AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0587830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0587830 MtrunA17_Chr3g0138771 99.065 642 3 1 1 642 1 639 0.0 1319
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0587830 AT4G31120.1 72.006 643 170 4 1 642 1 634 0.0 983
Msa0587830 AT4G31120.2 72.513 593 153 4 1 592 1 584 0.0 910

Find 165 sgRNAs with CRISPR-Local

Find 698 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCATTTCAACTCATTCT+AGG 0.181109 4_2:+9735752 Msa0587830:three_prime_UTR
TCTGCTTCCCCGCCATTTGC+TGG 0.198952 4_2:+9726301 Msa0587830:CDS
CAAAACTTGAAGTAGATTTC+TGG 0.207173 4_2:+9735448 Msa0587830:CDS
TCTCTATCATTAACGGGTTT+TGG 0.232619 4_2:-9734290 None:intergenic
GCAGCCTTTGATGGATAATT+TGG 0.244046 4_2:+9730487 Msa0587830:intron
AACTATTCACCTGTATATTA+TGG 0.249921 4_2:-9728576 None:intergenic
CTTAGTGCAAAAGGATAGTT+TGG 0.258982 4_2:+9726276 Msa0587830:CDS
GGCTTCTCATCTCTCATTAC+AGG 0.262229 4_2:+9726939 Msa0587830:CDS
ATTCATTAGGACGGTGGTTT+GGG 0.263952 4_2:+9728349 Msa0587830:CDS
GCGCTGTTGCGGTCCTAAAA+AGG 0.282459 4_2:+9735470 Msa0587830:CDS
ACATCCCTTGCGTCTATATC+TGG 0.282913 4_2:+9730192 Msa0587830:CDS
TAGCACAAGAGGTTCCTTTC+GGG 0.284095 4_2:-9727490 None:intergenic
AATTAGCTCATGGATTGATT+TGG 0.287425 4_2:+9726855 Msa0587830:CDS
TCCACGACCATTAGTTAAAA+AGG 0.293178 4_2:-9728503 None:intergenic
ATAATTATATCTGGAAATTC+TGG 0.294246 4_2:+9728809 Msa0587830:CDS
TTTGCATCCACACTTGCTTT+AGG 0.298721 4_2:-9728836 None:intergenic
TTGCTTTACTTACTGCTCTT+TGG 0.301758 4_2:-9730908 None:intergenic
AGCGAATTGCTAGGTTCTTT+TGG 0.313912 4_2:+9732313 Msa0587830:CDS
GAACCTGGTTTCACGCAAAT+AGG 0.319887 4_2:-9735426 None:intergenic
AACAGTAATGACGGTCATAC+TGG 0.322928 4_2:+9735648 Msa0587830:CDS
TTTATGCCAGCTGGGATATA+GGG 0.329616 4_2:+9730345 Msa0587830:intron
TTGTAGGCTTCGGAAGAAAC+TGG 0.330200 4_2:+9731442 Msa0587830:intron
TCTTGTGCGGGCATCATTAC+AGG 0.333606 4_2:+9731325 Msa0587830:CDS
TCTCAAGTGACATGCGCTAT+TGG 0.336375 4_2:+9732176 Msa0587830:CDS
CTGTCTCCCGAGTGCCTTGA+TGG 0.346065 4_2:+9732346 Msa0587830:CDS
TGAAGGGTCACAACTGCATT+TGG 0.350137 4_2:-9731499 None:intergenic
AATTCATTAGGACGGTGGTT+TGG 0.352441 4_2:+9728348 Msa0587830:CDS
TCTATGTAGATAATTATATC+TGG 0.354765 4_2:+9728800 Msa0587830:intron
CAATACCTGAATGTATTTCA+TGG 0.357876 4_2:-9730543 None:intergenic
CTTTGATGCCACTCTTTACA+AGG 0.382748 4_2:+9734960 Msa0587830:CDS
ATTGCTTTCTCTATCATTAA+CGG 0.384043 4_2:-9734297 None:intergenic
TTAACAGATGCCTCTTCATC+AGG 0.392426 4_2:-9730945 None:intergenic
TTAGCACAAGAGGTTCCTTT+CGG 0.393377 4_2:-9727491 None:intergenic
TTGCACTAAGCTTGGCCTAT+AGG 0.394933 4_2:-9726263 None:intergenic
TCCATGGTCATAGGATTTGC+TGG 0.395666 4_2:+9734934 Msa0587830:intron
CTTTACAAGGATGTGCATCT+TGG 0.395973 4_2:+9734973 Msa0587830:CDS
TTTCATAATCGATCTGTTGC+GGG 0.396891 4_2:+9728863 Msa0587830:CDS
GTACTGATGGTTGTTGGAGC+AGG 0.399912 4_2:+9731293 Msa0587830:CDS
TTGTAATACAGTTGTGGCTC+AGG 0.405053 4_2:+9727654 Msa0587830:intron
TTCATGTATATCTTGAAAGT+TGG 0.405543 4_2:+9735815 Msa0587830:three_prime_UTR
GCCATTTGCTGGGTCAGACT+TGG 0.409569 4_2:+9726312 Msa0587830:CDS
CTGCTTCCCCGCCATTTGCT+GGG 0.411440 4_2:+9726302 Msa0587830:CDS
CAATACCAGCTGAACATGTT+TGG 0.413084 4_2:-9735018 None:intergenic
GTGTGTGAATCAAATCTTAC+AGG 0.420309 4_2:+9727523 Msa0587830:CDS
TTTACAAGGATGTGCATCTT+GGG 0.422998 4_2:+9734974 Msa0587830:CDS
TTGCTTTCTCTATCATTAAC+GGG 0.427268 4_2:-9734296 None:intergenic
CTGCCATCAGCAAATTCATT+AGG 0.429256 4_2:+9728336 Msa0587830:CDS
ATTGCGGACCCAGTGTCATT+TGG 0.437088 4_2:-9734350 None:intergenic
AGATGCCATGAAATACATTC+AGG 0.441145 4_2:+9730538 Msa0587830:CDS
CGTCTATATCTGGAATATGT+TGG 0.442276 4_2:+9730202 Msa0587830:CDS
TCATGTATATCTTGAAAGTT+GGG 0.447187 4_2:+9735816 Msa0587830:three_prime_UTR
ATGTTTGGTGTAGCCGTTGA+AGG 0.455647 4_2:-9735003 None:intergenic
TAGGCCAAGCTTAGTGCAAA+AGG 0.456688 4_2:+9726267 Msa0587830:CDS
CTCTTAGACAAGAATTAGCC+TGG 0.457643 4_2:+9726917 Msa0587830:CDS
TACTCACTGCTAGGTACTGA+TGG 0.459546 4_2:+9731280 Msa0587830:intron
CTGGGCTCCATCAAGGCACT+CGG 0.461871 4_2:-9732353 None:intergenic
CTAATGAATTTGCTGATGGC+AGG 0.461915 4_2:-9728335 None:intergenic
TGCTAGGTACTGATGGTTGT+TGG 0.463706 4_2:+9731287 Msa0587830:intron
GCCTTTGATGGATAATTTGG+AGG 0.470886 4_2:+9730490 Msa0587830:intron
ATCTTTCTCAAAAGTCTCAT+AGG 0.471837 4_2:-9730519 None:intergenic
CTCATGGATTGATTTGGACT+CGG 0.475293 4_2:+9726861 Msa0587830:CDS
AGATTGAAAGTAATGACATT+AGG 0.476386 4_2:-9723892 None:intergenic
GCCATCAGATGTTGATTACT+CGG 0.478184 4_2:+9728545 Msa0587830:CDS
TGTTCCCGATGATGACTCTA+TGG 0.481486 4_2:+9727688 Msa0587830:CDS
CAACTACATGACTACTCCAC+TGG 0.481772 4_2:-9726348 None:intergenic
ACCTCAAAACGTTCTTGCTC+AGG 0.486226 4_2:-9730253 None:intergenic
AGTTTCAGAATCTATTCTAA+AGG 0.490277 4_2:-9726893 None:intergenic
ATTACTTTCAATCTCTCCAC+TGG 0.491162 4_2:+9723901 Msa0587830:CDS
CAAGAGGTTCCTTTCGGGGA+AGG 0.501037 4_2:-9727485 None:intergenic
ATGGTTGTTGGAGCAGGGCG+TGG 0.504245 4_2:+9731299 Msa0587830:CDS
TAGAGCAGCTATAGTAAATA+CGG 0.504542 4_2:+9728380 Msa0587830:CDS
TATAACTTTGAAGCCGTCAC+TGG 0.508122 4_2:-9733932 None:intergenic
AAACGTTCTTGCTCAGGAAG+AGG 0.513726 4_2:-9730247 None:intergenic
TTTACAATACCAAATGACAC+TGG 0.514267 4_2:+9734341 Msa0587830:CDS
GTTGTGGCTCAGGATTCCCT+TGG 0.514831 4_2:+9727664 Msa0587830:intron
CGCAAATAGGTGTCCAGAGA+GGG 0.514960 4_2:-9735413 None:intergenic
ACATGACTACTCCACTGGGA+TGG 0.515754 4_2:-9726343 None:intergenic
AGTCTGACCCAGCAAATGGC+GGG 0.517555 4_2:-9726309 None:intergenic
TACTGATGGTTGTTGGAGCA+GGG 0.520282 4_2:+9731294 Msa0587830:CDS
AATCAACATCTGATGGCGCT+TGG 0.521495 4_2:-9728539 None:intergenic
CATGACTACTCCACTGGGAT+GGG 0.521981 4_2:-9726342 None:intergenic
AGGGCGTGGACCTCTTGTGC+GGG 0.524317 4_2:+9731313 Msa0587830:CDS
AAAACCTCTGGGCTCCATCA+AGG 0.524380 4_2:-9732360 None:intergenic
GGATGCAAGCTCTGCCACTT+TGG 0.524512 4_2:+9727709 Msa0587830:CDS
ACTGGGTCCGCAATGGTACA+TGG 0.531054 4_2:+9734359 Msa0587830:CDS
ACCAAGTCTGACCCAGCAAA+TGG 0.532105 4_2:-9726313 None:intergenic
TTCAGACGGATCCTTCCTAT+AGG 0.533536 4_2:+9726248 Msa0587830:intron
AAGGAATTTACATACGAAGA+TGG 0.536135 4_2:-9732406 None:intergenic
GTAGATTTCTGGCGCTGTTG+CGG 0.541333 4_2:+9735459 Msa0587830:CDS
AAATGAATTCCATGTTTCCC+AGG 0.548377 4_2:-9728093 None:intergenic
ACTTTGAAGCCGTCACTGGT+TGG 0.548962 4_2:-9733928 None:intergenic
TGGGCTCCATCAAGGCACTC+GGG 0.549652 4_2:-9732352 None:intergenic
ATTAGTTAAACTAGAGGGAT+GGG 0.554082 4_2:+9732135 Msa0587830:CDS
CTACACCAAACATGTTCAGC+TGG 0.554266 4_2:+9735013 Msa0587830:CDS
TGTAGGCTTCGGAAGAAACT+GGG 0.554700 4_2:+9731443 Msa0587830:intron
TCTTGGGATTGAACCTTCAA+CGG 0.556349 4_2:+9734990 Msa0587830:CDS
TATGACCGTCATTACTGTTG+TGG 0.556365 4_2:-9735644 None:intergenic
CATTAGTTAAACTAGAGGGA+TGG 0.557194 4_2:+9732134 Msa0587830:CDS
CAGGGCGTGGACCTCTTGTG+CGG 0.565584 4_2:+9731312 Msa0587830:CDS
TTAGTGCAAAAGGATAGTTT+GGG 0.565901 4_2:+9726277 Msa0587830:CDS
AGGTCGACACCTGGGAAACA+TGG 0.565908 4_2:+9728084 Msa0587830:intron
GCATCCATAGAGTCATCATC+GGG 0.567304 4_2:-9727692 None:intergenic
ACCGAGTAATCAACATCTGA+TGG 0.567542 4_2:-9728546 None:intergenic
GCCTCCAAATTATCCATCAA+AGG 0.569687 4_2:-9730491 None:intergenic
CCGTCATTACTGTTGTGGAT+TGG 0.570993 4_2:-9735639 None:intergenic
ACACCTATTTGCGTGAAACC+AGG 0.572870 4_2:+9735423 Msa0587830:CDS
AGACATGATTCCTGATGAAG+AGG 0.574116 4_2:+9730935 Msa0587830:CDS
ATTTAGGTTAGCGAATTGCT+AGG 0.574456 4_2:+9732304 Msa0587830:intron
TAATGAGAGATGAGAAGCCC+AGG 0.574465 4_2:-9726935 None:intergenic
TGTAATGATGCCCGCACAAG+AGG 0.574655 4_2:-9731323 None:intergenic
TGTCTGCTTCCTTCCCCGAA+AGG 0.574719 4_2:+9727476 Msa0587830:CDS
CAGTGGAGTAGTCATGTAGT+TGG 0.574836 4_2:+9726349 Msa0587830:CDS
AAGTTTCATCCAACCAGTGA+CGG 0.575615 4_2:+9733919 Msa0587830:CDS
TGCATCCATAGAGTCATCAT+CGG 0.576036 4_2:-9727693 None:intergenic
TAATGACGGTCATACTGGGT+AGG 0.576194 4_2:+9735653 Msa0587830:CDS
ACAGGACCTGAGTAATATGC+AGG 0.577703 4_2:+9727541 Msa0587830:CDS
CCGTGCATAATTAGCACAAG+AGG 0.578408 4_2:-9727501 None:intergenic
ACATCTGATGGCGCTTGGAG+AGG 0.580706 4_2:-9728534 None:intergenic
TTGTGGATTGGAGACGGAGA+GGG 0.586925 4_2:-9735627 None:intergenic
AGCATATTTACTCACCAAAG+TGG 0.589630 4_2:-9727723 None:intergenic
TCTTAGACAAGAATTAGCCT+GGG 0.590938 4_2:+9726918 Msa0587830:CDS
AATGACGGTCATACTGGGTA+GGG 0.591264 4_2:+9735654 Msa0587830:CDS
CGTCCTAATGAATTTGCTGA+TGG 0.591291 4_2:-9728339 None:intergenic
TGATGGCGCTTGGAGAGGCA+TGG 0.592687 4_2:-9728529 None:intergenic
GTCATCATCGGGAACAACCA+AGG 0.596085 4_2:-9727681 None:intergenic
ACTAAGCTTGGCCTATAGGA+AGG 0.596176 4_2:-9726259 None:intergenic
TTCATTAGGACGGTGGTTTG+GGG 0.596223 4_2:+9728350 Msa0587830:CDS
GAGTTGAAATGAAGACAGAC+TGG 0.596865 4_2:-9735744 None:intergenic
TCATCAGCGAAAATGCCTCT+AGG 0.597923 4_2:+9723802 Msa0587830:exon
AGATCCACAACTAACATGAA+GGG 0.598190 4_2:-9731515 None:intergenic
TCATCATCGGGAACAACCAA+GGG 0.600088 4_2:-9727680 None:intergenic
