Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603140 | XP_013456085.1 | 95.868 | 484 | 20 | 0 | 1 | 484 | 1 | 484 | 0.0 | 970 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603140 | sp|Q10137|SEC14_SCHPO | 26.966 | 267 | 171 | 7 | 155 | 400 | 2 | 265 | 1.03e-13 | 75.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028620 | Msa0603140 | 0.819131 | 1.364562e-52 | -8.615850e-47 |
| Msa0603140 | Msa0624060 | 0.808379 | 3.188666e-50 | -8.615850e-47 |
| Msa0603140 | Msa0644170 | 0.934836 | 2.177391e-96 | -8.615850e-47 |
| Msa0603140 | Msa0651560 | 0.807579 | 4.718308e-50 | -8.615850e-47 |
| Msa0603140 | Msa0676130 | 0.808948 | 2.409829e-50 | -8.615850e-47 |
| Msa0603140 | Msa0676180 | 0.816195 | 6.267731e-52 | -8.615850e-47 |
| Msa0603140 | Msa0683980 | 0.913036 | 9.797550e-84 | -8.615850e-47 |
| Msa0603140 | Msa0796250 | 0.817429 | 3.312804e-52 | -8.615850e-47 |
| Msa0603140 | Msa0837890 | 0.800234 | 1.586022e-48 | -8.615850e-47 |
| Msa0603140 | Msa0855870 | 0.809754 | 1.618365e-50 | -8.615850e-47 |
| Msa0603140 | Msa0899970 | 0.837468 | 5.106736e-57 | -8.615850e-47 |
| Msa0603140 | Msa0933760 | 0.800191 | 1.618445e-48 | -8.615850e-47 |
| Msa0603140 | Msa0965080 | 0.834931 | 2.253443e-56 | -8.615850e-47 |
| Msa0603140 | Msa0965290 | 0.847146 | 1.390734e-59 | -8.615850e-47 |
| Msa0603140 | Msa0999680 | 0.845303 | 4.417498e-59 | -8.615850e-47 |
| Msa0603140 | Msa1034500 | 0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0603140 | Msa1145810 | 0.800721 | 1.261815e-48 | -8.615850e-47 |
| Msa0603140 | Msa1222670 | 0.814035 | 1.891172e-51 | -8.615850e-47 |
| Msa0603140 | Msa1340200 | 0.809453 | 1.877973e-50 | -8.615850e-47 |
| Msa0603140 | Msa1378410 | 0.815025 | 1.142080e-51 | -8.615850e-47 |
| Msa0603140 | Msa1398370 | 0.803600 | 3.227092e-49 | -8.615850e-47 |
| Msa0603140 | Msa1463030 | 0.804989 | 1.657127e-49 | -8.615850e-47 |
| Msa0124320 | Msa0603140 | 0.817520 | 3.160591e-52 | -8.615850e-47 |
| Msa0189710 | Msa0603140 | 0.806489 | 8.022740e-50 | -8.615850e-47 |
| Msa0232090 | Msa0603140 | 0.802487 | 5.481351e-49 | -8.615850e-47 |
| Msa0428580 | Msa0603140 | 0.804642 | 1.958709e-49 | -8.615850e-47 |
| Msa0464390 | Msa0603140 | 0.803494 | 3.394475e-49 | -8.615850e-47 |
| Msa0474940 | Msa0603140 | 0.805288 | 1.435110e-49 | -8.615850e-47 |
| Msa0310090 | Msa0603140 | 0.801205 | 1.005030e-48 | -8.615850e-47 |
| Msa0548120 | Msa0603140 | 0.987019 | 9.021505e-169 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603140 | MtrunA17_Chr4g0031141 | 95.868 | 484 | 20 | 0 | 1 | 484 | 1 | 484 | 0.0 | 970 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0603140 | AT3G46450.1 | 50.308 | 487 | 231 | 5 | 1 | 482 | 1 | 481 | 4.67e-162 | 468 |
| Msa0603140 | AT3G46450.3 | 50.308 | 487 | 231 | 5 | 1 | 482 | 1 | 481 | 4.67e-162 | 468 |
| Msa0603140 | AT3G46450.2 | 49.495 | 495 | 231 | 6 | 1 | 482 | 1 | 489 | 6.56e-159 | 460 |
Find 145 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATAAGTATTATCGTATTT+TGG | 0.089032 | 4_2:-47277440 | Msa0603140:CDS |
| CAATAAAAGGTGTGTGTTTA+TGG | 0.148166 | 4_2:-47277226 | Msa0603140:three_prime_UTR |
| TGAATTGCCTTCGGTTTATA+TGG | 0.190483 | 4_2:-47282546 | Msa0603140:exon |
| AGGATTTGTCTTTGTGAATT+AGG | 0.190565 | 4_2:-47277313 | Msa0603140:three_prime_UTR |
| CACAAAACCAAATACCTTTC+TGG | 0.191441 | 4_2:+47279410 | None:intergenic |
| ACTAGGGAAGTAAACTAATT+TGG | 0.199029 | 4_2:+47277366 | None:intergenic |
| TTGCCTACCCACCATTTAAA+TGG | 0.217975 | 4_2:-47282235 | Msa0603140:CDS |
| ATGTGTGAATTGTTCTAAAA+TGG | 0.228006 | 4_2:-47277631 | Msa0603140:CDS |
| AACATCTAATATAGTTATTT+AGG | 0.231674 | 4_2:+47277153 | None:intergenic |
| TTCAAAAGTGGGCTGTGTTC+AGG | 0.251395 | 4_2:-47282211 | Msa0603140:CDS |
| TCAGTATCACAGGTAGAATA+TGG | 0.282203 | 4_2:-47278240 | Msa0603140:intron |
| TTGTGTCTGGCAAGGTCTGC+AGG | 0.284744 | 4_2:-47282270 | Msa0603140:CDS |
| CACAGCTCAGCTGCAATAAA+AGG | 0.287535 | 4_2:-47277239 | Msa0603140:three_prime_UTR |
| CCAGCAGCAGCAGAATTGTT+AGG | 0.345640 | 4_2:-47277572 | Msa0603140:CDS |
| ATATCTTTGTGCAAAGCCTT+TGG | 0.349948 | 4_2:+47282418 | None:intergenic |
| TTCATCTTTCTCCACAAATC+AGG | 0.350899 | 4_2:-47283465 | Msa0603140:intron |
| AGAGTGCAACCTCATGAAAC+TGG | 0.353698 | 4_2:-47277597 | Msa0603140:CDS |
| AGATAAAATATCTCTAGTTT+TGG | 0.358304 | 4_2:-47277266 | Msa0603140:three_prime_UTR |
| GTGGGCTGTGTTCAGGGGTT+TGG | 0.370104 | 4_2:-47282204 | Msa0603140:CDS |
| GCAATGGAAAGAACTAATAA+TGG | 0.372345 | 4_2:+47281583 | None:intergenic |
| GAGCAAATCGAGGTTTATCT+TGG | 0.375243 | 4_2:+47278420 | None:intergenic |
| TATCTTTGTGCAAAGCCTTT+GGG | 0.386982 | 4_2:+47282419 | None:intergenic |
| AATAAAAGGTGTGTGTTTAT+GGG | 0.388612 | 4_2:-47277225 | Msa0603140:three_prime_UTR |
| ACTACGTCTACATCCAACTA+TGG | 0.397066 | 4_2:-47277514 | Msa0603140:CDS |
| CCCTGTCTCATTGTAAGGCT+TGG | 0.403991 | 4_2:-47278467 | Msa0603140:CDS |
| TGTGGTCAAATATGGTGTTC+TGG | 0.416093 | 4_2:-47278514 | Msa0603140:CDS |
| AGATTACCTGAAGAAAAGTC+TGG | 0.416322 | 4_2:+47278031 | None:intergenic |
| AGAGTAGATGCCCTTGTGTC+TGG | 0.419220 | 4_2:-47282283 | Msa0603140:CDS |
| ACAGACCCTGTCTCATTGTA+AGG | 0.420449 | 4_2:-47278472 | Msa0603140:CDS |
| ATCTTGCAGAATGGAAGAAC+AGG | 0.423646 | 4_2:+47278119 | None:intergenic |
| GGTCATAGTTGTTGCTTTGA+CGG | 0.427086 | 4_2:+47277481 | None:intergenic |
| GTTGTCATAGCTCTTGGTGC+TGG | 0.427292 | 4_2:-47277417 | Msa0603140:CDS |
| TGCTGAACCGGCTCCTGTGC+AGG | 0.432616 | 4_2:-47281482 | Msa0603140:CDS |
| CAGAGAAACTGAATTGCCTT+CGG | 0.435592 | 4_2:-47282555 | Msa0603140:five_prime_UTR |
| TTCAGAAATATCTGCTGAAC+CGG | 0.436907 | 4_2:-47281494 | Msa0603140:CDS |
| TCAACACTGCCATCATATCT+TGG | 0.436939 | 4_2:-47277666 | Msa0603140:CDS |
| GCAATAACACGAGCAATTGC+TGG | 0.437422 | 4_2:+47278054 | None:intergenic |
| GCTGGAAATGTGGTCAAATA+TGG | 0.437920 | 4_2:-47278522 | Msa0603140:CDS |
| TCAAAAGTGGGCTGTGTTCA+GGG | 0.438998 | 4_2:-47282210 | Msa0603140:CDS |
| ACGAACCTGGTGTGTAAGAT+AGG | 0.440467 | 4_2:-47277389 | Msa0603140:exon |
| GAACATGCGTCAATTATAGA+TGG | 0.444032 | 4_2:+47277028 | None:intergenic |
| CTGTGCTCTTTACAGAATCA+TGG | 0.444767 | 4_2:-47277105 | Msa0603140:three_prime_UTR |
| GAATTGCCTTCGGTTTATAT+GGG | 0.445226 | 4_2:-47282545 | Msa0603140:exon |
| TGAAAAGTTAACCTGATTTG+TGG | 0.446302 | 4_2:+47283454 | None:intergenic |
| CCTAACAATTCTGCTGCTGC+TGG | 0.448203 | 4_2:+47277572 | None:intergenic |
