Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319290 | XP_003627593.1 | 97.611 | 293 | 7 | 0 | 1 | 293 | 1 | 293 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319290 | sp|Q9M2E2|SDR1_ARATH | 54.730 | 296 | 131 | 3 | 1 | 293 | 1 | 296 | 1.21e-113 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319290 | G7LBT1 | 97.611 | 293 | 7 | 0 | 1 | 293 | 1 | 293 | 0.0 | 587 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014590 | Msa1319290 | 0.817548 | 3.114765e-52 | -8.615850e-47 |
| Msa0024280 | Msa1319290 | 0.803477 | 3.420934e-49 | -8.615850e-47 |
| Msa0048950 | Msa1319290 | 0.821169 | 4.656465e-53 | -8.615850e-47 |
| Msa0059880 | Msa1319290 | 0.827604 | 1.427016e-54 | -8.615850e-47 |
| Msa0069480 | Msa1319290 | 0.805908 | 1.063677e-49 | -8.615850e-47 |
| Msa0072030 | Msa1319290 | 0.813786 | 2.145535e-51 | -8.615850e-47 |
| Msa0074620 | Msa1319290 | 0.834559 | 2.794842e-56 | -8.615850e-47 |
| Msa0084150 | Msa1319290 | 0.809378 | 1.949413e-50 | -8.615850e-47 |
| Msa0120050 | Msa1319290 | 0.805754 | 1.145711e-49 | -8.615850e-47 |
| Msa0604280 | Msa1319290 | 0.813846 | 2.081762e-51 | -8.615850e-47 |
| Msa0605470 | Msa1319290 | 0.818446 | 1.951668e-52 | -8.615850e-47 |
| Msa0616010 | Msa1319290 | 0.807507 | 4.888259e-50 | -8.615850e-47 |
| Msa0631700 | Msa1319290 | 0.817516 | 3.166906e-52 | -8.615850e-47 |
| Msa0640290 | Msa1319290 | 0.824404 | 8.220393e-54 | -8.615850e-47 |
| Msa0643840 | Msa1319290 | 0.843300 | 1.525040e-58 | -8.615850e-47 |
| Msa0645150 | Msa1319290 | 0.801357 | 9.355594e-49 | -8.615850e-47 |
| Msa0655430 | Msa1319290 | 0.841481 | 4.630560e-58 | -8.615850e-47 |
| Msa0665830 | Msa1319290 | 0.808725 | 2.689512e-50 | -8.615850e-47 |
| Msa0670360 | Msa1319290 | 0.832257 | 1.047828e-55 | -8.615850e-47 |
| Msa0678620 | Msa1319290 | 0.822394 | 2.424582e-53 | -8.615850e-47 |
| Msa0684720 | Msa1319290 | 0.806349 | 8.589866e-50 | -8.615850e-47 |
| Msa0685080 | Msa1319290 | 0.822859 | 1.890351e-53 | -8.615850e-47 |
| Msa0699230 | Msa1319290 | 0.814768 | 1.302045e-51 | -8.615850e-47 |
| Msa0727480 | Msa1319290 | 0.845458 | 4.010647e-59 | -8.615850e-47 |
| Msa0735280 | Msa1319290 | 0.807199 | 5.679353e-50 | -8.615850e-47 |
| Msa0768670 | Msa1319290 | 0.846787 | 1.744322e-59 | -8.615850e-47 |
| Msa0768720 | Msa1319290 | 0.828993 | 6.600047e-55 | -8.615850e-47 |
| Msa0777250 | Msa1319290 | 0.818946 | 1.503227e-52 | -8.615850e-47 |
| Msa0814160 | Msa1319290 | 0.815160 | 1.065845e-51 | -8.615850e-47 |
| Msa0814230 | Msa1319290 | 0.832891 | 7.295501e-56 | -8.615850e-47 |
| Msa0824860 | Msa1319290 | 0.811810 | 5.809824e-51 | -8.615850e-47 |
| Msa0147670 | Msa1319290 | 0.800319 | 1.523759e-48 | -8.615850e-47 |
| Msa0150910 | Msa1319290 | 0.817869 | 2.635937e-52 | -8.615850e-47 |
| Msa0163340 | Msa1319290 | 0.831896 | 1.287091e-55 | -8.615850e-47 |
| Msa0170990 | Msa1319290 | 0.829289 | 5.595986e-55 | -8.615850e-47 |
| Msa0190670 | Msa1319290 | 0.805901 | 1.067337e-49 | -8.615850e-47 |
| Msa0219210 | Msa1319290 | 0.818889 | 1.548998e-52 | -8.615850e-47 |
| Msa1238440 | Msa1319290 | 0.822285 | 2.570616e-53 | -8.615850e-47 |
| Msa1269050 | Msa1319290 | 0.821425 | 4.065452e-53 | -8.615850e-47 |
| Msa1270010 | Msa1319290 | 0.887861 | 9.835315e-73 | -8.615850e-47 |
| Msa1286420 | Msa1319290 | 0.810875 | 9.271314e-51 | -8.615850e-47 |
| Msa1296870 | Msa1319290 | 0.801335 | 9.452823e-49 | -8.615850e-47 |
| Msa1300610 | Msa1319290 | 0.818301 | 2.105275e-52 | -8.615850e-47 |
| Msa1319290 | Msa1323120 | 0.823712 | 1.195040e-53 | -8.615850e-47 |
| Msa1319290 | Msa1329740 | 0.804127 | 2.507878e-49 | -8.615850e-47 |
| Msa1319290 | Msa1357490 | 0.819217 | 1.304164e-52 | -8.615850e-47 |
| Msa1319290 | Msa1376070 | 0.859487 | 3.997236e-63 | -8.615850e-47 |
| Msa1319290 | Msa1377520 | 0.833439 | 5.330361e-56 | -8.615850e-47 |
| Msa1319290 | Msa1411550 | 0.825409 | 4.761665e-54 | -8.615850e-47 |
| Msa1319290 | Msa1420020 | 0.819960 | 8.824548e-53 | -8.615850e-47 |
| Msa1319290 | Msa1421130 | 0.811923 | 5.491445e-51 | -8.615850e-47 |
| Msa1319290 | Msa1445900 | 0.825551 | 4.408150e-54 | -8.615850e-47 |
| Msa1319290 | Msa1449770 | 0.804991 | 1.656000e-49 | -8.615850e-47 |
| Msa1319290 | Msa1456600 | 0.812859 | 3.429446e-51 | -8.615850e-47 |
| Msa1319290 | Msa1459610 | 0.857318 | 1.771441e-62 | -8.615850e-47 |
| Msa0366510 | Msa1319290 | 0.816233 | 6.147057e-52 | -8.615850e-47 |
| Msa0374040 | Msa1319290 | 0.808707 | 2.713333e-50 | -8.615850e-47 |
| Msa0374130 | Msa1319290 | 0.802005 | 6.887252e-49 | -8.615850e-47 |
| Msa0374650 | Msa1319290 | 0.805542 | 1.269643e-49 | -8.615850e-47 |
| Msa0396860 | Msa1319290 | 0.804549 | 2.048143e-49 | -8.615850e-47 |
| Msa0414480 | Msa1319290 | 0.820219 | 7.698119e-53 | -8.615850e-47 |
| Msa0423680 | Msa1319290 | 0.802381 | 5.764493e-49 | -8.615850e-47 |
| Msa0469450 | Msa1319290 | 0.803153 | 3.994246e-49 | -8.615850e-47 |
| Msa0469550 | Msa1319290 | 0.819003 | 1.458869e-52 | -8.615850e-47 |
