | Msa0470370:intron | 20.0% |
| !! | CAGGTATTAAAAAAAATTGT+TGG | + | chr3_3:72452770-72452789 | Msa0470370:intron | 20.0% |
| !! | TATAAATTACTCCCATAAAA+AGG | + | chr3_3:72452978-72452997 | Msa0470370:intron | 20.0% |
| !! | ATAAATTACTCCCATAAAAA+GGG | + | chr3_3:72452979-72452998 | Msa0470370:intron | 20.0% |
| !!! | TAAGCATTCTTTTTTTTTTG+TGG | + | chr3_3:72453024-72453043 | Msa0470370:intron | 20.0% |
| !!! | ATTGATTTAGAATGCTTAAA+CGG | - | chr3_3:72453125-72453144 | None:intergenic | 20.0% |
| !! | TATCATGAGATATTGTTTAA+GGG | - | chr3_3:72453407-72453426 | None:intergenic | 20.0% |
| !! | ATTGTAATATGTAAAAGTTG+GGG | + | chr3_3:72453632-72453651 | Msa0470370:intron | 20.0% |
| !!! | TTTTTTTTTGTCAAGTAACA+TGG | - | chr3_3:72453702-72453721 | None:intergenic | 20.0% |
| !! | ATATTAATGAGCTACATTAA+AGG | - | chr3_3:72453867-72453886 | None:intergenic | 20.0% |
| !! | TTAAAATAGTCAATGTAATG+GGG | - | chr3_3:72453938-72453957 | None:intergenic | 20.0% |
| !! | GATTAAAATAGTCAATGTAA+TGG | - | chr3_3:72453940-72453959 | None:intergenic | 20.0% |
| !! | TTCAATTCTAGTATTTGTAA+TGG | + | chr3_3:72454160-72454179 | Msa0470370:CDS | 20.0% |
| !! | TTATTGAAGTAAAAGAAAAG+AGG | - | chr3_3:72454339-72454358 | None:intergenic | 20.0% |
| !! | TATATGAGTTTATTTCACTT+GGG | - | chr3_3:72454556-72454575 | None:intergenic | 20.0% |
| !! | ATATATGAGTTTATTTCACT+TGG | - | chr3_3:72454557-72454576 | None:intergenic | 20.0% |
| !! | TAAAGATGAAAAAATGGATA+AGG | + | chr3_3:72455170-72455189 | Msa0470370:CDS | 20.0% |
| ! | TGTACAATATTAGTTCCAAA+CGG | - | chr3_3:72450436-72450455 | None:intergenic | 25.0% |
| ! | TAGAGAAAATTACTATTTCC+GGG | - | chr3_3:72450583-72450602 | None:intergenic | 25.0% |
| ! | GTGATATTATATACACTATC+CGG | + | chr3_3:72450614-72450633 | Msa0470370:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr3_3:72450712-72450731 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTCAAATTTTGAC+AGG | + | chr3_3:72451531-72451550 | Msa0470370:intron | 25.0% |
| ! | GTGATGTACATGTAAATAAA+TGG | - | chr3_3:72451820-72451839 | None:intergenic | 25.0% |
| !!! | TTGAACGGTTAGTTTTATAT+CGG | + | chr3_3:72452036-72452055 | Msa0470370:intron | 25.0% |
| ! | ACGCATCCATATTAAAATAT+TGG | + | chr3_3:72452186-72452205 | Msa0470370:intron | 25.0% |
| !!! | GGACATCCAATATTTTAATA+TGG | - | chr3_3:72452195-72452214 | None:intergenic | 25.0% |
| ! | AACACTATCATATAATGTTG+GGG | - | chr3_3:72452225-72452244 | None:intergenic | 25.0% |
| ! | GAACACTATCATATAATGTT+GGG | - | chr3_3:72452226-72452245 | None:intergenic | 25.0% |
| ! | TGAACACTATCATATAATGT+TGG | - | chr3_3:72452227-72452246 | None:intergenic | 25.0% |
| !!! | CTTTTGATTTTTCCTTTTCA+TGG | + | chr3_3:72452561-72452580 | Msa0470370:intron | 25.0% |
| ! | TACATCAAAATAGTAGAAGT+CGG | - | chr3_3:72452603-72452622 | None:intergenic | 25.0% |
| ! | AAAATGTATAAGCTATGGTT+TGG | - | chr3_3:72452690-72452709 | None:intergenic | 25.0% |
| !! | AAACCATAGCTTATACATTT+TGG | + | chr3_3:72452689-72452708 | Msa0470370:intron | 25.0% |
| ! | ATTCCAAAATGTATAAGCTA+TGG | - | chr3_3:72452695-72452714 | None:intergenic | 25.0% |
| ! | GAGTTGTTTAAAAAAAACAC+AGG | + | chr3_3:72452751-72452770 | Msa0470370:intron | 25.0% |
| ! | AAACATATTTAAAGAGGGAA+TGG | + | chr3_3:72453215-72453234 | Msa0470370:intron | 25.0% |
| ! | TTAATGGTGTAGATGTAAAA+TGG | + | chr3_3:72453344-72453363 | Msa0470370:intron | 25.0% |
| ! | AGATGTAAAATGGAGAAAAA+TGG | + | chr3_3:72453354-72453373 | Msa0470370:intron | 25.0% |
| ! | GTATCATGAGATATTGTTTA+AGG | - | chr3_3:72453408-72453427 | None:intergenic | 25.0% |
| !!! | CAATTTTTTTCCTTTCTCTT+TGG | + | chr3_3:72453723-72453742 | Msa0470370:intron | 25.0% |
| ! | CAAAGTAAATATTGATGAGA+GGG | - | chr3_3:72453990-72454009 | None:intergenic | 25.0% |
| ! | TCAAAGTAAATATTGATGAG+AGG | - | chr3_3:72453991-72454010 | None:intergenic | 25.0% |
