Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039100 | XP_003626299.1 | 99.291 | 282 | 2 | 0 | 1 | 282 | 1 | 282 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039100 | sp|Q54TS4|YIPF1_DICDI | 33.761 | 234 | 148 | 3 | 49 | 281 | 96 | 323 | 3.82e-39 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039100 | G7KYP9 | 99.291 | 282 | 2 | 0 | 1 | 282 | 1 | 282 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0098240 | Msa1039100 | 0.811291 | 7.536509e-51 | -8.615850e-47 |
| Msa0610690 | Msa1039100 | 0.830141 | 3.471068e-55 | -8.615850e-47 |
| Msa0653450 | Msa1039100 | 0.820861 | 5.483449e-53 | -8.615850e-47 |
| Msa0657720 | Msa1039100 | 0.817400 | 3.362654e-52 | -8.615850e-47 |
| Msa0702410 | Msa1039100 | 0.824608 | 7.360939e-54 | -8.615850e-47 |
| Msa0702720 | Msa1039100 | 0.830778 | 2.424383e-55 | -8.615850e-47 |
| Msa0702790 | Msa1039100 | 0.807426 | 5.085077e-50 | -8.615850e-47 |
| Msa0828950 | Msa1039100 | 0.807407 | 5.132091e-50 | -8.615850e-47 |
| Msa0235290 | Msa1039100 | 0.806255 | 8.988233e-50 | -8.615850e-47 |
| Msa0402070 | Msa1039100 | -0.801998 | 6.909813e-49 | -8.615850e-47 |
| Msa1039100 | Msa1082410 | 0.803773 | 2.970711e-49 | -8.615850e-47 |
| Msa1039100 | Msa1083700 | 0.868296 | 7.255139e-66 | -8.615850e-47 |
| Msa1039100 | Msa1212830 | 0.801574 | 8.444939e-49 | -8.615850e-47 |
| Msa1039100 | Msa1323070 | 0.813301 | 2.743819e-51 | -8.615850e-47 |
| Msa1039100 | Msa1341840 | 0.836773 | 7.687555e-57 | -8.615850e-47 |
| Msa1039100 | Msa1381260 | 0.858105 | 1.035380e-62 | -8.615850e-47 |
| Msa1039100 | Msa1439250 | 0.827366 | 1.628114e-54 | -8.615850e-47 |
| Msa1039100 | Msa1461370 | 0.821539 | 3.826972e-53 | -8.615850e-47 |
| Msa0304570 | Msa1039100 | 0.801260 | 9.791269e-49 | -8.615850e-47 |
| Msa0579160 | Msa1039100 | 0.802833 | 4.649758e-49 | -8.615850e-47 |
| Msa0579220 | Msa1039100 | 0.801448 | 8.962115e-49 | -8.615850e-47 |
| Msa0842750 | Msa1039100 | 0.814115 | 1.815631e-51 | -8.615850e-47 |
| Msa0940910 | Msa1039100 | 0.815100 | 1.098809e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039100 | MtrunA17_Chr7g0272931 | 99.291 | 282 | 2 | 0 | 1 | 282 | 1 | 282 | 0.0 | 570 |
| Msa1039100 | MtrunA17_Chr5g0436001 | 37.722 | 281 | 162 | 6 | 2 | 278 | 1 | 272 | 2.47e-58 | 187 |
| Msa1039100 | MtrunA17_Chr3g0112431 | 36.655 | 281 | 165 | 5 | 2 | 278 | 1 | 272 | 3.85e-52 | 171 |
| Msa1039100 | MtrunA17_Chr3g0112461 | 36.585 | 246 | 146 | 4 | 2 | 243 | 1 | 240 | 7.62e-46 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1039100 | AT5G27490.1 | 79.433 | 282 | 58 | 0 | 1 | 282 | 1 | 282 | 1.41e-173 | 481 |