| Msa0470370 | Msa1319290 | 0.801443 | 8.984055e-49 | -8.615850e-47 |
| Msa0985700 | Msa1319290 | 0.838541 | 2.705286e-57 | -8.615850e-47 |
| Msa0987640 | Msa1319290 | 0.810206 | 1.293271e-50 | -8.615850e-47 |
| Msa0993450 | Msa1319290 | 0.817703 | 2.874007e-52 | -8.615850e-47 |
| Msa1003110 | Msa1319290 | 0.816922 | 4.307726e-52 | -8.615850e-47 |
| Msa1006170 | Msa1319290 | 0.806469 | 8.102291e-50 | -8.615850e-47 |
| Msa1021620 | Msa1319290 | 0.829184 | 5.933097e-55 | -8.615850e-47 |
| Msa1022510 | Msa1319290 | 0.807015 | 6.211978e-50 | -8.615850e-47 |
| Msa1024350 | Msa1319290 | 0.820777 | 5.732521e-53 | -8.615850e-47 |
| Msa1026050 | Msa1319290 | 0.814762 | 1.306213e-51 | -8.615850e-47 |
| Msa1037350 | Msa1319290 | 0.830560 | 2.742299e-55 | -8.615850e-47 |
| Msa1061670 | Msa1319290 | 0.856434 | 3.224865e-62 | -8.615850e-47 |
| Msa1076830 | Msa1319290 | 0.860787 | 1.619424e-63 | -8.615850e-47 |
| Msa1081610 | Msa1319290 | 0.810990 | 8.757878e-51 | -8.615850e-47 |
| Msa1104960 | Msa1319290 | 0.820041 | 8.458901e-53 | -8.615850e-47 |
| Msa1106680 | Msa1319290 | 0.829624 | 4.638506e-55 | -8.615850e-47 |
| Msa1106960 | Msa1319290 | 0.846653 | 1.897229e-59 | -8.615850e-47 |
| Msa0269720 | Msa1319290 | 0.817349 | 3.452425e-52 | -8.615850e-47 |
| Msa0278940 | Msa1319290 | 0.804647 | 1.953533e-49 | -8.615850e-47 |
| Msa0298270 | Msa1319290 | 0.839199 | 1.827584e-57 | -8.615850e-47 |
| Msa0354540 | Msa1319290 | 0.803485 | 3.409465e-49 | -8.615850e-47 |
| Msa1109880 | Msa1319290 | 0.840257 | 9.696936e-58 | -8.615850e-47 |
| Msa1109890 | Msa1319290 | 0.825865 | 3.712157e-54 | -8.615850e-47 |
| Msa1123010 | Msa1319290 | 0.828572 | 8.343204e-55 | -8.615850e-47 |
| Msa1133860 | Msa1319290 | 0.813992 | 1.933015e-51 | -8.615850e-47 |
| Msa1147030 | Msa1319290 | 0.809096 | 2.239975e-50 | -8.615850e-47 |
| Msa1148210 | Msa1319290 | 0.801255 | 9.815383e-49 | -8.615850e-47 |
| Msa1149020 | Msa1319290 | 0.821913 | 3.135741e-53 | -8.615850e-47 |
| Msa1155630 | Msa1319290 | 0.807175 | 5.747925e-50 | -8.615850e-47 |
| Msa1164240 | Msa1319290 | 0.813785 | 2.146884e-51 | -8.615850e-47 |
| Msa1214960 | Msa1319290 | 0.800188 | 1.620325e-48 | -8.615850e-47 |
| Msa0491770 | Msa1319290 | 0.810469 | 1.134787e-50 | -8.615850e-47 |
| Msa0507600 | Msa1319290 | 0.809294 | 2.031333e-50 | -8.615850e-47 |
| Msa0515260 | Msa1319290 | 0.818983 | 1.474425e-52 | -8.615850e-47 |
| Msa0525450 | Msa1319290 | 0.808317 | 3.285964e-50 | -8.615850e-47 |
| Msa0531030 | Msa1319290 | 0.807153 | 5.809329e-50 | -8.615850e-47 |
| Msa0531080 | Msa1319290 | 0.801881 | 7.303904e-49 | -8.615850e-47 |
| Msa0535570 | Msa1319290 | 0.823811 | 1.132854e-53 | -8.615850e-47 |
| Msa0543740 | Msa1319290 | 0.826153 | 3.171799e-54 | -8.615850e-47 |
| Msa0554660 | Msa1319290 | 0.840904 | 6.563649e-58 | -8.615850e-47 |
| Msa0562050 | Msa1319290 | 0.824735 | 6.872059e-54 | -8.615850e-47 |
| Msa0579530 | Msa1319290 | 0.806839 | 6.769581e-50 | -8.615850e-47 |
| Msa0587920 | Msa1319290 | 0.810531 | 1.100501e-50 | -8.615850e-47 |
| Msa0591490 | Msa1319290 | 0.828192 | 1.030749e-54 | -8.615850e-47 |
| Msa0599600 | Msa1319290 | 0.814917 | 1.206983e-51 | -8.615850e-47 |
| Msa0854840 | Msa1319290 | 0.808293 | 3.325875e-50 | -8.615850e-47 |
| Msa0863840 | Msa1319290 | 0.806620 | 7.527932e-50 | -8.615850e-47 |
| Msa0869660 | Msa1319290 | 0.801098 | 1.056951e-48 | -8.615850e-47 |
| Msa0883640 | Msa1319290 | 0.836962 | 6.881545e-57 | -8.615850e-47 |
| Msa0893840 | Msa1319290 | 0.815294 | 9.954383e-52 | -8.615850e-47 |
| Msa0896920 | Msa1319290 | 0.815577 | 8.611048e-52 | -8.615850e-47 |
| Msa0902340 | Msa1319290 | 0.808344 | 3.242700e-50 | -8.615850e-47 |
| Msa0910830 | Msa1319290 | 0.849401 | 3.310886e-60 | -8.615850e-47 |
| Msa0913550 | Msa1319290 | 0.830597 | 2.685687e-55 | -8.615850e-47 |
| Msa0941120 | Msa1319290 | 0.810043 | 1.402082e-50 | -8.615850e-47 |
| Msa0951150 | Msa1319290 | 0.808245 | 3.405193e-50 | -8.615850e-47 |
| Msa0960090 | Msa1319290 | 0.837723 | 4.393328e-57 | -8.615850e-47 |
| Msa0972370 | Msa1319290 | 0.817035 | 4.063614e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319290 | MtrunA17_Chr8g0349721 | 97.611 | 293 | 7 | 0 | 1 | 293 | 1 | 293 | 0.0 | 587 |
| Msa1319290 | MtrunA17_Chr8g0349701 | 96.587 | 293 | 10 | 0 | 1 | 293 | 1 | 293 | 0.0 | 581 |
| Msa1319290 | MtrunA17_Chr7g0247041 | 66.782 | 289 | 94 | 2 | 7 | 293 | 6 | 294 | 1.04e-134 | 383 |
| Msa1319290 | MtrunA17_Chr8g0349801 | 55.705 | 298 | 127 | 2 | 1 | 293 | 1 | 298 | 2.18e-119 | 344 |
| Msa1319290 | MtrunA17_Chr8g0349811 | 55.034 | 298 | 129 | 2 | 1 | 293 | 1 | 298 | 6.10e-119 | 343 |
| Msa1319290 | MtrunA17_Chr8g0349851 | 54.515 | 299 | 130 | 2 | 1 | 293 | 1 | 299 | 1.82e-118 | 342 |
| Msa1319290 | MtrunA17_Chr8g0349781 | 55.034 | 298 | 129 | 2 | 1 | 293 | 1 | 298 | 2.61e-118 | 342 |
| Msa1319290 | MtrunA17_Chr7g0247011 | 56.314 | 293 | 121 | 3 | 1 | 293 | 1 | 286 | 3.24e-117 | 338 |