| !!! | ATCTCTTAACTTCTACTTTT+TGG | + | chr3_3:72454104-72454123 | Msa0470370:intron | 25.0% |
| !!! | TCTCTTAACTTCTACTTTTT+GGG | + | chr3_3:72454105-72454124 | Msa0470370:intron | 25.0% |
| ! | ATATATATACGGCATGATAA+GGG | - | chr3_3:72454309-72454328 | None:intergenic | 25.0% |
| ! | AATATATATACGGCATGATA+AGG | - | chr3_3:72454310-72454329 | None:intergenic | 25.0% |
| !! | TTTTTCTGACAAAATTATGC+AGG | + | chr3_3:72454455-72454474 | Msa0470370:intron | 25.0% |
| ! | ATATGAGTTTATTTCACTTG+GGG | - | chr3_3:72454555-72454574 | None:intergenic | 25.0% |
| !!! | TATTTTAAGTTTAGCGCTTA+TGG | - | chr3_3:72454585-72454604 | None:intergenic | 25.0% |
| ! | ATGTAAATACTTGCTTGATT+AGG | - | chr3_3:72454901-72454920 | None:intergenic | 25.0% |
| !!! | TATAAGGTGTTGTTAAACTT+GGG | + | chr3_3:72455111-72455130 | Msa0470370:intron | 25.0% |
| ! | TGGACTTAAAGATGAAAAAA+TGG | + | chr3_3:72455164-72455183 | Msa0470370:CDS | 25.0% |
| ! | CTTTATAGTACAAGGAAATA+GGG | - | chr3_3:72455493-72455512 | None:intergenic | 25.0% |
| ! | ACTTTATAGTACAAGGAAAT+AGG | - | chr3_3:72455494-72455513 | None:intergenic | 25.0% |
| ! | TATTTCCTTGTACTATAAAG+TGG | + | chr3_3:72455493-72455512 | Msa0470370:intron | 25.0% |
| !!! | ACATTTTTGGCTTATTTCAA+AGG | - | chr3_3:72455540-72455559 | None:intergenic | 25.0% |
| !! | CCAAAATTATGTCACATTTT+TGG | - | chr3_3:72455553-72455572 | None:intergenic | 25.0% |
| !! | CCAAAAATGTGACATAATTT+TGG | + | chr3_3:72455550-72455569 | Msa0470370:intron | 25.0% |
| !!! | TTTTTTGGAGTTATTCCGTT+TGG | + | chr3_3:72450418-72450437 | Msa0470370:intron | 30.0% |
| !!! | CATATTTGTCATTTTTGCAG+TGG | + | chr3_3:72450890-72450909 | Msa0470370:intron | 30.0% |
| ACAAGAACAAAAGCTCAAAT+AGG | + | chr3_3:72451455-72451474 | Msa0470370:intron | 30.0% | |
| CAGCTTTACAAATTTCTGAA+AGG | - | chr3_3:72451563-72451582 | None:intergenic | 30.0% | |
| GTACATGTAAATAAATGGCA+AGG | - | chr3_3:72451815-72451834 | None:intergenic | 30.0% | |
| ! | CAATATTTTTCCTTGATGTG+AGG | - | chr3_3:72452128-72452147 | None:intergenic | 30.0% |
| CTCACATCAAGGAAAAATAT+TGG | + | chr3_3:72452126-72452145 | Msa0470370:intron | 30.0% | |
| ACACAATCATTCACAGTAAA+AGG | - | chr3_3:72452295-72452314 | None:intergenic | 30.0% | |
| GAATAGTATGTTTAGTGCAA+AGG | - | chr3_3:72452401-72452420 | None:intergenic | 30.0% | |
| !!! | TTTTTGGGTCTACAAAGATT+TGG | + | chr3_3:72452472-72452491 | Msa0470370:CDS | 30.0% |
| !! | TTTTGGGTCTACAAAGATTT+GGG | + | chr3_3:72452473-72452492 | Msa0470370:CDS | 30.0% |
| AAAAGCTAGAAACCATGAAA+AGG | - | chr3_3:72452576-72452595 | None:intergenic | 30.0% | |
| !!! | GCATTCTTTTTTTTTTGTGG+TGG | + | chr3_3:72453027-72453046 | Msa0470370:intron | 30.0% |
| !!! | TCTTTTTTTTTTGTGGTGGT+CGG | + | chr3_3:72453031-72453050 | Msa0470370:intron | 30.0% |
| TATTGTCTTTAATGTCCACT+TGG | + | chr3_3:72453456-72453475 | Msa0470370:intron | 30.0% | |
| TCAAATAAGTGAGAAATCTG+AGG | - | chr3_3:72453664-72453683 | None:intergenic | 30.0% | |
| !! | ACTTATTTTTCATCCGAACT+CGG | - | chr3_3:72453784-72453803 | None:intergenic | 30.0% |
| TAATGAGCTACATTAAAGGA+TGG | - | chr3_3:72453863-72453882 | None:intergenic | 30.0% | |
| GAGGAGGAAGAATATATATA+CGG | - | chr3_3:72454320-72454339 | None:intergenic | 30.0% | |
| TTGAAGTAAAAGAAAAGAGG+AGG | - | chr3_3:72454336-72454355 | None:intergenic | 30.0% | |
| TGTCAGAAAAAAAATCAGCA+AGG | - | chr3_3:72454446-72454465 | None:intergenic | 30.0% | |
| AAGTGAACTAAATTAGAACC+TGG | - | chr3_3:72454840-72454859 | None:intergenic | 30.0% | |
| AGTTCACTTTGCAACTATTA+TGG | + | chr3_3:72454851-72454870 | Msa0470370:intron | 30.0% | |
| AAATAACCTGCATGATAAAC+TGG | - | chr3_3:72455042-72455061 | None:intergenic | 30.0% | |
| !! | GTATAAGGTGTTGTTAAACT+TGG | + | chr3_3:72455110-72455129 | Msa0470370:intron | 30.0% |