AAATGACACTGGGTCCGCAA+TGG 0.601306 4_2:+9734352 Msa0587830:CDS
TAATTAGTGACGAGTCGAGT+AGG 0.602690 4_2:+9723689 None:intergenic
TAATGAATTTGCTGATGGCA+GGG 0.603624 4_2:-9728334 None:intergenic
CAGCAAATTCATTAGGACGG+TGG 0.606528 4_2:+9728343 Msa0587830:CDS
TGGTCATCCTAAAGCAAGTG+TGG 0.609783 4_2:+9728829 Msa0587830:CDS
ATGCACATCCTTGTAAAGAG+TGG 0.614069 4_2:-9734968 None:intergenic
ACAGTAATGACGGTCATACT+GGG 0.614113 4_2:+9735649 Msa0587830:CDS
ATAACACCTGCATATTACTC+AGG 0.614670 4_2:-9727547 None:intergenic
AGCACAAGAGGTTCCTTTCG+GGG 0.615936 4_2:-9727489 None:intergenic
TTACTGTTGTGGATTGGAGA+CGG 0.619440 4_2:-9735633 None:intergenic
AAGTCTGACCCAGCAAATGG+CGG 0.620783 4_2:-9726310 None:intergenic
GTCTGACCCAGCAAATGGCG+GGG 0.620822 4_2:-9726308 None:intergenic
TTACAATACCAAATGACACT+GGG 0.624807 4_2:+9734342 Msa0587830:CDS
GATGGTATTGAAATTCCACC+CGG 0.625148 4_2:-9732388 None:intergenic
AACTACATGACTACTCCACT+GGG 0.629688 4_2:-9726347 None:intergenic
TATTCCAGATATAGACGCAA+GGG 0.630701 4_2:-9730196 None:intergenic
ATATTCCAGATATAGACGCA+AGG 0.632148 4_2:-9730197 None:intergenic
CCTCTTGTGCTAATTATGCA+CGG 0.633016 4_2:+9727501 Msa0587830:CDS
TCACCTCCTCTGTCTCCTAG+AGG 0.633120 4_2:-9723817 None:intergenic
AAGAAACGCACGGATTGACA+TGG 0.638531 4_2:-9734118 None:intergenic
CCAATCCACAACAGTAATGA+CGG 0.639087 4_2:+9735639 Msa0587830:CDS
CAGGCATTAGTTAAACTAGA+GGG 0.644902 4_2:+9732130 Msa0587830:intron
ACAGGCATTAGTTAAACTAG+AGG 0.649736 4_2:+9732129 Msa0587830:intron
CATCAGCAAATTCATTAGGA+CGG 0.649962 4_2:+9728340 Msa0587830:CDS
TGAAACAGGTTTGGTATGAG+TGG 0.650526 4_2:+9735592 Msa0587830:intron
ACGCAAATAGGTGTCCAGAG+AGG 0.665627 4_2:-9735414 None:intergenic
AGTTAAACTAGAGGGATGGG+AGG 0.670652 4_2:+9732138 Msa0587830:CDS
AAAATGCCTCTAGGAGACAG+AGG 0.673445 4_2:+9723811 Msa0587830:exon
GTTGTGGATTGGAGACGGAG+AGG 0.675226 4_2:-9735628 None:intergenic
TGGTCTTAAGCCCATCCCAG+TGG 0.683451 4_2:+9726332 Msa0587830:CDS
AGTGCCTTGATGGAGCCCAG+AGG 0.714390 4_2:+9732356 Msa0587830:CDS
ATGCCTCTAGGAGACAGAGG+AGG 0.733973 4_2:+9723814 Msa0587830:CDS
GTACTTACCATGTACCATTG+CGG 0.745037 4_2:-9734366 None:intergenic
AGGCTTCGGAAGAAACTGGG+CGG 0.765701 4_2:+9731446 Msa0587830:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTTTTTTTAT+GGG - chr4_2:9734719-9734738 None:intergenic 0.0%
!!! TTTTTATTTTTTTTTTTTTA+TGG - chr4_2:9734720-9734739 None:intergenic 0.0%
!! TTAAATTAAATGACAAAAAA+TGG - chr4_2:9723770-9723789 None:intergenic 10.0%
!! ATTGTATAATTTATTGTTTA+TGG + chr4_2:9724463-9724482 Msa0587830:intron 10.0%
!!! ATTTTTTTTTTGCAAATTAT+TGG + chr4_2:9726136-9726155 Msa0587830:intron 10.0%
!!! CATTAAAAAAAAATTAGTTT+TGG - chr4_2:9726562-9726581 None:intergenic 10.0%
!!! AAACTAATTTTTTTTTAATG+TGG + chr4_2:9726562-9726581 Msa0587830:intron 10.0%
!!! TAGAAATTTTTAAGATAAAA+AGG - chr4_2:9726656-9726675 None:intergenic 10.0%
!!! ATTAATTTTTTTTACTCTTT+CGG + chr4_2:9726744-9726763 Msa0587830:intron 10.0%
!! TATTTGTAGTTATAATAAAT+GGG - chr4_2:9727925-9727944 None:intergenic 10.0%
!! ATATTTGTAGTTATAATAAA+TGG - chr4_2:9727926-9727945 None:intergenic 10.0%
!!! TTAATAATTTTGATAAATTG+AGG + chr4_2:9729513-9729532 Msa0587830:intron 10.0%
!!! TAATAATTTTGATAAATTGA+GGG + chr4_2:9729514-9729533 Msa0587830:intron 10.0%
!! TTTATAATTTCCAAAAAAAT+AGG + chr4_2:9729542-9729561 Msa0587830:intron 10.0%
!! AAACAAACTAAAATATAAAA+CGG - chr4_2:9730740-9730759 None:intergenic 10.0%
!!! TTTTATATTTTAGTTTGTTT+GGG + chr4_2:9730740-9730759 Msa0587830:intron 10.0%
!! TTTGATATAAAAAAATAGAA+TGG - chr4_2:9731071-9731090 None:intergenic 10.0%
!! AAAATAGCAATTAAAAATAA+GGG - chr4_2:9731212-9731231 None:intergenic 10.0%
!! AAAAATAGCAATTAAAAATA+AGG - chr4_2:9731213-9731232 None:intergenic 10.0%
!!! ATATTTTATTAATGAGAAAA+TGG - chr4_2:9734529-9734548 None:intergenic 10.0%
!!! ATTTTCTCATTAATAAAATA+TGG + chr4_2:9734528-9734547 Msa0587830:intron 10.0%
!!! TTTTCTCATTAATAAAATAT+GGG + chr4_2:9734529-9734548 Msa0587830:intron 10.0%
!!! TTATTTTTTAATTCAAGTTT+TGG + chr4_2:9735075-9735094 Msa0587830:intron 10.0%
!!! ATATATCATGTTCATTTTAA+CGG + chr4_2:9725346-9725365 Msa0587830:intron 15.0%
!!! ATATTTTTGTTGCAAATTAT+TGG + chr4_2:9726085-9726104 Msa0587830:intron 15.0%
!!! GTTACATTTATAATGATTTT+TGG + chr4_2:9727376-9727395 Msa0587830:intron 15.0%
!! ACAGTATATTAAACAAAATT+AGG - chr4_2:9727451-9727470 None:intergenic 15.0%
!!! AATTTTGTTTAATATACTGT+AGG + chr4_2:9727451-9727470 Msa0587830:intron 15.0%
!! AAATCATACAAAAATATCAA+AGG - chr4_2:9728224-9728243 None:intergenic 15.0%
!!! TAAAGTTTAAAGGTTTTAAT+TGG + chr4_2:9728468-9728487 Msa0587830:intron 15.0%
!! ATCATAATTCATGAAATTAA+GGG + chr4_2:9728931-9728950 Msa0587830:intron 15.0%
!!! TCTATTTTCAGAAAATATAA+AGG - chr4_2:9729037-9729056 None:intergenic 15.0%
!!! ATGAACATATATTTTTGAAA+CGG + chr4_2:9729223-9729242 Msa0587830:intron 15.0%
!!! CTAATTTCAATTTTCAAATT+TGG - chr4_2:9729468-9729487 None:intergenic 15.0%
!! AATTTGAAAATTGAAATTAG+TGG + chr4_2:9729468-9729487 Msa0587830:intron 15.0%
!!! AATAATTTTGATAAATTGAG+GGG + chr4_2:9729515-9729534 Msa0587830:intron 15.0%
!!! ATTTGCAATTTTTTGAAAAT+AGG + chr4_2:9729570-9729589 Msa0587830:intron 15.0%
!!! TATATTCAAATTTTGCATTT+TGG - chr4_2:9729597-9729616 None:intergenic 15.0%
!! TGAATATATTTATAAGAATG+TGG + chr4_2:9729609-9729628 Msa0587830:intron 15.0%
!!! ATGAACATATAATTTTGAAA+CGG + chr4_2:9729861-9729880 Msa0587830:intron 15.0%
!! ATATTTACAAACAAATTACA+AGG - chr4_2:9729939-9729958 None:intergenic 15.0%
!!! GTTTTATATTTTAGTTTGTT+TGG + chr4_2:9730739-9730758 Msa0587830:intron 15.0%
!!! TTTTTTTGTTACTTATATCT+AGG + chr4_2:9730824-9730843 Msa0587830:intron 15.0%
!! AAATAGCAATTAAAAATAAG+GGG - chr4_2:9731211-9731230 None:intergenic 15.0%
!! AAATAAAAATGCACAAAAAT+CGG - chr4_2:9731424-9731443 None:intergenic 15.0%
!! TAAAAATATTGATGAAGTTT+AGG - chr4_2:9731817-9731836 None:intergenic 15.0%
!! AAAATCAAACAATTAACAAA+AGG - chr4_2:9732245-9732264 None:intergenic 15.0%
!!! TTTTTTCTTTTTTTGATAGA+GGG + chr4_2:9732466-9732485 Msa0587830:intron 15.0%
!!! TTTTTTCAAATAAATTTTGG+TGG - chr4_2:9732496-9732515 None:intergenic 15.0%
!!! AATTTGTTTGAATAAGTTTT+TGG - chr4_2:9734643-9734662 None:intergenic 15.0%
!! ATAATTAAATTACATGGAAA+TGG + chr4_2:9734762-9734781 Msa0587830:intron 15.0%
!!! TTTTGTCATTTAATTTAACG+CGG + chr4_2:9723772-9723791 Msa0587830:five_prime_UTR 20.0%
!!! ATCTATAATGTTCTAAGATT+TGG + chr4_2:9724736-9724755 Msa0587830:intron 20.0%
!! ATACACGCTATATTAATAAT+TGG + chr4_2:9724904-9724923 Msa0587830:intron 20.0%
!! AATAATGAACAATAAACAGT+CGG + chr4_2:9725305-9725324 Msa0587830:intron 20.0%
!!! TATATCATGTTCATTTTAAC+GGG + chr4_2:9725347-9725366 Msa0587830:intron 20.0%
!! AATCATATATGAAATGTAAC+TGG - chr4_2:9725820-9725839 None:intergenic 20.0%
!! AGTTACATTTCATATATGAT+TGG + chr4_2:9725819-9725838 Msa0587830:intron 20.0%
!! TACATTATTGAAACAATGTA+TGG + chr4_2:9725928-9725947 Msa0587830:intron 20.0%
!!! AATTTATTGCATTTTTACTC+AGG + chr4_2:9726829-9726848 Msa0587830:intron 20.0%
!!! TTTATTTTGTAATACAGTTG+TGG + chr4_2:9727648-9727667 Msa0587830:intron 20.0%
!! AAAGAAGAAAAAAAAAGCAA+AGG - chr4_2:9727851-9727870 None:intergenic 20.0%
!! AGAATTACAATGAAAACAAA+GGG - chr4_2:9727950-9727969 None:intergenic 20.0%
!! AAGAATTACAATGAAAACAA+AGG - chr4_2:9727951-9727970 None:intergenic 20.0%
!!! TATAAGGAATTTTAAATGTC+AGG + chr4_2:9728423-9728442 Msa0587830:intron 20.0%
!!! GATTGTTATCTAAAGTTTAA+AGG + chr4_2:9728458-9728477 Msa0587830:intron 20.0%
!!! AAAGGTTTTAATTGGAATTT+TGG + chr4_2:9728476-9728495 Msa0587830:intron 20.0%
!!! GTTTTTTAACCATAATATAC+AGG + chr4_2:9728567-9728586 Msa0587830:CDS 20.0%
!! TCTATGTAGATAATTATATC+TGG + chr4_2:9728800-9728819 Msa0587830:intron 20.0%
!! ATAATTATATCTGGAAATTC+TGG + chr4_2:9728809-9728828 Msa0587830:CDS 20.0%
!! GATCATAATTCATGAAATTA+AGG + chr4_2:9728930-9728949 Msa0587830:intron 20.0%
!!! CATTTTAGATGTTTTGAAAA+TGG + chr4_2:9729064-9729083 Msa0587830:intron 20.0%
!! TTAAATTGTTAACAAGTAGA+TGG - chr4_2:9729202-9729221 None:intergenic 20.0%
!!! TGAACATATATTTTTGAAAC+GGG + chr4_2:9729224-9729243 Msa0587830:intron 20.0%
!!! ATATTTTCTGAAAGTAAACA+CGG + chr4_2:9729256-9729275 Msa0587830:intron 20.0%
!! TTTAAAGAATTGAGAATTCT+TGG + chr4_2:9729324-9729343 Msa0587830:intron 20.0%
!! CATTTCTAAATATTCTTGTT+TGG + chr4_2:9729376-9729395 Msa0587830:intron 20.0%
!!! TAATATGGAGAATTTTCAAA+AGG - chr4_2:9729715-9729734 None:intergenic 20.0%
!! TTTAATTGAATTCCATTGTT+TGG - chr4_2:9729742-9729761 None:intergenic 20.0%
!! TAAAATTGTTAACAAGTAGA+TGG - chr4_2:9729840-9729859 None:intergenic 20.0%
!!! TGAACATATAATTTTGAAAC+GGG + chr4_2:9729862-9729881 Msa0587830:intron 20.0%
!! TATTTATATGCACTACTATT+TGG + chr4_2:9729964-9729983 Msa0587830:intron 20.0%
!! ATGTCTATATTACAAACATA+TGG - chr4_2:9730289-9730308 None:intergenic 20.0%
!! AAAAAAATGCTTACTTGTAA+AGG - chr4_2:9730385-9730404 None:intergenic 20.0%
!! GAGAAAACATAAACATAAAT+TGG - chr4_2:9730602-9730621 None:intergenic 20.0%
!!! ATCATAAATCAAAGTATTGT+CGG + chr4_2:9730800-9730819 Msa0587830:intron 20.0%