| Msa1319290 | MtrunA17_Chr8g0349641 | 55.593 | 295 | 124 | 3 | 1 | 289 | 1 | 294 | 6.60e-113 | 328 |
| Msa1319290 | MtrunA17_Chr8g0349831 | 54.882 | 297 | 128 | 3 | 3 | 293 | 4 | 300 | 8.89e-113 | 327 |
| Msa1319290 | MtrunA17_Chr8g0349671 | 56.463 | 294 | 122 | 4 | 1 | 289 | 1 | 293 | 1.31e-112 | 327 |
| Msa1319290 | MtrunA17_Chr8g0349751 | 54.515 | 299 | 130 | 3 | 1 | 293 | 51 | 349 | 2.85e-111 | 325 |
| Msa1319290 | MtrunA17_Chr8g0349761 | 54.296 | 291 | 128 | 2 | 7 | 292 | 8 | 298 | 4.89e-111 | 323 |
| Msa1319290 | MtrunA17_Chr8g0349741 | 54.762 | 294 | 125 | 4 | 1 | 293 | 1 | 287 | 4.47e-110 | 320 |
| Msa1319290 | MtrunA17_Chr8g0349771 | 52.349 | 298 | 137 | 2 | 1 | 293 | 1 | 298 | 4.24e-109 | 318 |
| Msa1319290 | MtrunA17_Chr7g0247031 | 54.671 | 289 | 121 | 5 | 7 | 293 | 8 | 288 | 2.28e-108 | 316 |
| Msa1319290 | MtrunA17_Chr5g0425391 | 53.716 | 296 | 133 | 2 | 1 | 293 | 1 | 295 | 1.67e-106 | 311 |
| Msa1319290 | MtrunA17_Chr3g0118511 | 48.148 | 297 | 143 | 4 | 7 | 293 | 3 | 298 | 1.11e-88 | 266 |
| Msa1319290 | MtrunA17_Chr8g0349651 | 51.515 | 264 | 121 | 4 | 31 | 289 | 10 | 271 | 1.46e-87 | 263 |
| Msa1319290 | MtrunA17_Chr7g0267881 | 46.825 | 252 | 102 | 3 | 7 | 250 | 9 | 236 | 1.43e-74 | 228 |
| Msa1319290 | MtrunA17_Chr3g0131521 | 37.162 | 296 | 154 | 5 | 9 | 293 | 37 | 311 | 4.57e-62 | 199 |
| Msa1319290 | MtrunA17_Chr1g0160511 | 35.811 | 296 | 158 | 5 | 9 | 293 | 42 | 316 | 5.96e-58 | 188 |
| Msa1319290 | MtrunA17_Chr5g0437701 | 63.934 | 122 | 44 | 0 | 172 | 293 | 7 | 128 | 1.50e-52 | 168 |
| Msa1319290 | MtrunA17_Chr8g0385581 | 32.770 | 296 | 170 | 5 | 9 | 293 | 39 | 316 | 6.16e-50 | 167 |
| Msa1319290 | MtrunA17_Chr4g0045691 | 32.544 | 169 | 98 | 5 | 131 | 286 | 1 | 166 | 1.08e-23 | 95.1 |
| Msa1319290 | MtrunA17_Chr4g0045711 | 48.276 | 87 | 40 | 3 | 9 | 90 | 24 | 110 | 1.93e-14 | 68.6 |
| Msa1319290 | MtrunA17_Chr6g0466681 | 30.380 | 158 | 81 | 3 | 10 | 162 | 70 | 203 | 2.74e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319290 | AT3G61220.1 | 54.730 | 296 | 131 | 3 | 1 | 293 | 1 | 296 | 1.23e-114 | 332 |
| Msa1319290 | AT3G61220.2 | 55.172 | 290 | 127 | 3 | 7 | 293 | 14 | 303 | 7.37e-113 | 328 |
| Msa1319290 | AT3G61220.3 | 55.172 | 290 | 127 | 3 | 7 | 293 | 38 | 327 | 2.10e-112 | 328 |
| Msa1319290 | AT2G24190.1 | 52.703 | 296 | 137 | 3 | 1 | 293 | 1 | 296 | 5.41e-109 | 318 |
| Msa1319290 | AT2G24190.2 | 52.759 | 290 | 134 | 3 | 7 | 293 | 12 | 301 | 5.87e-107 | 313 |
| Msa1319290 | AT1G01800.1 | 53.147 | 286 | 130 | 3 | 4 | 285 | 2 | 287 | 2.69e-103 | 303 |
| Msa1319290 | AT1G01800.2 | 51.010 | 198 | 95 | 1 | 90 | 285 | 55 | 252 | 9.15e-66 | 207 |
| Msa1319290 | AT5G51030.1 | 35.333 | 300 | 162 | 5 | 5 | 293 | 36 | 314 | 7.37e-58 | 188 |
| Msa1319290 | AT3G59710.1 | 37.589 | 282 | 151 | 7 | 9 | 286 | 31 | 291 | 3.14e-55 | 181 |
| Msa1319290 | AT3G59710.3 | 37.589 | 282 | 151 | 7 | 9 | 286 | 21 | 281 | 3.78e-55 | 181 |
| Msa1319290 | AT3G59710.2 | 37.589 | 282 | 151 | 7 | 9 | 286 | 50 | 310 | 1.30e-54 | 180 |
| Msa1319290 | AT5G61830.1 | 37.037 | 297 | 156 | 6 | 9 | 293 | 39 | 316 | 2.47e-52 | 174 |
| Msa1319290 | AT5G61830.2 | 37.037 | 297 | 156 | 6 | 9 | 293 | 39 | 316 | 2.47e-52 | 174 |
| Msa1319290 | AT5G50700.1 | 32.692 | 156 | 86 | 4 | 7 | 162 | 48 | 184 | 5.45e-13 | 68.9 |
| Msa1319290 | AT5G50600.1 | 32.692 | 156 | 86 | 4 | 7 | 162 | 48 | 184 | 5.45e-13 | 68.9 |
Find 55 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGGCCAACATTTGTTTC+TGG | 0.189389 | 8_4:-22225382 | Msa1319290:CDS |
| GAGTTCATCAAAATCCAATT+TGG | 0.251329 | 8_4:-22227067 | Msa1319290:CDS |
| TTATGGGATATGCAAGAAAT+TGG | 0.259442 | 8_4:-22227239 | Msa1319290:CDS |
| AGATATCAAGCTTCCCAAAT+TGG | 0.260041 | 8_4:+22227053 | None:intergenic |
| TGGAGAGAATGTTGTTAAAA+AGG | 0.269327 | 8_4:-22226917 | Msa1319290:intron |
| ACTTGTAACAGGAGCTAATA+AGG | 0.275992 | 8_4:-22227269 | Msa1319290:CDS |
| TTGCCAGATGATGGCCCTTC+TGG | 0.284677 | 8_4:-22225187 | Msa1319290:CDS |
| GCTAATAAGGGAATTGGTTA+TGG | 0.306274 | 8_4:-22227256 | Msa1319290:CDS |
| TCTAGGTATGCACTTGTAAC+AGG | 0.329038 | 8_4:-22227280 | Msa1319290:intron |
| ACTTCTCTTGCCCACTCATT+TGG | 0.338248 | 8_4:+22225499 | None:intergenic |
| GTGAACAATGCTGGTGTTGC+TGG | 0.338979 | 8_4:-22226952 | Msa1319290:CDS |
| ATTTGGGAAGCTTGATATCT+TGG | 0.349168 | 8_4:-22227050 | Msa1319290:intron |
| CTCTAGACGTGGACAATTCA+AGG | 0.383442 | 8_4:-22226004 | Msa1319290:intron |
| ATTGGCTTCAAGAGGTGTTA+TGG | 0.387557 | 8_4:-22227221 | Msa1319290:CDS |
| GTAGAAAGTTTGAAAGAGTT+AGG | 0.388081 | 8_4:-22227157 | Msa1319290:CDS |
| TGTGTGGAAATAAACTTCTT+TGG | 0.388308 | 8_4:-22226099 | Msa1319290:CDS |
| ATATCAGTCTTAACAAAGTC+AGG | 0.388627 | 8_4:+22225274 | None:intergenic |
| CAATGACAGAAGCATCAAAA+AGG | 0.391122 | 8_4:-22227405 | Msa1319290:intron |
| AGTTCATCAAAATCCAATTT+GGG | 0.398379 | 8_4:-22227066 | Msa1319290:CDS |
| ACTAAAGAAGAAACACTTGT+AGG | 0.407989 | 8_4:+22227091 | None:intergenic |