| ! | GTTAAACTTGGGTTTTTGTT+TGG | + | chr3_3:72455122-72455141 | Msa0470370:intron | 30.0% |
| !! | TTTTGTTTGGTTGTTGCTAT+AGG | + | chr3_3:72455135-72455154 | Msa0470370:intron | 30.0% |
| TTTGTTTGGTTGTTGCTATA+GGG | + | chr3_3:72455136-72455155 | Msa0470370:intron | 30.0% | |
| GAAAAAATGGATAAGGAACT+TGG | + | chr3_3:72455177-72455196 | Msa0470370:CDS | 30.0% | |
| AAGACTCATTATCATTGCAT+CGG | + | chr3_3:72455267-72455286 | Msa0470370:CDS | 30.0% | |
| ACAATGATAGAATTCTTGTG+AGG | - | chr3_3:72455464-72455483 | None:intergenic | 30.0% | |
| ! | TTCAAAGGCTTTAGCTTAAT+GGG | - | chr3_3:72455525-72455544 | None:intergenic | 30.0% |
| ! | TTTCAAAGGCTTTAGCTTAA+TGG | - | chr3_3:72455526-72455545 | None:intergenic | 30.0% |
| ATTATCATCTCATGGATACT+GGG | + | chr3_3:72455581-72455600 | Msa0470370:CDS | 30.0% | |
| AATTCATAACAGTCTACCAA+AGG | + | chr3_3:72455661-72455680 | Msa0470370:CDS | 30.0% | |
| TCAGCTAAATCTTCTCTATA+AGG | - | chr3_3:72455872-72455891 | None:intergenic | 30.0% | |
| GCACATCAAGAAGTGAATAA+TGG | + | chr3_3:72450243-72450262 | Msa0470370:CDS | 35.0% | |
| TCACATTAACGGCTACTATA+CGG | - | chr3_3:72450278-72450297 | None:intergenic | 35.0% | |
| GAATCATCATGGTTATAAGG+AGG | - | chr3_3:72450315-72450334 | None:intergenic | 35.0% | |
| GAGGAATCATCATGGTTATA+AGG | - | chr3_3:72450318-72450337 | None:intergenic | 35.0% | |
| ! | CTGGTTTCTGTTTTCATCAA+TGG | - | chr3_3:72450498-72450517 | None:intergenic | 35.0% |
| CATTGATGAAAACAGAAACC+AGG | + | chr3_3:72450496-72450515 | Msa0470370:intron | 35.0% | |
| AAGAAGTTCTTGGCATATGT+AGG | + | chr3_3:72450523-72450542 | Msa0470370:CDS | 35.0% | |
| AATTACTATTTCCGGGATCA+AGG | - | chr3_3:72450576-72450595 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGTTCGG+AGG | + | chr3_3:72450752-72450771 | Msa0470370:intron | 35.0% | |
| TGCTTATAATAGTGTTCGGA+GGG | + | chr3_3:72450753-72450772 | Msa0470370:intron | 35.0% | |
| !! | ATTGTTTTACCTCATATCCG+TGG | - | chr3_3:72450941-72450960 | None:intergenic | 35.0% |
| TTGCTGTGGATCATACTTAT+TGG | + | chr3_3:72451074-72451093 | Msa0470370:CDS | 35.0% | |
| TGCCTGCATAATTCAATCAT+TGG | + | chr3_3:72451106-72451125 | Msa0470370:CDS | 35.0% | |
| AGCCAATGATTGAATTATGC+AGG | - | chr3_3:72451111-72451130 | None:intergenic | 35.0% | |
| CTACAACACAACCAAAATTG+AGG | - | chr3_3:72451162-72451181 | None:intergenic | 35.0% | |
| ACTAACTTAGGATAGAGACT+TGG | - | chr3_3:72451372-72451391 | None:intergenic | 35.0% | |
| AAAAGCTCAAATAGGAAACG+TGG | + | chr3_3:72451463-72451482 | Msa0470370:intron | 35.0% | |
| AAAGCTCAAATAGGAAACGT+GGG | + | chr3_3:72451464-72451483 | Msa0470370:intron | 35.0% | |
| AGCAGTATTTCACAAACCAT+GGG | - | chr3_3:72451590-72451609 | None:intergenic | 35.0% | |
| AAGCAGTATTTCACAAACCA+TGG | - | chr3_3:72451591-72451610 | None:intergenic | 35.0% | |
| GGTTTGTGAAATACTGCTTA+TGG | + | chr3_3:72451592-72451611 | Msa0470370:CDS | 35.0% | |
| AAAAAGGAATTAGCACCTTC+AGG | - | chr3_3:72451654-72451673 | None:intergenic | 35.0% | |
| AGGTGATGAACAACAGAAAA+AGG | - | chr3_3:72451670-72451689 | None:intergenic | 35.0% | |
| !! | ATATAATGTTGGGGAGTATC+AGG | - | chr3_3:72452216-72452235 | None:intergenic | 35.0% |
| TTTGGGTCTACAAAGATTTG+GGG | + | chr3_3:72452474-72452493 | Msa0470370:CDS | 35.0% | |
| TCCGATATTAAATACTCCCT+CGG | + | chr3_3:72452715-72452734 | Msa0470370:intron | 35.0% | |
| !! | ACCGAGGGAGTATTTAATAT+CGG | - | chr3_3:72452719-72452738 | None:intergenic | 35.0% |
| CTCATATAAAAAGAGACCGA+GGG | - | chr3_3:72452734-72452753 | None:intergenic | 35.0% | |
| ACTCATATAAAAAGAGACCG+AGG | - | chr3_3:72452735-72452754 | None:intergenic | 35.0% | |
| ATTACTCCCATAAAAAGGGA+CGG | + | chr3_3:72452983-72453002 | Msa0470370:intron | 35.0% | |
| !!! | CTTTTTTTTTTGTGGTGGTC+GGG | + | chr3_3:72453032-72453051 | Msa0470370:intron | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGTCG+GGG | + | chr3_3:72453033-72453052 | Msa0470370:intron | 35.0% |