!!! TTAAATGCATTTTCAGTATT+AGG + chr4_2:9731002-9731021 Msa0587830:intron 20.0%
!!! ATTTTACAAACTAATAAGAG+TGG - chr4_2:9731100-9731119 None:intergenic 20.0%
!!! TTTTGTGCATTTTTATTTGT+AGG + chr4_2:9731426-9731445 Msa0587830:intron 20.0%
!! ATAAACAAATAACGCTATAT+AGG - chr4_2:9731573-9731592 None:intergenic 20.0%
!! TATATAGCGTTATTTGTTTA+TGG + chr4_2:9731572-9731591 Msa0587830:intron 20.0%
!!! AAATGTAGAAGTTTTTTTCT+TGG - chr4_2:9731715-9731734 None:intergenic 20.0%
!! AAGAAAAAAACTTCTACATT+TGG + chr4_2:9731714-9731733 Msa0587830:intron 20.0%
!!! TATTTAGTTCCTTTATTGTT+CGG + chr4_2:9731933-9731952 Msa0587830:intron 20.0%
!!! ATTTATGTTGGTTTGAATTT+AGG + chr4_2:9732288-9732307 Msa0587830:intron 20.0%
!!! CTTTTTTCTTTTTTTGATAG+AGG + chr4_2:9732465-9732484 Msa0587830:intron 20.0%
!!! TTTTTTTTGCAAAATCGTTA+AGG + chr4_2:9733369-9733388 Msa0587830:intron 20.0%
!!! TTTTTTTGCAAAATCGTTAA+GGG + chr4_2:9733370-9733389 Msa0587830:intron 20.0%
!! AGGGATGTTAAATTATTAAT+CGG + chr4_2:9733389-9733408 Msa0587830:intron 20.0%
!!! GTATATGCAAAATCTTATTT+TGG - chr4_2:9733648-9733667 None:intergenic 20.0%
!! AAATAAAAAATAAACTGCAC+AGG - chr4_2:9734144-9734163 None:intergenic 20.0%
!!! TTAATTTCTTTTCTTTCTGT+TGG + chr4_2:9734233-9734252 Msa0587830:intron 20.0%
!! TAAAAGTAGAATCTTTATCT+TGG + chr4_2:9734591-9734610 Msa0587830:intron 20.0%
!! CATAAAATATGAGTTATACT+TGG - chr4_2:9735356-9735375 None:intergenic 20.0%
!! AAGAAATCAATGTTACTAAA+AGG - chr4_2:9735563-9735582 None:intergenic 20.0%
! AGATTGAAAGTAATGACATT+AGG - chr4_2:9723895-9723914 None:intergenic 25.0%
! GTGTTGTATTGTATAGTTTA+TGG + chr4_2:9723978-9723997 Msa0587830:intron 25.0%
!!! TAGAATGTTCTAAGATCTAT+TGG + chr4_2:9724262-9724281 Msa0587830:intron 25.0%
! CTAATGTCTTGTATGAATAA+TGG + chr4_2:9724339-9724358 Msa0587830:intron 25.0%
! TTACTGTACTGTATAGTTTA+TGG + chr4_2:9724936-9724955 Msa0587830:intron 25.0%
! TCATATGATAAAGTGATGAT+TGG + chr4_2:9725373-9725392 Msa0587830:intron 25.0%
! CTATTGTACTAGATAGTTTA+TGG + chr4_2:9725411-9725430 Msa0587830:intron 25.0%
!! CAGTTTTACATATAAAGTAC+AGG - chr4_2:9725873-9725892 None:intergenic 25.0%
! TATGTAAAACTGACTAAATG+TGG + chr4_2:9725881-9725900 Msa0587830:intron 25.0%
! CAAAATCATGTAAGCTAAAT+GGG - chr4_2:9726220-9726239 None:intergenic 25.0%
! ACAAAATCATGTAAGCTAAA+TGG - chr4_2:9726221-9726240 None:intergenic 25.0%
!! ATTTTGTGTTACAATTCAGA+CGG + chr4_2:9726234-9726253 Msa0587830:intron 25.0%
! ATGCTAATAGTAAGAATGAT+AGG - chr4_2:9726384-9726403 None:intergenic 25.0%
! TTGATGAAGGAGAATATAAA+AGG - chr4_2:9726464-9726483 None:intergenic 25.0%
! ATTCTATCATGAATTCTGTT+AGG + chr4_2:9726508-9726527 Msa0587830:intron 25.0%
! TTTCTTTCTAAATTGCTTCA+TGG + chr4_2:9726535-9726554 Msa0587830:intron 25.0%
!!! TGGTTATTTTTTACGTTAGT+TGG + chr4_2:9726582-9726601 Msa0587830:intron 25.0%
! TTGCTAAAATTGTATGAGTT+TGG + chr4_2:9726626-9726645 Msa0587830:intron 25.0%
! AGTTTCAGAATCTATTCTAA+AGG - chr4_2:9726896-9726915 None:intergenic 25.0%
!!! AGTAATCATTATTTTGCTTG+AGG + chr4_2:9727035-9727054 Msa0587830:intron 25.0%
!!! TCCTGACTTTTTTTTTTCAA+TGG - chr4_2:9727078-9727097 None:intergenic 25.0%
! ATGAACATAAGAATGAAATG+AGG - chr4_2:9727622-9727641 None:intergenic 25.0%
! CTTCTTTCAAATGTAAACTT+AGG + chr4_2:9727864-9727883 Msa0587830:intron 25.0%
!!! TGTAAACTTAGGTCTTATTT+TGG + chr4_2:9727875-9727894 Msa0587830:intron 25.0%
!!! TTGTTTTCCAATAGTTTGTA+TGG + chr4_2:9727969-9727988 Msa0587830:intron 25.0%
!!! TGTTTTCCAATAGTTTGTAT+GGG + chr4_2:9727970-9727989 Msa0587830:intron 25.0%
! ATGGGAGAAAACAAAAATTT+AGG + chr4_2:9727988-9728007 Msa0587830:intron 25.0%
!!! ATGCTTTCTGTGTTTTTTTA+AGG + chr4_2:9728042-9728061 Msa0587830:intron 25.0%
!!! TGCTTTCTGTGTTTTTTTAA+GGG + chr4_2:9728043-9728062 Msa0587830:intron 25.0%
!! GGATTTCAATCTTGATTTTT+AGG + chr4_2:9728064-9728083 Msa0587830:intron 25.0%
! AGCATTTAAAAAGAAGTTCA+GGG - chr4_2:9728251-9728270 None:intergenic 25.0%
! TTATTGTAATCTCGTTCATT+AGG + chr4_2:9728307-9728326 Msa0587830:intron 25.0%
! AACTATTCACCTGTATATTA+TGG - chr4_2:9728579-9728598 None:intergenic 25.0%
!! GAATAGTTCTTTGAATTTTG+AGG + chr4_2:9728591-9728610 Msa0587830:intron 25.0%
! ATAATGAAATACAGAACTGT+AGG - chr4_2:9728678-9728697 None:intergenic 25.0%
!!! AAGTTACTGTTATTGATTCA+TGG + chr4_2:9728887-9728906 Msa0587830:intron 25.0%
!!! AGTTACTGTTATTGATTCAT+GGG + chr4_2:9728888-9728907 Msa0587830:intron 25.0%
! TCAGAAAATATAAAGGATAC+TGG - chr4_2:9729030-9729049 None:intergenic 25.0%
!! TCAAAACATCTAAAATGCTA+GGG - chr4_2:9729061-9729080 None:intergenic 25.0%
!! TTCAAAACATCTAAAATGCT+AGG - chr4_2:9729062-9729081 None:intergenic 25.0%
!! TCTAAATATTCTTGTTTGGA+TGG + chr4_2:9729380-9729399 Msa0587830:intron 25.0%
!!! CAAATTGACTCCTATTTTTT+TGG - chr4_2:9729555-9729574 None:intergenic 25.0%
! CCATTGTTTGGATAATAATA+TGG - chr4_2:9729730-9729749 None:intergenic 25.0%
! CCATATTATTATCCAAACAA+TGG + chr4_2:9729727-9729746 Msa0587830:intron 25.0%
!! AAGGAAGAATAAGACATTTT+AGG - chr4_2:9729920-9729939 None:intergenic 25.0%
!! TGTAAAAAAGAGACATTTTG+CGG - chr4_2:9730002-9730021 None:intergenic 25.0%
!!! TACAAGTAAGCATTTTTTTC+AGG + chr4_2:9730386-9730405 Msa0587830:intron 25.0%
! GCTACTCTCTAATAATTTAT+TGG + chr4_2:9730408-9730427 Msa0587830:intron 25.0%
!!! TCATAAATCAAAGTATTGTC+GGG + chr4_2:9730801-9730820 Msa0587830:intron 25.0%
! ACGAGAAAAAAATCTTACAA+TGG - chr4_2:9730973-9730992 None:intergenic 25.0%
!! TTTTCAGTATTAGGAGAAAT+TGG + chr4_2:9731011-9731030 Msa0587830:intron 25.0%
!! TATTTCAATACATTGACTGA+GGG - chr4_2:9731134-9731153 None:intergenic 25.0%
! GTCATATATTGCAAACAATA+AGG - chr4_2:9731363-9731382 None:intergenic 25.0%
! TATATAGGAACAGAATTTCA+TGG - chr4_2:9731558-9731577 None:intergenic 25.0%
! CTACTTCAGTAATAAACAAA+GGG - chr4_2:9731778-9731797 None:intergenic 25.0%
! TCTACTTCAGTAATAAACAA+AGG - chr4_2:9731779-9731798 None:intergenic 25.0%
! CTATATCTTACTGAAACTAA+CGG - chr4_2:9732038-9732057 None:intergenic 25.0%
!!! ATTTTTGTTGTTTATGCTCT+AGG + chr4_2:9732260-9732279 Msa0587830:intron 25.0%
!!! TTTTTGTTGTTTATGCTCTA+GGG + chr4_2:9732261-9732280 Msa0587830:intron 25.0%
! AAAAGAAAAACCCAAAACAT+GGG - chr4_2:9732450-9732469 None:intergenic 25.0%
! AAAAAGAAAAACCCAAAACA+TGG - chr4_2:9732451-9732470 None:intergenic 25.0%
! TTAACATACCCAATATAACT+TGG + chr4_2:9732561-9732580 Msa0587830:intron 25.0%
! ATTAGTAGCCAAGTTATATT+GGG - chr4_2:9732572-9732591 None:intergenic 25.0%
! AATTAGTAGCCAAGTTATAT+TGG - chr4_2:9732573-9732592 None:intergenic 25.0%
! TAAATAAGCTCATAACGATA+TGG - chr4_2:9733240-9733259 None:intergenic 25.0%
! GGGATGTTAAATTATTAATC+GGG + chr4_2:9733390-9733409 Msa0587830:intron 25.0%
! CATATACTCATAATTGTTGA+AGG + chr4_2:9733661-9733680 Msa0587830:intron 25.0%
! CATAAAGATAAATAGACATG+TGG - chr4_2:9733877-9733896 None:intergenic 25.0%
! TTAATCAATATACTCACTTC+TGG + chr4_2:9734009-9734028 Msa0587830:intron 25.0%
! ATTGCTTTCTCTATCATTAA+CGG - chr4_2:9734300-9734319 None:intergenic 25.0%
! ACTAGTTAAGGATTCAAAAA+AGG - chr4_2:9734676-9734695 None:intergenic 25.0%
! TTAAACATTGAGTGTCTATT+TGG - chr4_2:9734828-9734847 None:intergenic 25.0%
! AGTACAAAGATATACTTACT+TGG + chr4_2:9735174-9735193 Msa0587830:intron 25.0%
! GTACAAAGATATACTTACTT+GGG + chr4_2:9735175-9735194 Msa0587830:intron 25.0%
!! ACCACAAATCAATCTTATTT+AGG - chr4_2:9735329-9735348 None:intergenic 25.0%
! AATAATATACAACAAGACGA+AGG - chr4_2:9735539-9735558 None:intergenic 25.0%
! TTCATGTATATCTTGAAAGT+TGG + chr4_2:9735815-9735834 Msa0587830:three_prime_UTR 25.0%
! TCATGTATATCTTGAAAGTT+GGG + chr4_2:9735816-9735835 Msa0587830:three_prime_UTR 25.0%
!!! ATTGCTCAATGTTTTTGGTA+GGG - chr4_2:9723743-9723762 None:intergenic 30.0%
!!! AATTGCTCAATGTTTTTGGT+AGG - chr4_2:9723744-9723763 None:intergenic 30.0%
! AACGAAATCAAATTTTCCAG+TGG - chr4_2:9723920-9723939 None:intergenic 30.0%
CATCAAACAGTTATCGATAT+AGG - chr4_2:9724074-9724093 None:intergenic 30.0%
CATTGAACAGTTAACGATTT+AGG - chr4_2:9724557-9724576 None:intergenic 30.0%
AAGACATTTGCAAATTAACG+AGG - chr4_2:9724806-9724825 None:intergenic 30.0%
AGTGTGCGATATCATAAAAA+GGG + chr4_2:9724862-9724881 Msa0587830:intron 30.0%
TCATTATTCACACAAGACAA+TGG - chr4_2:9725293-9725312 None:intergenic 30.0%
TCATCAAACAGTTTCAATCT+AGG - chr4_2:9725503-9725522 None:intergenic 30.0%
ATGAAATGTAACTGGCTAAT+TGG - chr4_2:9725812-9725831 None:intergenic 30.0%
! TTCATATATGATTGGTCAGT+AGG + chr4_2:9725827-9725846 Msa0587830:intron 30.0%
GTGATATTCTATCATCCAAA+TGG + chr4_2:9726005-9726024 Msa0587830:intron 30.0%
GTAAGAAATGCATATGTTGA+AGG - chr4_2:9726195-9726214 None:intergenic 30.0%
TTAGTGCAAAAGGATAGTTT+GGG + chr4_2:9726277-9726296 Msa0587830:CDS 30.0%
CAAGAACACAAAATTGATGA+AGG - chr4_2:9726477-9726496 None:intergenic 30.0%
! CTTCATCAATTTTGTGTTCT+TGG + chr4_2:9726475-9726494 Msa0587830:intron 30.0%
GTTAGTTGGTCATGATTATA+TGG + chr4_2:9726596-9726615 Msa0587830:intron 30.0%
AATGCACAGAAAAGAAAAGT+AGG - chr4_2:9726727-9726746 None:intergenic 30.0%