| Msa1039100 | AT3G05280.1 | 77.936 | 281 | 62 | 0 | 2 | 282 | 1 | 281 | 6.55e-159 | 443 |
| Msa1039100 | AT2G39805.1 | 37.589 | 282 | 155 | 7 | 7 | 278 | 4 | 274 | 5.03e-57 | 184 |
| Msa1039100 | AT2G39805.2 | 37.589 | 282 | 156 | 7 | 7 | 278 | 4 | 275 | 1.50e-55 | 181 |
Find 99 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATTAATGAATTTCTAAA+AGG | 0.247110 | 7_1:+76232331 | None:intergenic |
| GTTCAACTATTCTGCCTATA+TGG | 0.275933 | 7_1:-76232737 | Msa1039100:CDS |
| AATATTTGTAGCAGCATCTA+TGG | 0.291783 | 7_1:-76232921 | Msa1039100:CDS |
| TCAGTTAACCTCTTGATGTT+GGG | 0.301686 | 7_1:-76232114 | Msa1039100:three_prime_UTR |
| TTTGTGTAATCATTCGTTTA+TGG | 0.311941 | 7_1:-76232276 | Msa1039100:three_prime_UTR |
| TACTCAGGTATGGACCATTC+TGG | 0.345340 | 7_1:-76232958 | Msa1039100:intron |
| AAAAGGTCTACTTACAAATC+AGG | 0.347085 | 7_1:+76234373 | None:intergenic |
| TTTGTTTCATAATGCAATTA+TGG | 0.353945 | 7_1:-76232227 | Msa1039100:three_prime_UTR |
| GGAAGATTACCGGTGGTTCT+AGG | 0.365279 | 7_1:-76235436 | Msa1039100:CDS |
| TGGGTGATTGCAGGTGTGGC+AGG | 0.371118 | 7_1:-76232561 | Msa1039100:CDS |
| AGGTGGTTCTTCATTGTTGC+TGG | 0.371924 | 7_1:-76232477 | Msa1039100:CDS |
| CATTTGTGGCACTTAACCTT+CGG | 0.374032 | 7_1:-76232524 | Msa1039100:CDS |
| CAATCCAGTTTCCTCTTAAA+CGG | 0.381688 | 7_1:+76232395 | None:intergenic |
| CAAGCTCAGGGGAAGATTAC+CGG | 0.388535 | 7_1:-76235446 | Msa1039100:CDS |
| GAGCTGGAATAAAGACAAAC+AGG | 0.390832 | 7_1:+76232708 | None:intergenic |
| TTCTTCTGATGAACCTCAGC+AGG | 0.399077 | 7_1:-76234530 | Msa1039100:CDS |
| GTTTGTCTTTATTCCAGCTC+TGG | 0.400569 | 7_1:-76232705 | Msa1039100:intron |
| CTCAGCAGGGTGGTTGGCTT+CGG | 0.402877 | 7_1:-76234516 | Msa1039100:CDS |
| TCATTAAAAGTTCCTCTGAA+TGG | 0.411432 | 7_1:+76234412 | None:intergenic |
| ACAAGCTGAAGGATCAGAAA+TGG | 0.419782 | 7_1:-76232874 | Msa1039100:CDS |
| ACGGTGACCGGTGGTGGATC+TGG | 0.425336 | 7_1:+76235647 | None:intergenic |
| AACTGAAAATTTGTCTTCAA+AGG | 0.429198 | 7_1:+76232131 | None:intergenic |
| TTCAGTTAACCTCTTGATGT+TGG | 0.430518 | 7_1:-76232115 | Msa1039100:three_prime_UTR |
| ATTGATAGTCAACAGCTTCA+AGG | 0.431513 | 7_1:-76235779 | Msa1039100:CDS |
| CTTCACGGTATCCGTTTAAG+AGG | 0.439293 | 7_1:-76232406 | Msa1039100:exon |
| CAGTTAACCTCTTGATGTTG+GGG | 0.440160 | 7_1:-76232113 | Msa1039100:three_prime_UTR |
| ATATTCAGATGGGTGATTGC+AGG | 0.441456 | 7_1:-76232570 | Msa1039100:CDS |
| ATTTCCTCCATCGCAAGCTC+AGG | 0.446741 | 7_1:-76235459 | Msa1039100:CDS |