| CATAATATATGCAAGATCCG+TGG | - | chr3_3:72453065-72453084 | None:intergenic | 35.0% | |
| ! | TGAGTTTAACTCAGTTGGTA+TGG | - | chr3_3:72453094-72453113 | None:intergenic | 35.0% |
| GAATCATGATATTGTGTGTG+TGG | - | chr3_3:72453290-72453309 | None:intergenic | 35.0% | |
| CGTCTCTCTCTCATATTTAA+TGG | + | chr3_3:72453328-72453347 | Msa0470370:intron | 35.0% | |
| TACCAGTTAAGTTAAGCTCA+CGG | - | chr3_3:72453607-72453626 | None:intergenic | 35.0% | |
| ! | TTTGGTGTGTTAACCCTAAA+GGG | + | chr3_3:72453741-72453760 | Msa0470370:intron | 35.0% |
| TTCAAATCAAACACTAGCGA+GGG | - | chr3_3:72453915-72453934 | None:intergenic | 35.0% | |
| !!! | TCTACTTTTTGGGATGATAC+AGG | + | chr3_3:72454115-72454134 | Msa0470370:intron | 35.0% |
| AGATACTTTCTCATTGAGAG+TGG | + | chr3_3:72454676-72454695 | Msa0470370:CDS | 35.0% | |
| TGCAAAGCTGATGATATTTC+TGG | + | chr3_3:72454760-72454779 | Msa0470370:CDS | 35.0% | |
| AAGGAAAGAAGCAGAGTTAA+GGG | - | chr3_3:72454815-72454834 | None:intergenic | 35.0% | |
| ACTAAATTAGAACCTGGAGA+AGG | - | chr3_3:72454834-72454853 | None:intergenic | 35.0% | |
| ! | TGATGTCGATTAGAATGTGT+TGG | + | chr3_3:72454937-72454956 | Msa0470370:intron | 35.0% |
| ! | GATGTCGATTAGAATGTGTT+GGG | + | chr3_3:72454938-72454957 | Msa0470370:intron | 35.0% |
| AATATGTACACATACGCAGA+AGG | - | chr3_3:72455325-72455344 | None:intergenic | 35.0% | |
| TTCTGCGTATGTGTACATAT+TGG | + | chr3_3:72455324-72455343 | Msa0470370:intron | 35.0% | |
| AGTGACCACTTTATAGTACA+AGG | - | chr3_3:72455501-72455520 | None:intergenic | 35.0% | |
| TGCAGATCATTATCATCTCA+TGG | + | chr3_3:72455573-72455592 | Msa0470370:intron | 35.0% | |
| CATTATCATCTCATGGATAC+TGG | + | chr3_3:72455580-72455599 | Msa0470370:CDS | 35.0% | |
| !! | TACCTCATTACTGCTTTTGT+GGG | + | chr3_3:72455632-72455651 | Msa0470370:CDS | 35.0% |
| !! | CTTGCTTTGAGGAATCATCA+TGG | - | chr3_3:72450326-72450345 | None:intergenic | 40.0% |
| TGATTCCTCAAAGCAAGATC+AGG | + | chr3_3:72450329-72450348 | Msa0470370:CDS | 40.0% | |
| TAGTACCTGATCTTGCTTTG+AGG | - | chr3_3:72450337-72450356 | None:intergenic | 40.0% | |
| GATGAAAACAGAAACCAGGA+TGG | + | chr3_3:72450500-72450519 | Msa0470370:intron | 40.0% | |
| TCTGATGTATTCAGTTGCTG+TGG | + | chr3_3:72451060-72451079 | Msa0470370:intron | 40.0% | |
| ! | CAATCATTGGCTGCAAATCT+TGG | + | chr3_3:72451119-72451138 | Msa0470370:CDS | 40.0% |
| ! | CACTGGTAAGACCTCAATTT+TGG | + | chr3_3:72451148-72451167 | Msa0470370:intron | 40.0% |
| TGATATCGCCCAACTTTGTA+AGG | - | chr3_3:72451323-72451342 | None:intergenic | 40.0% | |
| AAGCTCAAATAGGAAACGTG+GGG | + | chr3_3:72451465-72451484 | Msa0470370:intron | 40.0% | |
| TTTGTAAAGCTGAGTACCCA+TGG | + | chr3_3:72451571-72451590 | Msa0470370:CDS | 40.0% | |
| TAATATGGATGCGTGCATGT+GGG | - | chr3_3:72452180-72452199 | None:intergenic | 40.0% | |
| TTAATATGGATGCGTGCATG+TGG | - | chr3_3:72452181-72452200 | None:intergenic | 40.0% | |
| AAATTGATCGTGGCAGTGAT+TGG | + | chr3_3:72452370-72452389 | Msa0470370:intron | 40.0% | |
| AATTGATCGTGGCAGTGATT+GGG | + | chr3_3:72452371-72452390 | Msa0470370:intron | 40.0% | |
| TACTATTCCACATCCCTGTA+TGG | + | chr3_3:72452413-72452432 | Msa0470370:CDS | 40.0% | |
| ACTATTCCACATCCCTGTAT+GGG | + | chr3_3:72452414-72452433 | Msa0470370:CDS | 40.0% | |
| !!! | TGCAGCACTCTCTTGTTTTT+GGG | + | chr3_3:72452457-72452476 | Msa0470370:CDS | 40.0% |
| !! | CATTCAAGGGCATTAAAGAC+AGG | - | chr3_3:72452636-72452655 | None:intergenic | 40.0% |
| CTCTTCAAGGATGCATTCAA+GGG | - | chr3_3:72452649-72452668 | None:intergenic | 40.0% | |
| TCTCTTCAAGGATGCATTCA+AGG | - | chr3_3:72452650-72452669 | None:intergenic | 40.0% | |
| TTGAATGCATCCTTGAAGAG+AGG | + | chr3_3:72452649-72452668 | Msa0470370:intron | 40.0% | |