! AATTAGCTCATGGATTGATT+TGG + chr4_2:9726855-9726874 Msa0587830:CDS 30.0%
GCCATTGAAAAAAAAAAGTC+AGG + chr4_2:9727074-9727093 Msa0587830:intron 30.0%
!!! CATAAAGGACTTCGTTTTTT+AGG - chr4_2:9727228-9727247 None:intergenic 30.0%
! GGAAATATAGTGGAGATAAT+AGG - chr4_2:9727341-9727360 None:intergenic 30.0%
AAATGTAACGTTGTAGCATA+TGG - chr4_2:9727365-9727384 None:intergenic 30.0%
! TTTTCTCCCATACAAACTAT+TGG - chr4_2:9727979-9727998 None:intergenic 30.0%
ATTGCAGACAGTAAAGAATT+AGG + chr4_2:9728014-9728033 Msa0587830:intron 30.0%
TTGCAGACAGTAAAGAATTA+GGG + chr4_2:9728015-9728034 Msa0587830:intron 30.0%
TCAAAGGTCTTTGTATACAA+TGG - chr4_2:9728208-9728227 None:intergenic 30.0%
GAGCATTTAAAAAGAAGTTC+AGG - chr4_2:9728252-9728271 None:intergenic 30.0%
TAGAGCAGCTATAGTAAATA+CGG + chr4_2:9728380-9728399 Msa0587830:CDS 30.0%
CTATAGTAAATACGGATGTA+AGG + chr4_2:9728388-9728407 Msa0587830:intron 30.0%
! TAGCATTGTTTTCCTTTGAA+AGG + chr4_2:9728757-9728776 Msa0587830:intron 30.0%
! TTTTCATAATCGATCTGTTG+CGG + chr4_2:9728862-9728881 Msa0587830:CDS 30.0%
AATGAAAACGTGAAGTAAAC+AGG - chr4_2:9728957-9728976 None:intergenic 30.0%
AATATAAAGGATACTGGTGA+GGG - chr4_2:9729024-9729043 None:intergenic 30.0%
AAATATAAAGGATACTGGTG+AGG - chr4_2:9729025-9729044 None:intergenic 30.0%
TGTCAAAAATGCATTCTTTG+CGG + chr4_2:9729128-9729147 Msa0587830:intron 30.0%
! ATGGAGAATTTTCAAAAGGA+TGG - chr4_2:9729711-9729730 None:intergenic 30.0%
!! GAGGTAATGTAATGTTTTGA+GGG - chr4_2:9729777-9729796 None:intergenic 30.0%
! TGAGGTAATGTAATGTTTTG+AGG - chr4_2:9729778-9729797 None:intergenic 30.0%
!! ACATTTTCTGAAAGTAAGCA+TGG + chr4_2:9729894-9729913 Msa0587830:intron 30.0%
GCTTTGTATATTGTATGTGA+TGG + chr4_2:9730085-9730104 Msa0587830:intron 30.0%
! TCACTATAAACAGAAGGTTT+TGG - chr4_2:9730145-9730164 None:intergenic 30.0%
ATCTTTCTCAAAAGTCTCAT+AGG - chr4_2:9730522-9730541 None:intergenic 30.0%
CAATACCTGAATGTATTTCA+TGG - chr4_2:9730546-9730565 None:intergenic 30.0%
AAATTGGATGAGTGAATTTG+AGG - chr4_2:9730586-9730605 None:intergenic 30.0%
! ATTTCAATACATTGACTGAG+GGG - chr4_2:9731133-9731152 None:intergenic 30.0%
! GTATTTCAATACATTGACTG+AGG - chr4_2:9731135-9731154 None:intergenic 30.0%
! TGTTATTTAAGAACACCTCA+AGG + chr4_2:9731170-9731189 Msa0587830:intron 30.0%
GTTATTTAAGAACACCTCAA+GGG + chr4_2:9731171-9731190 Msa0587830:intron 30.0%
!!! AATTGTTTTTACTCACTGCT+AGG + chr4_2:9731271-9731290 Msa0587830:intron 30.0%
TGACTCTGTTATATGTAGAT+TGG + chr4_2:9731379-9731398 Msa0587830:intron 30.0%
!! GCATTTTTATTTGTAGGCTT+CGG + chr4_2:9731432-9731451 Msa0587830:intron 30.0%
TTTCTTAACTTATGCCTCAA+GGG + chr4_2:9731737-9731756 Msa0587830:intron 30.0%
TTACCTACCATGATTACATA+CGG - chr4_2:9731907-9731926 None:intergenic 30.0%
TTACAATGACCGAACAATAA+AGG - chr4_2:9731945-9731964 None:intergenic 30.0%
GAAGGATGATCTCAAATAAT+GGG - chr4_2:9732079-9732098 None:intergenic 30.0%
ATAACTCGTGTCTAAATTGA+TGG - chr4_2:9732101-9732120 None:intergenic 30.0%
TTTAGACACGAGTTATTTGT+TGG + chr4_2:9732105-9732124 Msa0587830:intron 30.0%
ATTAGTTAAACTAGAGGGAT+GGG + chr4_2:9732135-9732154 Msa0587830:CDS 30.0%
! ACAATTAACAAAAGGAGCAT+AGG - chr4_2:9732237-9732256 None:intergenic 30.0%
AAGGAATTTACATACGAAGA+TGG - chr4_2:9732409-9732428 None:intergenic 30.0%
!! ATTCCTTTTATTTCATCCAC+TGG + chr4_2:9732422-9732441 Msa0587830:intron 30.0%
ATAAAAAATAGAACTCGCTG+AGG + chr4_2:9732808-9732827 Msa0587830:intron 30.0%
GAAGTACAAAAACTTCAAAG+TGG - chr4_2:9732906-9732925 None:intergenic 30.0%
TCTATGATTGTGTATGATAG+TGG + chr4_2:9733012-9733031 Msa0587830:intron 30.0%
TCAAGTAGAGCAAAATATCT+AGG - chr4_2:9733110-9733129 None:intergenic 30.0%
TACCATTAGCATCATCATAT+AGG + chr4_2:9733258-9733277 Msa0587830:intron 30.0%
! TTCCTATATGATGATGCTAA+TGG - chr4_2:9733263-9733282 None:intergenic 30.0%
!! TTTAACGTTTTAATGACGAC+AGG - chr4_2:9733544-9733563 None:intergenic 30.0%
! CAAAGAAAAGCATACTATAC+AGG + chr4_2:9733616-9733635 Msa0587830:intron 30.0%
TTTATGTACTACCTACTTTC+AGG + chr4_2:9733891-9733910 Msa0587830:intron 30.0%
ATGATGTATATCCTGTACTT+CGG + chr4_2:9733957-9733976 Msa0587830:intron 30.0%
TTGCTTTCTCTATCATTAAC+GGG - chr4_2:9734299-9734318 None:intergenic 30.0%
TTTACAATACCAAATGACAC+TGG + chr4_2:9734341-9734360 Msa0587830:CDS 30.0%
TTACAATACCAAATGACACT+GGG + chr4_2:9734342-9734361 Msa0587830:CDS 30.0%
GTAGATGAGATAATCAATGT+TGG - chr4_2:9734495-9734514 None:intergenic 30.0%
TACATGGAAATGGTTGTAAA+TGG + chr4_2:9734772-9734791 Msa0587830:intron 30.0%
TGCGTGCAAAAAAGTTATTT+CGG - chr4_2:9735208-9735227 None:intergenic 30.0%
!! GCCTAAATAAGATTGATTTG+TGG + chr4_2:9735325-9735344 Msa0587830:intron 30.0%
! TTTTGTTCTCTTCTATTTGC+AGG + chr4_2:9735376-9735395 Msa0587830:intron 30.0%
! TTTCAATATTTTTCCCTCTC+TGG + chr4_2:9735400-9735419 Msa0587830:CDS 30.0%
CAAAACTTGAAGTAGATTTC+TGG + chr4_2:9735448-9735467 Msa0587830:CDS 30.0%
! TTCTTTGTTGAATCTGAAAC+AGG + chr4_2:9735578-9735597 Msa0587830:intron 30.0%
!!! ATACACACAAGCTGTTTTTT+TGG + chr4_2:9735718-9735737 Msa0587830:three_prime_UTR 30.0%
!!! TACACACAAGCTGTTTTTTT+GGG + chr4_2:9735719-9735738 Msa0587830:three_prime_UTR 30.0%
TCTTCATTTCAACTCATTCT+AGG + chr4_2:9735752-9735771 Msa0587830:three_prime_UTR 30.0%
!!! AAAGTTGGGTGTTTTGTTTT+TGG + chr4_2:9735830-9735849 Msa0587830:three_prime_UTR 30.0%
! GAGCAATTGCTCAATGTTTT+TGG - chr4_2:9723748-9723767 None:intergenic 35.0%
ATTACTTTCAATCTCTCCAC+TGG + chr4_2:9723901-9723920 Msa0587830:CDS 35.0%
ATATGAAAGAGACTTACGAG+AGG - chr4_2:9723949-9723968 None:intergenic 35.0%
TGAATTGTAGTTCAGTGTAG+CGG - chr4_2:9724631-9724650 None:intergenic 35.0%
! TTGGTAGATTGTTGTTAGAG+AGG + chr4_2:9724755-9724774 Msa0587830:intron 35.0%
GAGTGTGCGATATCATAAAA+AGG + chr4_2:9724861-9724880 Msa0587830:intron 35.0%
!! CATCGAACAGTTATCGATTT+AGG - chr4_2:9725028-9725047 None:intergenic 35.0%
TAGTCTGAAAACTCTTCATG+AGG + chr4_2:9725741-9725760 Msa0587830:intron 35.0%
! GTTTCACTCTAAGAGCTTAA+TGG + chr4_2:9725903-9725922 Msa0587830:intron 35.0%
CTGGAAATGAACTATCCATT+TGG - chr4_2:9726023-9726042 None:intergenic 35.0%
CTTAGTGCAAAAGGATAGTT+TGG + chr4_2:9726276-9726295 Msa0587830:CDS 35.0%
AAAAGAAAAGTAGGCTCATC+GGG - chr4_2:9726718-9726737 None:intergenic 35.0%
GAAAAGAAAAGTAGGCTCAT+CGG - chr4_2:9726719-9726738 None:intergenic 35.0%
!!! TTTTTTTACTCTTTCGGCAG+TGG + chr4_2:9726750-9726769 Msa0587830:intron 35.0%
!!! TTTTTTACTCTTTCGGCAGT+GGG + chr4_2:9726751-9726770 Msa0587830:intron 35.0%
ACTCAGGAAAAATTAGCTCA+TGG + chr4_2:9726845-9726864 Msa0587830:intron 35.0%
! TCTTAGACAAGAATTAGCCT+GGG + chr4_2:9726918-9726937 Msa0587830:CDS 35.0%
AACCACAACAAAAACGTGTA+GGG - chr4_2:9727120-9727139 None:intergenic 35.0%
AAACCACAACAAAAACGTGT+AGG - chr4_2:9727121-9727140 None:intergenic 35.0%
ACATTGAAGTAAATGCCACA+CGG - chr4_2:9727253-9727272 None:intergenic 35.0%
TAACGAATGGCAGATTATGT+TGG - chr4_2:9727406-9727425 None:intergenic 35.0%
GCAACGTTGAAAATAACGAA+TGG - chr4_2:9727419-9727438 None:intergenic 35.0%
GTGTGTGAATCAAATCTTAC+AGG + chr4_2:9727523-9727542 Msa0587830:CDS 35.0%
ATAACACCTGCATATTACTC+AGG - chr4_2:9727550-9727569 None:intergenic 35.0%
CTGAGTTCAAACATTGTGAT+TGG + chr4_2:9727571-9727590 Msa0587830:intron 35.0%
AGCATATTTACTCACCAAAG+TGG - chr4_2:9727726-9727745 None:intergenic 35.0%
CAGAGAAAAGAACAGCATAA+CGG - chr4_2:9727811-9727830 None:intergenic 35.0%
AAATGAATTCCATGTTTCCC+AGG - chr4_2:9728096-9728115 None:intergenic 35.0%
CAGAACTTAGGAGATCAATA+CGG - chr4_2:9728280-9728299 None:intergenic 35.0%
TATTGATCTCCTAAGTTCTG+AGG + chr4_2:9728280-9728299 Msa0587830:intron 35.0%
! ATTGATCTCCTAAGTTCTGA+GGG + chr4_2:9728281-9728300 Msa0587830:intron 35.0%
AATAACAACCCTCAGAACTT+AGG - chr4_2:9728292-9728311 None:intergenic 35.0%
!! TAATGAATTTGCTGATGGCA+GGG - chr4_2:9728337-9728356 None:intergenic 35.0%
CATCAGCAAATTCATTAGGA+CGG + chr4_2:9728340-9728359 Msa0587830:CDS 35.0%
AAGGACATCTTGTGACTATA+AGG + chr4_2:9728407-9728426 Msa0587830:intron 35.0%
!! TGGCAGTCCTTTTTAACTAA+TGG + chr4_2:9728496-9728515 Msa0587830:intron 35.0%
!! TCCTTTTTAACTAATGGTCG+TGG + chr4_2:9728502-9728521 Msa0587830:CDS 35.0%
TCCACGACCATTAGTTAAAA+AGG - chr4_2:9728506-9728525 None:intergenic 35.0%
ACTCACTCAATACCTTTCAA+AGG - chr4_2:9728772-9728791 None:intergenic 35.0%
TTTCATAATCGATCTGTTGC+GGG + chr4_2:9728863-9728882 Msa0587830:CDS 35.0%
! ACACACTCTTGAGACATTTT+AGG - chr4_2:9729282-9729301 None:intergenic 35.0%
! AAATGTCTCAAGAGTGTGTT+TGG + chr4_2:9729283-9729302 Msa0587830:intron 35.0%
ATATTCAACAACTGTGATGG+GGG - chr4_2:9729808-9729827 None:intergenic 35.0%
CATATTCAACAACTGTGATG+GGG - chr4_2:9729809-9729828 None:intergenic 35.0%
GCATATTCAACAACTGTGAT+GGG - chr4_2:9729810-9729829 None:intergenic 35.0%
TGCATATTCAACAACTGTGA+TGG - chr4_2:9729811-9729830 None:intergenic 35.0%
ATCACAGTTGTTGAATATGC+AGG + chr4_2:9729810-9729829 Msa0587830:intron 35.0%
! GGTTGTGTATATTTTTCCCT+TGG + chr4_2:9730106-9730125 Msa0587830:intron 35.0%
AACACGTCACTATAAACAGA+AGG - chr4_2:9730151-9730170 None:intergenic 35.0%
