Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653450 | XP_013457066.1 | 97.059 | 306 | 8 | 1 | 1 | 305 | 1 | 306 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653450 | sp|Q9SKU1|CLC1_ARATH | 52.303 | 304 | 119 | 8 | 21 | 301 | 22 | 322 | 1.13e-70 | 225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653450 | G7ZZ83 | 97.059 | 306 | 8 | 1 | 1 | 305 | 1 | 306 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005380 | Msa0653450 | 0.806266 | 8.940702e-50 | -8.615850e-47 |
| Msa0077340 | Msa0653450 | 0.804616 | 1.983121e-49 | -8.615850e-47 |
| Msa0640820 | Msa0653450 | 0.811872 | 5.632144e-51 | -8.615850e-47 |
| Msa0653450 | Msa0695880 | 0.902926 | 5.878438e-79 | -8.615850e-47 |
| Msa0653450 | Msa0702720 | 0.803945 | 2.735412e-49 | -8.615850e-47 |
| Msa0653450 | Msa0842750 | 0.802429 | 5.633452e-49 | -8.615850e-47 |
| Msa0653450 | Msa1039100 | 0.820861 | 5.483449e-53 | -8.615850e-47 |
| Msa0653450 | Msa1129330 | 0.828629 | 8.081972e-55 | -8.615850e-47 |
| Msa0653450 | Msa1325410 | -0.808605 | 2.852490e-50 | -8.615850e-47 |
| Msa0653450 | Msa1341840 | 0.826599 | 2.482992e-54 | -8.615850e-47 |
| Msa0653450 | Msa1461370 | 0.823220 | 1.557349e-53 | -8.615850e-47 |
| Msa0653450 | Msa1464880 | 0.823976 | 1.036437e-53 | -8.615850e-47 |
| Msa0187540 | Msa0653450 | 0.807642 | 4.575257e-50 | -8.615850e-47 |
| Msa0481630 | Msa0653450 | 0.810605 | 1.060577e-50 | -8.615850e-47 |
| Msa0555190 | Msa0653450 | 0.815143 | 1.075002e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653450 | MtrunA17_Chr4g0047571 | 97.059 | 306 | 8 | 1 | 1 | 305 | 1 | 306 | 0.0 | 606 |
| Msa0653450 | MtrunA17_Chr2g0281981 | 68.439 | 301 | 83 | 5 | 9 | 305 | 21 | 313 | 2.49e-122 | 353 |
| Msa0653450 | MtrunA17_Chr8g0387061 | 51.084 | 323 | 119 | 8 | 14 | 305 | 32 | 346 | 4.28e-73 | 229 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653450 | AT2G20760.1 | 52.303 | 304 | 119 | 8 | 21 | 301 | 22 | 322 | 1.15e-71 | 225 |
| Msa0653450 | AT2G40060.1 | 55.300 | 217 | 86 | 4 | 28 | 237 | 16 | 228 | 1.36e-65 | 207 |
| Msa0653450 | AT3G51890.1 | 61.635 | 159 | 58 | 1 | 87 | 245 | 85 | 240 | 5.46e-58 | 187 |
Find 112 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATCCTTTGGTTGTGATTC+AGG | 0.112857 | 4_3:+61472531 | None:intergenic |
| GTTTGCCTGGCTTTGGGCCT+TGG | 0.150519 | 4_3:+61472733 | None:intergenic |
| CGGAGGAAGGTAACGTTCTT+AGG | 0.187267 | 4_3:-61475047 | Msa0653450:CDS |
| CGGTGGGTTTGCCTGGCTTT+GGG | 0.248540 | 4_3:+61472727 | None:intergenic |
| GCAAACCCACCGACCTTTCT+AGG | 0.257216 | 4_3:-61472716 | Msa0653450:CDS |
| TCGGTGGGTTTGCCTGGCTT+TGG | 0.260717 | 4_3:+61472726 | None:intergenic |
| CCGAATACATCCGGAGATTC+CGG | 0.326239 | 4_3:+61475213 | None:intergenic |
| TTTGTGAAAATTCTCTTGAT+TGG | 0.330165 | 4_3:+61472872 | None:intergenic |
| GGCGACGACGACAACTATTC+TGG | 0.330828 | 4_3:-61475297 | Msa0653450:CDS |
| TGAATCTACAGTACCGTTAT+TGG | 0.331003 | 4_3:+61472506 | None:intergenic |
| GGTGCTGATCCATTTGGTTT+AGG | 0.333375 | 4_3:+61472564 | None:intergenic |
| CCAGTGCATGTGATGGAAAA+TGG | 0.335341 | 4_3:-61475147 | Msa0653450:CDS |
| CTTCCTCCTCCTGCTGAGAT+GGG | 0.344842 | 4_3:-61475072 | Msa0653450:CDS |
| GCTTCCTCCTCCTGCTGAGA+TGG | 0.352439 | 4_3:-61475073 | Msa0653450:CDS |
| TGAGAAGAAAAGAGGCAAAA+AGG | 0.365407 | 4_3:-61472787 | Msa0653450:CDS |
| AAAATTACTGGAAAGCAATT+GGG | 0.366531 | 4_3:-61472839 | Msa0653450:CDS |
| TGCCTGGCTTTGGGCCTTGG+AGG | 0.380338 | 4_3:+61472736 | None:intergenic |
| TTCCCTTTGGAGTCTTTAGC+AGG | 0.387984 | 4_3:+61472627 | None:intergenic |
| CCGTTATTGGCAGCATCCTT+TGG | 0.394987 | 4_3:+61472519 | None:intergenic |
| GGTTTAGGTGCTGATCCATT+TGG | 0.396493 | 4_3:+61472579 | None:intergenic |
| GAAAGGTCGGTGGGTTTGCC+TGG | 0.402706 | 4_3:+61472720 | None:intergenic |
| CCGGAATCTCCGGATGTATT+CGG | 0.406444 | 4_3:-61475213 | Msa0653450:CDS |
| GCTGCTGTTGTGTGATCTAC+AGG | 0.409676 | 4_3:+61475237 | None:intergenic |
| ATTATTGTCTATTATGACCT+TGG | 0.418043 | 4_3:-61472293 | Msa0653450:three_prime_UTR |