| TCCTTGAAGAGAGGTCATAT+AGG | + | chr3_3:72452658-72452677 | Msa0470370:intron | 40.0% | |
| ACCTATATGACCTCTCTTCA+AGG | - | chr3_3:72452662-72452681 | None:intergenic | 40.0% | |
| AAGAGAGGTCATATAGGTCA+TGG | + | chr3_3:72452664-72452683 | Msa0470370:intron | 40.0% | |
| TTACTCCCATAAAAAGGGAC+GGG | + | chr3_3:72452984-72453003 | Msa0470370:intron | 40.0% | |
| CCACATGAGTTTAACTCAGT+TGG | - | chr3_3:72453099-72453118 | None:intergenic | 40.0% | |
| CCAACTGAGTTAAACTCATG+TGG | + | chr3_3:72453096-72453115 | Msa0470370:intron | 40.0% | |
| TTCCGTGAGCTTAACTTAAC+TGG | + | chr3_3:72453602-72453621 | Msa0470370:intron | 40.0% | |
| GGTTAACACACCAAAGAGAA+AGG | - | chr3_3:72453736-72453755 | None:intergenic | 40.0% | |
| ! | CTTTGGTGTGTTAACCCTAA+AGG | + | chr3_3:72453740-72453759 | Msa0470370:intron | 40.0% |
| GTTCAAATCAAACACTAGCG+AGG | - | chr3_3:72453916-72453935 | None:intergenic | 40.0% | |
| !!! | AGCTCGGCTTTTTTGAACTA+AGG | - | chr3_3:72453962-72453981 | None:intergenic | 40.0% |
| !!! | TTTTTGGGATGATACAGGTG+AGG | + | chr3_3:72454120-72454139 | Msa0470370:intron | 40.0% |
| GTAATGGCTGCATGTTTCTT+TGG | + | chr3_3:72454176-72454195 | Msa0470370:CDS | 40.0% | |
| TATGTAAAACCCCCTGCTAA+AGG | + | chr3_3:72454209-72454228 | Msa0470370:CDS | 40.0% | |
| TCAATTACTCCTTTAGCAGG+GGG | - | chr3_3:72454221-72454240 | None:intergenic | 40.0% | |
| CTCAATTACTCCTTTAGCAG+GGG | - | chr3_3:72454222-72454241 | None:intergenic | 40.0% | |
| CCTCAATTACTCCTTTAGCA+GGG | - | chr3_3:72454223-72454242 | None:intergenic | 40.0% | |
| CCTGCTAAAGGAGTAATTGA+GGG | + | chr3_3:72454221-72454240 | Msa0470370:CDS | 40.0% | |
| ATGTTTGTTCCCAAACTCAG+CGG | + | chr3_3:72454245-72454264 | Msa0470370:CDS | 40.0% | |
| ! | AGTTCACGCAGAAAAGTGTA+TGG | - | chr3_3:72454367-72454386 | None:intergenic | 40.0% |
| GTGCTATCTCGAAAAATACC+TGG | + | chr3_3:72454505-72454524 | Msa0470370:CDS | 40.0% | |
| AAAATACCTGGTACTAAGCG+TGG | + | chr3_3:72454517-72454536 | Msa0470370:CDS | 40.0% | |
| GTTGCAATGATTTCTGTGAC+TGG | + | chr3_3:72454730-72454749 | Msa0470370:CDS | 40.0% | |
| GAAGGAAAGAAGCAGAGTTA+AGG | - | chr3_3:72454816-72454835 | None:intergenic | 40.0% | |
| GTTGTTGCTATAGGGTTTCT+TGG | + | chr3_3:72455144-72455163 | Msa0470370:intron | 40.0% | |
| !! | TACAACTAGACTTGGTGCTA+TGG | - | chr3_3:72455218-72455237 | None:intergenic | 40.0% |
| AGGAGTGGAATTAAAGCGAA+TGG | - | chr3_3:72455410-72455429 | None:intergenic | 40.0% | |
| ATCTCATGGATACTGGGTTT+GGG | + | chr3_3:72455587-72455606 | Msa0470370:CDS | 40.0% | |
| ATACTGGGTTTGGGAATCAT+TGG | + | chr3_3:72455596-72455615 | Msa0470370:CDS | 40.0% | |
| !! | CTACCTCATTACTGCTTTTG+TGG | + | chr3_3:72455631-72455650 | Msa0470370:CDS | 40.0% |
| AACCCACAAAAGCAGTAATG+AGG | - | chr3_3:72455637-72455656 | None:intergenic | 40.0% | |
| !! | TCATTACTGCTTTTGTGGGT+TGG | + | chr3_3:72455636-72455655 | Msa0470370:CDS | 40.0% |
| TCATAACAGTCTACCAAAGG+TGG | + | chr3_3:72455664-72455683 | Msa0470370:CDS | 40.0% | |
| ATGAACACATTTGCCACCTT+TGG | - | chr3_3:72455680-72455699 | None:intergenic | 40.0% | |
| AAGGTGGCAAATGTGTTCAT+CGG | + | chr3_3:72455680-72455699 | Msa0470370:CDS | 40.0% | |
| GCTCATTGTGTTTCCTCTAA+TGG | + | chr3_3:72455703-72455722 | Msa0470370:CDS | 40.0% | |
| ! | ACGATATACAGTGCCATTAG+AGG | - | chr3_3:72455719-72455738 | None:intergenic | 40.0% |
| AGACACTGTTGTAACGTTTG+TGG | + | chr3_3:72455766-72455785 | Msa0470370:CDS | 40.0% | |
| TGTAACGTTTGTGGAGGTTA+AGG | + | chr3_3:72455775-72455794 | Msa0470370:CDS | 40.0% | |
| ! | TATAAGGAGGTGTGCCAGAA+GGG | - | chr3_3:72450302-72450321 | None:intergenic | 45.0% |
| ! | TTATAAGGAGGTGTGCCAGA+AGG | - | chr3_3:72450303-72450322 | None:intergenic | 45.0% |
| ACCAGGATGGAAGAAGTTCT+TGG | + | chr3_3:72450513-72450532 | Msa0470370:CDS | 45.0% | |
| TTCTTGGCATATGTAGGTCC+TGG | + | chr3_3:72450529-72450548 | Msa0470370:CDS | 45.0% | |