TATTCCAGATATAGACGCAA+GGG - chr4_2:9730199-9730218 None:intergenic 35.0%
ATATTCCAGATATAGACGCA+AGG - chr4_2:9730200-9730219 None:intergenic 35.0%
! CGTCTATATCTGGAATATGT+TGG + chr4_2:9730202-9730221 Msa0587830:CDS 35.0%
TGGACATCTGTACCAAAAAA+TGG + chr4_2:9730222-9730241 Msa0587830:CDS 35.0%
TTACATAACTGAATGTGCAG+AGG - chr4_2:9730442-9730461 None:intergenic 35.0%
! AAAGGCTGCACAAAATTTTG+TGG - chr4_2:9730476-9730495 None:intergenic 35.0%
! AAATTTTGTGCAGCCTTTGA+TGG + chr4_2:9730478-9730497 Msa0587830:intron 35.0%
AGATGCCATGAAATACATTC+AGG + chr4_2:9730538-9730557 Msa0587830:CDS 35.0%
AACAGTTGAATACAATGGGA+AGG - chr4_2:9730701-9730720 None:intergenic 35.0%
GGACAACAGTTGAATACAAT+GGG - chr4_2:9730705-9730724 None:intergenic 35.0%
TGGACAACAGTTGAATACAA+TGG - chr4_2:9730706-9730725 None:intergenic 35.0%
!! ATAAAACGGACTACAGACAT+TGG - chr4_2:9730726-9730745 None:intergenic 35.0%
TTGCTTTACTTACTGCTCTT+TGG - chr4_2:9730911-9730930 None:intergenic 35.0%
AAATTGGATTCACCTCCTTT+CGG + chr4_2:9731027-9731046 Msa0587830:intron 35.0%
AATTAAGCATAACCGAAAGG+AGG - chr4_2:9731042-9731061 None:intergenic 35.0%
CTCAATTAAGCATAACCGAA+AGG - chr4_2:9731045-9731064 None:intergenic 35.0%
AGATCCACAACTAACATGAA+GGG - chr4_2:9731518-9731537 None:intergenic 35.0%
AAGATCCACAACTAACATGA+AGG - chr4_2:9731519-9731538 None:intergenic 35.0%
GTTTCTTAACTTATGCCTCA+AGG + chr4_2:9731736-9731755 Msa0587830:intron 35.0%
TTAGTACCCGTATGTAATCA+TGG + chr4_2:9731897-9731916 Msa0587830:intron 35.0%
TACCTACCATGATTACATAC+GGG - chr4_2:9731906-9731925 None:intergenic 35.0%
AGAGTGTGGTTTCAATTTCT+TGG + chr4_2:9731990-9732009 Msa0587830:intron 35.0%
GGAAGGATGATCTCAAATAA+TGG - chr4_2:9732080-9732099 None:intergenic 35.0%
ACAGGCATTAGTTAAACTAG+AGG + chr4_2:9732129-9732148 Msa0587830:intron 35.0%
CAGGCATTAGTTAAACTAGA+GGG + chr4_2:9732130-9732149 Msa0587830:intron 35.0%
CATTAGTTAAACTAGAGGGA+TGG + chr4_2:9732134-9732153 Msa0587830:CDS 35.0%
!!! CAAGATATCAGCTTTTTCAG+GGG - chr4_2:9732206-9732225 None:intergenic 35.0%
!!! CCAAGATATCAGCTTTTTCA+GGG - chr4_2:9732207-9732226 None:intergenic 35.0%
!! ACCAAGATATCAGCTTTTTC+AGG - chr4_2:9732208-9732227 None:intergenic 35.0%
! ATTTAGGTTAGCGAATTGCT+AGG + chr4_2:9732304-9732323 Msa0587830:intron 35.0%
GTACCAGTGGATGAAATAAA+AGG - chr4_2:9732428-9732447 None:intergenic 35.0%
ATGTTAATGACGATTGACAG+AGG - chr4_2:9732548-9732567 None:intergenic 35.0%
AAATACATAAATCCTCGCTG+AGG + chr4_2:9732739-9732758 Msa0587830:intron 35.0%
! CTTCATCATTCTCCTTTTCT+TGG + chr4_2:9732922-9732941 Msa0587830:intron 35.0%
TACAAATTCCTTGAAAACCC+AGG + chr4_2:9733150-9733169 Msa0587830:intron 35.0%
CTAGAACACTTGTGAAACAA+TGG - chr4_2:9733323-9733342 None:intergenic 35.0%
CATTGTTTCACAAGTGTTCT+AGG + chr4_2:9733321-9733340 Msa0587830:intron 35.0%
!! AGGCAACTTTACTTGTTGTT+TGG - chr4_2:9733587-9733606 None:intergenic 35.0%
! GCTTTTCTTTGAACTAGAGA+AGG - chr4_2:9733607-9733626 None:intergenic 35.0%
!!! AAGTTTTAACTACCACGCTT+GGG + chr4_2:9733724-9733743 Msa0587830:intron 35.0%
GATTAATAGATGCCATAGTG+TGG + chr4_2:9733772-9733791 Msa0587830:intron 35.0%
AAACTTGTGTACCTGAAAGT+AGG - chr4_2:9733905-9733924 None:intergenic 35.0%
TAAATTGATGTCCGAAGTAC+AGG - chr4_2:9733971-9733990 None:intergenic 35.0%
!! TCTGGTTGTATTTCAGGTTA+AGG + chr4_2:9734027-9734046 Msa0587830:intron 35.0%
ACCAACATGTAAACCAAGAA+CGG - chr4_2:9734183-9734202 None:intergenic 35.0%
! CTTGGTTTACATGTTGGTTA+TGG + chr4_2:9734185-9734204 Msa0587830:intron 35.0%
!!! CTTTCTGTTGGTTTTGTCTT+TGG + chr4_2:9734245-9734264 Msa0587830:intron 35.0%
!!! TGTTGGTTTTGTCTTTGGAT+AGG + chr4_2:9734250-9734269 Msa0587830:intron 35.0%
!!! TCTCTATCATTAACGGGTTT+TGG - chr4_2:9734293-9734312 None:intergenic 35.0%
TCTATTCCTATAGACTGAGT+AGG + chr4_2:9734401-9734420 Msa0587830:intron 35.0%
ATAAAGCCTACTCAGTCTAT+AGG - chr4_2:9734410-9734429 None:intergenic 35.0%
TTTCTTAACTAGTCCCCTAA+GGG - chr4_2:9734570-9734589 None:intergenic 35.0%
ACATTGAGTGTCTATTTGGT+TGG - chr4_2:9734824-9734843 None:intergenic 35.0%
TTTACAAGGATGTGCATCTT+GGG + chr4_2:9734974-9734993 Msa0587830:CDS 35.0%
GTACATATCAGCACAAAACA+TGG - chr4_2:9735135-9735154 None:intergenic 35.0%
!!! TCTACTTCAAGTTTTGAACC+TGG - chr4_2:9735444-9735463 None:intergenic 35.0%
! GTGAGTAAAGTCACCTTTTT+AGG - chr4_2:9735486-9735505 None:intergenic 35.0%
! TGTTGAATCTGAAACAGGTT+TGG + chr4_2:9735583-9735602 Msa0587830:intron 35.0%
! AAGAGTGAAGCTCGATTTTG+CGG + chr4_2:9723841-9723860 Msa0587830:CDS 40.0%
CAGTGAAGTTGCAGTATGAA+TGG - chr4_2:9724015-9724034 None:intergenic 40.0%
! GTGACCTCGTGAAGAATTTT+CGG - chr4_2:9724366-9724385 None:intergenic 40.0%
TTACAATGGAGCAGTTTCAC+TGG - chr4_2:9724588-9724607 None:intergenic 40.0%
TGCTCCATTGTAAGCATTTG+AGG + chr4_2:9724595-9724614 Msa0587830:intron 40.0%
GCTCCATTGTAAGCATTTGA+GGG + chr4_2:9724596-9724615 Msa0587830:intron 40.0%
GAACCCTCAAATGCTTACAA+TGG - chr4_2:9724602-9724621 None:intergenic 40.0%
ACAATTCACAATGCTGTCAC+TGG + chr4_2:9724643-9724662 Msa0587830:intron 40.0%
CAATTCACAATGCTGTCACT+GGG + chr4_2:9724644-9724663 Msa0587830:intron 40.0%
ACGAGGATTTAACTAACCAG+CGG - chr4_2:9724789-9724808 None:intergenic 40.0%
CGTGTATGATATAGTGCACT+AGG - chr4_2:9724891-9724910 None:intergenic 40.0%
CAATGAAGTTGCAGTGTGAA+TGG - chr4_2:9724973-9724992 None:intergenic 40.0%
CATTCACACTGCAACTTCAT+TGG + chr4_2:9724971-9724990 Msa0587830:intron 40.0%
TGGAGCAGTTTCACTAGAAA+AGG - chr4_2:9725053-9725072 None:intergenic 40.0%
! AAGGAGCAACAGTTAAGTTG+CGG - chr4_2:9725457-9725476 None:intergenic 40.0%
CTCAAATGCTCTCAATCAAG+CGG - chr4_2:9725542-9725561 None:intergenic 40.0%
! GTGTTAGATTGCTGTTAGAG+CGG + chr4_2:9725659-9725678 Msa0587830:intron 40.0%
!!! TTTTTTCAGATGCGCTCCTA+CGG + chr4_2:9725783-9725802 Msa0587830:intron 40.0%
! GTACAGGACAGTGTTAGTTT+GGG - chr4_2:9725857-9725876 None:intergenic 40.0%
AGTACAGGACAGTGTTAGTT+TGG - chr4_2:9725858-9725877 None:intergenic 40.0%
AAATTTCCCGTGCTTTCCAA+GGG + chr4_2:9725973-9725992 Msa0587830:intron 40.0%
ATATCACAAGTAATCCCCCT+TGG - chr4_2:9725992-9726011 None:intergenic 40.0%
CTGCATAAGCTCAAGAAATC+AGG - chr4_2:9726050-9726069 None:intergenic 40.0%
! CTATCCTTTTGCACTAAGCT+TGG - chr4_2:9726274-9726293 None:intergenic 40.0%
AACTACATGACTACTCCACT+GGG - chr4_2:9726350-9726369 None:intergenic 40.0%
!! CTCATGGATTGATTTGGACT+CGG + chr4_2:9726861-9726880 Msa0587830:CDS 40.0%
CTCTTAGACAAGAATTAGCC+TGG + chr4_2:9726917-9726936 Msa0587830:CDS 40.0%
ACTGGAAAGTTCGTTCAACT+CGG - chr4_2:9726979-9726998 None:intergenic 40.0%
ACGAACTTTCCAGTTTCCAA+CGG + chr4_2:9726985-9727004 Msa0587830:intron 40.0%
! TTTCCAGTTTCCAACGGATT+AGG + chr4_2:9726991-9727010 Msa0587830:intron 40.0%
! TTCCCTACACGTTTTTGTTG+TGG + chr4_2:9727115-9727134 Msa0587830:intron 40.0%
AGCAGATTTGTAGCAGATAC+AGG - chr4_2:9727180-9727199 None:intergenic 40.0%
GTATCTGCTACAAATCTGCT+TGG + chr4_2:9727180-9727199 Msa0587830:intron 40.0%
AAATGCCACACGGTTCATAA+AGG - chr4_2:9727243-9727262 None:intergenic 40.0%
! AGCATATGGCGGAAATATAG+TGG - chr4_2:9727351-9727370 None:intergenic 40.0%
TGTAACGTTGTAGCATATGG+CGG - chr4_2:9727362-9727381 None:intergenic 40.0%
TTAGCACAAGAGGTTCCTTT+CGG - chr4_2:9727494-9727513 None:intergenic 40.0%
CCTCTTGTGCTAATTATGCA+CGG + chr4_2:9727501-9727520 Msa0587830:CDS 40.0%
TTGTAATACAGTTGTGGCTC+AGG + chr4_2:9727654-9727673 Msa0587830:intron 40.0%
TGCATCCATAGAGTCATCAT+CGG - chr4_2:9727696-9727715 None:intergenic 40.0%
!!! TTGATTTTTAGGTCGACACC+TGG + chr4_2:9728075-9728094 Msa0587830:intron 40.0%
!!! TGATTTTTAGGTCGACACCT+GGG + chr4_2:9728076-9728095 Msa0587830:intron 40.0%
!! CTAATGAATTTGCTGATGGC+AGG - chr4_2:9728338-9728357 None:intergenic 40.0%
CTGCCATCAGCAAATTCATT+AGG + chr4_2:9728336-9728355 Msa0587830:CDS 40.0%
!! CGTCCTAATGAATTTGCTGA+TGG - chr4_2:9728342-9728361 None:intergenic 40.0%
AATTCATTAGGACGGTGGTT+TGG + chr4_2:9728348-9728367 Msa0587830:CDS 40.0%
ATTCATTAGGACGGTGGTTT+GGG + chr4_2:9728349-9728368 Msa0587830:CDS 40.0%
! GCCATCAGATGTTGATTACT+CGG + chr4_2:9728545-9728564 Msa0587830:CDS 40.0%
ACCGAGTAATCAACATCTGA+TGG - chr4_2:9728549-9728568 None:intergenic 40.0%
! TACGCAAGTTGAGCAGTTAT+TGG + chr4_2:9728628-9728647 Msa0587830:intron 40.0%
TTTGCATCCACACTTGCTTT+AGG - chr4_2:9728839-9728858 None:intergenic 40.0%
GTGATGAAGAGAAGATCGAA+GGG - chr4_2:9729157-9729176 None:intergenic 40.0%
TGTGATGAAGAGAAGATCGA+AGG - chr4_2:9729158-9729177 None:intergenic 40.0%
CACAAAGTGAGGAAGATAAG+AGG - chr4_2:9730050-9730069 None:intergenic 40.0%
!! TAAACAGAAGGTTTTGGCCA+AGG - chr4_2:9730139-9730158 None:intergenic 40.0%
GGGATGTCTTTGTGAATCTA+AGG - chr4_2:9730179-9730198 None:intergenic 40.0%
!!! CAGGAAGAGGATCCATTTTT+TGG - chr4_2:9730237-9730256 None:intergenic 40.0%
! TTTTATGCCAGCTGGGATAT+AGG + chr4_2:9730344-9730363 Msa0587830:intron 40.0%
TTTATGCCAGCTGGGATATA+GGG + chr4_2:9730345-9730364 Msa0587830:intron 40.0%
AATAATCCCTATATCCCAGC+TGG - chr4_2:9730354-9730373 None:intergenic 40.0%
! GCAGCCTTTGATGGATAATT+TGG + chr4_2:9730487-9730506 Msa0587830:intron 40.0%