| ACAGGAGCTAATAAGGGAAT+TGG | 0.408672 | 8_4:-22227262 | Msa1319290:CDS |
| AGACCAGAAGGGCCATCATC+TGG | 0.442885 | 8_4:+22225184 | None:intergenic |
| CTAATAAGGGAATTGGTTAT+GGG | 0.448020 | 8_4:-22227255 | Msa1319290:CDS |
| AGAGGAAACATTGACAATCC+TGG | 0.459729 | 8_4:+22226023 | None:intergenic |
| CTAAAGAAGAAACACTTGTA+GGG | 0.491807 | 8_4:+22227092 | None:intergenic |
| TGAAGTAGATAGTTGGAGCA+GGG | 0.493585 | 8_4:+22226047 | None:intergenic |
| CTGATATTAACGAGATGAAA+GGG | 0.496322 | 8_4:-22225258 | Msa1319290:CDS |
| ACTGCTAGAAATGAGAAAAG+AGG | 0.505341 | 8_4:-22227190 | Msa1319290:CDS |
| TCCTGGGTGAAGTAGATAGT+TGG | 0.520218 | 8_4:+22226040 | None:intergenic |
| GGCAACAATGCTAGATTCAC+AGG | 0.526880 | 8_4:+22225205 | None:intergenic |
| CTAGCATTGTTGCCAGATGA+TGG | 0.529228 | 8_4:-22225196 | Msa1319290:CDS |
| GAGGAAACATTGACAATCCT+GGG | 0.531169 | 8_4:+22226024 | None:intergenic |
| AGATTACAAAGAAGGAGCAT+TGG | 0.531996 | 8_4:-22225413 | Msa1319290:CDS |
| GTGAAGTAGATAGTTGGAGC+AGG | 0.535763 | 8_4:+22226046 | None:intergenic |
| CTTGAATTGTCCACGTCTAG+AGG | 0.537040 | 8_4:+22226005 | None:intergenic |
| CTTGTAACAGGAGCTAATAA+GGG | 0.542533 | 8_4:-22227268 | Msa1319290:CDS |
| CAGCTTTAAATTCTTACACA+AGG | 0.553733 | 8_4:-22225342 | Msa1319290:CDS |
| TAAGGGGTGAAATATCAGAT+TGG | 0.556719 | 8_4:-22226161 | Msa1319290:CDS |
| TCAGTTTATGCCAAATGAGT+GGG | 0.561914 | 8_4:-22225509 | Msa1319290:intron |
| GTCAGTTTATGCCAAATGAG+TGG | 0.564275 | 8_4:-22225510 | Msa1319290:intron |
| GAAGTAGATAGTTGGAGCAG+GGG | 0.571101 | 8_4:+22226048 | None:intergenic |
| TTTGGATAGGTGAACAATGC+TGG | 0.577708 | 8_4:-22226961 | Msa1319290:intron |
| ACTGATATTAACGAGATGAA+AGG | 0.577779 | 8_4:-22225259 | Msa1319290:CDS |
| TGCAAGAAATTGGCTTCAAG+AGG | 0.591172 | 8_4:-22227229 | Msa1319290:CDS |
| ATTTGTTTCTGGTTACACAA+TGG | 0.603998 | 8_4:-22225371 | Msa1319290:CDS |
| GTTGCTGGAGGAATAGTGAA+TGG | 0.611511 | 8_4:-22226937 | Msa1319290:CDS |
| CACAATTTATGCGGAAACGA+GGG | 0.612527 | 8_4:+22225302 | None:intergenic |
| ACACAATTTATGCGGAAACG+AGG | 0.622206 | 8_4:+22225301 | None:intergenic |
| TATCAGTCTTAACAAAGTCA+GGG | 0.628316 | 8_4:+22225275 | None:intergenic |
| TGAATTAGCTGAAGAATGTG+TGG | 0.629846 | 8_4:-22226115 | Msa1319290:CDS |
| GTCAATGTTTCCTCTAGACG+TGG | 0.634959 | 8_4:-22226015 | Msa1319290:CDS |
| GTGTAACCAGAAACAAATGT+TGG | 0.648385 | 8_4:+22225376 | None:intergenic |
| AACAATGCTGGTGTTGCTGG+AGG | 0.655043 | 8_4:-22226949 | Msa1319290:CDS |
| TCCAACTATCTACTTCACCC+AGG | 0.691403 | 8_4:-22226041 | Msa1319290:CDS |
| CAGGGCATACACAATTTATG+CGG | 0.694860 | 8_4:+22225293 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATTTTTTATTTTTT+TGG | + | chr8_4:22226622-22226641 | None:intergenic | 0.0% |
| !!! | TTATTTATTTTTTATTTTTT+TGG | + | chr8_4:22226622-22226641 | None:intergenic | 0.0% |
| !! | TCAGTAATTAAATTAATTAT+TGG | - | chr8_4:22226815-22226834 | Msa1319290:intron | 10.0% |
| !! | TCAGTAATTAAATTAATTAT+TGG | - | chr8_4:22226815-22226834 | Msa1319290:intron | 10.0% |
| !! | ATATATATGTGAAGAAAAAA+AGG | + | chr8_4:22225190-22225209 | None:intergenic | 15.0% |
| !!! | ATAAAGTTGATTTATACATT+TGG | - | chr8_4:22225571-22225590 | Msa1319290:intron | 15.0% |
| !! | GTAATTAAATTAATTATTGG+TGG | - | chr8_4:22226818-22226837 | Msa1319290:intron | 15.0% |
| !! | ATATATATGTGAAGAAAAAA+AGG | + | chr8_4:22225190-22225209 | None:intergenic | 15.0% |
| !!! | ATAAAGTTGATTTATACATT+TGG | - | chr8_4:22225571-22225590 | Msa1319290:intron | 15.0% |
| !! | GTAATTAAATTAATTATTGG+TGG | - | chr8_4:22226818-22226837 | Msa1319290:intron | 15.0% |
| !!! | AGAATATGTTTTCTACAATA+AGG | + | chr8_4:22225666-22225685 | None:intergenic | 20.0% |
| !!! | TATATTCGGTATTTACTTTT+CGG | - | chr8_4:22226255-22226274 | Msa1319290:intron | 20.0% |
| !! | AAGACAAAAAATTGATTACA+TGG | - | chr8_4:22226346-22226365 | Msa1319290:intron | 20.0% |
| !! | ATGCAAAAAATAATCATTGA+GGG | + | chr8_4:22226869-22226888 | None:intergenic | 20.0% |
| !! | AATGCAAAAAATAATCATTG+AGG | + | chr8_4:22226870-22226889 | None:intergenic | 20.0% |
| !!! | TCAATGATTATTTTTTGCAT+TGG | - | chr8_4:22226869-22226888 | Msa1319290:intron | 20.0% |
| !!! | TTTTTGAAAGATTACAAAGA+AGG | - | chr8_4:22227129-22227148 | Msa1319290:CDS | 20.0% |
| !!! | AGAATATGTTTTCTACAATA+AGG | + | chr8_4:22225666-22225685 | None:intergenic | 20.0% |
| !!! | TATATTCGGTATTTACTTTT+CGG | - | chr8_4:22226255-22226274 | Msa1319290:intron | 20.0% |
| !! | AAGACAAAAAATTGATTACA+TGG | - | chr8_4:22226346-22226365 | Msa1319290:intron | 20.0% |
| !! | ATGCAAAAAATAATCATTGA+GGG | + | chr8_4:22226869-22226888 | None:intergenic | 20.0% |
| !! | AATGCAAAAAATAATCATTG+AGG | + | chr8_4:22226870-22226889 | None:intergenic | 20.0% |
| !!! | TCAATGATTATTTTTTGCAT+TGG | - | chr8_4:22226869-22226888 | Msa1319290:intron | 20.0% |
| !!! | TTTTTGAAAGATTACAAAGA+AGG | - | chr8_4:22227129-22227148 | Msa1319290:CDS | 20.0% |
| ! | CAACAAGTTTGATCATAATT+AGG | - | chr8_4:22225218-22225237 | Msa1319290:CDS | 25.0% |