| !! | TCCTGGTTTTCTTGTCTCCT+TGG | + | chr3_3:72450546-72450565 | Msa0470370:CDS | 45.0% |
| ACTATTTCCGGGATCAAGGT+AGG | - | chr3_3:72450572-72450591 | None:intergenic | 45.0% | |
| !! | GTGGAAACTGATTTGCAAGC+TGG | + | chr3_3:72450909-72450928 | Msa0470370:intron | 45.0% |
| ATAGCTGCAGACATACCTGA+AGG | + | chr3_3:72451636-72451655 | Msa0470370:CDS | 45.0% | |
| !! | GAATGGTTAGCCTCACATCA+AGG | + | chr3_3:72452115-72452134 | Msa0470370:intron | 45.0% |
| CTATTCCACATCCCTGTATG+GGG | + | chr3_3:72452415-72452434 | Msa0470370:CDS | 45.0% | |
| !!! | GTGCAGCACTCTCTTGTTTT+TGG | + | chr3_3:72452456-72452475 | Msa0470370:CDS | 45.0% |
| ! | ACACTCCCGTCCCTTTTTAT+GGG | - | chr3_3:72452992-72453011 | None:intergenic | 45.0% |
| ! | ATAAAAAGGGACGGGAGTGT+CGG | + | chr3_3:72452992-72453011 | Msa0470370:intron | 45.0% |
| CCTATGTGACCTCTCTTCAA+GGG | - | chr3_3:72453487-72453506 | None:intergenic | 45.0% | |
| ACCTATGTGACCTCTCTTCA+AGG | - | chr3_3:72453488-72453507 | None:intergenic | 45.0% | |
| AAGAGAGGTCACATAGGTCA+TGG | + | chr3_3:72453490-72453509 | Msa0470370:intron | 45.0% | |
| TGATGAGAGGGTAGATAGCT+CGG | - | chr3_3:72453978-72453997 | None:intergenic | 45.0% | |
| GATGATACAGGTGAGGAAGT+TGG | + | chr3_3:72454127-72454146 | Msa0470370:intron | 45.0% | |
| CCCTGCTAAAGGAGTAATTG+AGG | + | chr3_3:72454220-72454239 | Msa0470370:CDS | 45.0% | |
| CCCTCAATTACTCCTTTAGC+AGG | - | chr3_3:72454224-72454243 | None:intergenic | 45.0% | |
| !! | CATGATAAGGGCACCCAAAA+GGG | - | chr3_3:72454297-72454316 | None:intergenic | 45.0% |
| ATAGCACTAGAGCAGAATGG+AGG | - | chr3_3:72454492-72454511 | None:intergenic | 45.0% | |
| GAGATAGCACTAGAGCAGAA+TGG | - | chr3_3:72454495-72454514 | None:intergenic | 45.0% | |
| ! | CATGATAAACTGGCCTGCAT+AGG | - | chr3_3:72455032-72455051 | None:intergenic | 45.0% |
| ! | GGATAAGGAACTTGGTGACT+AGG | + | chr3_3:72455185-72455204 | Msa0470370:CDS | 45.0% |
| GTACACATACGCAGAAGGAA+GGG | - | chr3_3:72455320-72455339 | None:intergenic | 45.0% | |
| TGTACACATACGCAGAAGGA+AGG | - | chr3_3:72455321-72455340 | None:intergenic | 45.0% | |
| CTGCTGCTAAACTTAAGGAG+TGG | - | chr3_3:72455425-72455444 | None:intergenic | 45.0% | |
| TCCTTAAGTTTAGCAGCAGC+AGG | + | chr3_3:72455426-72455445 | Msa0470370:CDS | 45.0% | |
| TCCTGCTGCTGCTAAACTTA+AGG | - | chr3_3:72455430-72455449 | None:intergenic | 45.0% | |
| ATTCTTGTGAGGTCCCATCT+TGG | - | chr3_3:72455453-72455472 | None:intergenic | 45.0% | |
| CATCTCATGGATACTGGGTT+TGG | + | chr3_3:72455586-72455605 | Msa0470370:CDS | 45.0% | |
| AGGTGGCAAATGTGTTCATC+GGG | + | chr3_3:72455681-72455700 | Msa0470370:CDS | 45.0% | |
| CACTGTTGTAACGTTTGTGG+AGG | + | chr3_3:72455769-72455788 | Msa0470370:CDS | 45.0% | |
| AATGCAAACCCACGTGGAAA+AGG | + | chr3_3:72455808-72455827 | Msa0470370:CDS | 45.0% | |
| ATGCAAACCCACGTGGAAAA+GGG | + | chr3_3:72455809-72455828 | Msa0470370:CDS | 45.0% | |
| GAAAAGGGGTTCGTAAACGA+TGG | + | chr3_3:72455824-72455843 | Msa0470370:CDS | 45.0% | |
| !!! | AATATCAATATAATTATTTT+TGG | - | chr3_3:72450980-72450999 | None:intergenic | 5.0% |
| !!! | TTTAATTTAAATATACTAAA+AGG | + | chr3_3:72451907-72451926 | Msa0470370:intron | 5.0% |
| GCCAGAAGGGGTCACATTAA+CGG | - | chr3_3:72450289-72450308 | None:intergenic | 50.0% | |
| ! | ATAAGGAGGTGTGCCAGAAG+GGG | - | chr3_3:72450301-72450320 | None:intergenic | 50.0% |
| GCCAAGAACTTCTTCCATCC+TGG | - | chr3_3:72450517-72450536 | None:intergenic | 50.0% | |
| GCCAAGGAGACAAGAAAACC+AGG | - | chr3_3:72450550-72450569 | None:intergenic | 50.0% | |
| TTGCAAGCTGGAGCTAACCA+CGG | + | chr3_3:72450921-72450940 | Msa0470370:CDS | 50.0% | |
| TGGAGCTAACCACGGATATG+AGG | + | chr3_3:72450929-72450948 | Msa0470370:CDS | 50.0% | |
| GCAAATCTTGGAGTGTGCAC+TGG | + | chr3_3:72451131-72451150 | Msa0470370:CDS | 50.0% | |