! GCCTTTGATGGATAATTTGG+AGG + chr4_2:9730490-9730509 Msa0587830:intron 40.0%
GCCTCCAAATTATCCATCAA+AGG - chr4_2:9730494-9730513 None:intergenic 40.0%
AGTATAGCTACAGGACTTCA+AGG - chr4_2:9730630-9730649 None:intergenic 40.0%
AGAGGTGATAGTATAGCTAC+AGG - chr4_2:9730639-9730658 None:intergenic 40.0%
GCTCATCATGTTTGTAGTAG+AGG - chr4_2:9730657-9730676 None:intergenic 40.0%
TTGAATACAATGGGAAGGAG+GGG - chr4_2:9730696-9730715 None:intergenic 40.0%
GTTGAATACAATGGGAAGGA+GGG - chr4_2:9730697-9730716 None:intergenic 40.0%
AGTTGAATACAATGGGAAGG+AGG - chr4_2:9730698-9730717 None:intergenic 40.0%
CTGCTCTTTGGTACTGTAAA+AGG - chr4_2:9730899-9730918 None:intergenic 40.0%
AGACATGATTCCTGATGAAG+AGG + chr4_2:9730935-9730954 Msa0587830:CDS 40.0%
TTAACAGATGCCTCTTCATC+AGG - chr4_2:9730948-9730967 None:intergenic 40.0%
AATTGCACTCAATTCCCTTG+AGG - chr4_2:9731188-9731207 None:intergenic 40.0%
! AACAGTGCTTTGAATGCATG+TGG + chr4_2:9731243-9731262 Msa0587830:intron 40.0%
! TCATGCTAACTTGTGCCTTT+AGG + chr4_2:9731596-9731615 Msa0587830:intron 40.0%
! CATGCTAACTTGTGCCTTTA+GGG + chr4_2:9731597-9731616 Msa0587830:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+AGG - chr4_2:9731754-9731773 None:intergenic 40.0%
GCTGTTTGTCATGATGCTAT+TGG + chr4_2:9731844-9731863 Msa0587830:intron 40.0%
TACCCGTATGTAATCATGGT+AGG + chr4_2:9731901-9731920 Msa0587830:intron 40.0%
CTCGTGTCTAAATTGATGGA+AGG - chr4_2:9732097-9732116 None:intergenic 40.0%
! CACGAGTTATTTGTTGGAAC+AGG + chr4_2:9732111-9732130 Msa0587830:intron 40.0%
CCCTGAAAAAGCTGATATCT+TGG + chr4_2:9732204-9732223 Msa0587830:CDS 40.0%
!! CTCTAGGGTCTGATTTATGT+TGG + chr4_2:9732276-9732295 Msa0587830:intron 40.0%
! AGCGAATTGCTAGGTTCTTT+TGG + chr4_2:9732313-9732332 Msa0587830:CDS 40.0%
! GATGGTATTGAAATTCCACC+CGG - chr4_2:9732391-9732410 None:intergenic 40.0%
! GATTGACAGAGGCAATGTTT+TGG - chr4_2:9732537-9732556 None:intergenic 40.0%
GAATCACTATTAGCCAACAG+AGG + chr4_2:9732632-9732651 Msa0587830:intron 40.0%
GAAGTCCGAAATTTCTCTGT+TGG + chr4_2:9732704-9732723 Msa0587830:intron 40.0%
GCTCACCAACAGAGAAATTT+CGG - chr4_2:9732712-9732731 None:intergenic 40.0%
ACAATCATAGAATCACTGCG+CGG - chr4_2:9733003-9733022 None:intergenic 40.0%
!! GTTTCACAAGTGTTCTAGGA+AGG + chr4_2:9733325-9733344 Msa0587830:intron 40.0%
!!! GAAGTTTTAACTACCACGCT+TGG + chr4_2:9733723-9733742 Msa0587830:intron 40.0%
CATAGTGTGGAGTGTATCTT+GGG + chr4_2:9733785-9733804 Msa0587830:intron 40.0%
AAGTTTCATCCAACCAGTGA+CGG + chr4_2:9733919-9733938 Msa0587830:CDS 40.0%
!! TATAACTTTGAAGCCGTCAC+TGG - chr4_2:9733935-9733954 None:intergenic 40.0%
! CTCACTTCTGGTTGTATTTC+AGG + chr4_2:9734021-9734040 Msa0587830:intron 40.0%
GTGAATCTATTCACCGTTCT+TGG + chr4_2:9734167-9734186 Msa0587830:intron 40.0%
ACCGTTCTTGGTTTACATGT+TGG + chr4_2:9734179-9734198 Msa0587830:intron 40.0%
GTACTTACCATGTACCATTG+CGG - chr4_2:9734369-9734388 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+AGG + chr4_2:9734552-9734571 Msa0587830:intron 40.0%
AATGCTAACAAGTGCCCTTA+GGG + chr4_2:9734553-9734572 Msa0587830:intron 40.0%
GTTTCTTAACTAGTCCCCTA+AGG - chr4_2:9734571-9734590 None:intergenic 40.0%
TGCAACATCTGTATCGAGAA+GGG - chr4_2:9734883-9734902 None:intergenic 40.0%
ATGCAACATCTGTATCGAGA+AGG - chr4_2:9734884-9734903 None:intergenic 40.0%
CTTTGATGCCACTCTTTACA+AGG + chr4_2:9734960-9734979 Msa0587830:CDS 40.0%
ATGCACATCCTTGTAAAGAG+TGG - chr4_2:9734971-9734990 None:intergenic 40.0%
CTTTACAAGGATGTGCATCT+TGG + chr4_2:9734973-9734992 Msa0587830:CDS 40.0%
TCTTGGGATTGAACCTTCAA+CGG + chr4_2:9734990-9735009 Msa0587830:CDS 40.0%
CAATACCAGCTGAACATGTT+TGG - chr4_2:9735021-9735040 None:intergenic 40.0%
! TGAAACAGGTTTGGTATGAG+TGG + chr4_2:9735592-9735611 Msa0587830:intron 40.0%
!! TTACTGTTGTGGATTGGAGA+CGG - chr4_2:9735636-9735655 None:intergenic 40.0%
CCAATCCACAACAGTAATGA+CGG + chr4_2:9735639-9735658 Msa0587830:CDS 40.0%
TATGACCGTCATTACTGTTG+TGG - chr4_2:9735647-9735666 None:intergenic 40.0%
AACAGTAATGACGGTCATAC+TGG + chr4_2:9735648-9735667 Msa0587830:CDS 40.0%
ACAGTAATGACGGTCATACT+GGG + chr4_2:9735649-9735668 Msa0587830:CDS 40.0%
GAGTTGAAATGAAGACAGAC+TGG - chr4_2:9735747-9735766 None:intergenic 40.0%
TCATCAGCGAAAATGCCTCT+AGG + chr4_2:9723802-9723821 Msa0587830:exon 45.0%
! AAAATGCCTCTAGGAGACAG+AGG + chr4_2:9723811-9723830 Msa0587830:exon 45.0%
TACTGACCACACACACACAA+AGG - chr4_2:9724045-9724064 None:intergenic 45.0%
!! GAGAGCATCCAAGTATTCAC+TGG + chr4_2:9724124-9724143 Msa0587830:intron 45.0%
AGTGCGATCCAGTGAATACT+TGG - chr4_2:9724135-9724154 None:intergenic 45.0%
TGGTCCGAAAATTCTTCACG+AGG + chr4_2:9724359-9724378 Msa0587830:intron 45.0%
CAATGATGTCGCAGTGTGAA+TGG - chr4_2:9724500-9724519 None:intergenic 45.0%
TACTGACCACACGCACAAAA+AGG - chr4_2:9724528-9724547 None:intergenic 45.0%
TGGAGCAGTTTCACTGGAAA+AGG - chr4_2:9724582-9724601 None:intergenic 45.0%
GTAAGCATTTGAGGGTTCAC+TGG + chr4_2:9724604-9724623 Msa0587830:intron 45.0%
TAGAGAGGTTAAGTAACCGC+TGG + chr4_2:9724770-9724789 Msa0587830:intron 45.0%
! CAGTTAAGTTGCGGTGTGAA+TGG - chr4_2:9725448-9725467 None:intergenic 45.0%
TCAAGCGGCTTCACTAGAAA+AGG - chr4_2:9725527-9725546 None:intergenic 45.0%
!! CGCTTGATTGAGAGCATTTG+AGG + chr4_2:9725540-9725559 Msa0587830:intron 45.0%
!! GAGAGCATTTGAGGATTCAC+TGG + chr4_2:9725549-9725568 Msa0587830:intron 45.0%
! CTTGGAAAGCACGGGAAATT+TGG - chr4_2:9725974-9725993 None:intergenic 45.0%
CAAATTTCCCGTGCTTTCCA+AGG + chr4_2:9725972-9725991 Msa0587830:intron 45.0%
AATTTCCCGTGCTTTCCAAG+GGG + chr4_2:9725974-9725993 Msa0587830:intron 45.0%
GCTCAAGAAATCAGGAAAGC+TGG - chr4_2:9726042-9726061 None:intergenic 45.0%
TTCAGACGGATCCTTCCTAT+AGG + chr4_2:9726248-9726267 Msa0587830:intron 45.0%
ACTAAGCTTGGCCTATAGGA+AGG - chr4_2:9726262-9726281 None:intergenic 45.0%
TTGCACTAAGCTTGGCCTAT+AGG - chr4_2:9726266-9726285 None:intergenic 45.0%
TAGGCCAAGCTTAGTGCAAA+AGG + chr4_2:9726267-9726286 Msa0587830:CDS 45.0%
CAACTACATGACTACTCCAC+TGG - chr4_2:9726351-9726370 None:intergenic 45.0%
CAGTGGAGTAGTCATGTAGT+TGG + chr4_2:9726349-9726368 Msa0587830:CDS 45.0%
TAATGAGAGATGAGAAGCCC+AGG - chr4_2:9726938-9726957 None:intergenic 45.0%
GGCTTCTCATCTCTCATTAC+AGG + chr4_2:9726939-9726958 Msa0587830:CDS 45.0%
GAAGTCCTTTATGAACCGTG+TGG + chr4_2:9727235-9727254 Msa0587830:intron 45.0%
! ATAATAGGCGTTGCAGCCTA+CGG - chr4_2:9727326-9727345 None:intergenic 45.0%
TAGCACAAGAGGTTCCTTTC+GGG - chr4_2:9727493-9727512 None:intergenic 45.0%
CCGTGCATAATTAGCACAAG+AGG - chr4_2:9727504-9727523 None:intergenic 45.0%
ACAGGACCTGAGTAATATGC+AGG + chr4_2:9727541-9727560 Msa0587830:CDS 45.0%
TCATCATCGGGAACAACCAA+GGG - chr4_2:9727683-9727702 None:intergenic 45.0%
TGTTCCCGATGATGACTCTA+TGG + chr4_2:9727688-9727707 Msa0587830:CDS 45.0%
GCATCCATAGAGTCATCATC+GGG - chr4_2:9727695-9727714 None:intergenic 45.0%
ATGCTAGAAACATGCCGTGA+AGG + chr4_2:9727741-9727760 Msa0587830:intron 45.0%
CGCAGAAGACAAAACCTTCA+CGG - chr4_2:9727758-9727777 None:intergenic 45.0%
! TGCTGTTCTTTTCTCTGCAC+AGG + chr4_2:9727814-9727833 Msa0587830:intron 45.0%
CAGCAAATTCATTAGGACGG+TGG + chr4_2:9728343-9728362 Msa0587830:CDS 45.0%
TTCATTAGGACGGTGGTTTG+GGG + chr4_2:9728350-9728369 Msa0587830:CDS 45.0%
! AATCAACATCTGATGGCGCT+TGG - chr4_2:9728542-9728561 None:intergenic 45.0%
AGAACTGTAGGACAGCATTG+TGG - chr4_2:9728666-9728685 None:intergenic 45.0%
TGGTCATCCTAAAGCAAGTG+TGG + chr4_2:9728829-9728848 Msa0587830:CDS 45.0%
! CTCAAGAGTGTGTTTGGATG+AGG + chr4_2:9729289-9729308 Msa0587830:intron 45.0%
! TGTGATGGGGGAATGTTATG+AGG - chr4_2:9729796-9729815 None:intergenic 45.0%
! ACATTTTGCGGCTTCAATGG+AGG - chr4_2:9729990-9730009 None:intergenic 45.0%
! GAGACATTTTGCGGCTTCAA+TGG - chr4_2:9729993-9730012 None:intergenic 45.0%
TCATGTGCACACACAAAGTG+AGG - chr4_2:9730061-9730080 None:intergenic 45.0%
!! GAAGGTTTTGGCCAAGGATT+CGG - chr4_2:9730133-9730152 None:intergenic 45.0%
ACATCCCTTGCGTCTATATC+TGG + chr4_2:9730192-9730211 Msa0587830:CDS 45.0%
AAACGTTCTTGCTCAGGAAG+AGG - chr4_2:9730250-9730269 None:intergenic 45.0%
! TCCTGAGCAAGAACGTTTTG+AGG + chr4_2:9730252-9730271 Msa0587830:CDS 45.0%
ACCTCAAAACGTTCTTGCTC+AGG - chr4_2:9730256-9730275 None:intergenic 45.0%
! TCGCAACTTTTTATGCCAGC+TGG + chr4_2:9730336-9730355 Msa0587830:intron 45.0%
! CGCAACTTTTTATGCCAGCT+GGG + chr4_2:9730337-9730356 Msa0587830:intron 45.0%
! TCAATACATTGACTGAGGGG+AGG - chr4_2:9731130-9731149 None:intergenic 45.0%
!! TACTCACTGCTAGGTACTGA+TGG + chr4_2:9731280-9731299 Msa0587830:intron 45.0%
!! TGCTAGGTACTGATGGTTGT+TGG + chr4_2:9731287-9731306 Msa0587830:intron 45.0%
TACTGATGGTTGTTGGAGCA+GGG + chr4_2:9731294-9731313 Msa0587830:CDS 45.0%
TTGTAGGCTTCGGAAGAAAC+TGG + chr4_2:9731442-9731461 Msa0587830:intron 45.0%
TGTAGGCTTCGGAAGAAACT+GGG + chr4_2:9731443-9731462 Msa0587830:intron 45.0%
TGAAGGGTCACAACTGCATT+TGG - chr4_2:9731502-9731521 None:intergenic 45.0%
GTGACCCTTCATGTTAGTTG+TGG + chr4_2:9731511-9731530 Msa0587830:intron 45.0%
!! TGCCTTTAGGGCACAAGTTA+AGG + chr4_2:9731609-9731628 Msa0587830:intron 45.0%