| ACTTCCGGTGCTGATCCATT+TGG | 0.420411 | 4_3:+61472558 | None:intergenic |
| AACTAGACGAGAAGGAGAAA+AGG | 0.420773 | 4_3:-61473117 | Msa0653450:CDS |
| AACAGCAGCGCCGGAATCTC+CGG | 0.421407 | 4_3:-61475223 | Msa0653450:CDS |
| TTGGAGTCTTTAGCAGGTGC+AGG | 0.422981 | 4_3:+61472633 | None:intergenic |
| TGTGATTCAGGTGCAACTTC+CGG | 0.424313 | 4_3:+61472543 | None:intergenic |
| CTCAATGTTGGCAACCTCAC+GGG | 0.426203 | 4_3:+61472806 | None:intergenic |
| GCAGACTGCTCCTCAGTGGC+AGG | 0.431231 | 4_3:+61472468 | None:intergenic |
| ACAAGGTTCAAAACAGAGAA+AGG | 0.447399 | 4_3:-61473006 | Msa0653450:CDS |
| TCCTCCGGCCCCATCTCAGC+AGG | 0.449365 | 4_3:+61475063 | None:intergenic |
| GTTTGTGGAACAGTTATACT+TGG | 0.453267 | 4_3:-61472895 | Msa0653450:intron |
| TCCTCCTGCTGAGATGGGGC+CGG | 0.456220 | 4_3:-61475067 | Msa0653450:CDS |
| GGTGAAGTGGTCTTCGTTGA+CGG | 0.458970 | 4_3:+61475323 | None:intergenic |
| AATGAGATTAAAGATTATTG+AGG | 0.464614 | 4_3:-61473086 | Msa0653450:CDS |
| ATGGAAAATGGAAACGGTTA+TGG | 0.473482 | 4_3:-61475135 | Msa0653450:CDS |
| GAAACAGCAACTAAACCAAA+TGG | 0.475248 | 4_3:-61472594 | Msa0653450:CDS |
| AAGGTCATAATAGACAATAA+TGG | 0.479197 | 4_3:+61472295 | None:intergenic |
| AGAATAGTTGTCGTCGTCGC+CGG | 0.485975 | 4_3:+61475299 | None:intergenic |
| AGGAGGAAGCACCGGACCAT+CGG | 0.488490 | 4_3:+61475086 | None:intergenic |
| GGATCAGCACCTAAACCAAA+TGG | 0.488856 | 4_3:-61472573 | Msa0653450:CDS |
| CATCACATGCACTGGTTCGA+AGG | 0.488969 | 4_3:+61475155 | None:intergenic |
| GTGATCTACAGGGACATCTT+CGG | 0.492594 | 4_3:+61475248 | None:intergenic |
| AAGTGGGTTTCTATGAGAAA+AGG | 0.493819 | 4_3:-61473048 | Msa0653450:CDS |
| GTGGCAGGAGCTTCTTTCTG+AGG | 0.503664 | 4_3:+61472483 | None:intergenic |
| ACTAGACGAGAAGGAGAAAA+GGG | 0.504571 | 4_3:-61473116 | Msa0653450:CDS |
| ATGTAACATTTGAATTTCCA+AGG | 0.506294 | 4_3:+61472276 | None:intergenic |
| GGAGGAAGGTAACGTTCTTA+GGG | 0.507710 | 4_3:-61475046 | Msa0653450:CDS |
| GTCCTCCAAGGCCCAAAGCC+AGG | 0.509150 | 4_3:-61472738 | Msa0653450:CDS |
| TTAGCAGGTGCAGGTGGAGG+AGG | 0.510354 | 4_3:+61472642 | None:intergenic |
| GGCCCCATCTCAGCAGGAGG+AGG | 0.510809 | 4_3:+61475069 | None:intergenic |
| CCAAAGGATGCTGCCAATAA+CGG | 0.510873 | 4_3:-61472519 | Msa0653450:CDS |
| ATATCTGCCGCATCCTAGAA+AGG | 0.513686 | 4_3:+61472703 | None:intergenic |
| TCCTGCTGAGATGGGGCCGG+AGG | 0.515292 | 4_3:-61475064 | Msa0653450:CDS |
| TGTATTCGGATTCAGCGATC+AGG | 0.515580 | 4_3:-61475199 | Msa0653450:CDS |
| CGTCGTCGCCGGCGGTGAAG+TGG | 0.522107 | 4_3:+61475310 | None:intergenic |
| TCTTTAGCAGGTGCAGGTGG+AGG | 0.524857 | 4_3:+61472639 | None:intergenic |
| GACGACAACTATTCTGGATA+CGG | 0.532542 | 4_3:-61475291 | Msa0653450:CDS |
| CAAGGTTCAAAACAGAGAAA+GGG | 0.537446 | 4_3:-61473005 | Msa0653450:CDS |
| CTAAGAACGTTACCTTCCTC+CGG | 0.537633 | 4_3:+61475048 | None:intergenic |
| TTGGAAATTCAAATGTTACA+TGG | 0.538799 | 4_3:-61472274 | Msa0653450:three_prime_UTR |
| TCTCAATGTTGGCAACCTCA+CGG | 0.539692 | 4_3:+61472805 | None:intergenic |
| AAGGGAGACTGAGCGTAACT+CGG | 0.540887 | 4_3:+61475174 | None:intergenic |
| AAGGTAACGTTCTTAGGGAA+TGG | 0.547512 | 4_3:-61475041 | Msa0653450:CDS |
| CACCTGCTAAAGACTCCAAA+GGG | 0.547927 | 4_3:-61472629 | Msa0653450:CDS |
| AACGAAGACCACTTCACCGC+CGG | 0.548831 | 4_3:-61475318 | Msa0653450:CDS |
| GAGTCTTTAGCAGGTGCAGG+TGG | 0.551285 | 4_3:+61472636 | None:intergenic |
| TCGCTGAATCCGAATACATC+CGG | 0.554031 | 4_3:+61475204 | None:intergenic |
| TGCTATTCAACTAGACGAGA+AGG | 0.554504 | 4_3:-61473125 | Msa0653450:CDS |
| TCAAAACAGAGAAAGGGAAA+AGG | 0.555817 | 4_3:-61472999 | Msa0653450:intron |
| CTTCGAACCAGTGCATGTGA+TGG | 0.556019 | 4_3:-61475154 | Msa0653450:CDS |
| GCTGAGATGGGGCCGGAGGA+AGG | 0.557921 | 4_3:-61475060 | Msa0653450:CDS |
| GTGGTCTTCGTTGACGGTGA+AGG | 0.559914 | 4_3:+61475329 | None:intergenic |
| GCCAACATTGAGAAGAAAAG+AGG | 0.561154 | 4_3:-61472795 | Msa0653450:CDS |
| AAAGATTATTGAGGAAGCTG+AGG | 0.562392 | 4_3:-61473077 | Msa0653450:CDS |