| ! | GACACTCCCGTCCCTTTTTA+TGG | - | chr3_3:72452993-72453012 | None:intergenic | 50.0% |
| !! | TAAAAAGGGACGGGAGTGTC+GGG | + | chr3_3:72452993-72453012 | Msa0470370:intron | 50.0% |
| !! | TCTTCAAGGGAGCATCCAAG+TGG | - | chr3_3:72453474-72453493 | None:intergenic | 50.0% |
| TTGGATGCTCCCTTGAAGAG+AGG | + | chr3_3:72453475-72453494 | Msa0470370:intron | 50.0% | |
| CCCTTGAAGAGAGGTCACAT+AGG | + | chr3_3:72453484-72453503 | Msa0470370:intron | 50.0% | |
| CCAGATCGCGTTTCCCTTTA+GGG | - | chr3_3:72453757-72453776 | None:intergenic | 50.0% | |
| ACCAGATCGCGTTTCCCTTT+AGG | - | chr3_3:72453758-72453777 | None:intergenic | 50.0% | |
| GCGATCTGGTAATCCGAGTT+CGG | + | chr3_3:72453768-72453787 | Msa0470370:intron | 50.0% | |
| GTTCCCAAACTCAGCGGAAA+TGG | + | chr3_3:72454251-72454270 | Msa0470370:CDS | 50.0% | |
| GCACCATTTCCGCTGAGTTT+GGG | - | chr3_3:72454257-72454276 | None:intergenic | 50.0% | |
| AGCACCATTTCCGCTGAGTT+TGG | - | chr3_3:72454258-72454277 | None:intergenic | 50.0% | |
| ! | AGGCGATGCTATTGCCCTTT+TGG | + | chr3_3:72454280-72454299 | Msa0470370:CDS | 50.0% |
| ! | GGCGATGCTATTGCCCTTTT+GGG | + | chr3_3:72454281-72454300 | Msa0470370:CDS | 50.0% |
| !! | GCATGATAAGGGCACCCAAA+AGG | - | chr3_3:72454298-72454317 | None:intergenic | 50.0% |
| TTGATGCCACGCTTAGTACC+AGG | - | chr3_3:72454526-72454545 | None:intergenic | 50.0% | |
| CTCTGCTTCTTTCCTTCTCC+AGG | + | chr3_3:72454819-72454838 | Msa0470370:CDS | 50.0% | |
| TCCTGAGGCTAGCAATGCTA+TGG | - | chr3_3:72454987-72455006 | None:intergenic | 50.0% | |
| GATGGCAGAACTTTGTCCTG+AGG | - | chr3_3:72455002-72455021 | None:intergenic | 50.0% | |
| GGACAAAGTTCTGCCATCAC+TGG | + | chr3_3:72455004-72455023 | Msa0470370:CDS | 50.0% | |
| TGCAGGCCAGTTTATCATGC+AGG | + | chr3_3:72455033-72455052 | Msa0470370:CDS | 50.0% | |
| !! | ATTGGTGGTTCTTCTGGAGC+TGG | + | chr3_3:72455244-72455263 | Msa0470370:CDS | 50.0% |
| TACGCAGAAGGAAGGGAGAA+CGG | - | chr3_3:72455313-72455332 | None:intergenic | 50.0% | |
| TGCAAACCCACGTGGAAAAG+GGG | + | chr3_3:72455810-72455829 | Msa0470370:CDS | 50.0% | |
| ! | TACGAACCCCTTTTCCACGT+GGG | - | chr3_3:72455819-72455838 | None:intergenic | 50.0% |
| ! | TTACGAACCCCTTTTCCACG+TGG | - | chr3_3:72455820-72455839 | None:intergenic | 50.0% |
| AGCTGATATCACTCGACCAG+AGG | + | chr3_3:72455886-72455905 | Msa0470370:CDS | 50.0% | |
| GCTGATATCACTCGACCAGA+GGG | + | chr3_3:72455887-72455906 | Msa0470370:CDS | 50.0% | |
| GCCGTTAATGTGACCCCTTC+TGG | + | chr3_3:72450285-72450304 | Msa0470370:CDS | 55.0% | |
| TCCTTGGCCTACCTTGATCC+CGG | + | chr3_3:72450562-72450581 | Msa0470370:CDS | 55.0% | |
| GCGCGTGCATGTGTGTTTGA+TGG | - | chr3_3:72451993-72452012 | None:intergenic | 55.0% | |
| GATCGTGGCAGTGATTGGGA+CGG | + | chr3_3:72452375-72452394 | Msa0470370:intron | 55.0% | |
| TTCCACATCCCTGTATGGGG+AGG | + | chr3_3:72452418-72452437 | Msa0470370:CDS | 55.0% | |
| TCCACATCCCTGTATGGGGA+GGG | + | chr3_3:72452419-72452438 | Msa0470370:CDS | 55.0% | |
| ACAGAACCCCTCCCCATACA+GGG | - | chr3_3:72452429-72452448 | None:intergenic | 55.0% | |
| AACAGAACCCCTCCCCATAC+AGG | - | chr3_3:72452430-72452449 | None:intergenic | 55.0% | |
| CCCTAAAGGGAAACGCGATC+TGG | + | chr3_3:72453754-72453773 | Msa0470370:intron | 55.0% | |
| !! | CTCAGCGGAAATGGTGCTGT+AGG | + | chr3_3:72454260-72454279 | Msa0470370:CDS | 55.0% |
| ! | GCCATAGCATTGCTAGCCTC+AGG | + | chr3_3:72454983-72455002 | Msa0470370:CDS | 55.0% |
| GCCATCACTGGAACCTATGC+AGG | + | chr3_3:72455016-72455035 | Msa0470370:CDS | 55.0% | |
| GCCTGCATAGGTTCCAGTGA+TGG | - | chr3_3:72455020-72455039 | None:intergenic | 55.0% | |
| TAGCAGCAGCAGGACCAAGA+TGG | + | chr3_3:72455436-72455455 | Msa0470370:CDS | 55.0% | |
| AGCAGCAGCAGGACCAAGAT+GGG | + | chr3_3:72455437-72455456 | Msa0470370:CDS | 55.0% | |
| CCACGTGGGTTTGCATTGCT+GGG | - | chr3_3:72455805-72455824 | None:intergenic | 55.0% | |