| GAAGTATCGACATCAAAGTA+TGG | 0.450124 | 7_1:+76234469 | None:intergenic |
| GTATCCGTTTAAGAGGAAAC+TGG | 0.456417 | 7_1:-76232399 | Msa1039100:exon |
| ATTTGTGGCACTTAACCTTC+GGG | 0.459603 | 7_1:-76232523 | Msa1039100:CDS |
| AATCTGGTGACTTGGTCTGC+TGG | 0.463897 | 7_1:-76232839 | Msa1039100:CDS |
| GAGAAGCAACTTACCAGAGC+TGG | 0.464299 | 7_1:+76232692 | None:intergenic |
| CAAACAGGGAATATCCATAT+AGG | 0.469322 | 7_1:+76232723 | None:intergenic |
| TCACATTAACAAGGCAACTT+AGG | 0.477094 | 7_1:-76232154 | Msa1039100:three_prime_UTR |
| ATTAAAGATCTACCTCTTCA+CGG | 0.481807 | 7_1:-76232421 | Msa1039100:CDS |
| ATGGGACTATGACATAAATC+TGG | 0.483862 | 7_1:-76232855 | Msa1039100:CDS |
| GTGTTTGTCCATTGTCCCAT+TGG | 0.488665 | 7_1:-76232595 | Msa1039100:CDS |
| ATGAACCTCAGCAGGGTGGT+TGG | 0.497811 | 7_1:-76234522 | Msa1039100:CDS |
| GGAAAGATGATGCAAGGAGG+AGG | 0.498848 | 7_1:-76235815 | Msa1039100:exon |
| ATGAAATATATATACGATGA+AGG | 0.500353 | 7_1:-76232367 | Msa1039100:three_prime_UTR |
| AACTTGACGGTGACCGGTGG+TGG | 0.508137 | 7_1:+76235641 | None:intergenic |
| GTTCATGTCAGCAACATTTG+TGG | 0.509994 | 7_1:-76232538 | Msa1039100:CDS |
| CAAGCTGAAGGATCAGAAAT+GGG | 0.517844 | 7_1:-76232873 | Msa1039100:CDS |
| CCCATCTGAATATATCCAAT+GGG | 0.523908 | 7_1:+76232580 | None:intergenic |
| TTCCCCTGAGCTTGCGATGG+AGG | 0.524017 | 7_1:+76235455 | None:intergenic |
| ATCTTCCCCTGAGCTTGCGA+TGG | 0.526679 | 7_1:+76235452 | None:intergenic |
| CCAGTGAACTTGACGGTGAC+CGG | 0.528555 | 7_1:+76235635 | None:intergenic |
| CGGGCACATATCATGTCGGC+AGG | 0.530948 | 7_1:-76232504 | Msa1039100:CDS |
| CCCATTGGATATATTCAGAT+GGG | 0.538766 | 7_1:-76232580 | Msa1039100:CDS |
| CCGGTCACCGTCAAGTTCAC+TGG | 0.541760 | 7_1:-76235635 | Msa1039100:intron |
| TCCCATTGGATATATTCAGA+TGG | 0.544799 | 7_1:-76232581 | Msa1039100:CDS |
| TCATCAGAAGAACCAGATGC+AGG | 0.552062 | 7_1:+76234541 | None:intergenic |
| GTTCGTACCAGTGAACTTGA+CGG | 0.552167 | 7_1:+76235628 | None:intergenic |
| GGGTGATTGCAGGTGTGGCA+GGG | 0.554516 | 7_1:-76232560 | Msa1039100:CDS |
| TGCATTATGAAACAAATCAC+AGG | 0.556690 | 7_1:+76232234 | None:intergenic |
| GAAGAAGGAAAGATGATGCA+AGG | 0.556931 | 7_1:-76235821 | Msa1039100:exon |
| ATGACATAAATCTGGTGACT+TGG | 0.561043 | 7_1:-76232847 | Msa1039100:CDS |
| GTATAGACAAAGAGGAATGA+TGG | 0.561761 | 7_1:+76232796 | None:intergenic |
| TCTGTTGCAGTTGGCTCTAG+CGG | 0.568610 | 7_1:-76232448 | Msa1039100:CDS |
| ACCCATCTGAATATATCCAA+TGG | 0.568674 | 7_1:+76232579 | None:intergenic |