| TCCGGCCCCATCTCAGCAGG+AGG | 0.568004 | 4_3:+61475066 | None:intergenic |
| GAAGCTGAGGATTACAAAGT+GGG | 0.570600 | 4_3:-61473064 | Msa0653450:CDS |
| TTCGTTGACGGTGAAGGACA+TGG | 0.571845 | 4_3:+61475335 | None:intergenic |
| ATCACATGCACTGGTTCGAA+GGG | 0.575990 | 4_3:+61475156 | None:intergenic |
| AGATCACACAACAGCAGCGC+CGG | 0.576259 | 4_3:-61475232 | Msa0653450:CDS |
| TCAGCAGGAGGAGGAAGCAC+CGG | 0.587615 | 4_3:+61475078 | None:intergenic |
| TTCCTCCTCCTGCTGAGATG+GGG | 0.587840 | 4_3:-61475071 | Msa0653450:CDS |
| AAATTACTGGAAAGCAATTG+GGG | 0.589625 | 4_3:-61472838 | Msa0653450:CDS |
| CCTTGGAGGACAGTAACTGA+TGG | 0.599991 | 4_3:+61472750 | None:intergenic |
| CCACCGACCTTTCTAGGATG+CGG | 0.602155 | 4_3:-61472710 | Msa0653450:CDS |
| TGCACCTGAATCACAACCAA+AGG | 0.604455 | 4_3:-61472535 | Msa0653450:CDS |
| ATAGTTGTCGTCGTCGCCGG+CGG | 0.604799 | 4_3:+61475302 | None:intergenic |
| GGAGGAGGAATCATGTGAAG+TGG | 0.606489 | 4_3:+61472657 | None:intergenic |
| TGCTAAAGACTCCAAAGGGA+AGG | 0.606563 | 4_3:-61472625 | Msa0653450:CDS |
| CTGCCGCATCCTAGAAAGGT+CGG | 0.609710 | 4_3:+61472707 | None:intergenic |
| GGAAGCTGAGGATTACAAAG+TGG | 0.610216 | 4_3:-61473065 | Msa0653450:CDS |
| CGCATCCTAGAAAGGTCGGT+GGG | 0.610689 | 4_3:+61472711 | None:intergenic |
| TCAATGTTGGCAACCTCACG+GGG | 0.611587 | 4_3:+61472807 | None:intergenic |
| CCATCAGTTACTGTCCTCCA+AGG | 0.615544 | 4_3:-61472750 | Msa0653450:CDS |
| CCGCATCCTAGAAAGGTCGG+TGG | 0.616621 | 4_3:+61472710 | None:intergenic |
| TAAACCAAATGGATCAGCAC+CGG | 0.618396 | 4_3:-61472562 | Msa0653450:CDS |
| AAAGACTCCAAAGGGAAGGA+CGG | 0.629704 | 4_3:-61472621 | Msa0653450:CDS |
| GCACCTGCTAAAGACTCCAA+AGG | 0.630783 | 4_3:-61472630 | Msa0653450:CDS |
| CTGCTGTTGTGTGATCTACA+GGG | 0.636206 | 4_3:+61475238 | None:intergenic |
| CATGTGATGGAAAATGGAAA+CGG | 0.640946 | 4_3:-61475141 | Msa0653450:CDS |
| GACAACTATTCTGGATACGG+CGG | 0.653119 | 4_3:-61475288 | Msa0653450:CDS |
| GAAAATGGAAACGGTTATGG+CGG | 0.655105 | 4_3:-61475132 | Msa0653450:CDS |
| ACGTTCTTAGGGAATGGCGC+CGG | 0.656812 | 4_3:-61475035 | Msa0653450:intron |
| ATCTACAGGGACATCTTCGG+CGG | 0.664893 | 4_3:+61475251 | None:intergenic |
| TTAATGATTGAAATAAAATG+CGG | 0.669839 | 4_3:+61472337 | None:intergenic |
| GAAAGAAGCTCCTGCCACTG+AGG | 0.676516 | 4_3:-61472478 | Msa0653450:CDS |
| TGCAGCAGACTGCTCCTCAG+TGG | 0.680257 | 4_3:+61472464 | None:intergenic |
| GGAGGAATCATGTGAAGTGG+TGG | 0.685796 | 4_3:+61472660 | None:intergenic |
| TGGGGAGATAATTCCCCGTG+AGG | 0.688947 | 4_3:-61472820 | Msa0653450:CDS |
| GCTCAATGTTGAGACAAACA+AGG | 0.723788 | 4_3:-61473023 | Msa0653450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAGTAAAAAATATAAGGA+AGG | - | chr4_3:61473271-61473290 | Msa0653450:intron | 15.0% |
| !! | TAATAATTAAAAGTAGAGTA+AGG | - | chr4_3:61474182-61474201 | Msa0653450:intron | 15.0% |
| !! | ACAAATAGTATTTGTATTAA+TGG | + | chr4_3:61474348-61474367 | None:intergenic | 15.0% |
| !! | TAATACAAATACTATTTGTT+TGG | - | chr4_3:61474349-61474368 | Msa0653450:intron | 15.0% |
| !!! | ATCTCTAAAAATTAAAAGAA+CGG | + | chr4_3:61474713-61474732 | None:intergenic | 15.0% |
| !! | TTAATGATTGAAATAAAATG+CGG | + | chr4_3:61475301-61475320 | None:intergenic | 15.0% |
| !! | ATTGTCTTGAAAACATTTAT+TGG | - | chr4_3:61473167-61473186 | Msa0653450:intron | 20.0% |
| !! | AACATTTATTGGATTTAATG+AGG | - | chr4_3:61473178-61473197 | Msa0653450:intron | 20.0% |
| !! | ACATTTATTGGATTTAATGA+GGG | - | chr4_3:61473179-61473198 | Msa0653450:intron | 20.0% |
| !! | TAAAAAATATAAGGAAGGAA+GGG | - | chr4_3:61473276-61473295 | Msa0653450:intron | 20.0% |
| !! | TTTATGTTAATTGTCTATGT+TGG | - | chr4_3:61473366-61473385 | Msa0653450:intron | 20.0% |
| !!! | TAATTTTTTTCCTTCGAATT+TGG | - | chr4_3:61473537-61473556 | Msa0653450:intron | 20.0% |
| !!! | TTATATCCATCGATTAAAAA+AGG | - | chr4_3:61473610-61473629 | Msa0653450:intron | 20.0% |
| !! | TCCATCATATTATTAAATGA+TGG | - | chr4_3:61473817-61473836 | Msa0653450:intron | 20.0% |