| AACAAACAACCAAGACGATT+AGG | 0.448537 | 4_2:+47278090 | None:intergenic |
| CCTGTCTCATTGTAAGGCTT+GGG | 0.451557 | 4_2:-47278466 | Msa0603140:CDS |
| CCCTCAAATTACAGTATTGG+TGG | 0.455195 | 4_2:-47278190 | Msa0603140:CDS |
| CAGTATCACAGGTAGAATAT+GGG | 0.455947 | 4_2:-47278239 | Msa0603140:CDS |
| AAGGGATTAGTTTGCCAGAA+AGG | 0.456937 | 4_2:-47279424 | Msa0603140:intron |
| GACTTTGGAAGCAGTGCTGT+GGG | 0.461131 | 4_2:-47282365 | Msa0603140:CDS |
| TAAAACTTCAGGAGCTCTCT+CGG | 0.463316 | 4_2:+47279493 | None:intergenic |
| TTGTAGAGAACACCTCTAGT+AGG | 0.473771 | 4_2:-47277333 | Msa0603140:three_prime_UTR |
| TGCAGGATAATTTGAATACT+AGG | 0.474906 | 4_2:-47281465 | Msa0603140:intron |
| CCCAAGCCTTACAATGAGAC+AGG | 0.475196 | 4_2:+47278466 | None:intergenic |
| CATTTAAATGGATTCAAAAG+TGG | 0.478870 | 4_2:-47282223 | Msa0603140:CDS |
| AAATTATCCTGCACAGGAGC+CGG | 0.479392 | 4_2:+47281475 | None:intergenic |
| CCACCAATACTGTAATTTGA+GGG | 0.482481 | 4_2:+47278190 | None:intergenic |
| CGGTCATCTAATACCATAGT+TGG | 0.485418 | 4_2:+47277501 | None:intergenic |
| TTGCTGCTTTAGAAGCTGTA+AGG | 0.485821 | 4_2:-47282316 | Msa0603140:CDS |
| TCCACCAATACTGTAATTTG+AGG | 0.487804 | 4_2:+47278189 | None:intergenic |
| CTACAAATTTATTTCAACTA+GGG | 0.489309 | 4_2:+47277350 | None:intergenic |
| AAACCCTCAAATTACAGTAT+TGG | 0.490708 | 4_2:-47278193 | Msa0603140:CDS |
| AACGAAGAGCTGGAAAATCA+AGG | 0.492588 | 4_2:-47279443 | Msa0603140:CDS |
| GCGTATTGTCTTCTTGATTG+AGG | 0.494104 | 4_2:+47278580 | None:intergenic |
| AAACAAAACAGTGCTATCAC+TGG | 0.494792 | 4_2:-47282479 | Msa0603140:CDS |
| GATCACTTTCCTAATCGTCT+TGG | 0.495856 | 4_2:-47278099 | Msa0603140:CDS |
| TGTGTGAATTGTTCTAAAAT+GGG | 0.496722 | 4_2:-47277630 | Msa0603140:CDS |
| CAGCAGCAGCAGAATTGTTA+GGG | 0.497606 | 4_2:-47277571 | Msa0603140:CDS |
| TGTGTCTGGCAAGGTCTGCA+GGG | 0.502343 | 4_2:-47282269 | Msa0603140:CDS |
| ATTTGCATGGGAATTCTCAA+TGG | 0.503124 | 4_2:+47278150 | None:intergenic |
| AATTCTTACAGTAGAAGAGC+TGG | 0.508630 | 4_2:-47278540 | Msa0603140:CDS |
| GACTCAACTCAACGAAGAGC+TGG | 0.511333 | 4_2:-47279453 | Msa0603140:CDS |
| ATTTAAATGGATTCAAAAGT+GGG | 0.513377 | 4_2:-47282222 | Msa0603140:CDS |
| GATCTTTGCTTCAGTATCAC+AGG | 0.515027 | 4_2:-47278250 | Msa0603140:intron |
| AGCAAATCGAGGTTTATCTT+GGG | 0.515766 | 4_2:+47278421 | None:intergenic |
| AAAACTTCAGGAGCTCTCTC+GGG | 0.516604 | 4_2:+47279494 | None:intergenic |
| CAAGAAGACAATACGCTGGC+GGG | 0.519577 | 4_2:-47278573 | Msa0603140:CDS |
| TGTCTTTGTGAATTAGGAGG+TGG | 0.521353 | 4_2:-47277307 | Msa0603140:three_prime_UTR |
| TCTACAAATTTATTTCAACT+AGG | 0.523383 | 4_2:+47277349 | None:intergenic |
| TGCAGACCTTGCCAGACACA+AGG | 0.523801 | 4_2:+47282272 | None:intergenic |
| CACCATGCGTCAATGAAACA+AGG | 0.525789 | 4_2:+47282387 | None:intergenic |
| AGATAAACCTCGATTTGCTC+AGG | 0.528310 | 4_2:-47278417 | Msa0603140:CDS |
| ATTTAAATGGTGGGTAGGCA+AGG | 0.528331 | 4_2:+47282237 | None:intergenic |
| AACAGCCTTTACTGATGCAC+TGG | 0.530440 | 4_2:-47281560 | Msa0603140:CDS |
| TTGTCTTCTTGATTGAGGTA+AGG | 0.532061 | 4_2:+47278585 | None:intergenic |
| AATCCATTTAAATGGTGGGT+AGG | 0.532716 | 4_2:+47282232 | None:intergenic |
| TTTGAATCCATTTAAATGGT+GGG | 0.533081 | 4_2:+47282228 | None:intergenic |
| TCAAATATGGTGTTCTGGCA+TGG | 0.535129 | 4_2:-47278509 | Msa0603140:CDS |
| ACATTCCAGTGCATCAGTAA+AGG | 0.536622 | 4_2:+47281555 | None:intergenic |
| TCATTGACGCATGGTGACTT+TGG | 0.537854 | 4_2:-47282380 | Msa0603140:CDS |
| GTATTCAAATTATCCTGCAC+AGG | 0.542724 | 4_2:+47281469 | None:intergenic |
| ATGCGTCAATTATAGATGGC+TGG | 0.544307 | 4_2:+47277032 | None:intergenic |
| CTTCGGTTTATATGGGAGAG+AGG | 0.544472 | 4_2:-47282538 | Msa0603140:exon |
| ACAGGATCTCAGTATTTGCA+TGG | 0.546008 | 4_2:+47278137 | None:intergenic |
| GGGTTTGGTTAAAAGCATGC+AGG | 0.548426 | 4_2:-47282189 | Msa0603140:intron |
| CTGCTGGTCCCAGTTTCATG+AGG | 0.549096 | 4_2:+47277588 | None:intergenic |
| GTTATCTAGTAGTATCTACA+TGG | 0.551136 | 4_2:-47277133 | Msa0603140:three_prime_UTR |
| CAAAAGTGGGCTGTGTTCAG+GGG | 0.551310 | 4_2:-47282209 | Msa0603140:CDS |
| CATGATTCTGTAAAGAGCAC+AGG | 0.554370 | 4_2:+47277106 | None:intergenic |
| ATTTGTCTTTGTGAATTAGG+AGG | 0.559115 | 4_2:-47277310 | Msa0603140:three_prime_UTR |
| CTGGTTGCGTCGCGTCCCAA+AGG | 0.563821 | 4_2:-47282434 | Msa0603140:CDS |
| CAGCTGCCTCCAAGATATGA+TGG | 0.565306 | 4_2:+47277657 | None:intergenic |
| AGATGCCCTTGTGTCTGGCA+AGG | 0.565370 | 4_2:-47282278 | Msa0603140:CDS |
| TTCGGTTTATATGGGAGAGA+GGG | 0.566140 | 4_2:-47282537 | Msa0603140:exon |
| TTTAGTTGAAGTCGTTTAGA+CGG | 0.566521 | 4_2:+47283510 | None:intergenic |
| ATCAGTAAAGGCTGTTGCAA+TGG | 0.567300 | 4_2:+47281567 | None:intergenic |
| TGACTTTGGAAGCAGTGCTG+TGG | 0.568986 | 4_2:-47282366 | Msa0603140:CDS |
| GGTTTATATGGGAGAGAGGG+TGG | 0.571830 | 4_2:-47282534 | Msa0603140:exon |
| ACGAAGAGCTGGAAAATCAA+GGG | 0.572330 | 4_2:-47279442 | Msa0603140:CDS |
| TGTGAATTAGGAGGTGGCAA+TGG | 0.572346 | 4_2:-47277301 | Msa0603140:three_prime_UTR |
| CCCCTTGTTTCATTGACGCA+TGG | 0.577087 | 4_2:-47282389 | Msa0603140:CDS |
| AGGAAAGTGATCTTGCAGAA+TGG | 0.579301 | 4_2:+47278110 | None:intergenic |
| ACACTGCCATCATATCTTGG+AGG | 0.583075 | 4_2:-47277663 | Msa0603140:CDS |
| ACAGTATTGGTGGACTGTGA+AGG | 0.583388 | 4_2:-47278180 | Msa0603140:CDS |
| TGGGATAGCTTGCAGCACAT+TGG | 0.587085 | 4_2:-47278447 | Msa0603140:CDS |
| GATTACCTGAAGAAAAGTCT+GGG | 0.589318 | 4_2:+47278032 | None:intergenic |
| AACAAAACAGTGCTATCACT+GGG | 0.597539 | 4_2:-47282478 | Msa0603140:CDS |
| CTCTCTCCCATATAAACCGA+AGG | 0.598494 | 4_2:+47282539 | None:intergenic |
| TAGAAGCTGTGTAAAATCTG+TGG | 0.605768 | 4_2:+47278627 | None:intergenic |
| CAGGATCTCAGTATTTGCAT+GGG | 0.606115 | 4_2:+47278138 | None:intergenic |
| CAGTAGAAGAGCTGGAAATG+TGG | 0.608308 | 4_2:-47278532 | Msa0603140:CDS |
| TTTGGCCTATCTTACACACC+AGG | 0.609676 | 4_2:+47277384 | None:intergenic |
| AGAATTAGTAATATGATCTG+AGG | 0.616840 | 4_2:+47281522 | None:intergenic |
| TGACAGCGGTTCTCAACACC+TGG | 0.616965 | 4_2:+47277460 | None:intergenic |
| GAGTGCAACCTCATGAAACT+GGG | 0.622128 | 4_2:-47277596 | Msa0603140:CDS |
| CCAAGCCTTACAATGAGACA+GGG | 0.623318 | 4_2:+47278467 | None:intergenic |
| GTTGGATGTAGACGTAGTGA+TGG | 0.623773 | 4_2:+47277519 | None:intergenic |
| AGTATCACAGGTAGAATATG+GGG | 0.625550 | 4_2:-47278238 | Msa0603140:CDS |
| GGTGCTGGAGTATACGAACC+TGG | 0.628612 | 4_2:-47277402 | Msa0603140:CDS |