| ATATCATGTCGGCAGGTGAA+AGG | 0.568955 | 7_1:-76232497 | Msa1039100:CDS |
| ATACTTTGATGTCGATACTT+CGG | 0.569777 | 7_1:-76234467 | Msa1039100:CDS |
| GAATATATCCAATGGGACAA+TGG | 0.572781 | 7_1:+76232587 | None:intergenic |
| TGTGGATCTGAAGAAGAAGA+AGG | 0.574954 | 7_1:-76235836 | Msa1039100:five_prime_UTR |
| GACCGGTGGTGGATCTGGAA+CGG | 0.576104 | 7_1:+76235652 | None:intergenic |
| CCGGTACAGAGAAGTATTTG+AGG | 0.576562 | 7_1:+76232768 | None:intergenic |
| AAAGGTCTACTTACAAATCA+GGG | 0.579016 | 7_1:+76234374 | None:intergenic |
| CCTCAAATACTTCTCTGTAC+CGG | 0.581136 | 7_1:-76232768 | Msa1039100:CDS |
| AGTTAACCTCTTGATGTTGG+GGG | 0.583244 | 7_1:-76232112 | None:intergenic |
| TTTCCTCCATCGCAAGCTCA+GGG | 0.583701 | 7_1:-76235458 | Msa1039100:CDS |
| TCGAGGTGGCCTAGAACCAC+CGG | 0.584989 | 7_1:+76235427 | None:intergenic |
| ATATTTGTAGCAGCATCTAT+GGG | 0.585347 | 7_1:-76232920 | Msa1039100:CDS |
| CAAATACTTCTCTGTACCGG+CGG | 0.587474 | 7_1:-76232765 | Msa1039100:CDS |
| GGCCGTTCCAGATCCACCAC+CGG | 0.597655 | 7_1:-76235654 | Msa1039100:CDS |
| CAGATGGGTGATTGCAGGTG+TGG | 0.599018 | 7_1:-76232565 | Msa1039100:CDS |
| AGGATTACGTATAGACAAAG+AGG | 0.600243 | 7_1:+76232788 | None:intergenic |
| GTCTACTTACAAATCAGGGT+TGG | 0.601290 | 7_1:+76234378 | None:intergenic |
| AGAGTGGTGCAAATCCAGAA+TGG | 0.616599 | 7_1:+76232944 | None:intergenic |
| AACTGTTGTTCACATTAACA+AGG | 0.618893 | 7_1:-76232163 | Msa1039100:three_prime_UTR |
| TCTTCTGATGAACCTCAGCA+GGG | 0.619382 | 7_1:-76234529 | Msa1039100:CDS |
| AAATACTTCTCTGTACCGGC+GGG | 0.619911 | 7_1:-76232764 | Msa1039100:CDS |
| ATATATAGCACACAAGCTGA+AGG | 0.625103 | 7_1:-76232885 | Msa1039100:CDS |
| AGGCCACCTCGAGATGCAGA+TGG | 0.625410 | 7_1:-76235416 | Msa1039100:intron |
| CGAAGCCAACCACCCTGCTG+AGG | 0.631145 | 7_1:+76234517 | None:intergenic |
| TGCTGCTACAAATATTAGAG+TGG | 0.638926 | 7_1:+76232928 | None:intergenic |
| TCTGATGAACCTCAGCAGGG+TGG | 0.640708 | 7_1:-76234526 | Msa1039100:CDS |
| CTTAAACGGATACCGTGAAG+AGG | 0.641911 | 7_1:+76232409 | None:intergenic |
| TCATGTCGGCAGGTGAAAGG+TGG | 0.649545 | 7_1:-76232494 | Msa1039100:CDS |
| ATACTTCGGATGTTCTAGAG+AGG | 0.653109 | 7_1:-76234453 | Msa1039100:CDS |
| AAAATACCATCTGCATCTCG+AGG | 0.655529 | 7_1:+76235410 | None:intergenic |
| GAAGGAAAGATGATGCAAGG+AGG | 0.657050 | 7_1:-76235818 | Msa1039100:exon |
| AATAGTTGAACAAGTCCCGC+CGG | 0.666349 | 7_1:+76232749 | None:intergenic |
| CCTTCGGGCACATATCATGT+CGG | 0.666772 | 7_1:-76232508 | Msa1039100:CDS |
| TTCCTCCATCGCAAGCTCAG+GGG | 0.676586 | 7_1:-76235457 | Msa1039100:CDS |