| !! | CCATCATATTATTAAATGAT+GGG | - | chr4_3:61473818-61473837 | Msa0653450:intron | 20.0% |
| !! | AGATGAAATTAAGATATGTT+TGG | - | chr4_3:61473880-61473899 | Msa0653450:intron | 20.0% |
| !! | TAAAAAGTAAGTTCAGAATA+AGG | - | chr4_3:61474011-61474030 | Msa0653450:intron | 20.0% |
| !! | AATGAGATTAAAGATTATTG+AGG | - | chr4_3:61474549-61474568 | Msa0653450:intron | 20.0% |
| !!! | GTAAAAAGTAATGATAATGT+AGG | + | chr4_3:61474675-61474694 | None:intergenic | 20.0% |
| !! | AAAAAAAGGTTAAAAATGCA+GGG | + | chr4_3:61475247-61475266 | None:intergenic | 20.0% |
| !! | AAAAAAAAGGTTAAAAATGC+AGG | + | chr4_3:61475248-61475267 | None:intergenic | 20.0% |
| !!! | GCATTTTATTTCAATCATTA+AGG | - | chr4_3:61475300-61475319 | Msa0653450:CDS | 20.0% |
| !! | ATGTTTTCTTTTGAATGCTT+AGG | - | chr4_3:61472733-61472752 | Msa0653450:CDS | 25.0% |
| ! | GTAAAAAATATAAGGAAGGA+AGG | - | chr4_3:61473275-61473294 | Msa0653450:intron | 25.0% |
| !! | AATTTGGTTTCTTTATGTGA+TGG | - | chr4_3:61473553-61473572 | Msa0653450:intron | 25.0% |
| !!! | TTTATTTTCGTAGGAAAAGT+AGG | - | chr4_3:61473584-61473603 | Msa0653450:intron | 25.0% |
| !! | TTATTTTCGTAGGAAAAGTA+GGG | - | chr4_3:61473585-61473604 | Msa0653450:intron | 25.0% |
| ! | CCCATCATTTAATAATATGA+TGG | + | chr4_3:61473821-61473840 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTTCTTCCATCTT+AGG | - | chr4_3:61474086-61474105 | Msa0653450:intron | 25.0% |
| ! | AAAGTTTAAACTACCTAAGA+TGG | + | chr4_3:61474102-61474121 | None:intergenic | 25.0% |
| !!! | ATTCGTAAAAGCATCAATAA+CGG | - | chr4_3:61474138-61474157 | Msa0653450:intron | 25.0% |
| ! | AAATGGTTGATCTTTAAACA+TGG | - | chr4_3:61474240-61474259 | Msa0653450:intron | 25.0% |
| ! | TTATTCTGAACCTTAAATGT+AGG | - | chr4_3:61474387-61474406 | Msa0653450:intron | 25.0% |
| ! | AAATACTTGTCCTACATTTA+AGG | + | chr4_3:61474400-61474419 | None:intergenic | 25.0% |
| !! | GATCTTAAATCTCTAAAGAT+CGG | + | chr4_3:61474432-61474451 | None:intergenic | 25.0% |
| ! | TTTGTGAAAATTCTCTTGAT+TGG | + | chr4_3:61474766-61474785 | None:intergenic | 25.0% |
| ! | AAAAATTACTGGAAAGCAAT+TGG | - | chr4_3:61474795-61474814 | Msa0653450:intron | 25.0% |
| ! | AAAATTACTGGAAAGCAATT+GGG | - | chr4_3:61474796-61474815 | Msa0653450:intron | 25.0% |
| ! | AAAAAAGGTTAAAAATGCAG+GGG | + | chr4_3:61475246-61475265 | None:intergenic | 25.0% |
| !! | ACTAAAAGCATGCAAAAAAA+AGG | + | chr4_3:61475261-61475280 | None:intergenic | 25.0% |
| ! | AAGGTCATAATAGACAATAA+TGG | + | chr4_3:61475343-61475362 | None:intergenic | 25.0% |
| ! | ATTATTGTCTATTATGACCT+TGG | - | chr4_3:61475342-61475361 | Msa0653450:exon | 25.0% |
| ! | ATGTAACATTTGAATTTCCA+AGG | + | chr4_3:61475362-61475381 | None:intergenic | 25.0% |
| ! | TTGGAAATTCAAATGTTACA+TGG | - | chr4_3:61475361-61475380 | Msa0653450:five_prime_UTR | 25.0% |
| AATGCTTAGGATTATGAATC+AGG | - | chr4_3:61472746-61472765 | Msa0653450:CDS | 30.0% | |
| ATGCTTAGGATTATGAATCA+GGG | - | chr4_3:61472747-61472766 | Msa0653450:CDS | 30.0% | |
| CCATCAAAAAAACTTGGTTT+CGG | + | chr4_3:61472849-61472868 | None:intergenic | 30.0% | |
| TCTCAACCATCAAAAAAACT+TGG | + | chr4_3:61472855-61472874 | None:intergenic | 30.0% | |
| !! | ATAATGGATGAATATGTCTG+TGG | - | chr4_3:61473025-61473044 | Msa0653450:CDS | 30.0% |
| AATATGTCTGTGGATCAATT+GGG | - | chr4_3:61473035-61473054 | Msa0653450:CDS | 30.0% | |
| CTAGATCTAAGTTTAACAGA+CGG | + | chr4_3:61473089-61473108 | None:intergenic | 30.0% | |
| TGAACATATGAGAAACATGT+AGG | - | chr4_3:61473206-61473225 | Msa0653450:intron | 30.0% | |
| GAACATATGAGAAACATGTA+GGG | - | chr4_3:61473207-61473226 | Msa0653450:intron | 30.0% | |
| AAACACGATATGCATATGTT+TGG | + | chr4_3:61473348-61473367 | None:intergenic | 30.0% | |
| GAACATCATAAAACTACACA+AGG | + | chr4_3:61473470-61473489 | None:intergenic | 30.0% | |
| CATAAAGAAACCAAATTCGA+AGG | + | chr4_3:61473550-61473569 | None:intergenic | 30.0% | |
| !! | TTTCTTTATGTGATGGATCA+TGG | - | chr4_3:61473560-61473579 | Msa0653450:intron | 30.0% |