| ! | AGTTCATCAAAATCCAATTT+GGG | - | chr8_4:22225484-22225503 | Msa1319290:CDS | 25.0% |
| !! | TATTGACTAACAAGTTAAGA+AGG | + | chr8_4:22225554-22225573 | None:intergenic | 25.0% |
| !! | GTTGATTTATACATTTGGAT+AGG | - | chr8_4:22225576-22225595 | Msa1319290:intron | 25.0% |
| ! | ATATAAAAGATGACTACAGA+TGG | + | chr8_4:22225957-22225976 | None:intergenic | 25.0% |
| ! | CTATTATAGACAAAAAGTTG+TGG | + | chr8_4:22226190-22226209 | None:intergenic | 25.0% |
| ! | CAAAAAAATATTCTCATTGC+AGG | + | chr8_4:22226322-22226341 | None:intergenic | 25.0% |
| !!! | CTGCAATGAGAATATTTTTT+TGG | - | chr8_4:22226320-22226339 | Msa1319290:intron | 25.0% |
| !!! | TGGTATTGATTTGATTTTGT+AGG | - | chr8_4:22226366-22226385 | Msa1319290:intron | 25.0% |
| !!! | TTGATTTGATTTTGTAGGTA+AGG | - | chr8_4:22226371-22226390 | Msa1319290:intron | 25.0% |
| !!! | TGATTTGATTTTGTAGGTAA+GGG | - | chr8_4:22226372-22226391 | Msa1319290:intron | 25.0% |
| ! | ACAAATATGCAATTTACTAC+TGG | - | chr8_4:22226660-22226679 | Msa1319290:intron | 25.0% |
| ! | AATTTGATGAATTCTCATAG+TGG | + | chr8_4:22226754-22226773 | None:intergenic | 25.0% |
| ! | AACGTTACAAATGAAAAACT+TGG | - | chr8_4:22227090-22227109 | Msa1319290:CDS | 25.0% |
| ! | GTAAAAAAAATAGACCAGAA+GGG | + | chr8_4:22227380-22227399 | None:intergenic | 25.0% |
| ! | TGTAAAAAAAATAGACCAGA+AGG | + | chr8_4:22227381-22227400 | None:intergenic | 25.0% |
| ! | CAACAAGTTTGATCATAATT+AGG | - | chr8_4:22225218-22225237 | Msa1319290:CDS | 25.0% |
| ! | AGTTCATCAAAATCCAATTT+GGG | - | chr8_4:22225484-22225503 | Msa1319290:CDS | 25.0% |
| !! | TATTGACTAACAAGTTAAGA+AGG | + | chr8_4:22225554-22225573 | None:intergenic | 25.0% |
| !! | GTTGATTTATACATTTGGAT+AGG | - | chr8_4:22225576-22225595 | Msa1319290:intron | 25.0% |
| ! | ATATAAAAGATGACTACAGA+TGG | + | chr8_4:22225957-22225976 | None:intergenic | 25.0% |
| ! | CTATTATAGACAAAAAGTTG+TGG | + | chr8_4:22226190-22226209 | None:intergenic | 25.0% |
| ! | CAAAAAAATATTCTCATTGC+AGG | + | chr8_4:22226322-22226341 | None:intergenic | 25.0% |
| !!! | CTGCAATGAGAATATTTTTT+TGG | - | chr8_4:22226320-22226339 | Msa1319290:intron | 25.0% |
| !!! | TGGTATTGATTTGATTTTGT+AGG | - | chr8_4:22226366-22226385 | Msa1319290:intron | 25.0% |
| !!! | TTGATTTGATTTTGTAGGTA+AGG | - | chr8_4:22226371-22226390 | Msa1319290:intron | 25.0% |
| !!! | TGATTTGATTTTGTAGGTAA+GGG | - | chr8_4:22226372-22226391 | Msa1319290:intron | 25.0% |
| ! | ACAAATATGCAATTTACTAC+TGG | - | chr8_4:22226660-22226679 | Msa1319290:intron | 25.0% |
| ! | AATTTGATGAATTCTCATAG+TGG | + | chr8_4:22226754-22226773 | None:intergenic | 25.0% |
| ! | AACGTTACAAATGAAAAACT+TGG | - | chr8_4:22227090-22227109 | Msa1319290:CDS | 25.0% |
| ! | GTAAAAAAAATAGACCAGAA+GGG | + | chr8_4:22227380-22227399 | None:intergenic | 25.0% |
| ! | TGTAAAAAAAATAGACCAGA+AGG | + | chr8_4:22227381-22227400 | None:intergenic | 25.0% |
| AGAAAAAAAGGCAAAGGAAA+AGG | + | chr8_4:22225178-22225197 | None:intergenic | 30.0% | |
| ATGTGAAGAAAAAAAGGCAA+AGG | + | chr8_4:22225184-22225203 | None:intergenic | 30.0% | |
| ! | ACCTTGTTAATCTTGTTTCT+AGG | - | chr8_4:22225253-22225272 | Msa1319290:CDS | 30.0% |
| ACCTAGAAACAAGATTAACA+AGG | + | chr8_4:22225257-22225276 | None:intergenic | 30.0% | |
| CTAATAAGGGAATTGGTTAT+GGG | - | chr8_4:22225295-22225314 | Msa1319290:CDS | 30.0% | |
| TTATGGGATATGCAAGAAAT+TGG | - | chr8_4:22225311-22225330 | Msa1319290:CDS | 30.0% | |
| GTAGAAAGTTTGAAAGAGTT+AGG | - | chr8_4:22225393-22225412 | Msa1319290:CDS | 30.0% | |
| CTAAAGAAGAAACACTTGTA+GGG | + | chr8_4:22225461-22225480 | None:intergenic | 30.0% | |
| ACTAAAGAAGAAACACTTGT+AGG | + | chr8_4:22225462-22225481 | None:intergenic | 30.0% | |
| GAGTTCATCAAAATCCAATT+TGG | - | chr8_4:22225483-22225502 | Msa1319290:CDS | 30.0% | |
| TGGAGAGAATGTTGTTAAAA+AGG | - | chr8_4:22225633-22225652 | Msa1319290:intron | 30.0% | |
| !! | ATCGTTTAGTCTTGATAGAA+CGG | - | chr8_4:22225733-22225752 | Msa1319290:intron | 30.0% |
| AACATAAGGCAAAACAACAT+TGG | + | chr8_4:22226218-22226237 | None:intergenic | 30.0% | |
| ! | CTGTCATGTCTTGTTATATT+CGG | - | chr8_4:22226241-22226260 | Msa1319290:intron | 30.0% |
| !! | GATTTGATTTTGTAGGTAAG+GGG | - | chr8_4:22226373-22226392 | Msa1319290:intron | 30.0% |
| TGTGTGGAAATAAACTTCTT+TGG | - | chr8_4:22226451-22226470 | Msa1319290:intron | 30.0% | |
| !! | GAGCATTGGAAACAAAAAAT+TGG | - | chr8_4:22227151-22227170 | Msa1319290:CDS | 30.0% |
| !! | ATTTGTTTCTGGTTACACAA+TGG | - | chr8_4:22227179-22227198 | Msa1319290:CDS | 30.0% |
| !! | CAGCTTTAAATTCTTACACA+AGG | - | chr8_4:22227208-22227227 | Msa1319290:CDS | 30.0% |
| TATCAGTCTTAACAAAGTCA+GGG | + | chr8_4:22227278-22227297 | None:intergenic | 30.0% | |
| ATATCAGTCTTAACAAAGTC+AGG | + | chr8_4:22227279-22227298 | None:intergenic | 30.0% | |
| ACTGATATTAACGAGATGAA+AGG | - | chr8_4:22227291-22227310 | Msa1319290:intron | 30.0% | |
| CTGATATTAACGAGATGAAA+GGG | - | chr8_4:22227292-22227311 | Msa1319290:intron | 30.0% | |