| ATACCATCTGCATCTCGAGG+TGG | 0.680065 | 7_1:+76235413 | None:intergenic |
| AGCTGGAATAAAGACAAACA+GGG | 0.694942 | 7_1:+76232709 | None:intergenic |
| GCTCAGGGGAAGATTACCGG+TGG | 0.714030 | 7_1:-76235443 | Msa1039100:CDS |
| GTGAACTTGACGGTGACCGG+TGG | 0.721035 | 7_1:+76235638 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATATATTTAAAGAATTAT+TGG | + | chr7_1:76233746-76233765 | None:intergenic | 10.0% |
| !! | TATAAGTGCTTAATTAAATT+GGG | + | chr7_1:76232862-76232881 | None:intergenic | 15.0% |
| !! | ATTAAATATTGTAGCTAAAT+TGG | - | chr7_1:76233828-76233847 | Msa1039100:intron | 15.0% |
| !! | ATAATAGAATTAGAGTATAA+CGG | + | chr7_1:76234793-76234812 | None:intergenic | 15.0% |
| !!! | TTTTTTATTATATTTGAGAC+CGG | + | chr7_1:76234883-76234902 | None:intergenic | 15.0% |
| !!! | CTTTTAGAAATTCATTAATT+CGG | - | chr7_1:76235735-76235754 | Msa1039100:intron | 15.0% |
| !!! | AATTAACCGATTCAATTAAA+CGG | - | chr7_1:76232493-76232512 | Msa1039100:CDS | 20.0% |
| !! | TACAGATCAAATATCAAAAT+TGG | + | chr7_1:76232750-76232769 | None:intergenic | 20.0% |
| !! | ATAAGTGCTTAATTAAATTG+GGG | + | chr7_1:76232861-76232880 | None:intergenic | 20.0% |
| !! | CTATAAGTGCTTAATTAAAT+TGG | + | chr7_1:76232863-76232882 | None:intergenic | 20.0% |
| !!! | GATTTTAGTTTTACTGATAT+TGG | - | chr7_1:76233144-76233163 | Msa1039100:intron | 20.0% |
| !! | TCAATATTCAATTTCAACTA+TGG | - | chr7_1:76233777-76233796 | Msa1039100:intron | 20.0% |
| !!! | ACTATCATCTACATTATTTT+AGG | + | chr7_1:76233875-76233894 | None:intergenic | 20.0% |
| !! | ATTGAAGAACTATAATACAT+TGG | - | chr7_1:76233898-76233917 | Msa1039100:intron | 20.0% |
| !!! | TATTATGTTTTCCCTTTATT+TGG | - | chr7_1:76233946-76233965 | Msa1039100:intron | 20.0% |
| !! | CTATATGAACTAACATAATT+TGG | - | chr7_1:76234473-76234492 | Msa1039100:CDS | 20.0% |
| !! | ATATCAGAAATAAGTATTAG+TGG | + | chr7_1:76234659-76234678 | None:intergenic | 20.0% |
| !!! | CTAATACTTATTTCTGATAT+AGG | - | chr7_1:76234659-76234678 | Msa1039100:intron | 20.0% |
| !! | TATACTCTAATTCTATTATC+TGG | - | chr7_1:76234794-76234813 | Msa1039100:intron | 20.0% |
| !!! | TTTAGTCTCTTTTTTATTTG+TGG | - | chr7_1:76234825-76234844 | Msa1039100:intron | 20.0% |
| !!! | TATTTTATATAGTACTACTC+CGG | + | chr7_1:76234997-76235016 | None:intergenic | 20.0% |
| !! | AGTAGTACTATATAAAATAC+TGG | - | chr7_1:76234998-76235017 | Msa1039100:intron | 20.0% |
| !! | ATGAAATATATATACGATGA+AGG | - | chr7_1:76235698-76235717 | Msa1039100:intron | 20.0% |
| !! | CGAATTAATGAATTTCTAAA+AGG | + | chr7_1:76235737-76235756 | None:intergenic | 20.0% |