| !! | GATCATGGATTTATTTTCGT+AGG | - | chr4_3:61473575-61473594 | Msa0653450:intron | 30.0% |
| TGACTATTTACAATCTGACA+CGG | + | chr4_3:61473990-61474009 | None:intergenic | 30.0% | |
| ! | AAATTGTTTTCTCACTACGT+GGG | + | chr4_3:61474310-61474329 | None:intergenic | 30.0% |
| ! | AAAATTGTTTTCTCACTACG+TGG | + | chr4_3:61474311-61474330 | None:intergenic | 30.0% |
| ! | GTAGTGAGAAAACAATTTTC+TGG | - | chr4_3:61474312-61474331 | Msa0653450:intron | 30.0% |
| ACTATTTGTTTGGTCATATG+AGG | - | chr4_3:61474359-61474378 | Msa0653450:intron | 30.0% | |
| TTAGAGATGAACTATGTTTG+TGG | - | chr4_3:61474725-61474744 | Msa0653450:intron | 30.0% | |
| ! | TCAAGAGAATTTTCACAAAG+AGG | - | chr4_3:61474767-61474786 | Msa0653450:intron | 30.0% |
| AAATTACTGGAAAGCAATTG+GGG | - | chr4_3:61474797-61474816 | Msa0653450:intron | 30.0% | |
| !!! | TTGCATGCTTTTAGTTTGTA+TGG | - | chr4_3:61475266-61475285 | Msa0653450:CDS | 30.0% |
| ! | CATGTGATGGAAAATGGAAA+CGG | - | chr4_3:61472494-61472513 | Msa0653450:CDS | 35.0% |
| ATGGAAAATGGAAACGGTTA+TGG | - | chr4_3:61472500-61472519 | Msa0653450:CDS | 35.0% | |
| AGGATTATGAATCAGGGATT+AGG | - | chr4_3:61472753-61472772 | Msa0653450:CDS | 35.0% | |
| !!! | CCGAAACCAAGTTTTTTTGA+TGG | - | chr4_3:61472846-61472865 | Msa0653450:CDS | 35.0% |
| GAGTTCACTAAATCAGCATA+TGG | + | chr4_3:61472887-61472906 | None:intergenic | 35.0% | |
| AAAACAGATCCTACGAACTA+TGG | + | chr4_3:61472981-61473000 | None:intergenic | 35.0% | |
| ! | GTTTTGCATGCTTGTTTATG+CGG | - | chr4_3:61472996-61473015 | Msa0653450:intron | 35.0% |
| ! | TTTTGCATGCTTGTTTATGC+GGG | - | chr4_3:61472997-61473016 | Msa0653450:intron | 35.0% |
| ! | GTTTATGCGGGTTGAAATAA+TGG | - | chr4_3:61473009-61473028 | Msa0653450:CDS | 35.0% |
| GAATATGTCTGTGGATCAAT+TGG | - | chr4_3:61473034-61473053 | Msa0653450:CDS | 35.0% | |
| ATATGTCTGTGGATCAATTG+GGG | - | chr4_3:61473036-61473055 | Msa0653450:CDS | 35.0% | |
| CGTCTGTTAAACTTAGATCT+AGG | - | chr4_3:61473087-61473106 | Msa0653450:CDS | 35.0% | |
| !!! | CTACAGCCTTTTTTAATCGA+TGG | + | chr4_3:61473619-61473638 | None:intergenic | 35.0% |
| AAGTTGTGCTTCAGTTGAAA+GGG | + | chr4_3:61473715-61473734 | None:intergenic | 35.0% | |
| AAAGTTGTGCTTCAGTTGAA+AGG | + | chr4_3:61473716-61473735 | None:intergenic | 35.0% | |
| ATGAACCAGAAGATCAAAGT+AGG | - | chr4_3:61473855-61473874 | Msa0653450:intron | 35.0% | |
| TCTATCCTACTTTGATCTTC+TGG | + | chr4_3:61473863-61473882 | None:intergenic | 35.0% | |
| !! | ATGCAGAGCTTATAGTTTTG+TGG | + | chr4_3:61473949-61473968 | None:intergenic | 35.0% |
| AATAACGGTTGAGCAAATGA+AGG | - | chr4_3:61474153-61474172 | Msa0653450:intron | 35.0% | |
| GTAAGGTCAAAGAAAGCAAT+AGG | - | chr4_3:61474199-61474218 | Msa0653450:intron | 35.0% | |
| TGGTGTATGACAAGAAGTTA+TGG | - | chr4_3:61474260-61474279 | Msa0653450:intron | 35.0% | |
| AAAGATTATTGAGGAAGCTG+AGG | - | chr4_3:61474558-61474577 | Msa0653450:intron | 35.0% | |
| ! | AAGTGGGTTTCTATGAGAAA+AGG | - | chr4_3:61474587-61474606 | Msa0653450:intron | 35.0% |
| ACAAGGTTCAAAACAGAGAA+AGG | - | chr4_3:61474629-61474648 | Msa0653450:intron | 35.0% | |
| CAAGGTTCAAAACAGAGAAA+GGG | - | chr4_3:61474630-61474649 | Msa0653450:intron | 35.0% | |
| TCAAAACAGAGAAAGGGAAA+AGG | - | chr4_3:61474636-61474655 | Msa0653450:intron | 35.0% | |
| GTTTGTGGAACAGTTATACT+TGG | - | chr4_3:61474740-61474759 | Msa0653450:intron | 35.0% | |
| AAGAGGCTGACAAAAATTAC+TGG | - | chr4_3:61474784-61474803 | Msa0653450:intron | 35.0% | |
| TGAGAAGAAAAGAGGCAAAA+AGG | - | chr4_3:61474848-61474867 | Msa0653450:intron | 35.0% | |
| GAAACAGCAACTAAACCAAA+TGG | - | chr4_3:61475041-61475060 | Msa0653450:CDS | 35.0% | |
| TGAATCTACAGTACCGTTAT+TGG | + | chr4_3:61475132-61475151 | None:intergenic | 35.0% | |
| GACGACAACTATTCTGGATA+CGG | - | chr4_3:61472344-61472363 | Msa0653450:three_prime_UTR | 40.0% | |
| GAAAATGGAAACGGTTATGG+CGG | - | chr4_3:61472503-61472522 | Msa0653450:CDS | 40.0% | |
| AAGGTAACGTTCTTAGGGAA+TGG | - | chr4_3:61472594-61472613 | Msa0653450:CDS | 40.0% | |