| AGAAAAAAAGGCAAAGGAAA+AGG | + | chr8_4:22225178-22225197 | None:intergenic | 30.0% | |
| ATGTGAAGAAAAAAAGGCAA+AGG | + | chr8_4:22225184-22225203 | None:intergenic | 30.0% | |
| ! | ACCTTGTTAATCTTGTTTCT+AGG | - | chr8_4:22225253-22225272 | Msa1319290:CDS | 30.0% |
| ACCTAGAAACAAGATTAACA+AGG | + | chr8_4:22225257-22225276 | None:intergenic | 30.0% | |
| CTAATAAGGGAATTGGTTAT+GGG | - | chr8_4:22225295-22225314 | Msa1319290:CDS | 30.0% | |
| TTATGGGATATGCAAGAAAT+TGG | - | chr8_4:22225311-22225330 | Msa1319290:CDS | 30.0% | |
| GTAGAAAGTTTGAAAGAGTT+AGG | - | chr8_4:22225393-22225412 | Msa1319290:CDS | 30.0% | |
| CTAAAGAAGAAACACTTGTA+GGG | + | chr8_4:22225461-22225480 | None:intergenic | 30.0% | |
| ACTAAAGAAGAAACACTTGT+AGG | + | chr8_4:22225462-22225481 | None:intergenic | 30.0% | |
| GAGTTCATCAAAATCCAATT+TGG | - | chr8_4:22225483-22225502 | Msa1319290:CDS | 30.0% | |
| TGGAGAGAATGTTGTTAAAA+AGG | - | chr8_4:22225633-22225652 | Msa1319290:intron | 30.0% | |
| !! | ATCGTTTAGTCTTGATAGAA+CGG | - | chr8_4:22225733-22225752 | Msa1319290:intron | 30.0% |
| AACATAAGGCAAAACAACAT+TGG | + | chr8_4:22226218-22226237 | None:intergenic | 30.0% | |
| ! | CTGTCATGTCTTGTTATATT+CGG | - | chr8_4:22226241-22226260 | Msa1319290:intron | 30.0% |
| !! | GATTTGATTTTGTAGGTAAG+GGG | - | chr8_4:22226373-22226392 | Msa1319290:intron | 30.0% |
| TGTGTGGAAATAAACTTCTT+TGG | - | chr8_4:22226451-22226470 | Msa1319290:intron | 30.0% | |
| !! | GAGCATTGGAAACAAAAAAT+TGG | - | chr8_4:22227151-22227170 | Msa1319290:CDS | 30.0% |
| !! | ATTTGTTTCTGGTTACACAA+TGG | - | chr8_4:22227179-22227198 | Msa1319290:CDS | 30.0% |
| !! | CAGCTTTAAATTCTTACACA+AGG | - | chr8_4:22227208-22227227 | Msa1319290:CDS | 30.0% |
| TATCAGTCTTAACAAAGTCA+GGG | + | chr8_4:22227278-22227297 | None:intergenic | 30.0% | |
| ATATCAGTCTTAACAAAGTC+AGG | + | chr8_4:22227279-22227298 | None:intergenic | 30.0% | |
| ACTGATATTAACGAGATGAA+AGG | - | chr8_4:22227291-22227310 | Msa1319290:intron | 30.0% | |
| CTGATATTAACGAGATGAAA+GGG | - | chr8_4:22227292-22227311 | Msa1319290:intron | 30.0% | |
| ACTTGTAACAGGAGCTAATA+AGG | - | chr8_4:22225281-22225300 | Msa1319290:CDS | 35.0% | |
| CTTGTAACAGGAGCTAATAA+GGG | - | chr8_4:22225282-22225301 | Msa1319290:CDS | 35.0% | |
| GCTAATAAGGGAATTGGTTA+TGG | - | chr8_4:22225294-22225313 | Msa1319290:CDS | 35.0% | |
| ACTGCTAGAAATGAGAAAAG+AGG | - | chr8_4:22225360-22225379 | Msa1319290:CDS | 35.0% | |
| AGATATCAAGCTTCCCAAAT+TGG | + | chr8_4:22225500-22225519 | None:intergenic | 35.0% | |
| ATTTGGGAAGCTTGATATCT+TGG | - | chr8_4:22225500-22225519 | Msa1319290:CDS | 35.0% | |
| !! | AAGCATCGTTTAGTCTTGAT+CGG | - | chr8_4:22225729-22225748 | Msa1319290:intron | 35.0% |
| TCACAAACATGACAAACTAG+AGG | - | chr8_4:22226117-22226136 | Msa1319290:CDS | 35.0% | |
| TAAGGGGTGAAATATCAGAT+TGG | - | chr8_4:22226389-22226408 | Msa1319290:intron | 35.0% | |
| TGAATTAGCTGAAGAATGTG+TGG | - | chr8_4:22226435-22226454 | Msa1319290:intron | 35.0% | |
| TTTACTACTGGCACAACATA+CGG | - | chr8_4:22226672-22226691 | Msa1319290:intron | 35.0% | |
| ! | AGGGCTTTTTGCATTATTGA+GGG | + | chr8_4:22226850-22226869 | None:intergenic | 35.0% |
| CTTGAGATTGAAGATGTGTT+TGG | + | chr8_4:22226976-22226995 | None:intergenic | 35.0% | |
| ACATCTTCAATCTCAAGTGT+CGG | - | chr8_4:22226979-22226998 | Msa1319290:intron | 35.0% | |
| TCAGTTTATGCCAAATGAGT+GGG | - | chr8_4:22227041-22227060 | Msa1319290:intron | 35.0% | |
| ! | AGATTACAAAGAAGGAGCAT+TGG | - | chr8_4:22227137-22227156 | Msa1319290:CDS | 35.0% |
| AATTGGCCAACATTTGTTTC+TGG | - | chr8_4:22227168-22227187 | Msa1319290:CDS | 35.0% | |
| GTGTAACCAGAAACAAATGT+TGG | + | chr8_4:22227177-22227196 | None:intergenic | 35.0% | |
| !!! | GGGTTTTTAAGCATTGATGA+AGG | - | chr8_4:22227312-22227331 | Msa1319290:intron | 35.0% |
| ACTTGTAACAGGAGCTAATA+AGG | - | chr8_4:22225281-22225300 | Msa1319290:CDS | 35.0% | |
| CTTGTAACAGGAGCTAATAA+GGG | - | chr8_4:22225282-22225301 | Msa1319290:CDS | 35.0% | |
| GCTAATAAGGGAATTGGTTA+TGG | - | chr8_4:22225294-22225313 | Msa1319290:CDS | 35.0% | |
| ACTGCTAGAAATGAGAAAAG+AGG | - | chr8_4:22225360-22225379 | Msa1319290:CDS | 35.0% | |
| AGATATCAAGCTTCCCAAAT+TGG | + | chr8_4:22225500-22225519 | None:intergenic | 35.0% | |
| ATTTGGGAAGCTTGATATCT+TGG | - | chr8_4:22225500-22225519 | Msa1319290:CDS | 35.0% | |
| !! | AAGCATCGTTTAGTCTTGAT+CGG | - | chr8_4:22225729-22225748 | Msa1319290:intron | 35.0% |
| TCACAAACATGACAAACTAG+AGG | - | chr8_4:22226117-22226136 | Msa1319290:CDS | 35.0% | |
| TAAGGGGTGAAATATCAGAT+TGG | - | chr8_4:22226389-22226408 | Msa1319290:intron | 35.0% | |
| TGAATTAGCTGAAGAATGTG+TGG | - | chr8_4:22226435-22226454 | Msa1319290:intron | 35.0% | |
| TTTACTACTGGCACAACATA+CGG | - | chr8_4:22226672-22226691 | Msa1319290:intron | 35.0% | |
| ! | AGGGCTTTTTGCATTATTGA+GGG | + | chr8_4:22226850-22226869 | None:intergenic | 35.0% |
| CTTGAGATTGAAGATGTGTT+TGG | + | chr8_4:22226976-22226995 | None:intergenic | 35.0% | |