| GCAGACCTTGCCAGACACAA+GGG | 0.633261 | 4_2:+47282273 | None:intergenic |
| CTAATTGCCTGAGCAAATCG+AGG | 0.635399 | 4_2:+47278410 | None:intergenic |
| ACCATGCGTCAATGAAACAA+GGG | 0.635590 | 4_2:+47282388 | None:intergenic |
| CAGCAGCAGAATTGTTAGGG+AGG | 0.639469 | 4_2:-47277568 | Msa0603140:CDS |
| GATGCACTGGAATGTAGTGA+TGG | 0.651523 | 4_2:-47281547 | Msa0603140:CDS |
| ACAAAGACAAATCCTACTAG+AGG | 0.653155 | 4_2:+47277321 | None:intergenic |
| TCAAGAAGACAATACGCTGG+CGG | 0.653895 | 4_2:-47278574 | Msa0603140:CDS |
| TCAAAGCAACAACTATGACC+AGG | 0.665242 | 4_2:-47277478 | Msa0603140:CDS |
| TTATCTAGTAGTATCTACAT+GGG | 0.676689 | 4_2:-47277132 | Msa0603140:three_prime_UTR |
| ATTGTTCTAAAATGGGCAAG+CGG | 0.677673 | 4_2:-47277623 | Msa0603140:CDS |
| TACGATAATACTTATGACAG+CGG | 0.678800 | 4_2:+47277446 | None:intergenic |
| CCATGCGTCAATGAAACAAG+GGG | 0.685581 | 4_2:+47282389 | None:intergenic |
| CAATCAAGAAGACAATACGC+TGG | 0.698783 | 4_2:-47278577 | Msa0603140:CDS |
| ACTTTGGAAGCAGTGCTGTG+GGG | 0.718142 | 4_2:-47282364 | Msa0603140:CDS |
| GGATGATATCAGTGACAACG+AGG | 0.724876 | 4_2:-47277547 | Msa0603140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGTAATTTTTTTAATTCA+TGG | - | chr4_2:47277262-47277281 | Msa0603140:three_prime_UTR | 10.0% |
| !!! | ATCATTGAATATTTTTTTTT+GGG | - | chr4_2:47281759-47281778 | Msa0603140:intron | 10.0% |
| !! | AAGTTTGATGAATAATTATT+GGG | + | chr4_2:47277179-47277198 | None:intergenic | 15.0% |
| !! | TAAGTTTGATGAATAATTAT+TGG | + | chr4_2:47277180-47277199 | None:intergenic | 15.0% |
| !! | AATAATTATTCATCAAACTT+AGG | - | chr4_2:47277179-47277198 | Msa0603140:three_prime_UTR | 15.0% |
| !!! | ATTTAACAAGTTTTAGAAAT+TGG | - | chr4_2:47278558-47278577 | Msa0603140:CDS | 15.0% |
| !! | AAAATTATCATCTTTATGTT+TGG | - | chr4_2:47279455-47279474 | Msa0603140:CDS | 15.0% |
| !!! | AAGTTTTAGAATATGAAAAA+TGG | - | chr4_2:47281113-47281132 | Msa0603140:intron | 15.0% |
| !!! | AATCATTTTTTAGTTTTTGT+TGG | - | chr4_2:47281291-47281310 | Msa0603140:intron | 15.0% |
| !! | AAAAAAAAGGTAAATATTGT+TGG | + | chr4_2:47281482-47281501 | None:intergenic | 15.0% |
| !! | AACATTAAATAAAATCACTT+AGG | - | chr4_2:47281661-47281680 | Msa0603140:intron | 15.0% |
| !!! | GATCATTGAATATTTTTTTT+TGG | - | chr4_2:47281758-47281777 | Msa0603140:intron | 15.0% |
| !! | AACATCTAATATAGTTATTT+AGG | + | chr4_2:47283441-47283460 | None:intergenic | 15.0% |
| !!! | ATTTAAATGGATTCAAAAGT+GGG | - | chr4_2:47278369-47278388 | Msa0603140:intron | 20.0% |
| !!! | TCAAGTTATTATTAACCTTT+TGG | - | chr4_2:47279265-47279284 | Msa0603140:intron | 20.0% |
| !! | ATAGCAAATATGTTAAATGT+GGG | + | chr4_2:47279382-47279401 | None:intergenic | 20.0% |
| !! | AATAGCAAATATGTTAAATG+TGG | + | chr4_2:47279383-47279402 | None:intergenic | 20.0% |
| !! | ATTAAAAAGTAAGTGTAGTT+AGG | - | chr4_2:47279830-47279849 | Msa0603140:intron | 20.0% |
| !! | TTATTTACATATGACATTTG+TGG | - | chr4_2:47280278-47280297 | Msa0603140:intron | 20.0% |
| !! | ATGTCAATATATATATTCCT+TGG | - | chr4_2:47280355-47280374 | Msa0603140:intron | 20.0% |
| !! | TGTCAATATATATATTCCTT+GGG | - | chr4_2:47280356-47280375 | Msa0603140:intron | 20.0% |
| !!! | TAATTTGAAACAATTGTTAC+CGG | - | chr4_2:47280465-47280484 | Msa0603140:intron | 20.0% |
| !! | GGCATATATCTAATTTATAT+GGG | + | chr4_2:47280640-47280659 | None:intergenic | 20.0% |
| !! | AGGCATATATCTAATTTATA+TGG | + | chr4_2:47280641-47280660 | None:intergenic | 20.0% |
| !!! | TTTAGATTTAGTGTTGAATT+AGG | - | chr4_2:47280702-47280721 | Msa0603140:intron | 20.0% |
| !! | ACTAGAACATAAACAAATAT+GGG | + | chr4_2:47280784-47280803 | None:intergenic | 20.0% |
| !! | AACTAGAACATAAACAAATA+TGG | + | chr4_2:47280785-47280804 | None:intergenic | 20.0% |
| !!! | TTTTCATATTCTAAAACTTC+AGG | + | chr4_2:47281112-47281131 | None:intergenic | 20.0% |
| !! | TCTATTTCAAACTAATCTAT+TGG | - | chr4_2:47281252-47281271 | Msa0603140:intron | 20.0% |
| !!! | ACCTTTGATTTGTTAATTAA+TGG | - | chr4_2:47281542-47281561 | Msa0603140:CDS | 20.0% |
| !! | ACCATTAATTAACAAATCAA+AGG | + | chr4_2:47281546-47281565 | None:intergenic | 20.0% |
| !! | ATATTTACTTGCATATTTCT+TGG | - | chr4_2:47281879-47281898 | Msa0603140:intron | 20.0% |
| !!! | CTATTTTCTTTGTTGTTTTA+GGG | + | chr4_2:47282603-47282622 | None:intergenic | 20.0% |
| !!! | AATGCAATTTTAATTATCCT+AGG | - | chr4_2:47282723-47282742 | Msa0603140:intron | 20.0% |
| !!! | ATGCAATTTTAATTATCCTA+GGG | - | chr4_2:47282724-47282743 | Msa0603140:intron | 20.0% |
| !!! | TTTAAAGAAAGCACAAATTT+TGG | + | chr4_2:47282801-47282820 | None:intergenic | 20.0% |
| !!! | ATTTTAAGCATTTGAATCAT+AGG | - | chr4_2:47282828-47282847 | Msa0603140:intron | 20.0% |
| !! | AAGAAAAAGTTAAAGATAGA+AGG | - | chr4_2:47282868-47282887 | Msa0603140:intron | 20.0% |
| !!! | TCATAAGTATTATCGTATTT+TGG | - | chr4_2:47283151-47283170 | Msa0603140:intron | 20.0% |
| !!! | CATAAGTATTATCGTATTTT+GGG | - | chr4_2:47283152-47283171 | Msa0603140:intron | 20.0% |
| !! | CTACAAATTTATTTCAACTA+GGG | + | chr4_2:47283244-47283263 | None:intergenic | 20.0% |
| !! | TCTACAAATTTATTTCAACT+AGG | + | chr4_2:47283245-47283264 | None:intergenic | 20.0% |
| !!! | AGATAAAATATCTCTAGTTT+TGG | - | chr4_2:47283325-47283344 | Msa0603140:intron | 20.0% |
| !!! | TTAGTTTGTACAATTCACTA+TGG | - | chr4_2:47277288-47277307 | Msa0603140:three_prime_UTR | 25.0% |
| !! | CAGATTTTGTATGCAATTTT+CGG | - | chr4_2:47277554-47277573 | Msa0603140:CDS | 25.0% |
| !! | AAAGGATGTTTTGTGTAATT+TGG | - | chr4_2:47277643-47277662 | Msa0603140:CDS | 25.0% |
| !! | AAGGATGTTTTGTGTAATTT+GGG | - | chr4_2:47277644-47277663 | Msa0603140:CDS | 25.0% |
| ! | TGATAAGCGCTTATATTATA+AGG | - | chr4_2:47277894-47277913 | Msa0603140:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | - | chr4_2:47277923-47277942 | Msa0603140:intron | 25.0% |
| ! | TTTGAATCCATTTAAATGGT+GGG | + | chr4_2:47278366-47278385 | None:intergenic | 25.0% |
| !! | TTTTGAATCCATTTAAATGG+TGG | + | chr4_2:47278367-47278386 | None:intergenic | 25.0% |
| !! | CACTTTTGAATCCATTTAAA+TGG | + | chr4_2:47278370-47278389 | None:intergenic | 25.0% |
| !! | CATTTAAATGGATTCAAAAG+TGG | - | chr4_2:47278368-47278387 | Msa0603140:intron | 25.0% |
| ! | ATTCAGTTACATAGCAAAAA+TGG | + | chr4_2:47278515-47278534 | None:intergenic | 25.0% |
| ! | TTAACCTTTACAGAAAAAAG+GGG | + | chr4_2:47278844-47278863 | None:intergenic | 25.0% |
| ! | CTTAACCTTTACAGAAAAAA+GGG | + | chr4_2:47278845-47278864 | None:intergenic | 25.0% |