| ! | AAGGAATCTGAAACACTCAC+CGG | + | chr4_3:61472622-61472641 | None:intergenic | 40.0% |
| CAAACGAGATCTAGCATAGA+AGG | + | chr4_3:61472641-61472660 | None:intergenic | 40.0% | |
| TGATTTAGTGAACTCTTGCG+TGG | - | chr4_3:61472892-61472911 | Msa0653450:intron | 40.0% | |
| !!! | GGGTTAGTTTTATGCTCTGT+TGG | - | chr4_3:61472929-61472948 | Msa0653450:intron | 40.0% |
| GTTCGTATTCCATAGTTCGT+AGG | - | chr4_3:61472969-61472988 | Msa0653450:intron | 40.0% | |
| !! | ATCGTTAGAAGCACTCACAA+TGG | + | chr4_3:61473322-61473341 | None:intergenic | 40.0% |
| ACGTGTTGCAACAATGAGAT+AGG | + | chr4_3:61473492-61473511 | None:intergenic | 40.0% | |
| AGTTTCTACCATGTGATTGG+AGG | + | chr4_3:61473672-61473691 | None:intergenic | 40.0% | |
| TGGAGTTTCTACCATGTGAT+TGG | + | chr4_3:61473675-61473694 | None:intergenic | 40.0% | |
| TGGAATGCAAGTTTAGCAAG+AGG | - | chr4_3:61473769-61473788 | Msa0653450:intron | 40.0% | |
| TGCTATTCAACTAGACGAGA+AGG | - | chr4_3:61474510-61474529 | Msa0653450:intron | 40.0% | |
| AACTAGACGAGAAGGAGAAA+AGG | - | chr4_3:61474518-61474537 | Msa0653450:intron | 40.0% | |
| ACTAGACGAGAAGGAGAAAA+GGG | - | chr4_3:61474519-61474538 | Msa0653450:intron | 40.0% | |
| GAAGCTGAGGATTACAAAGT+GGG | - | chr4_3:61474571-61474590 | Msa0653450:intron | 40.0% | |
| GCTCAATGTTGAGACAAACA+AGG | - | chr4_3:61474612-61474631 | Msa0653450:intron | 40.0% | |
| GCCAACATTGAGAAGAAAAG+AGG | - | chr4_3:61474840-61474859 | Msa0653450:intron | 40.0% | |
| ! | GCCTCTTTTCTTCTCAATGT+TGG | + | chr4_3:61474844-61474863 | None:intergenic | 40.0% |
| GAAAAGAGGCAAAAAGGATC+AGG | - | chr4_3:61474854-61474873 | Msa0653450:intron | 40.0% | |
| TAAACCAAATGGATCAGCAC+CGG | - | chr4_3:61475052-61475071 | Msa0653450:CDS | 40.0% | |
| GACAACTATTCTGGATACGG+CGG | - | chr4_3:61472347-61472366 | Msa0653450:three_prime_UTR | 45.0% | |
| GTGATCTACAGGGACATCTT+CGG | + | chr4_3:61472390-61472409 | None:intergenic | 45.0% | |
| CTGCTGTTGTGTGATCTACA+GGG | + | chr4_3:61472400-61472419 | None:intergenic | 45.0% | |
| TCGCTGAATCCGAATACATC+CGG | + | chr4_3:61472434-61472453 | None:intergenic | 45.0% | |
| TGTATTCGGATTCAGCGATC+AGG | - | chr4_3:61472436-61472455 | Msa0653450:three_prime_UTR | 45.0% | |
| !! | ATCACATGCACTGGTTCGAA+GGG | + | chr4_3:61472482-61472501 | None:intergenic | 45.0% |
| ! | CCATTTTCCATCACATGCAC+TGG | + | chr4_3:61472491-61472510 | None:intergenic | 45.0% |
| ! | CCAGTGCATGTGATGGAAAA+TGG | - | chr4_3:61472488-61472507 | Msa0653450:CDS | 45.0% |
| CTAAGAACGTTACCTTCCTC+CGG | + | chr4_3:61472590-61472609 | None:intergenic | 45.0% | |
| GGAGGAAGGTAACGTTCTTA+GGG | - | chr4_3:61472589-61472608 | Msa0653450:CDS | 45.0% | |
| TGCTCTGTTGGATTGCAGTT+TGG | - | chr4_3:61472941-61472960 | Msa0653450:intron | 45.0% | |
| GTTTGACAACAATGCAGCGT+AGG | - | chr4_3:61473233-61473252 | Msa0653450:intron | 45.0% | |
| ! | GAGGTCAAGAGTGTGTGTAA+TGG | + | chr4_3:61473653-61473672 | None:intergenic | 45.0% |
| ACTCTTGACCTCCAATCACA+TGG | - | chr4_3:61473661-61473680 | Msa0653450:intron | 45.0% | |
| CTTCAGTTGAAAGGGAGATG+TGG | + | chr4_3:61473707-61473726 | None:intergenic | 45.0% | |
| ACTACGTGGGATTGACTACA+AGG | + | chr4_3:61474297-61474316 | None:intergenic | 45.0% | |
| GGAAGCTGAGGATTACAAAG+TGG | - | chr4_3:61474570-61474589 | Msa0653450:intron | 45.0% | |
| TCTCAATGTTGGCAACCTCA+CGG | + | chr4_3:61474833-61474852 | None:intergenic | 45.0% | |
| ATATCTGCCGCATCCTAGAA+AGG | + | chr4_3:61474935-61474954 | None:intergenic | 45.0% | |
| CACCTGCTAAAGACTCCAAA+GGG | - | chr4_3:61475006-61475025 | Msa0653450:intron | 45.0% | |
| !! | TTCCCTTTGGAGTCTTTAGC+AGG | + | chr4_3:61475011-61475030 | None:intergenic | 45.0% |
| TGCTAAAGACTCCAAAGGGA+AGG | - | chr4_3:61475010-61475029 | Msa0653450:intron | 45.0% | |
| AAAGACTCCAAAGGGAAGGA+CGG | - | chr4_3:61475014-61475033 | Msa0653450:intron | 45.0% | |
| ! | TTCTTTTCCGTCCTTCCCTT+TGG | + | chr4_3:61475024-61475043 | None:intergenic | 45.0% |