!! CTCCTTAACTTGTGCCCTAA+AGG - chr4_2:9731614-9731633 None:intergenic 45.0%
ATCTCTTGTTCGTGAGAGTG+TGG + chr4_2:9731976-9731995 Msa0587830:intron 45.0%
AGTTAAACTAGAGGGATGGG+AGG + chr4_2:9732138-9732157 Msa0587830:CDS 45.0%
TCTCAAGTGACATGCGCTAT+TGG + chr4_2:9732176-9732195 Msa0587830:CDS 45.0%
!!! AGCCCAGAGGTTTTTAAAGC+CGG + chr4_2:9732369-9732388 Msa0587830:CDS 45.0%
!! ACCCGGCTTTAAAAACCTCT+GGG - chr4_2:9732374-9732393 None:intergenic 45.0%
! ATCCACTGGTACCCATGTTT+TGG + chr4_2:9732436-9732455 Msa0587830:intron 45.0%
! TCCACTGGTACCCATGTTTT+GGG + chr4_2:9732437-9732456 Msa0587830:intron 45.0%
CACTATTAGCCAACAGAGGT+TGG + chr4_2:9732636-9732655 Msa0587830:intron 45.0%
TCATATGTGCCAACCTCTGT+TGG - chr4_2:9732648-9732667 None:intergenic 45.0%
!! ATGTTTTGGGCCTTGCATGA+GGG + chr4_2:9732765-9732784 Msa0587830:intron 45.0%
!! ATGTTTTGGGCCTTGCATGA+GGG + chr4_2:9732765-9732784 Msa0587830:intron 45.0%
CTCTGCTGAATGCATTTCTC+CGG - chr4_2:9732973-9732992 None:intergenic 45.0%
!! GTGTATGATAGTGGCGTGAT+TGG + chr4_2:9733021-9733040 Msa0587830:intron 45.0%
!! CACAAGTGTTCTAGGAAGGA+AGG + chr4_2:9733329-9733348 Msa0587830:intron 45.0%
TTGGGAGACAACAATGGTGT+TGG + chr4_2:9733742-9733761 Msa0587830:intron 45.0%
!! CAACAATGGTGTTGGCTACA+TGG + chr4_2:9733750-9733769 Msa0587830:intron 45.0%
CCAAGATACACTCCACACTA+TGG - chr4_2:9733787-9733806 None:intergenic 45.0%
CCATAGTGTGGAGTGTATCT+TGG + chr4_2:9733784-9733803 Msa0587830:intron 45.0%
! AAGAAACGCACGGATTGACA+TGG - chr4_2:9734121-9734140 None:intergenic 45.0%
ATGCTAACAAGTGCCCTTAG+GGG + chr4_2:9734554-9734573 Msa0587830:intron 45.0%
!! GTGCTCTAGGACACTAGTTA+AGG - chr4_2:9734688-9734707 None:intergenic 45.0%
! ATGGGTTATGCTAGTGCTCT+AGG - chr4_2:9734701-9734720 None:intergenic 45.0%
CTGATATTGTGCGTACTCCA+TGG + chr4_2:9734918-9734937 Msa0587830:intron 45.0%
TCCATGGTCATAGGATTTGC+TGG + chr4_2:9734934-9734953 Msa0587830:intron 45.0%
!! ATGTTTGGTGTAGCCGTTGA+AGG - chr4_2:9735006-9735025 None:intergenic 45.0%
CTACACCAAACATGTTCAGC+TGG + chr4_2:9735013-9735032 Msa0587830:CDS 45.0%
ACACCTATTTGCGTGAAACC+AGG + chr4_2:9735423-9735442 Msa0587830:CDS 45.0%
GAACCTGGTTTCACGCAAAT+AGG - chr4_2:9735429-9735448 None:intergenic 45.0%
CCGTCATTACTGTTGTGGAT+TGG - chr4_2:9735642-9735661 None:intergenic 45.0%
TAATGACGGTCATACTGGGT+AGG + chr4_2:9735653-9735672 Msa0587830:CDS 45.0%
AATGACGGTCATACTGGGTA+GGG + chr4_2:9735654-9735673 Msa0587830:CDS 45.0%
!!! ATTAAAAAAAAATTAGTTTT+GGG - chr4_2:9726561-9726580 None:intergenic 5.0%
!!! TATTTTTTTCAAATAAATTT+TGG - chr4_2:9732499-9732518 None:intergenic 5.0%
!! AAAATAATTTAATCAATAAT+TGG - chr4_2:9733812-9733831 None:intergenic 5.0%
!! TAATAAATAATTAAATTACA+TGG + chr4_2:9734756-9734775 Msa0587830:intron 5.0%
TGCTCTCCTTTGTGTGTGTG+TGG + chr4_2:9724036-9724055 Msa0587830:intron 50.0%
TCTCAATCGAGCAGCTTCAG+CGG - chr4_2:9724108-9724127 None:intergenic 50.0%
CTTACTGACCACGCACACAA+GGG - chr4_2:9725001-9725020 None:intergenic 50.0%
TGCTCCATTGTGAGCATCTG+TGG + chr4_2:9725066-9725085 Msa0587830:intron 50.0%
GCTCCATTGTGAGCATCTGT+GGG + chr4_2:9725067-9725086 Msa0587830:intron 50.0%
GAACCCACAGATGCTCACAA+TGG - chr4_2:9725073-9725092 None:intergenic 50.0%
CTTACTGACCACGCACACAA+AGG - chr4_2:9725001-9725020 None:intergenic 50.0%
ACTGGCTAATTGGCTACCGT+AGG - chr4_2:9725802-9725821 None:intergenic 50.0%
ATTTCCCGTGCTTTCCAAGG+GGG + chr4_2:9725975-9725994 Msa0587830:intron 50.0%
! TAATCCCCCTTGGAAAGCAC+GGG - chr4_2:9725982-9726001 None:intergenic 50.0%
GTAATCCCCCTTGGAAAGCA+CGG - chr4_2:9725983-9726002 None:intergenic 50.0%
AAGTCTGACCCAGCAAATGG+CGG - chr4_2:9726313-9726332 None:intergenic 50.0%
ACCAAGTCTGACCCAGCAAA+TGG - chr4_2:9726316-9726335 None:intergenic 50.0%
CATGACTACTCCACTGGGAT+GGG - chr4_2:9726345-9726364 None:intergenic 50.0%
ACATGACTACTCCACTGGGA+TGG - chr4_2:9726346-9726365 None:intergenic 50.0%
GTGCCTAATCCGTTGGAAAC+TGG - chr4_2:9726997-9727016 None:intergenic 50.0%
!! GACAAGAGTGCCTAATCCGT+TGG - chr4_2:9727004-9727023 None:intergenic 50.0%
AGCACAAGAGGTTCCTTTCG+GGG - chr4_2:9727492-9727511 None:intergenic 50.0%
GTCATCATCGGGAACAACCA+AGG - chr4_2:9727684-9727703 None:intergenic 50.0%
GTCTTCTGCGTGTCGTATCT+TGG + chr4_2:9727768-9727787 Msa0587830:intron 50.0%
TTCTGCGTGTCGTATCTTGG+CGG + chr4_2:9727771-9727790 Msa0587830:intron 50.0%
TTTCCCTTGGACCGAATCCT+TGG + chr4_2:9730119-9730138 Msa0587830:intron 50.0%
! GTACTGATGGTTGTTGGAGC+AGG + chr4_2:9731293-9731312 Msa0587830:CDS 50.0%
TGTAATGATGCCCGCACAAG+AGG - chr4_2:9731326-9731345 None:intergenic 50.0%
TCTTGTGCGGGCATCATTAC+AGG + chr4_2:9731325-9731344 Msa0587830:CDS 50.0%
AAAACCTCTGGGCTCCATCA+AGG - chr4_2:9732363-9732382 None:intergenic 50.0%
!!! GCCCAGAGGTTTTTAAAGCC+GGG + chr4_2:9732370-9732389 Msa0587830:CDS 50.0%
!! CACCCGGCTTTAAAAACCTC+TGG - chr4_2:9732375-9732394 None:intergenic 50.0%
!!! CAGAGGTTTTTAAAGCCGGG+TGG + chr4_2:9732373-9732392 Msa0587830:CDS 50.0%
ACCCAAAACATGGGTACCAG+TGG - chr4_2:9732441-9732460 None:intergenic 50.0%
CAGAGGTTGGCACATATGAC+TGG + chr4_2:9732649-9732668 Msa0587830:intron 50.0%
ACTTCAACCTATGCCACAGC+TGG - chr4_2:9732689-9732708 None:intergenic 50.0%
! CTCGCTGAGGCTGATGTTTT+GGG + chr4_2:9732752-9732771 Msa0587830:intron 50.0%
!! GATGTTTTGGGCCTTGCATG+AGG + chr4_2:9732764-9732783 Msa0587830:intron 50.0%
AGAGTACACACCCTCATGCA+AGG - chr4_2:9732778-9732797 None:intergenic 50.0%
! ACTCGCTGAGGCTGATGTTT+TGG + chr4_2:9732820-9732839 Msa0587830:intron 50.0%
! CTCGCTGAGGCTGATGTTTT+GGG + chr4_2:9732752-9732771 Msa0587830:intron 50.0%
!! GATGTTTTGGGCCTTGCATG+AGG + chr4_2:9732764-9732783 Msa0587830:intron 50.0%
AGAGTACACACCCTCATGCA+AGG - chr4_2:9732778-9732797 None:intergenic 50.0%
! CGGATTGCATTTTGCCAAGG+CGG - chr4_2:9732953-9732972 None:intergenic 50.0%
CGCCTTGGCAAAATGCAATC+CGG + chr4_2:9732951-9732970 Msa0587830:intron 50.0%
! CTCCGGATTGCATTTTGCCA+AGG - chr4_2:9732956-9732975 None:intergenic 50.0%
! GCGAGAAACCTGGGTTTTCA+AGG - chr4_2:9733161-9733180 None:intergenic 50.0%
TGCAAGTCTGCGAGAAACCT+GGG - chr4_2:9733170-9733189 None:intergenic 50.0%
!! ACTTTGAAGCCGTCACTGGT+TGG - chr4_2:9733931-9733950 None:intergenic 50.0%
ACTGCACAGGAAGAAACGCA+CGG - chr4_2:9734131-9734150 None:intergenic 50.0%
! ATTGCGGACCCAGTGTCATT+TGG - chr4_2:9734353-9734372 None:intergenic 50.0%
AAATGACACTGGGTCCGCAA+TGG + chr4_2:9734352-9734371 Msa0587830:CDS 50.0%
TGTGCGTACTCCATGGTCAT+AGG + chr4_2:9734925-9734944 Msa0587830:intron 50.0%
GCCAGCAAATCCTATGACCA+TGG - chr4_2:9734938-9734957 None:intergenic 50.0%
CGCAAATAGGTGTCCAGAGA+GGG - chr4_2:9735416-9735435 None:intergenic 50.0%
ACGCAAATAGGTGTCCAGAG+AGG - chr4_2:9735417-9735436 None:intergenic 50.0%
!! GTAGATTTCTGGCGCTGTTG+CGG + chr4_2:9735459-9735478 Msa0587830:CDS 50.0%
!! TTGTGGATTGGAGACGGAGA+GGG - chr4_2:9735630-9735649 None:intergenic 50.0%
! ATGCCTCTAGGAGACAGAGG+AGG + chr4_2:9723814-9723833 Msa0587830:CDS 55.0%
TCACCTCCTCTGTCTCCTAG+AGG - chr4_2:9723820-9723839 None:intergenic 55.0%
! GTCGCTCCTTTTTGTGCGTG+TGG + chr4_2:9724519-9724538 Msa0587830:intron 55.0%
GCTTACTGACCACGCACACA+AGG - chr4_2:9725002-9725021 None:intergenic 55.0%
CTGTTGCTCCTTTGTGTGCG+TGG + chr4_2:9725465-9725484 Msa0587830:intron 55.0%
AGTCTGACCCAGCAAATGGC+GGG - chr4_2:9726312-9726331 None:intergenic 55.0%
! GCCATTTGCTGGGTCAGACT+TGG + chr4_2:9726312-9726331 Msa0587830:CDS 55.0%
! TGGTCTTAAGCCCATCCCAG+TGG + chr4_2:9726332-9726351 Msa0587830:CDS 55.0%
CAGATGTTGTGCCAAGCCGT+AGG + chr4_2:9727307-9727326 Msa0587830:intron 55.0%
TGTCTGCTTCCTTCCCCGAA+AGG + chr4_2:9727476-9727495 Msa0587830:CDS 55.0%
CAAGAGGTTCCTTTCGGGGA+AGG - chr4_2:9727488-9727507 None:intergenic 55.0%
GTTGTGGCTCAGGATTCCCT+TGG + chr4_2:9727664-9727683 Msa0587830:intron 55.0%
! GGATGCAAGCTCTGCCACTT+TGG + chr4_2:9727709-9727728 Msa0587830:CDS 55.0%
TCTGCGTGTCGTATCTTGGC+GGG + chr4_2:9727772-9727791 Msa0587830:intron 55.0%
AGGTCGACACCTGGGAAACA+TGG + chr4_2:9728084-9728103 Msa0587830:intron 55.0%
! ACATCTGATGGCGCTTGGAG+AGG - chr4_2:9728537-9728556 None:intergenic 55.0%
! TGGCCAAGGATTCGGTCCAA+GGG - chr4_2:9730125-9730144 None:intergenic 55.0%
! TTGGCCAAGGATTCGGTCCA+AGG - chr4_2:9730126-9730145 None:intergenic 55.0%
AGGCTTCGGAAGAAACTGGG+CGG + chr4_2:9731446-9731465 Msa0587830:intron 55.0%
TATGCCACAGCTGGTGGGAA+TGG - chr4_2:9732680-9732699 None:intergenic 55.0%
ATTCCCACCAGCTGTGGCAT+AGG + chr4_2:9732679-9732698 Msa0587830:intron 55.0%
CAACCTATGCCACAGCTGGT+GGG - chr4_2:9732685-9732704 None:intergenic 55.0%
TCAACCTATGCCACAGCTGG+TGG - chr4_2:9732686-9732705 None:intergenic 55.0%
CCAAAACATCAGCCTCAGCG+AGG - chr4_2:9732754-9732773 None:intergenic 55.0%
! CCTCGCTGAGGCTGATGTTT+TGG + chr4_2:9732751-9732770 Msa0587830:intron 55.0%
AAGGCGGCACAGCCAAGAAA+AGG - chr4_2:9732937-9732956 None:intergenic 55.0%
! TTTTCTTGGCTGTGCCGCCT+TGG + chr4_2:9732936-9732955 Msa0587830:intron 55.0%
GTGCAAGTCTGCGAGAAACC+TGG - chr4_2:9733171-9733190 None:intergenic 55.0%
CCATTGTTGTCTCCCAAGCG+TGG - chr4_2:9733739-9733758 None:intergenic 55.0%