| ! | AGAATTAGTAATATGATCTG+AGG | + | chr4_2:47279072-47279091 | None:intergenic | 25.0% |
| ! | AATACTAGGTATATGATTTG+AGG | - | chr4_2:47279140-47279159 | Msa0603140:intron | 25.0% |
| ! | ATACTAGGTATATGATTTGA+GGG | - | chr4_2:47279141-47279160 | Msa0603140:intron | 25.0% |
| ! | AGCTAACTTTACCAATTAAA+TGG | + | chr4_2:47279319-47279338 | None:intergenic | 25.0% |
| ! | ATTACACTTAAGTTTCTGTT+TGG | - | chr4_2:47279400-47279419 | Msa0603140:intron | 25.0% |
| ! | TTTAGTGATCTTAGAGTTAA+TGG | - | chr4_2:47279432-47279451 | Msa0603140:CDS | 25.0% |
| ! | ACAAAGAAAATTCAGAAACA+GGG | + | chr4_2:47279515-47279534 | None:intergenic | 25.0% |
| ! | TACAAAGAAAATTCAGAAAC+AGG | + | chr4_2:47279516-47279535 | None:intergenic | 25.0% |
| ! | ATTTCTCAAATGTTCTTTCA+TGG | + | chr4_2:47279561-47279580 | None:intergenic | 25.0% |
| ! | ATTCAAGAGAAATAATAGCT+AGG | - | chr4_2:47279651-47279670 | Msa0603140:intron | 25.0% |
| !! | TTAGATTTTGCACAATTTCA+TGG | + | chr4_2:47279963-47279982 | None:intergenic | 25.0% |
| ! | TTAATTGATGTTCGAATTGT+AGG | + | chr4_2:47280146-47280165 | None:intergenic | 25.0% |
| ! | ACTGAAAAAAACATCTATTG+TGG | - | chr4_2:47280246-47280265 | Msa0603140:intron | 25.0% |
| ! | AACACTAAATCTAAATCAAG+AGG | + | chr4_2:47280697-47280716 | None:intergenic | 25.0% |
| ! | TTTGATACCATCTTAGAATT+TGG | + | chr4_2:47280734-47280753 | None:intergenic | 25.0% |
| ! | TGAAAATCACTTTATTCAAG+AGG | + | chr4_2:47281023-47281042 | None:intergenic | 25.0% |
| !! | TATCATGTTATAGCATTTTC+CGG | + | chr4_2:47281222-47281241 | None:intergenic | 25.0% |
| ! | ACAGACGACTAAAAAAAAAA+AGG | + | chr4_2:47281495-47281514 | None:intergenic | 25.0% |
| ! | TATGCTATTGCTATCTAATA+AGG | + | chr4_2:47281862-47281881 | None:intergenic | 25.0% |
| ! | TAAATATTCAGTAGACAGAT+GGG | + | chr4_2:47282265-47282284 | None:intergenic | 25.0% |
| ! | ATTGGTTACTCATTAAACTA+AGG | + | chr4_2:47282321-47282340 | None:intergenic | 25.0% |
| !!! | TTTTAGGGTGAATAAATGAA+GGG | + | chr4_2:47282588-47282607 | None:intergenic | 25.0% |
| !!! | GCTATTTTCTTTGTTGTTTT+AGG | + | chr4_2:47282604-47282623 | None:intergenic | 25.0% |
| ! | AACAAAGAAAATAGCAAAGA+GGG | - | chr4_2:47282609-47282628 | Msa0603140:intron | 25.0% |
| !!! | TGCAATTTTAATTATCCTAG+GGG | - | chr4_2:47282725-47282744 | Msa0603140:intron | 25.0% |
| !!! | TTTAACTTTTTCTTAGTAGC+TGG | + | chr4_2:47282862-47282881 | None:intergenic | 25.0% |
| !!! | ATGTGTGAATTGTTCTAAAA+TGG | - | chr4_2:47282960-47282979 | Msa0603140:intron | 25.0% |
| !!! | TGTGTGAATTGTTCTAAAAT+GGG | - | chr4_2:47282961-47282980 | Msa0603140:intron | 25.0% |
| !! | AATAAAAGGTGTGTGTTTAT+GGG | - | chr4_2:47283366-47283385 | Msa0603140:intron | 25.0% |
| ! | TTATCTAGTAGTATCTACAT+GGG | - | chr4_2:47283459-47283478 | Msa0603140:intron | 25.0% |
| ! | CGAAGAATGAATCATTTTGT+TGG | - | chr4_2:47277053-47277072 | Msa0603140:three_prime_UTR | 30.0% |
| TTTAGTTGAAGTCGTTTAGA+CGG | + | chr4_2:47277084-47277103 | None:intergenic | 30.0% | |
| ! | TGAAAAGTTAACCTGATTTG+TGG | + | chr4_2:47277140-47277159 | None:intergenic | 30.0% |
| ! | TTGGAATCTTTGTGATTTGT+CGG | - | chr4_2:47277508-47277527 | Msa0603140:CDS | 30.0% |
| ! | CAGTTTGAAATCTTGTTTAG+TGG | - | chr4_2:47277594-47277613 | Msa0603140:CDS | 30.0% |
| ! | TGAAATCTTGTTTAGTGGTT+AGG | - | chr4_2:47277599-47277618 | Msa0603140:CDS | 30.0% |
| GTGGAATGTTGTAGTTTAAA+AGG | - | chr4_2:47277625-47277644 | Msa0603140:CDS | 30.0% | |
| ! | AGGATGTTTTGTGTAATTTG+GGG | - | chr4_2:47277645-47277664 | Msa0603140:CDS | 30.0% |
| ! | GCTTATTTGAGTTCACTTAT+TGG | - | chr4_2:47277681-47277700 | Msa0603140:CDS | 30.0% |
| AAGTTCTCAAAGATAGCTTA+TGG | - | chr4_2:47277787-47277806 | Msa0603140:intron | 30.0% | |
| AAAACTATCTATGCCATGTT+TGG | + | chr4_2:47277939-47277958 | None:intergenic | 30.0% | |
| AAAAACGTACAAAAAACAGC+TGG | - | chr4_2:47278138-47278157 | Msa0603140:CDS | 30.0% | |
| GCTATGTAACTGAATTATCT+TGG | - | chr4_2:47278520-47278539 | Msa0603140:CDS | 30.0% | |
| AGATTTATGTTCCCTTTCTA+TGG | - | chr4_2:47278727-47278746 | Msa0603140:intron | 30.0% | |
| CCTTAACCTTTACAGAAAAA+AGG | + | chr4_2:47278846-47278865 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTCTGTAAAGGTTA+AGG | - | chr4_2:47278843-47278862 | Msa0603140:intron | 30.0% |
| TCACGTATATAGCAGAATTT+GGG | + | chr4_2:47278945-47278964 | None:intergenic | 30.0% | |
| TTCACGTATATAGCAGAATT+TGG | + | chr4_2:47278946-47278965 | None:intergenic | 30.0% | |
| GCAATGGAAAGAACTAATAA+TGG | + | chr4_2:47279011-47279030 | None:intergenic | 30.0% | |
| TGCAGGATAATTTGAATACT+AGG | - | chr4_2:47279126-47279145 | Msa0603140:intron | 30.0% | |
| CTACTAATCACATCATAACA+AGG | + | chr4_2:47279185-47279204 | None:intergenic | 30.0% | |
| CAATTAAATGGTCCTCAATT+AGG | + | chr4_2:47279307-47279326 | None:intergenic | 30.0% | |
| CTAATTGAGGACCATTTAAT+TGG | - | chr4_2:47279305-47279324 | Msa0603140:intron | 30.0% | |
| TTATCATCTTTATGTTTGGC+AGG | - | chr4_2:47279459-47279478 | Msa0603140:CDS | 30.0% | |
| ACAGGGATAATTAGAAACAT+AGG | + | chr4_2:47279498-47279517 | None:intergenic | 30.0% | |
| TTAACTCTCAAGTATATAGC+TGG | + | chr4_2:47279711-47279730 | None:intergenic | 30.0% | |
| GTCTGAACTATGACAAAATT+TGG | - | chr4_2:47279744-47279763 | Msa0603140:intron | 30.0% | |
| AGACTTCTCTATTACAACAT+TGG | - | chr4_2:47279853-47279872 | Msa0603140:intron | 30.0% | |
| ! | ATTTTGCACAATTTCATGGA+TGG | + | chr4_2:47279959-47279978 | None:intergenic | 30.0% |
| TGTAACCAGAATTTCGAAAA+TGG | + | chr4_2:47280207-47280226 | None:intergenic | 30.0% | |
| ! | ATTTGTGGTCTGTTCTTTTT+GGG | - | chr4_2:47280293-47280312 | Msa0603140:intron | 30.0% |
| ! | TCAACATTCTACAGTACTTT+TGG | + | chr4_2:47280510-47280529 | None:intergenic | 30.0% |
| !! | AGTTTTGTAAAGACTATCTC+AGG | + | chr4_2:47280661-47280680 | None:intergenic | 30.0% |
| GAGATAGTCTTTACAAAACT+TGG | - | chr4_2:47280661-47280680 | Msa0603140:intron | 30.0% | |
| TAAATCTAAATCAAGAGGTG+AGG | + | chr4_2:47280692-47280711 | None:intergenic | 30.0% | |
| GCTATATTACTAGTTGAAGT+CGG | + | chr4_2:47280897-47280916 | None:intergenic | 30.0% | |
| TATAGCTAAAGCTGTCTATA+AGG | - | chr4_2:47280911-47280930 | Msa0603140:intron | 30.0% | |
| TAAAGCTGTCTATAAGGATT+GGG | - | chr4_2:47280917-47280936 | Msa0603140:intron | 30.0% | |
| AAGTTCTTTGAATTTGTGCT+AGG | + | chr4_2:47280983-47281002 | None:intergenic | 30.0% | |
| !!! | TGTGCATAATTTTGCTATTC+CGG | - | chr4_2:47281200-47281219 | Msa0603140:intron | 30.0% |