| TCCACGTGGGTTTGCATTGC+TGG | - | chr3_3:72455806-72455825 | None:intergenic | 55.0% | |
| TCCGGGATCAAGGTAGGCCA+AGG | - | chr3_3:72450566-72450585 | None:intergenic | 60.0% | |
| CCACATCCCTGTATGGGGAG+GGG | + | chr3_3:72452420-72452439 | Msa0470370:CDS | 60.0% | |
| TGGGGAGGGGTTCTGTTGAC+TGG | + | chr3_3:72452433-72452452 | Msa0470370:CDS | 60.0% | |
| ! | GGGGAGGGGTTCTGTTGACT+GGG | + | chr3_3:72452434-72452453 | Msa0470370:CDS | 60.0% |
| GGTGGTCGGGGTTTGAACCA+CGG | + | chr3_3:72453045-72453064 | Msa0470370:intron | 60.0% | |
| CCCAGCAATGCAAACCCACG+TGG | + | chr3_3:72455802-72455821 | Msa0470370:CDS | 60.0% | |
| TCACTCGACCAGAGGGACCT+AGG | + | chr3_3:72455894-72455913 | Msa0470370:CDS | 60.0% | |
| CCCCTCCCCATACAGGGATG+TGG | - | chr3_3:72452423-72452442 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 72450240 | 72455922 | 72450240 | ID=Msa0470370;Name=Msa0470370 |
| chr3_3 | mRNA | 72450240 | 72455922 | 72450240 | ID=Msa0470370-mRNA-1;Parent=Msa0470370;Name=Msa0470370-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|13|0|542 |
| chr3_3 | exon | 72450240 | 72450350 | 72450240 | ID=Msa0470370-mRNA-1:exon:18045;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72450511 | 72450589 | 72450511 | ID=Msa0470370-mRNA-1:exon:18046;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72450910 | 72450950 | 72450910 | ID=Msa0470370-mRNA-1:exon:18047;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72451074 | 72451152 | 72451074 | ID=Msa0470370-mRNA-1:exon:18048;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72451553 | 72451657 | 72451553 | ID=Msa0470370-mRNA-1:exon:18049;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72452386 | 72452495 | 72452386 | ID=Msa0470370-mRNA-1:exon:18050;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72454137 | 72454318 | 72454137 | ID=Msa0470370-mRNA-1:exon:18051;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72454477 | 72454546 | 72454477 | ID=Msa0470370-mRNA-1:exon:18052;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72454667 | 72454840 | 72454667 | ID=Msa0470370-mRNA-1:exon:18053;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72454950 | 72455054 | 72454950 | ID=Msa0470370-mRNA-1:exon:18054;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72455157 | 72455288 | 72455157 | ID=Msa0470370-mRNA-1:exon:18055;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72455386 | 72455481 | 72455386 | ID=Msa0470370-mRNA-1:exon:18056;Parent=Msa0470370-mRNA-1 |
| chr3_3 | exon | 72455578 | 72455922 | 72455578 | ID=Msa0470370-mRNA-1:exon:18057;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72450240 | 72450350 | 72450240 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72450511 | 72450589 | 72450511 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72450910 | 72450950 | 72450910 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72451074 | 72451152 | 72451074 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72451553 | 72451657 | 72451553 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72452386 | 72452495 | 72452386 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72454137 | 72454318 | 72454137 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72454477 | 72454546 | 72454477 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72454667 | 72454840 | 72454667 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72454950 | 72455054 | 72454950 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72455157 | 72455288 | 72455157 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72455386 | 72455481 | 72455386 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| chr3_3 | CDS | 72455578 | 72455922 | 72455578 | ID=Msa0470370-mRNA-1:cds;Parent=Msa0470370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