| !! | GGTTTAGGTGCTGATCCATT+TGG | + | chr4_3:61475059-61475078 | None:intergenic | 45.0% |
| GGATCAGCACCTAAACCAAA+TGG | - | chr4_3:61475062-61475081 | Msa0653450:CDS | 45.0% | |
| !! | GGTGCTGATCCATTTGGTTT+AGG | + | chr4_3:61475053-61475072 | None:intergenic | 45.0% |
| TGTGATTCAGGTGCAACTTC+CGG | + | chr4_3:61475095-61475114 | None:intergenic | 45.0% | |
| TGCACCTGAATCACAACCAA+AGG | - | chr4_3:61475100-61475119 | Msa0653450:CDS | 45.0% | |
| GCATCCTTTGGTTGTGATTC+AGG | + | chr4_3:61475107-61475126 | None:intergenic | 45.0% | |
| CCAAAGGATGCTGCCAATAA+CGG | - | chr4_3:61475116-61475135 | Msa0653450:CDS | 45.0% | |
| !! | TATATATAGTAAAAAATATA+AGG | - | chr4_3:61473267-61473286 | Msa0653450:intron | 5.0% |
| !! | AAAAATTAAAACAAAATATA+TGG | - | chr4_3:61473749-61473768 | Msa0653450:intron | 5.0% |
| !! | ATAATTATTAAGAATTTAAA+TGG | - | chr4_3:61474223-61474242 | Msa0653450:intron | 5.0% |
| TTCGTTGACGGTGAAGGACA+TGG | + | chr4_3:61472303-61472322 | None:intergenic | 50.0% | |
| GGTGAAGTGGTCTTCGTTGA+CGG | + | chr4_3:61472315-61472334 | None:intergenic | 50.0% | |
| AGAATAGTTGTCGTCGTCGC+CGG | + | chr4_3:61472339-61472358 | None:intergenic | 50.0% | |
| ATCTACAGGGACATCTTCGG+CGG | + | chr4_3:61472387-61472406 | None:intergenic | 50.0% | |
| GCTGCTGTTGTGTGATCTAC+AGG | + | chr4_3:61472401-61472420 | None:intergenic | 50.0% | |
| CCGAATACATCCGGAGATTC+CGG | + | chr4_3:61472425-61472444 | None:intergenic | 50.0% | |
| CCGGAATCTCCGGATGTATT+CGG | - | chr4_3:61472422-61472441 | Msa0653450:three_prime_UTR | 50.0% | |
| AAGGGAGACTGAGCGTAACT+CGG | + | chr4_3:61472464-61472483 | None:intergenic | 50.0% | |
| !! | CATCACATGCACTGGTTCGA+AGG | + | chr4_3:61472483-61472502 | None:intergenic | 50.0% |
| CTTCGAACCAGTGCATGTGA+TGG | - | chr4_3:61472481-61472500 | Msa0653450:CDS | 50.0% | |
| ! | GACGACGTTTTTGTCTCCGA+TGG | - | chr4_3:61472533-61472552 | Msa0653450:CDS | 50.0% |
| ! | CGTTTTTGTCTCCGATGGTC+CGG | - | chr4_3:61472538-61472557 | Msa0653450:CDS | 50.0% |
| CGGAGGAAGGTAACGTTCTT+AGG | - | chr4_3:61472588-61472607 | Msa0653450:CDS | 50.0% | |
| GGGAGATGTGGTGCAATTGT+TGG | + | chr4_3:61473695-61473714 | None:intergenic | 50.0% | |
| GAGGTAGATCACAAGTCTCG+TGG | - | chr4_3:61473788-61473807 | Msa0653450:intron | 50.0% | |
| TCAATGTTGGCAACCTCACG+GGG | + | chr4_3:61474831-61474850 | None:intergenic | 50.0% | |
| CTCAATGTTGGCAACCTCAC+GGG | + | chr4_3:61474832-61474851 | None:intergenic | 50.0% | |
| CCTTGGAGGACAGTAACTGA+TGG | + | chr4_3:61474888-61474907 | None:intergenic | 50.0% | |
| CCATCAGTTACTGTCCTCCA+AGG | - | chr4_3:61474885-61474904 | Msa0653450:intron | 50.0% | |
| GGAGGAATCATGTGAAGTGG+TGG | + | chr4_3:61474978-61474997 | None:intergenic | 50.0% | |
| GGAGGAGGAATCATGTGAAG+TGG | + | chr4_3:61474981-61475000 | None:intergenic | 50.0% | |
| TTGGAGTCTTTAGCAGGTGC+AGG | + | chr4_3:61475005-61475024 | None:intergenic | 50.0% | |
| GCACCTGCTAAAGACTCCAA+AGG | - | chr4_3:61475005-61475024 | Msa0653450:intron | 50.0% | |
| !! | ACTTCCGGTGCTGATCCATT+TGG | + | chr4_3:61475080-61475099 | None:intergenic | 50.0% |
| CCGTTATTGGCAGCATCCTT+TGG | + | chr4_3:61475119-61475138 | None:intergenic | 50.0% | |
| GTGGTCTTCGTTGACGGTGA+AGG | + | chr4_3:61472309-61472328 | None:intergenic | 55.0% | |
| AACGAAGACCACTTCACCGC+CGG | - | chr4_3:61472317-61472336 | Msa0653450:three_prime_UTR | 55.0% | |
| GGCGACGACGACAACTATTC+TGG | - | chr4_3:61472338-61472357 | Msa0653450:three_prime_UTR | 55.0% | |
| AGATCACACAACAGCAGCGC+CGG | - | chr4_3:61472403-61472422 | Msa0653450:three_prime_UTR | 55.0% | |
| CTTCCTCCTCCTGCTGAGAT+GGG | - | chr4_3:61472563-61472582 | Msa0653450:CDS | 55.0% | |
| TTCCTCCTCCTGCTGAGATG+GGG | - | chr4_3:61472564-61472583 | Msa0653450:CDS | 55.0% | |
| ACGTTCTTAGGGAATGGCGC+CGG | - | chr4_3:61472600-61472619 | Msa0653450:CDS | 55.0% | |
| !! | TGCGTGGTGACGAGCTTTTG+AGG | - | chr4_3:61472908-61472927 | Msa0653450:intron | 55.0% |
| !! | GCGTGGTGACGAGCTTTTGA+GGG | - | chr4_3:61472909-61472928 | Msa0653450:intron | 55.0% |