| CTAAAGTGAATTACTCACTT+TGG | - | chr4_2:47281587-47281606 | Msa0603140:CDS | 30.0% | |
| ACATATTCAATTGTGAGATC+CGG | + | chr4_2:47281618-47281637 | None:intergenic | 30.0% | |
| AAATATTCAGTAGACAGATG+GGG | + | chr4_2:47282264-47282283 | None:intergenic | 30.0% | |
| GTAAATATTCAGTAGACAGA+TGG | + | chr4_2:47282266-47282285 | None:intergenic | 30.0% | |
| AAACCCTCAAATTACAGTAT+TGG | - | chr4_2:47282398-47282417 | Msa0603140:CDS | 30.0% | |
| !!! | GTTTTAGGGTGAATAAATGA+AGG | + | chr4_2:47282589-47282608 | None:intergenic | 30.0% |
| CAACAAAGAAAATAGCAAAG+AGG | - | chr4_2:47282608-47282627 | Msa0603140:intron | 30.0% | |
| TCTCAGTCAATAAAAAAACG+AGG | - | chr4_2:47282639-47282658 | Msa0603140:intron | 30.0% | |
| CTCAGTCAATAAAAAAACGA+GGG | - | chr4_2:47282640-47282659 | Msa0603140:intron | 30.0% | |
| TACGATAATACTTATGACAG+CGG | + | chr4_2:47283148-47283167 | None:intergenic | 30.0% | |
| ACTAGGGAAGTAAACTAATT+TGG | + | chr4_2:47283228-47283247 | None:intergenic | 30.0% | |
| AGGATTTGTCTTTGTGAATT+AGG | - | chr4_2:47283278-47283297 | Msa0603140:intron | 30.0% | |
| ATTTGTCTTTGTGAATTAGG+AGG | - | chr4_2:47283281-47283300 | Msa0603140:intron | 30.0% | |
| ! | CAATAAAAGGTGTGTGTTTA+TGG | - | chr4_2:47283365-47283384 | Msa0603140:intron | 30.0% |
| GTTATCTAGTAGTATCTACA+TGG | - | chr4_2:47283458-47283477 | Msa0603140:intron | 30.0% | |
| TTCATCTTTCTCCACAAATC+AGG | - | chr4_2:47277126-47277145 | Msa0603140:three_prime_UTR | 35.0% | |
| CAACGTATCAGTATCATATC+TGG | + | chr4_2:47277400-47277419 | None:intergenic | 35.0% | |
| TTGATATGATACGTCGAAAG+CGG | - | chr4_2:47277417-47277436 | Msa0603140:CDS | 35.0% | |
| ATTCCAAAAGCCTTGACATT+GGG | + | chr4_2:47277495-47277514 | None:intergenic | 35.0% | |
| ! | TGGAATCTTTGTGATTTGTC+GGG | - | chr4_2:47277509-47277528 | Msa0603140:CDS | 35.0% |
| ATTTGTCGGGATTACATTTG+CGG | - | chr4_2:47277522-47277541 | Msa0603140:CDS | 35.0% | |
| TTGTTTAGTGGTTAGGATAG+TGG | - | chr4_2:47277606-47277625 | Msa0603140:CDS | 35.0% | |
| ACTTATTGGCATAAGCACTT+AGG | - | chr4_2:47277695-47277714 | Msa0603140:CDS | 35.0% | |
| CTTATTGGCATAAGCACTTA+GGG | - | chr4_2:47277696-47277715 | Msa0603140:CDS | 35.0% | |
| TTATTGGCATAAGCACTTAG+GGG | - | chr4_2:47277697-47277716 | Msa0603140:CDS | 35.0% | |
| !! | GGTCTGGTTGTTTTCTTATT+TGG | - | chr4_2:47277718-47277737 | Msa0603140:CDS | 35.0% |
| TGAATTGCCTTCGGTTTATA+TGG | - | chr4_2:47278045-47278064 | Msa0603140:CDS | 35.0% | |
| GAATTGCCTTCGGTTTATAT+GGG | - | chr4_2:47278046-47278065 | Msa0603140:CDS | 35.0% | |
| AAACAAAACAGTGCTATCAC+TGG | - | chr4_2:47278112-47278131 | Msa0603140:CDS | 35.0% | |
| AACAAAACAGTGCTATCACT+GGG | - | chr4_2:47278113-47278132 | Msa0603140:CDS | 35.0% | |
| TATCTTTGTGCAAAGCCTTT+GGG | + | chr4_2:47278175-47278194 | None:intergenic | 35.0% | |
| ATATCTTTGTGCAAAGCCTT+TGG | + | chr4_2:47278176-47278195 | None:intergenic | 35.0% | |
| !! | AATCCATTTAAATGGTGGGT+AGG | + | chr4_2:47278362-47278381 | None:intergenic | 35.0% |
| ATCTACCAAGTCCATAGAAA+GGG | + | chr4_2:47278741-47278760 | None:intergenic | 35.0% | |
| AATCTACCAAGTCCATAGAA+AGG | + | chr4_2:47278742-47278761 | None:intergenic | 35.0% | |
| TTTCTGTAAAGGTTAAGGAG+CGG | - | chr4_2:47278848-47278867 | Msa0603140:intron | 35.0% | |
| TGCTATATACGTGAAGCATA+TGG | - | chr4_2:47278951-47278970 | Msa0603140:intron | 35.0% | |
| TTAATACTCTCTCTTCTACC+AGG | - | chr4_2:47278974-47278993 | Msa0603140:intron | 35.0% | |
| ! | ATAATGGTCTTGATAGTACC+TGG | + | chr4_2:47278995-47279014 | None:intergenic | 35.0% |
| TTCAGAAATATCTGCTGAAC+CGG | - | chr4_2:47279097-47279116 | Msa0603140:intron | 35.0% | |
| GTATTCAAATTATCCTGCAC+AGG | + | chr4_2:47279125-47279144 | None:intergenic | 35.0% | |
| !!! | TTATTAACCTTTTGGCTCAG+AGG | - | chr4_2:47279273-47279292 | Msa0603140:intron | 35.0% |
| !!! | TATTAACCTTTTGGCTCAGA+GGG | - | chr4_2:47279274-47279293 | Msa0603140:intron | 35.0% |
| CATAGTTCAGACTTCAGTTT+AGG | + | chr4_2:47279736-47279755 | None:intergenic | 35.0% | |
| !! | TTAGTGCCTTATTTCCAACT+TGG | - | chr4_2:47280043-47280062 | Msa0603140:intron | 35.0% |
| TTGATGTTCGAATTGTAGGT+AGG | + | chr4_2:47280142-47280161 | None:intergenic | 35.0% | |
| AATGAAAAGACTGTGTAGTC+TGG | - | chr4_2:47280167-47280186 | Msa0603140:intron | 35.0% | |
| ! | TGTGTAGTCTGGTTTATTCA+TGG | - | chr4_2:47280178-47280197 | Msa0603140:intron | 35.0% |
| ! | CATTTGTGGTCTGTTCTTTT+TGG | - | chr4_2:47280292-47280311 | Msa0603140:intron | 35.0% |
| ATCATTCATGTTGAAACCCA+AGG | + | chr4_2:47280375-47280394 | None:intergenic | 35.0% | |
| ! | TTTGAAACAATTGTTACCGG+AGG | - | chr4_2:47280468-47280487 | Msa0603140:intron | 35.0% |
| TTGAAACAATTGTTACCGGA+GGG | - | chr4_2:47280469-47280488 | Msa0603140:intron | 35.0% | |
| TTATTGAGCCGATAATGTAC+AGG | - | chr4_2:47280533-47280552 | Msa0603140:intron | 35.0% | |
| TATTGAGCCGATAATGTACA+GGG | - | chr4_2:47280534-47280553 | Msa0603140:intron | 35.0% | |
| ! | GTTGAGTCCAAATTCTAAGA+TGG | - | chr4_2:47280724-47280743 | Msa0603140:intron | 35.0% |
| TCTATCCAAGACCTGTTATT+GGG | - | chr4_2:47280755-47280774 | Msa0603140:intron | 35.0% | |
| CTAAAGCTGTCTATAAGGAT+TGG | - | chr4_2:47280916-47280935 | Msa0603140:intron | 35.0% | |
| AAACCCAAAAACCAGATCAA+GGG | + | chr4_2:47280952-47280971 | None:intergenic | 35.0% | |
| !! | TAGTTTGCCAGAAAGGTATT+TGG | - | chr4_2:47281174-47281193 | Msa0603140:intron | 35.0% |
| CACAAAACCAAATACCTTTC+TGG | + | chr4_2:47281184-47281203 | None:intergenic | 35.0% | |
| TTGTTTCCAAACAATGAGAC+AGG | + | chr4_2:47281332-47281351 | None:intergenic | 35.0% | |
| !!! | AGTTGCTTTTCACAATTGAG+CGG | - | chr4_2:47281391-47281410 | Msa0603140:intron | 35.0% |
| AAGTGAATTACTCACTTTGG+AGG | - | chr4_2:47281590-47281609 | Msa0603140:CDS | 35.0% | |
| TTGAGCGAGTTTCAAAATCT+TGG | - | chr4_2:47281827-47281846 | Msa0603140:intron | 35.0% | |
| AGTTTCAAAATCTTGGTCAG+AGG | - | chr4_2:47281834-47281853 | Msa0603140:intron | 35.0% | |
| TAGAAGCTGTGTAAAATCTG+TGG | + | chr4_2:47281967-47281986 | None:intergenic | 35.0% | |
| TTGTCTTCTTGATTGAGGTA+AGG | + | chr4_2:47282009-47282028 | None:intergenic | 35.0% | |
| AATTCTTACAGTAGAAGAGC+TGG | - | chr4_2:47282051-47282070 | Msa0603140:intron | 35.0% | |
| AGCAAATCGAGGTTTATCTT+GGG | + | chr4_2:47282173-47282192 | None:intergenic | 35.0% | |
| AAAGCAAACATGAGAACTAG+TGG | + | chr4_2:47282226-47282245 | None:intergenic | 35.0% | |
| GATACTGAAGCAAAGATCAT+TGG | + | chr4_2:47282339-47282358 | None:intergenic | 35.0% | |