CCACGCTTGGGAGACAACAA+TGG + chr4_2:9733736-9733755 Msa0587830:intron 55.0%
ACTGGGTCCGCAATGGTACA+TGG + chr4_2:9734359-9734378 Msa0587830:CDS 55.0%
GCGCTGTTGCGGTCCTAAAA+AGG + chr4_2:9735470-9735489 Msa0587830:CDS 55.0%
!! GTTGTGGATTGGAGACGGAG+AGG - chr4_2:9735631-9735650 None:intergenic 55.0%
! TTGGTGCTCCCTTGTGTGCG+TGG + chr4_2:9724990-9725009 Msa0587830:intron 60.0%
TCTGCTTCCCCGCCATTTGC+TGG + chr4_2:9726301-9726320 Msa0587830:CDS 60.0%
CTGCTTCCCCGCCATTTGCT+GGG + chr4_2:9726302-9726321 Msa0587830:CDS 60.0%
GTCTGACCCAGCAAATGGCG+GGG - chr4_2:9726311-9726330 None:intergenic 60.0%
TGCCATAGCGCTTCCTGTCG+TGG + chr4_2:9727284-9727303 Msa0587830:intron 60.0%
!! TGCCACGACAGGAAGCGCTA+TGG - chr4_2:9727289-9727308 None:intergenic 60.0%
GGCACAACATCTGCCACGAC+AGG - chr4_2:9727300-9727319 None:intergenic 60.0%
! TGATGGCGCTTGGAGAGGCA+TGG - chr4_2:9728532-9728551 None:intergenic 60.0%
ATGGTTGTTGGAGCAGGGCG+TGG + chr4_2:9731299-9731318 Msa0587830:CDS 60.0%
CTGTCTCCCGAGTGCCTTGA+TGG + chr4_2:9732346-9732365 Msa0587830:CDS 60.0%
! TGGGCTCCATCAAGGCACTC+GGG - chr4_2:9732355-9732374 None:intergenic 60.0%
! CTGGGCTCCATCAAGGCACT+CGG - chr4_2:9732356-9732375 None:intergenic 60.0%
AGTGCCTTGATGGAGCCCAG+AGG + chr4_2:9732356-9732375 Msa0587830:CDS 60.0%
! AGGCGTTGCAGCCTACGGCT+TGG - chr4_2:9727321-9727340 None:intergenic 65.0%
CAGGGCGTGGACCTCTTGTG+CGG + chr4_2:9731312-9731331 Msa0587830:CDS 65.0%
AGGGCGTGGACCTCTTGTGC+GGG + chr4_2:9731313-9731332 Msa0587830:CDS 65.0%
CCACAGCTGGTGGGAATGGC+AGG - chr4_2:9732676-9732695 None:intergenic 65.0%
CCTGCCATTCCCACCAGCTG+TGG + chr4_2:9732673-9732692 Msa0587830:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 9723704 9735878 9723704 ID=Msa0587830;Name=Msa0587830
chr4_2 mRNA 9723704 9735878 9723704 ID=Msa0587830-mRNA-1;Parent=Msa0587830;Name=Msa0587830-mRNA-1;_AED=0.11;_eAED=0.12;_QI=110|0.95|0.95|1|1|1|23|204|647
chr4_2 exon 9723704 9723951 9723704 ID=Msa0587830-mRNA-1:exon:2675;Parent=Msa0587830-mRNA-1
chr4_2 exon 9726253 9726370 9726253 ID=Msa0587830-mRNA-1:exon:2676;Parent=Msa0587830-mRNA-1
chr4_2 exon 9726851 9726960 9726851 ID=Msa0587830-mRNA-1:exon:2677;Parent=Msa0587830-mRNA-1
chr4_2 exon 9727473 9727562 9727473 ID=Msa0587830-mRNA-1:exon:2678;Parent=Msa0587830-mRNA-1
chr4_2 exon 9727665 9727730 9727665 ID=Msa0587830-mRNA-1:exon:2679;Parent=Msa0587830-mRNA-1
chr4_2 exon 9728086 9728165 9728086 ID=Msa0587830-mRNA-1:exon:2680;Parent=Msa0587830-mRNA-1
chr4_2 exon 9728329 9728404 9728329 ID=Msa0587830-mRNA-1:exon:2681;Parent=Msa0587830-mRNA-1
chr4_2 exon 9728502 9728588 9728502 ID=Msa0587830-mRNA-1:exon:2682;Parent=Msa0587830-mRNA-1
chr4_2 exon 9728809 9728884 9728809 ID=Msa0587830-mRNA-1:exon:2683;Parent=Msa0587830-mRNA-1
chr4_2 exon 9730182 9730273 9730182 ID=Msa0587830-mRNA-1:exon:2684;Parent=Msa0587830-mRNA-1
chr4_2 exon 9730355 9730390 9730355 ID=Msa0587830-mRNA-1:exon:2685;Parent=Msa0587830-mRNA-1
chr4_2 exon 9730491 9730559 9730491 ID=Msa0587830-mRNA-1:exon:2686;Parent=Msa0587830-mRNA-1
chr4_2 exon 9730906 9730974 9730906 ID=Msa0587830-mRNA-1:exon:2687;Parent=Msa0587830-mRNA-1
chr4_2 exon 9731293 9731346 9731293 ID=Msa0587830-mRNA-1:exon:2688;Parent=Msa0587830-mRNA-1
chr4_2 exon 9731448 9731522 9731448 ID=Msa0587830-mRNA-1:exon:2689;Parent=Msa0587830-mRNA-1
chr4_2 exon 9732133 9732225 9732133 ID=Msa0587830-mRNA-1:exon:2690;Parent=Msa0587830-mRNA-1
chr4_2 exon 9732310 9732413 9732310 ID=Msa0587830-mRNA-1:exon:2691;Parent=Msa0587830-mRNA-1
chr4_2 exon 9733913 9733970 9733913 ID=Msa0587830-mRNA-1:exon:2692;Parent=Msa0587830-mRNA-1
chr4_2 exon 9734043 9734129 9734043 ID=Msa0587830-mRNA-1:exon:2693;Parent=Msa0587830-mRNA-1
chr4_2 exon 9734272 9734380 9734272 ID=Msa0587830-mRNA-1:exon:2694;Parent=Msa0587830-mRNA-1
chr4_2 exon 9734947 9735034 9734947 ID=Msa0587830-mRNA-1:exon:2695;Parent=Msa0587830-mRNA-1
chr4_2 exon 9735398 9735491 9735398 ID=Msa0587830-mRNA-1:exon:2696;Parent=Msa0587830-mRNA-1
chr4_2 exon 9735600 9735878 9735600 ID=Msa0587830-mRNA-1:exon:2697;Parent=Msa0587830-mRNA-1
chr4_2 five_prime_UTR 9723704 9723813 9723704 ID=Msa0587830-mRNA-1:five_prime_utr;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9723814 9723951 9723814 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9726253 9726370 9726253 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9726851 9726960 9726851 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9727473 9727562 9727473 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9727665 9727730 9727665 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9728086 9728165 9728086 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9728329 9728404 9728329 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9728502 9728588 9728502 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9728809 9728884 9728809 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9730182 9730273 9730182 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9730355 9730390 9730355 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9730491 9730559 9730491 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9730906 9730974 9730906 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9731293 9731346 9731293 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9731448 9731522 9731448 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9732133 9732225 9732133 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9732310 9732413 9732310 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9733913 9733970 9733913 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9734043 9734129 9734043 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9734272 9734380 9734272 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9734947 9735034 9734947 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9735398 9735491 9735398 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 CDS 9735600 9735674 9735600 ID=Msa0587830-mRNA-1:cds;Parent=Msa0587830-mRNA-1
chr4_2 three_prime_UTR 9735675 9735878 9735675 ID=Msa0587830-mRNA-1:three_prime_utr;Parent=Msa0587830-mRNA-1
Gene Sequence

>Msa0587830

ATGCCTCTAGGAGACAGAGGAGGTGATAAGAGTGAAGCTCGATTTTGCGGTGTAGAAACAGAGTTCAGCGATGACATGCCTAATGTCATTACTTTCAATCTCTCCACTGGAAAATTTGATTTCGTTGTTGCTCCTCTCACGGATCCTTCCTATAGGCCAAGCTTAGTGCAAAAGGATAGTTTGGGATCTGCTTCCCCGCCATTTGCTGGGTCAGACTTGGTCTTAAGCCCATCCCAGTGGAGTAGTCATGTAGTTGGAAAAATTAGCTCATGGATTGATTTGGACTCGGAAGATGAGACCTTTAGAATAGATTCTGAAACTACTCTTAGACAAGAATTAGCCTGGGCTTCTCATCTCTCATTACAGGCGTGTCTGCTTCCTTCCCCGAAAGGAACCTCTTGTGCTAATTATGCACGGTGTGTGAATCAAATCTTACAGGACCTGAGTAATATGCAGTTGTGGCTCAGGATTCCCTTGGTTGTTCCCGATGATGACTCTATGGATGCAAGCTCTGCCACTTTGGTCGACACCTGGGAAACATGGAATTCATTTCGTCTAATGTGCGAGCATCACAGTCAACTGTCAGCTGCACTTGATATTCTGAGTACCCTGCCATCAGCAAATTCATTAGGACGGTGGTTTGGGGAGTCTGTTAGAGCAGCTATAGTAAATACGGATTCCTTTTTAACTAATGGTCGTGGATATCCATGCCTCTCCAAGCGCCATCAGATGTTGATTACTCGGTTTTTTAACCATAATATACAGATAATTATATCTGGAAATTCTGGTCATCCTAAAGCAAGTGTGGATGCAAATGATTTTCATAATCGATCTGTTGCGGATTCACAAAGACATCCCTTGCGTCTATATCTGGAATATGTTGGACATCTGTACCAAAAAATGGATCCTCTTCCTGAGCAAGAACGTTTTGAGCTGGGATATAGGGATTATTTACAATCACCTTTACAACCTTTGATGGATAATTTGGAGGCTCGTACCTATGAGACTTTTGAGAAAGATGCCATGAAATACATTCAGTACCAAAGAGCAGTAAGTAAAGCAATGCTAGACATGATTCCTGATGAAGAGGCATCTGTTAAAACCATTGTACTGATGGTTGTTGGAGCAGGGCGTGGACCTCTTGTGCGGGCATCATTACAGGCTTCGGAAGAAACTGGGCGGAAGCTAAAAGTTTATGCTGTTGAAAAGAATCCAAATGCAGTTGTGACCCTTCATGCATTAGTTAAACTAGAGGGATGGGAGGATACTGTTACTATAGTCTCAAGTGACATGCGCTATTGGAACGCCCCTGAAAAAGCTGATATCTTGGTTAGCGAATTGCTAGGTTCTTTTGGTGACAATGAACTGTCTCCCGAGTGCCTTGATGGAGCCCAGAGGTTTTTAAAGCCGGGTGGAATTTCAATACCATCTTCGTACACAAGTTTCATCCAACCAGTGACGGCTTCAAAGTTATATAATGATGTATATCCTGTTAAGGCACATAAAGATATTTCACACTTTGAAACTGCTTATGTTGTGAAAATACACAACGCAGCTCGACTTACACCATGTCAATCCGTTTTTACATTTACTCATCCAAAACCCGTTAATGATAGAGAAAGCAATCAACGCTATAAGAAGTTGCATTTTACAATACCAAATGACACTGGGTCCGCAATGGTACATGGATTTGCTGGCTACTTTGATGCCACTCTTTACAAGGATGTGCATCTTGGGATTGAACCTTCAACGGCTACACCAAACATGTTCAGCTGGTTTTCAATATTTTTCCCTCTCTGGACACCTATTTGCGTGAAACCAGGTTCAAAACTTGAAGTAGATTTCTGGCGCTGTTGCGGTCCTAAAAAGGTTTGGTATGAGTGGTGTGTTACATCTCCCTCTCCGTCTCCAATCCACAACAGTAATGACGGTCATACTGGGTAG

Protein sequence

>Msa0587830

MPLGDRGGDKSEARFCGVETEFSDDMPNVITFNLSTGKFDFVVAPLTDPSYRPSLVQKDSLGSASPPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDETFRIDSETTLRQELAWASHLSLQACLLPSPKGTSCANYARCVNQILQDLSNMQLWLRIPLVVPDDDSMDASSATLVDTWETWNSFRLMCEHHSQLSAALDILSTLPSANSLGRWFGESVRAAIVNTDSFLTNGRGYPCLSKRHQMLITRFFNHNIQIIISGNSGHPKASVDANDFHNRSVADSQRHPLRLYLEYVGHLYQKMDPLPEQERFELGYRDYLQSPLQPLMDNLEARTYETFEKDAMKYIQYQRAVSKAMLDMIPDEEASVKTIVLMVVGAGRGPLVRASLQASEETGRKLKVYAVEKNPNAVVTLHALVKLEGWEDTVTIVSSDMRYWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPGGISIPSSYTSFIQPVTASKLYNDVYPVKAHKDISHFETAYVVKIHNAARLTPCQSVFTFTHPKPVNDRESNQRYKKLHFTIPNDTGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFSIFFPLWTPICVKPGSKLEVDFWRCCGPKKVWYEWCVTSPSPSPIHNSNDGHTG*