| TGGGGAGATAATTCCCCGTG+AGG | - | chr4_3:61474815-61474834 | Msa0653450:intron | 55.0% | |
| GCAAACCCACCGACCTTTCT+AGG | - | chr4_3:61474919-61474938 | Msa0653450:intron | 55.0% | |
| CGCATCCTAGAAAGGTCGGT+GGG | + | chr4_3:61474927-61474946 | None:intergenic | 55.0% | |
| !! | CCACCGACCTTTCTAGGATG+CGG | - | chr4_3:61474925-61474944 | Msa0653450:intron | 55.0% |
| CTGCCGCATCCTAGAAAGGT+CGG | + | chr4_3:61474931-61474950 | None:intergenic | 55.0% | |
| TCTTTAGCAGGTGCAGGTGG+AGG | + | chr4_3:61474999-61475018 | None:intergenic | 55.0% | |
| GAGTCTTTAGCAGGTGCAGG+TGG | + | chr4_3:61475002-61475021 | None:intergenic | 55.0% | |
| GTGGCAGGAGCTTCTTTCTG+AGG | + | chr4_3:61475155-61475174 | None:intergenic | 55.0% | |
| GAAAGAAGCTCCTGCCACTG+AGG | - | chr4_3:61475157-61475176 | Msa0653450:CDS | 55.0% | |
| ATAGTTGTCGTCGTCGCCGG+CGG | + | chr4_3:61472336-61472355 | None:intergenic | 60.0% | |
| ! | AACAGCAGCGCCGGAATCTC+CGG | - | chr4_3:61472412-61472431 | Msa0653450:three_prime_UTR | 60.0% |
| !! | AGGAGGAAGCACCGGACCAT+CGG | + | chr4_3:61472552-61472571 | None:intergenic | 60.0% |
| ! | TCAGCAGGAGGAGGAAGCAC+CGG | + | chr4_3:61472560-61472579 | None:intergenic | 60.0% |
| GCTTCCTCCTCCTGCTGAGA+TGG | - | chr4_3:61472562-61472581 | Msa0653450:CDS | 60.0% | |
| !! | GTTTGCCTGGCTTTGGGCCT+TGG | + | chr4_3:61474905-61474924 | None:intergenic | 60.0% |
| ! | CGGTGGGTTTGCCTGGCTTT+GGG | + | chr4_3:61474911-61474930 | None:intergenic | 60.0% |
| ! | TCGGTGGGTTTGCCTGGCTT+TGG | + | chr4_3:61474912-61474931 | None:intergenic | 60.0% |
| ! | GAAAGGTCGGTGGGTTTGCC+TGG | + | chr4_3:61474918-61474937 | None:intergenic | 60.0% |
| CCGCATCCTAGAAAGGTCGG+TGG | + | chr4_3:61474928-61474947 | None:intergenic | 60.0% | |
| TTAGCAGGTGCAGGTGGAGG+AGG | + | chr4_3:61474996-61475015 | None:intergenic | 60.0% | |
| TGCAGCAGACTGCTCCTCAG+TGG | + | chr4_3:61475174-61475193 | None:intergenic | 60.0% | |
| TCCTCCTGCTGAGATGGGGC+CGG | - | chr4_3:61472568-61472587 | Msa0653450:CDS | 65.0% | |
| GTCCTCCAAGGCCCAAAGCC+AGG | - | chr4_3:61474897-61474916 | Msa0653450:intron | 65.0% | |
| !! | TGCCTGGCTTTGGGCCTTGG+AGG | + | chr4_3:61474902-61474921 | None:intergenic | 65.0% |
| GCAGACTGCTCCTCAGTGGC+AGG | + | chr4_3:61475170-61475189 | None:intergenic | 65.0% | |
| GGCCCCATCTCAGCAGGAGG+AGG | + | chr4_3:61472569-61472588 | None:intergenic | 70.0% | |
| TCCGGCCCCATCTCAGCAGG+AGG | + | chr4_3:61472572-61472591 | None:intergenic | 70.0% | |
| TCCTGCTGAGATGGGGCCGG+AGG | - | chr4_3:61472571-61472590 | Msa0653450:CDS | 70.0% | |
| TCCTCCGGCCCCATCTCAGC+AGG | + | chr4_3:61472575-61472594 | None:intergenic | 70.0% | |
| GCTGAGATGGGGCCGGAGGA+AGG | - | chr4_3:61472575-61472594 | Msa0653450:CDS | 70.0% | |
| CGTCGTCGCCGGCGGTGAAG+TGG | + | chr4_3:61472328-61472347 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 61472221 | 61475436 | 61472221 | ID=Msa0653450;Name=Msa0653450 |
| chr4_3 | mRNA | 61472221 | 61475436 | 61472221 | ID=Msa0653450-mRNA-1;Parent=Msa0653450;Name=Msa0653450-mRNA-1;_AED=0.03;_eAED=0.03;_QI=81|1|1|1|1|1|3|240|305 |
| chr4_3 | exon | 61472221 | 61472904 | 61472221 | ID=Msa0653450-mRNA-1:exon:16828;Parent=Msa0653450-mRNA-1 |
| chr4_3 | exon | 61473000 | 61473153 | 61473000 | ID=Msa0653450-mRNA-1:exon:16827;Parent=Msa0653450-mRNA-1 |
| chr4_3 | exon | 61475036 | 61475436 | 61475036 | ID=Msa0653450-mRNA-1:exon:16826;Parent=Msa0653450-mRNA-1 |
| chr4_3 | five_prime_UTR | 61475356 | 61475436 | 61475356 | ID=Msa0653450-mRNA-1:five_prime_utr;Parent=Msa0653450-mRNA-1 |
| chr4_3 | CDS | 61475036 | 61475355 | 61475036 | ID=Msa0653450-mRNA-1:cds;Parent=Msa0653450-mRNA-1 |
| chr4_3 | CDS | 61473000 | 61473153 | 61473000 | ID=Msa0653450-mRNA-1:cds;Parent=Msa0653450-mRNA-1 |
| chr4_3 | CDS | 61472461 | 61472904 | 61472461 | ID=Msa0653450-mRNA-1:cds;Parent=Msa0653450-mRNA-1 |
| chr4_3 | three_prime_UTR | 61472221 | 61472460 | 61472221 | ID=Msa0653450-mRNA-1:three_prime_utr;Parent=Msa0653450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