| TCAGTATCACAGGTAGAATA+TGG | - | chr4_2:47282351-47282370 | Msa0603140:CDS | 35.0% | |
| CAGTATCACAGGTAGAATAT+GGG | - | chr4_2:47282352-47282371 | Msa0603140:CDS | 35.0% | |
| AGTATCACAGGTAGAATATG+GGG | - | chr4_2:47282353-47282372 | Msa0603140:CDS | 35.0% | |
| CCACCAATACTGTAATTTGA+GGG | + | chr4_2:47282404-47282423 | None:intergenic | 35.0% | |
| TCCACCAATACTGTAATTTG+AGG | + | chr4_2:47282405-47282424 | None:intergenic | 35.0% | |
| ATTTGCATGGGAATTCTCAA+TGG | + | chr4_2:47282444-47282463 | None:intergenic | 35.0% | |
| AACAAACAACCAAGACGATT+AGG | + | chr4_2:47282504-47282523 | None:intergenic | 35.0% | |
| GATTACCTGAAGAAAAGTCT+GGG | + | chr4_2:47282562-47282581 | None:intergenic | 35.0% | |
| AGATTACCTGAAGAAAAGTC+TGG | + | chr4_2:47282563-47282582 | None:intergenic | 35.0% | |
| GTTGTTGATCATGAAGTACA+CGG | - | chr4_2:47282677-47282696 | Msa0603140:intron | 35.0% | |
| !! | ATTGTTCTAAAATGGGCAAG+CGG | - | chr4_2:47282968-47282987 | Msa0603140:intron | 35.0% |
| ACAAAGACAAATCCTACTAG+AGG | + | chr4_2:47283273-47283292 | None:intergenic | 35.0% | |
| GAACATGCGTCAATTATAGA+TGG | + | chr4_2:47283566-47283585 | None:intergenic | 35.0% | |
| GATTCCAAAAGCCTTGACAT+TGG | + | chr4_2:47277496-47277515 | None:intergenic | 40.0% | |
| CAGAGAAACTGAATTGCCTT+CGG | - | chr4_2:47278036-47278055 | Msa0603140:intron | 40.0% | |
| TTCGGTTTATATGGGAGAGA+GGG | - | chr4_2:47278054-47278073 | Msa0603140:CDS | 40.0% | |
| ACCATGCGTCAATGAAACAA+GGG | + | chr4_2:47278206-47278225 | None:intergenic | 40.0% | |
| !! | TTGCTGCTTTAGAAGCTGTA+AGG | - | chr4_2:47278275-47278294 | Msa0603140:intron | 40.0% |
| !! | ATTTAAATGGTGGGTAGGCA+AGG | + | chr4_2:47278357-47278376 | None:intergenic | 40.0% |
| TTGCCTACCCACCATTTAAA+TGG | - | chr4_2:47278356-47278375 | Msa0603140:intron | 40.0% | |
| CATCGATGTTTGTGTACTTC+TGG | - | chr4_2:47278588-47278607 | Msa0603140:CDS | 40.0% | |
| ! | TTGTTCCACGACGTTTTATG+TGG | - | chr4_2:47278618-47278637 | Msa0603140:CDS | 40.0% |
| ! | TGTTCCACGACGTTTTATGT+GGG | - | chr4_2:47278619-47278638 | Msa0603140:CDS | 40.0% |
| ATGTTCCCTTTCTATGGACT+TGG | - | chr4_2:47278733-47278752 | Msa0603140:intron | 40.0% | |
| !!! | GTAGCCCCTTTTTTCTGTAA+AGG | - | chr4_2:47278837-47278856 | Msa0603140:intron | 40.0% |
| ATCAGTAAAGGCTGTTGCAA+TGG | + | chr4_2:47279027-47279046 | None:intergenic | 40.0% | |
| ACATTCCAGTGCATCAGTAA+AGG | + | chr4_2:47279039-47279058 | None:intergenic | 40.0% | |
| AAATAACCCTCTGAGCCAAA+AGG | + | chr4_2:47279283-47279302 | None:intergenic | 40.0% | |
| GAGGGTTATTTGCCTAATTG+AGG | - | chr4_2:47279292-47279311 | Msa0603140:intron | 40.0% | |
| GTTAAATGTGGGATCATCCA+GGG | + | chr4_2:47279371-47279390 | None:intergenic | 40.0% | |
| TGTTAAATGTGGGATCATCC+AGG | + | chr4_2:47279372-47279391 | None:intergenic | 40.0% | |
| ATGTTTGGCAGGTTTCTTTC+TGG | - | chr4_2:47279470-47279489 | Msa0603140:CDS | 40.0% | |
| GTTAGTAGTCGTTAGTAGTC+TGG | - | chr4_2:47279913-47279932 | Msa0603140:intron | 40.0% | |
| ! | TTGTAGAAACTGGTTCAGTG+TGG | + | chr4_2:47280003-47280022 | None:intergenic | 40.0% |
| CAAGAAGACGTTGTAGAAAC+TGG | + | chr4_2:47280013-47280032 | None:intergenic | 40.0% | |
| ! | AGTGCACCAAGTTGGAAATA+AGG | + | chr4_2:47280052-47280071 | None:intergenic | 40.0% |
| ! | GGCTTCCATTTTCGAAATTC+TGG | - | chr4_2:47280199-47280218 | Msa0603140:intron | 40.0% |
| CAACCAACATGCTCAGAAAA+CGG | + | chr4_2:47280319-47280338 | None:intergenic | 40.0% | |
| TAACAAGCACCAACATCGAA+AGG | + | chr4_2:47280581-47280600 | None:intergenic | 40.0% | |
| GTCTATCCAAGACCTGTTAT+TGG | - | chr4_2:47280754-47280773 | Msa0603140:intron | 40.0% | |
| AATATGGGTGACCCAATAAC+AGG | + | chr4_2:47280769-47280788 | None:intergenic | 40.0% | |
| ! | GTTCTAGTTGACTTAGTCCT+AGG | - | chr4_2:47280796-47280815 | Msa0603140:intron | 40.0% |
| AAAACCAGATCAAGGGATGA+GGG | + | chr4_2:47280945-47280964 | None:intergenic | 40.0% | |
| AAAAACCAGATCAAGGGATG+AGG | + | chr4_2:47280946-47280965 | None:intergenic | 40.0% | |
| !!! | TCATCCCTTGATCTGGTTTT+TGG | - | chr4_2:47280945-47280964 | Msa0603140:intron | 40.0% |
| !!! | CATCCCTTGATCTGGTTTTT+GGG | - | chr4_2:47280946-47280965 | Msa0603140:intron | 40.0% |
| CAAACCCAAAAACCAGATCA+AGG | + | chr4_2:47280953-47280972 | None:intergenic | 40.0% | |
| !!! | CTGGTTTTTGGGTTTGAGTT+AGG | - | chr4_2:47280957-47280976 | Msa0603140:intron | 40.0% |
| TAAAACTTCAGGAGCTCTCT+CGG | + | chr4_2:47281101-47281120 | None:intergenic | 40.0% | |
| AACGAAGAGCTGGAAAATCA+AGG | - | chr4_2:47281148-47281167 | Msa0603140:intron | 40.0% | |
| ACGAAGAGCTGGAAAATCAA+GGG | - | chr4_2:47281149-47281168 | Msa0603140:intron | 40.0% | |
| !! | AAGGGATTAGTTTGCCAGAA+AGG | - | chr4_2:47281167-47281186 | Msa0603140:intron | 40.0% |
| TCTACTCCTGTCTCATTGTT+TGG | - | chr4_2:47281323-47281342 | Msa0603140:intron | 40.0% | |
| TTAGAGAGTAAAGCGAGCAA+AGG | + | chr4_2:47281571-47281590 | None:intergenic | 40.0% | |
| CACTTTATTCATCCCCAACT+CGG | - | chr4_2:47281707-47281726 | Msa0603140:intron | 40.0% | |
| ACTTTATTCATCCCCAACTC+GGG | - | chr4_2:47281708-47281727 | Msa0603140:intron | 40.0% | |
| AAGTACTTAATCCCCGAGTT+GGG | + | chr4_2:47281723-47281742 | None:intergenic | 40.0% | |
| TAAGTACTTAATCCCCGAGT+TGG | + | chr4_2:47281724-47281743 | None:intergenic | 40.0% | |
| GCACAAACACCACTAAATCA+TGG | + | chr4_2:47281924-47281943 | None:intergenic | 40.0% | |
| GCGTATTGTCTTCTTGATTG+AGG | + | chr4_2:47282014-47282033 | None:intergenic | 40.0% | |
| CAATCAAGAAGACAATACGC+TGG | - | chr4_2:47282014-47282033 | Msa0603140:intron | 40.0% | |
| GCTGGAAATGTGGTCAAATA+TGG | - | chr4_2:47282069-47282088 | Msa0603140:intron | 40.0% | |
| TGTGGTCAAATATGGTGTTC+TGG | - | chr4_2:47282077-47282096 | Msa0603140:intron | 40.0% | |
| TCAAATATGGTGTTCTGGCA+TGG | - | chr4_2:47282082-47282101 | Msa0603140:intron | 40.0% | |
| GAGCAAATCGAGGTTTATCT+TGG | + | chr4_2:47282174-47282193 | None:intergenic | 40.0% | |
| ! | AGATAAACCTCGATTTGCTC+AGG | - | chr4_2:47282174-47282193 | Msa0603140:intron | 40.0% |
| GATCTTTGCTTCAGTATCAC+AGG | - | chr4_2:47282341-47282360 | Msa0603140:CDS | 40.0% | |
| ! | CCCTCAAATTACAGTATTGG+TGG | - | chr4_2:47282401-47282420 | Msa0603140:CDS | 40.0% |
| CAGGATCTCAGTATTTGCAT+GGG | + | chr4_2:47282456-47282475 | None:intergenic | 40.0% | |
| ACAGGATCTCAGTATTTGCA+TGG | + | chr4_2:47282457-47282476 | None:intergenic | 40.0% | |
| ATCTTGCAGAATGGAAGAAC+AGG | + | chr4_2:47282475-47282494 | None:intergenic | 40.0% | |