| ACATCTTCAATCTCAAGTGT+CGG | - | chr8_4:22226979-22226998 | Msa1319290:intron | 35.0% | |
| TCAGTTTATGCCAAATGAGT+GGG | - | chr8_4:22227041-22227060 | Msa1319290:intron | 35.0% | |
| ! | AGATTACAAAGAAGGAGCAT+TGG | - | chr8_4:22227137-22227156 | Msa1319290:CDS | 35.0% |
| AATTGGCCAACATTTGTTTC+TGG | - | chr8_4:22227168-22227187 | Msa1319290:CDS | 35.0% | |
| GTGTAACCAGAAACAAATGT+TGG | + | chr8_4:22227177-22227196 | None:intergenic | 35.0% | |
| !!! | GGGTTTTTAAGCATTGATGA+AGG | - | chr8_4:22227312-22227331 | Msa1319290:intron | 35.0% |
| TCTAGGTATGCACTTGTAAC+AGG | - | chr8_4:22225270-22225289 | Msa1319290:CDS | 40.0% | |
| ACAGGAGCTAATAAGGGAAT+TGG | - | chr8_4:22225288-22225307 | Msa1319290:CDS | 40.0% | |
| ! | TGCAAGAAATTGGCTTCAAG+AGG | - | chr8_4:22225321-22225340 | Msa1319290:CDS | 40.0% |
| !! | ATTGGCTTCAAGAGGTGTTA+TGG | - | chr8_4:22225329-22225348 | Msa1319290:CDS | 40.0% |
| TTTGGATAGGTGAACAATGC+TGG | - | chr8_4:22225589-22225608 | Msa1319290:intron | 40.0% | |
| ATGCTGACAACAAGAATGCA+TGG | + | chr8_4:22225707-22225726 | None:intergenic | 40.0% | |
| !! | ATCGTTTAGTCTTGATCGGA+TGG | - | chr8_4:22225816-22225835 | Msa1319290:intron | 40.0% |
| TCAAATCCAACCAAGATGCA+TGG | - | chr8_4:22225907-22225926 | Msa1319290:intron | 40.0% | |
| ATAGACAAAAAGTTGTGGCG+TGG | + | chr8_4:22226185-22226204 | None:intergenic | 40.0% | |
| AGACATGACAGCACAACATA+AGG | + | chr8_4:22226232-22226251 | None:intergenic | 40.0% | |
| TGAAGTAGATAGTTGGAGCA+GGG | + | chr8_4:22226506-22226525 | None:intergenic | 40.0% | |
| GAGGAAACATTGACAATCCT+GGG | + | chr8_4:22226529-22226548 | None:intergenic | 40.0% | |
| AGAGGAAACATTGACAATCC+TGG | + | chr8_4:22226530-22226549 | None:intergenic | 40.0% | |
| ! | GAGGGCTTTTTGCATTATTG+AGG | + | chr8_4:22226851-22226870 | None:intergenic | 40.0% |
| TGTCAATATCGTGTCAGTGT+CGG | - | chr8_4:22226945-22226964 | Msa1319290:CDS | 40.0% | |
| GTCAGTTTATGCCAAATGAG+TGG | - | chr8_4:22227040-22227059 | Msa1319290:intron | 40.0% | |
| CACAATTTATGCGGAAACGA+GGG | + | chr8_4:22227251-22227270 | None:intergenic | 40.0% | |
| ACACAATTTATGCGGAAACG+AGG | + | chr8_4:22227252-22227271 | None:intergenic | 40.0% | |
| CAGGGCATACACAATTTATG+CGG | + | chr8_4:22227260-22227279 | None:intergenic | 40.0% | |
| TCTAGGTATGCACTTGTAAC+AGG | - | chr8_4:22225270-22225289 | Msa1319290:CDS | 40.0% | |
| ACAGGAGCTAATAAGGGAAT+TGG | - | chr8_4:22225288-22225307 | Msa1319290:CDS | 40.0% | |
| ! | TGCAAGAAATTGGCTTCAAG+AGG | - | chr8_4:22225321-22225340 | Msa1319290:CDS | 40.0% |
| !! | ATTGGCTTCAAGAGGTGTTA+TGG | - | chr8_4:22225329-22225348 | Msa1319290:CDS | 40.0% |
| TTTGGATAGGTGAACAATGC+TGG | - | chr8_4:22225589-22225608 | Msa1319290:intron | 40.0% | |
| ATGCTGACAACAAGAATGCA+TGG | + | chr8_4:22225707-22225726 | None:intergenic | 40.0% | |
| !! | ATCGTTTAGTCTTGATCGGA+TGG | - | chr8_4:22225816-22225835 | Msa1319290:intron | 40.0% |
| TCAAATCCAACCAAGATGCA+TGG | - | chr8_4:22225907-22225926 | Msa1319290:intron | 40.0% | |
| ATAGACAAAAAGTTGTGGCG+TGG | + | chr8_4:22226185-22226204 | None:intergenic | 40.0% | |
| AGACATGACAGCACAACATA+AGG | + | chr8_4:22226232-22226251 | None:intergenic | 40.0% | |
| TGAAGTAGATAGTTGGAGCA+GGG | + | chr8_4:22226506-22226525 | None:intergenic | 40.0% | |
| GAGGAAACATTGACAATCCT+GGG | + | chr8_4:22226529-22226548 | None:intergenic | 40.0% | |
| AGAGGAAACATTGACAATCC+TGG | + | chr8_4:22226530-22226549 | None:intergenic | 40.0% | |
| ! | GAGGGCTTTTTGCATTATTG+AGG | + | chr8_4:22226851-22226870 | None:intergenic | 40.0% |
| TGTCAATATCGTGTCAGTGT+CGG | - | chr8_4:22226945-22226964 | Msa1319290:CDS | 40.0% | |
| GTCAGTTTATGCCAAATGAG+TGG | - | chr8_4:22227040-22227059 | Msa1319290:intron | 40.0% | |
| CACAATTTATGCGGAAACGA+GGG | + | chr8_4:22227251-22227270 | None:intergenic | 40.0% | |
| ACACAATTTATGCGGAAACG+AGG | + | chr8_4:22227252-22227271 | None:intergenic | 40.0% | |
| CAGGGCATACACAATTTATG+CGG | + | chr8_4:22227260-22227279 | None:intergenic | 40.0% | |
| TGGGAAGCTTGATATCTTGG+TGG | - | chr8_4:22225503-22225522 | Msa1319290:CDS | 45.0% | |
| GGGAAGCTTGATATCTTGGT+GGG | - | chr8_4:22225504-22225523 | Msa1319290:CDS | 45.0% | |
| GTTGCTGGAGGAATAGTGAA+TGG | - | chr8_4:22225613-22225632 | Msa1319290:intron | 45.0% | |
| ! | ATGACTTGCACCATGCATCT+TGG | + | chr8_4:22225920-22225939 | None:intergenic | 45.0% |
| GAAGTAGATAGTTGGAGCAG+GGG | + | chr8_4:22226505-22226524 | None:intergenic | 45.0% | |
| GTGAAGTAGATAGTTGGAGC+AGG | + | chr8_4:22226507-22226526 | None:intergenic | 45.0% | |
| TCCAACTATCTACTTCACCC+AGG | - | chr8_4:22226509-22226528 | Msa1319290:intron | 45.0% | |
| TCCTGGGTGAAGTAGATAGT+TGG | + | chr8_4:22226513-22226532 | None:intergenic | 45.0% | |
| GTCAATGTTTCCTCTAGACG+TGG | - | chr8_4:22226535-22226554 | Msa1319290:intron | 45.0% | |
| CTTGAATTGTCCACGTCTAG+AGG | + | chr8_4:22226548-22226567 | None:intergenic | 45.0% | |
| CTCTAGACGTGGACAATTCA+AGG | - | chr8_4:22226546-22226565 | Msa1319290:intron | 45.0% | |