| AGGAAAGTGATCTTGCAGAA+TGG | + | chr4_2:47282484-47282503 | None:intergenic | 40.0% | |
| GATCACTTTCCTAATCGTCT+TGG | - | chr4_2:47282492-47282511 | Msa0603140:CDS | 40.0% | |
| ! | TATTGCCCAGACTTTTCTTC+AGG | - | chr4_2:47282554-47282573 | Msa0603140:five_prime_UTR | 40.0% |
| ATAAACGTGTTGCACAGACA+AGG | + | chr4_2:47282774-47282793 | None:intergenic | 40.0% | |
| TCAACACTGCCATCATATCT+TGG | - | chr4_2:47282925-47282944 | Msa0603140:intron | 40.0% | |
| ACTACGTCTACATCCAACTA+TGG | - | chr4_2:47283077-47283096 | Msa0603140:intron | 40.0% | |
| CGGTCATCTAATACCATAGT+TGG | + | chr4_2:47283093-47283112 | None:intergenic | 40.0% | |
| !! | GGTCATAGTTGTTGCTTTGA+CGG | + | chr4_2:47283113-47283132 | None:intergenic | 40.0% |
| TCAAAGCAACAACTATGACC+AGG | - | chr4_2:47283113-47283132 | Msa0603140:intron | 40.0% | |
| !!! | TTTTGGGTTGTCATAGCTCT+TGG | - | chr4_2:47283168-47283187 | Msa0603140:intron | 40.0% |
| TTGTAGAGAACACCTCTAGT+AGG | - | chr4_2:47283258-47283277 | Msa0603140:intron | 40.0% | |
| TGTCTTTGTGAATTAGGAGG+TGG | - | chr4_2:47283284-47283303 | Msa0603140:intron | 40.0% | |
| ! | CATGATTCTGTAAAGAGCAC+AGG | + | chr4_2:47283488-47283507 | None:intergenic | 40.0% |
| CTGTGCTCTTTACAGAATCA+TGG | - | chr4_2:47283486-47283505 | Msa0603140:five_prime_UTR | 40.0% | |
| ATGCGTCAATTATAGATGGC+TGG | + | chr4_2:47283562-47283581 | None:intergenic | 40.0% | |
| CGATTTGTGTCCCAATGTCA+AGG | - | chr4_2:47277482-47277501 | Msa0603140:CDS | 45.0% | |
| ! | TGTCCCAATGTCAAGGCTTT+TGG | - | chr4_2:47277489-47277508 | Msa0603140:CDS | 45.0% |
| ! | TGTGTAATTTGGGGTCTGCT+TGG | - | chr4_2:47277654-47277673 | Msa0603140:CDS | 45.0% |
| ! | AATTTGGGGTCTGCTTGGAT+TGG | - | chr4_2:47277659-47277678 | Msa0603140:CDS | 45.0% |
| CTCTCTCCCATATAAACCGA+AGG | + | chr4_2:47278055-47278074 | None:intergenic | 45.0% | |
| CTTCGGTTTATATGGGAGAG+AGG | - | chr4_2:47278053-47278072 | Msa0603140:CDS | 45.0% | |
| CCATGCGTCAATGAAACAAG+GGG | + | chr4_2:47278205-47278224 | None:intergenic | 45.0% | |
| CACCATGCGTCAATGAAACA+AGG | + | chr4_2:47278207-47278226 | None:intergenic | 45.0% | |
| TCATTGACGCATGGTGACTT+TGG | - | chr4_2:47278211-47278230 | Msa0603140:CDS | 45.0% | |
| !! | TTCAAAAGTGGGCTGTGTTC+AGG | - | chr4_2:47278380-47278399 | Msa0603140:intron | 45.0% |
| !! | TCAAAAGTGGGCTGTGTTCA+GGG | - | chr4_2:47278381-47278400 | Msa0603140:intron | 45.0% |
| ! | GGGTTTGGTTAAAAGCATGC+AGG | - | chr4_2:47278402-47278421 | Msa0603140:intron | 45.0% |
| GTAACCCACATAAAACGTCG+TGG | + | chr4_2:47278626-47278645 | None:intergenic | 45.0% | |
| AAAGGTTAAGGAGCGGAGAA+CGG | - | chr4_2:47278855-47278874 | Msa0603140:intron | 45.0% | |
| AACAGCCTTTACTGATGCAC+TGG | - | chr4_2:47279031-47279050 | Msa0603140:intron | 45.0% | |
| GATGCACTGGAATGTAGTGA+TGG | - | chr4_2:47279044-47279063 | Msa0603140:intron | 45.0% | |
| AAATTATCCTGCACAGGAGC+CGG | + | chr4_2:47279119-47279138 | None:intergenic | 45.0% | |
| GATATGCAACAACCAAACCC+TGG | - | chr4_2:47279351-47279370 | Msa0603140:intron | 45.0% | |
| AGTAGTCGTTAGTAGTCTGG+TGG | - | chr4_2:47279916-47279935 | Msa0603140:intron | 45.0% | |
| CTGGTTCAGTGTGGTACAAT+CGG | + | chr4_2:47279994-47280013 | None:intergenic | 45.0% | |
| ! | AGAGTCTAGCAGAGTCTTGT+TGG | - | chr4_2:47280083-47280102 | Msa0603140:intron | 45.0% |
| ACAAATGCATAAGAGCCCTC+CGG | + | chr4_2:47280487-47280506 | None:intergenic | 45.0% | |
| !! | GAAAGGCTACGGTTGATTTG+GGG | + | chr4_2:47280564-47280583 | None:intergenic | 45.0% |
| ! | CGAAAGGCTACGGTTGATTT+GGG | + | chr4_2:47280565-47280584 | None:intergenic | 45.0% |
| TCGAAAGGCTACGGTTGATT+TGG | + | chr4_2:47280566-47280585 | None:intergenic | 45.0% | |
| TTGACTTAGTCCTAGGCATG+AGG | - | chr4_2:47280803-47280822 | Msa0603140:intron | 45.0% | |
| TGACTTAGTCCTAGGCATGA+GGG | - | chr4_2:47280804-47280823 | Msa0603140:intron | 45.0% | |
| TCTCAAAACACACACAGGAC+TGG | + | chr4_2:47280873-47280892 | None:intergenic | 45.0% | |
| TCGGATCTCAAAACACACAC+AGG | + | chr4_2:47280878-47280897 | None:intergenic | 45.0% | |
| AAAACTTCAGGAGCTCTCTC+GGG | + | chr4_2:47281100-47281119 | None:intergenic | 45.0% | |
| ! | AGTCGTCTGTACGCTCTTTT+TGG | - | chr4_2:47281505-47281524 | Msa0603140:CDS | 45.0% |
| ! | ATTACTCACTTTGGAGGAGC+CGG | - | chr4_2:47281596-47281615 | Msa0603140:CDS | 45.0% |
| CTTTATTCATCCCCAACTCG+GGG | - | chr4_2:47281709-47281728 | Msa0603140:intron | 45.0% | |
| AGTACTTAATCCCCGAGTTG+GGG | + | chr4_2:47281722-47281741 | None:intergenic | 45.0% | |
| CTTGGTTTCTTCTGTTGCAG+TGG | - | chr4_2:47281897-47281916 | Msa0603140:intron | 45.0% | |
| TGCAGTGGACCATGATTTAG+TGG | - | chr4_2:47281912-47281931 | Msa0603140:intron | 45.0% | |
| TCAAGAAGACAATACGCTGG+CGG | - | chr4_2:47282017-47282036 | Msa0603140:intron | 45.0% | |
| CAGTAGAAGAGCTGGAAATG+TGG | - | chr4_2:47282059-47282078 | Msa0603140:intron | 45.0% | |
| ACAGACCCTGTCTCATTGTA+AGG | - | chr4_2:47282119-47282138 | Msa0603140:intron | 45.0% | |
| CCAAGCCTTACAATGAGACA+GGG | + | chr4_2:47282127-47282146 | None:intergenic | 45.0% | |
| CCTGTCTCATTGTAAGGCTT+GGG | - | chr4_2:47282125-47282144 | Msa0603140:intron | 45.0% | |
| CTAATTGCCTGAGCAAATCG+AGG | + | chr4_2:47282184-47282203 | None:intergenic | 45.0% | |
| !! | ACAGTATTGGTGGACTGTGA+AGG | - | chr4_2:47282411-47282430 | Msa0603140:CDS | 45.0% |
| GCAATAACACGAGCAATTGC+TGG | + | chr4_2:47282540-47282559 | None:intergenic | 45.0% | |
| TCAATATTTGATGCGCCCCT+AGG | + | chr4_2:47282743-47282762 | None:intergenic | 45.0% | |
| GGGCGCATCAAATATTGAAG+AGG | - | chr4_2:47282745-47282764 | Msa0603140:intron | 45.0% | |
| ACACTGCCATCATATCTTGG+AGG | - | chr4_2:47282928-47282947 | Msa0603140:intron | 45.0% | |
| AGAGTGCAACCTCATGAAAC+TGG | - | chr4_2:47282994-47283013 | Msa0603140:intron | 45.0% | |
| GAGTGCAACCTCATGAAACT+GGG | - | chr4_2:47282995-47283014 | Msa0603140:intron | 45.0% | |
| CAGCAGCAGCAGAATTGTTA+GGG | - | chr4_2:47283020-47283039 | Msa0603140:intron | 45.0% | |
| GGATGATATCAGTGACAACG+AGG | - | chr4_2:47283044-47283063 | Msa0603140:intron | 45.0% | |
| GTTGGATGTAGACGTAGTGA+TGG | + | chr4_2:47283075-47283094 | None:intergenic | 45.0% | |
| ACGAACCTGGTGTGTAAGAT+AGG | - | chr4_2:47283202-47283221 | Msa0603140:intron | 45.0% | |
| TTTGGCCTATCTTACACACC+AGG | + | chr4_2:47283210-47283229 | None:intergenic | 45.0% | |
| TGTGAATTAGGAGGTGGCAA+TGG | - | chr4_2:47283290-47283309 | Msa0603140:intron | 45.0% | |