| ACTTCTCTTGCCCACTCATT+TGG | + | chr8_4:22227054-22227073 | None:intergenic | 45.0% | |
| GGCAACAATGCTAGATTCAC+AGG | + | chr8_4:22227348-22227367 | None:intergenic | 45.0% | |
| CTAGCATTGTTGCCAGATGA+TGG | - | chr8_4:22227354-22227373 | Msa1319290:intron | 45.0% | |
| TGGGAAGCTTGATATCTTGG+TGG | - | chr8_4:22225503-22225522 | Msa1319290:CDS | 45.0% | |
| GGGAAGCTTGATATCTTGGT+GGG | - | chr8_4:22225504-22225523 | Msa1319290:CDS | 45.0% | |
| GTTGCTGGAGGAATAGTGAA+TGG | - | chr8_4:22225613-22225632 | Msa1319290:intron | 45.0% | |
| ! | ATGACTTGCACCATGCATCT+TGG | + | chr8_4:22225920-22225939 | None:intergenic | 45.0% |
| GAAGTAGATAGTTGGAGCAG+GGG | + | chr8_4:22226505-22226524 | None:intergenic | 45.0% | |
| GTGAAGTAGATAGTTGGAGC+AGG | + | chr8_4:22226507-22226526 | None:intergenic | 45.0% | |
| TCCAACTATCTACTTCACCC+AGG | - | chr8_4:22226509-22226528 | Msa1319290:intron | 45.0% | |
| TCCTGGGTGAAGTAGATAGT+TGG | + | chr8_4:22226513-22226532 | None:intergenic | 45.0% | |
| GTCAATGTTTCCTCTAGACG+TGG | - | chr8_4:22226535-22226554 | Msa1319290:intron | 45.0% | |
| CTTGAATTGTCCACGTCTAG+AGG | + | chr8_4:22226548-22226567 | None:intergenic | 45.0% | |
| CTCTAGACGTGGACAATTCA+AGG | - | chr8_4:22226546-22226565 | Msa1319290:intron | 45.0% | |
| ACTTCTCTTGCCCACTCATT+TGG | + | chr8_4:22227054-22227073 | None:intergenic | 45.0% | |
| GGCAACAATGCTAGATTCAC+AGG | + | chr8_4:22227348-22227367 | None:intergenic | 45.0% | |
| CTAGCATTGTTGCCAGATGA+TGG | - | chr8_4:22227354-22227373 | Msa1319290:intron | 45.0% | |
| !!! | TTTTAAATAAATTAAAAAGT+AGG | - | chr8_4:22225784-22225803 | Msa1319290:intron | 5.0% |
| !!! | TTTAAATAAATTTTAAAAGT+AGG | - | chr8_4:22225868-22225887 | Msa1319290:intron | 5.0% |
| !!! | ATTCTATTTTTAAAAATTAT+TGG | + | chr8_4:22226730-22226749 | None:intergenic | 5.0% |
| !!! | TTTTAAATAAATTAAAAAGT+AGG | - | chr8_4:22225784-22225803 | Msa1319290:intron | 5.0% |
| !!! | TTTAAATAAATTTTAAAAGT+AGG | - | chr8_4:22225868-22225887 | Msa1319290:intron | 5.0% |
| !!! | ATTCTATTTTTAAAAATTAT+TGG | + | chr8_4:22226730-22226749 | None:intergenic | 5.0% |
| !! | GTGAACAATGCTGGTGTTGC+TGG | - | chr8_4:22225598-22225617 | Msa1319290:intron | 50.0% |
| !! | AACAATGCTGGTGTTGCTGG+AGG | - | chr8_4:22225601-22225620 | Msa1319290:intron | 50.0% |
| CTTGCACCATGCATCTTGGT+TGG | + | chr8_4:22225916-22225935 | None:intergenic | 50.0% | |
| CGACATGTCAGTAGCATGTC+TGG | + | chr8_4:22226700-22226719 | None:intergenic | 50.0% | |
| !! | GTGAACAATGCTGGTGTTGC+TGG | - | chr8_4:22225598-22225617 | Msa1319290:intron | 50.0% |
| !! | AACAATGCTGGTGTTGCTGG+AGG | - | chr8_4:22225601-22225620 | Msa1319290:intron | 50.0% |
| CTTGCACCATGCATCTTGGT+TGG | + | chr8_4:22225916-22225935 | None:intergenic | 50.0% | |
| CGACATGTCAGTAGCATGTC+TGG | + | chr8_4:22226700-22226719 | None:intergenic | 50.0% | |
| GTTGTGGCGTGGTTTAGCGA+GGG | + | chr8_4:22226174-22226193 | None:intergenic | 55.0% | |
| AGTTGTGGCGTGGTTTAGCG+AGG | + | chr8_4:22226175-22226194 | None:intergenic | 55.0% | |
| ! | TTGCCAGATGATGGCCCTTC+TGG | - | chr8_4:22227363-22227382 | Msa1319290:intron | 55.0% |
| AGACCAGAAGGGCCATCATC+TGG | + | chr8_4:22227369-22227388 | None:intergenic | 55.0% | |
| GTTGTGGCGTGGTTTAGCGA+GGG | + | chr8_4:22226174-22226193 | None:intergenic | 55.0% | |
| AGTTGTGGCGTGGTTTAGCG+AGG | + | chr8_4:22226175-22226194 | None:intergenic | 55.0% | |
| ! | TTGCCAGATGATGGCCCTTC+TGG | - | chr8_4:22227363-22227382 | Msa1319290:intron | 55.0% |
| AGACCAGAAGGGCCATCATC+TGG | + | chr8_4:22227369-22227388 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 22225147 | 22227425 | 22225147 | ID=Msa1319290;Name=Msa1319290 |
| chr8_4 | mRNA | 22225147 | 22227425 | 22225147 | ID=Msa1319290-mRNA-1;Parent=Msa1319290;Name=Msa1319290-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|1|1|5|0|294 |
| chr8_4 | exon | 22227406 | 22227425 | 22227406 | ID=Msa1319290-mRNA-1:exon:7887;Parent=Msa1319290-mRNA-1 |
| chr8_4 | exon | 22227051 | 22227297 | 22227051 | ID=Msa1319290-mRNA-1:exon:7886;Parent=Msa1319290-mRNA-1 |
| chr8_4 | exon | 22226918 | 22226974 | 22226918 | ID=Msa1319290-mRNA-1:exon:7885;Parent=Msa1319290-mRNA-1 |
| chr8_4 | exon | 22226005 | 22226184 | 22226005 | ID=Msa1319290-mRNA-1:exon:7884;Parent=Msa1319290-mRNA-1 |
| chr8_4 | exon | 22225147 | 22225527 | 22225147 | ID=Msa1319290-mRNA-1:exon:7883;Parent=Msa1319290-mRNA-1 |
| chr8_4 | CDS | 22227406 | 22227425 | 22227406 | ID=Msa1319290-mRNA-1:cds;Parent=Msa1319290-mRNA-1 |
| chr8_4 | CDS | 22227051 | 22227297 | 22227051 | ID=Msa1319290-mRNA-1:cds;Parent=Msa1319290-mRNA-1 |
| chr8_4 | CDS | 22226918 | 22226974 | 22226918 | ID=Msa1319290-mRNA-1:cds;Parent=Msa1319290-mRNA-1 |
| chr8_4 | CDS | 22226005 | 22226184 | 22226005 | ID=Msa1319290-mRNA-1:cds;Parent=Msa1319290-mRNA-1 |
| chr8_4 | CDS | 22225147 | 22225527 | 22225147 | ID=Msa1319290-mRNA-1:cds;Parent=Msa1319290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