| CACAGCTCAGCTGCAATAAA+AGG | - | chr4_2:47283352-47283371 | Msa0603140:intron | 45.0% | |
| !!! | TTTTTTTTTTTTTATAAGAT+TGG | + | chr4_2:47280432-47280451 | None:intergenic | 5.0% |
| GGTTTATATGGGAGAGAGGG+TGG | - | chr4_2:47278057-47278076 | Msa0603140:CDS | 50.0% | |
| ! | CCCCTTGTTTCATTGACGCA+TGG | - | chr4_2:47278202-47278221 | Msa0603140:CDS | 50.0% |
| ! | TGACTTTGGAAGCAGTGCTG+TGG | - | chr4_2:47278225-47278244 | Msa0603140:CDS | 50.0% |
| ! | GACTTTGGAAGCAGTGCTGT+GGG | - | chr4_2:47278226-47278245 | Msa0603140:CDS | 50.0% |
| ! | ACTTTGGAAGCAGTGCTGTG+GGG | - | chr4_2:47278227-47278246 | Msa0603140:CDS | 50.0% |
| AGAGTAGATGCCCTTGTGTC+TGG | - | chr4_2:47278308-47278327 | Msa0603140:intron | 50.0% | |
| !! | CAAAAGTGGGCTGTGTTCAG+GGG | - | chr4_2:47278382-47278401 | Msa0603140:intron | 50.0% |
| ATGTGGGATCATCCAGGGTT+TGG | + | chr4_2:47279366-47279385 | None:intergenic | 50.0% | |
| GAGTCAGCACTTGCATCAGT+TGG | + | chr4_2:47279789-47279808 | None:intergenic | 50.0% | |
| !! | TCCAACTTGGTGCACTTTGC+AGG | - | chr4_2:47280056-47280075 | Msa0603140:intron | 50.0% |
| TCCTGCAAAGTGCACCAAGT+TGG | + | chr4_2:47280060-47280079 | None:intergenic | 50.0% | |
| GGGTCAGCCCTGTACATTAT+CGG | + | chr4_2:47280544-47280563 | None:intergenic | 50.0% | |
| CAACCGTAGCCTTTCGATGT+TGG | - | chr4_2:47280569-47280588 | Msa0603140:intron | 50.0% | |
| GCACCAACATCGAAAGGCTA+CGG | + | chr4_2:47280575-47280594 | None:intergenic | 50.0% | |
| GGTGACCCAATAACAGGTCT+TGG | + | chr4_2:47280763-47280782 | None:intergenic | 50.0% | |
| GACTTAGTCCTAGGCATGAG+GGG | - | chr4_2:47280805-47280824 | Msa0603140:intron | 50.0% | |
| AGAGCGTGGAAAATAGCAGG+TGG | + | chr4_2:47280844-47280863 | None:intergenic | 50.0% | |
| CGTAGAGCGTGGAAAATAGC+AGG | + | chr4_2:47280847-47280866 | None:intergenic | 50.0% | |
| !! | TCTCGGGTTGACTGCGAAAA+AGG | + | chr4_2:47281084-47281103 | None:intergenic | 50.0% |
| GACTCAACTCAACGAAGAGC+TGG | - | chr4_2:47281138-47281157 | Msa0603140:intron | 50.0% | |
| CAAGAAGACAATACGCTGGC+GGG | - | chr4_2:47282018-47282037 | Msa0603140:intron | 50.0% | |
| CCCTGTCTCATTGTAAGGCT+TGG | - | chr4_2:47282124-47282143 | Msa0603140:intron | 50.0% | |
| CCCAAGCCTTACAATGAGAC+AGG | + | chr4_2:47282128-47282147 | None:intergenic | 50.0% | |
| ! | TGGGATAGCTTGCAGCACAT+TGG | - | chr4_2:47282144-47282163 | Msa0603140:intron | 50.0% |
| CAGCTGCCTCCAAGATATGA+TGG | + | chr4_2:47282937-47282956 | None:intergenic | 50.0% | |
| CCTAACAATTCTGCTGCTGC+TGG | + | chr4_2:47283022-47283041 | None:intergenic | 50.0% | |
| CCAGCAGCAGCAGAATTGTT+AGG | - | chr4_2:47283019-47283038 | Msa0603140:intron | 50.0% | |
| CAGCAGCAGAATTGTTAGGG+AGG | - | chr4_2:47283023-47283042 | Msa0603140:intron | 50.0% | |
| ! | GTTGTCATAGCTCTTGGTGC+TGG | - | chr4_2:47283174-47283193 | Msa0603140:intron | 50.0% |
| GGCATAAGCACTTAGGGGTC+TGG | - | chr4_2:47277702-47277721 | Msa0603140:CDS | 55.0% | |
| AGATGCCCTTGTGTCTGGCA+AGG | - | chr4_2:47278313-47278332 | Msa0603140:intron | 55.0% | |
| GCAGACCTTGCCAGACACAA+GGG | + | chr4_2:47278321-47278340 | None:intergenic | 55.0% | |
| TGCAGACCTTGCCAGACACA+AGG | + | chr4_2:47278322-47278341 | None:intergenic | 55.0% | |
| TTGTGTCTGGCAAGGTCTGC+AGG | - | chr4_2:47278321-47278340 | Msa0603140:intron | 55.0% | |
| TGTGTCTGGCAAGGTCTGCA+GGG | - | chr4_2:47278322-47278341 | Msa0603140:intron | 55.0% | |
| !! | GGGCCGTTTTCTGAGCATGT+TGG | - | chr4_2:47280313-47280332 | Msa0603140:intron | 55.0% |
| !! | GCATGAGGGGTGTTCTCGTT+TGG | - | chr4_2:47280818-47280837 | Msa0603140:intron | 55.0% |
| GGAACCCTCATCCCTTGATC+TGG | - | chr4_2:47280938-47280957 | Msa0603140:intron | 55.0% | |
| CTGCTGGTCCCAGTTTCATG+AGG | + | chr4_2:47283006-47283025 | None:intergenic | 55.0% | |
| TGACAGCGGTTCTCAACACC+TGG | + | chr4_2:47283134-47283153 | None:intergenic | 55.0% | |
| ! | GGTGCTGGAGTATACGAACC+TGG | - | chr4_2:47283189-47283208 | Msa0603140:intron | 55.0% |
| ! | GTGGGCTGTGTTCAGGGGTT+TGG | - | chr4_2:47278387-47278406 | Msa0603140:intron | 60.0% |
| CGAGAACACCCCTCATGCCT+AGG | + | chr4_2:47280816-47280835 | None:intergenic | 60.0% | |
| AGGACTGGACACGTAGAGCG+TGG | + | chr4_2:47280858-47280877 | None:intergenic | 60.0% | |
| CTGGTTGCGTCGCGTCCCAA+AGG | - | chr4_2:47278157-47278176 | Msa0603140:CDS | 65.0% | |
| ! | TGCTGAACCGGCTCCTGTGC+AGG | - | chr4_2:47279109-47279128 | Msa0603140:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 47277011 | 47283602 | 47277011 | ID=Msa0603140;Name=Msa0603140 |
| chr4_2 | mRNA | 47277011 | 47283602 | 47277011 | ID=Msa0603140-mRNA-1;Parent=Msa0603140;Name=Msa0603140-mRNA-1;_AED=0.11;_eAED=0.11;_QI=162|1|1|1|0.83|0.71|7|384|484 |
| chr4_2 | exon | 47277011 | 47277763 | 47277011 | ID=Msa0603140-mRNA-1:exon:10783;Parent=Msa0603140-mRNA-1 |
| chr4_2 | exon | 47278038 | 47278258 | 47278038 | ID=Msa0603140-mRNA-1:exon:10782;Parent=Msa0603140-mRNA-1 |
| chr4_2 | exon | 47278411 | 47278667 | 47278411 | ID=Msa0603140-mRNA-1:exon:10781;Parent=Msa0603140-mRNA-1 |
| chr4_2 | exon | 47279425 | 47279520 | 47279425 | ID=Msa0603140-mRNA-1:exon:10780;Parent=Msa0603140-mRNA-1 |
| chr4_2 | exon | 47281466 | 47281617 | 47281466 | ID=Msa0603140-mRNA-1:exon:10779;Parent=Msa0603140-mRNA-1 |
| chr4_2 | exon | 47282190 | 47282574 | 47282190 | ID=Msa0603140-mRNA-1:exon:10778;Parent=Msa0603140-mRNA-1 |
| chr4_2 | exon | 47283466 | 47283602 | 47283466 | ID=Msa0603140-mRNA-1:exon:10777;Parent=Msa0603140-mRNA-1 |
| chr4_2 | five_prime_UTR | 47283466 | 47283602 | 47283466 | ID=Msa0603140-mRNA-1:five_prime_utr;Parent=Msa0603140-mRNA-1 |
| chr4_2 | five_prime_UTR | 47282550 | 47282574 | 47282550 | ID=Msa0603140-mRNA-1:five_prime_utr;Parent=Msa0603140-mRNA-1 |
| chr4_2 | CDS | 47282190 | 47282549 | 47282190 | ID=Msa0603140-mRNA-1:cds;Parent=Msa0603140-mRNA-1 |
| chr4_2 | CDS | 47281466 | 47281617 | 47281466 | ID=Msa0603140-mRNA-1:cds;Parent=Msa0603140-mRNA-1 |
| chr4_2 | CDS | 47279425 | 47279520 | 47279425 | ID=Msa0603140-mRNA-1:cds;Parent=Msa0603140-mRNA-1 |
| chr4_2 | CDS | 47278411 | 47278667 | 47278411 | ID=Msa0603140-mRNA-1:cds;Parent=Msa0603140-mRNA-1 |
| chr4_2 | CDS | 47278038 | 47278258 | 47278038 | ID=Msa0603140-mRNA-1:cds;Parent=Msa0603140-mRNA-1 |
| chr4_2 | CDS | 47277395 | 47277763 | 47277395 | ID=Msa0603140-mRNA-1:cds;Parent=Msa0603140-mRNA-1 |
| chr4_2 | three_prime_UTR | 47277011 | 47277394 | 47277011 | ID=Msa0603140-mRNA-1:three_prime_utr;Parent=Msa0603140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