| !! | TTTGTTTCATAATGCAATTA+TGG | - | chr7_1:76235838-76235857 | Msa1039100:five_prime_UTR | 20.0% |
| ! | AAAGAAGAGAAAAGTTATAC+AGG | + | chr7_1:76232319-76232338 | None:intergenic | 25.0% |
| ! | CAGAAAGAAAAAGAAAAGAA+AGG | + | chr7_1:76232347-76232366 | None:intergenic | 25.0% |
| ! | GAAATCAGAATGATAGAATT+TGG | + | chr7_1:76232371-76232390 | None:intergenic | 25.0% |
| ! | GATTATTGTGATTAAAAGAC+TGG | + | chr7_1:76232721-76232740 | None:intergenic | 25.0% |
| ! | CATTGAGGTAATTAATTTCA+TGG | + | chr7_1:76232821-76232840 | None:intergenic | 25.0% |
| ! | CATGAAATTAATTACCTCAA+TGG | - | chr7_1:76232819-76232838 | Msa1039100:CDS | 25.0% |
| !! | AGCTATAAACCATTTTCATA+AGG | - | chr7_1:76232958-76232977 | Msa1039100:intron | 25.0% |
| ! | TCATATTTACTTGATATGCA+CGG | - | chr7_1:76233265-76233284 | Msa1039100:intron | 25.0% |
| !! | AAAATTTCTAGAAGCACAAA+AGG | + | chr7_1:76233405-76233424 | None:intergenic | 25.0% |
| !!! | TTGTGCTTCTAGAAATTTTA+TGG | - | chr7_1:76233406-76233425 | Msa1039100:intron | 25.0% |
| ! | AATAAAATGAGCAACAGAAA+AGG | + | chr7_1:76233712-76233731 | None:intergenic | 25.0% |
| ! | ATTCAATTTCAACTATGGTT+TGG | - | chr7_1:76233782-76233801 | Msa1039100:intron | 25.0% |
| !!! | TATAATACATTGGTGGTTTT+GGG | - | chr7_1:76233908-76233927 | Msa1039100:intron | 25.0% |
| ! | GCGAATATATAATAACCTAT+TGG | + | chr7_1:76234082-76234101 | None:intergenic | 25.0% |
| ! | TAGAAAACATAAGAACTAAC+AGG | + | chr7_1:76234119-76234138 | None:intergenic | 25.0% |
| !! | TCTTTTGATCATCATTGTAT+TGG | - | chr7_1:76234307-76234326 | Msa1039100:intron | 25.0% |
| !! | TCTTTTGATCATCATTGTAT+TGG | - | chr7_1:76234307-76234326 | Msa1039100:intron | 25.0% |
| ! | AACATAATTTGGAGATTACA+AGG | - | chr7_1:76234484-76234503 | Msa1039100:CDS | 25.0% |
| !! | AAAAGCAACTTTTCCTTTTA+GGG | - | chr7_1:76234528-76234547 | Msa1039100:CDS | 25.0% |
| !! | ACTATAGAAGTATAGTCTAT+GGG | + | chr7_1:76234630-76234649 | None:intergenic | 25.0% |
| ! | AGAAAAGACTACAATTGTTA+AGG | + | chr7_1:76234729-76234748 | None:intergenic | 25.0% |
| !! | TCAAACAAAGTTGAAGTATT+TGG | + | chr7_1:76234947-76234966 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTATATTTGAGAC+CGG | - | chr7_1:76234975-76234994 | Msa1039100:intron | 25.0% |
| ! | TTTGTGTAATCATTCGTTTA+TGG | - | chr7_1:76235789-76235808 | Msa1039100:CDS | 25.0% |
| ! | AACTGAAAATTTGTCTTCAA+AGG | + | chr7_1:76235937-76235956 | None:intergenic | 25.0% |
| AAGAAAAAGAGATAGATCTG+TGG | - | chr7_1:76232211-76232230 | Msa1039100:three_prime_UTR | 30.0% | |
| TAACAGAATGAGAATGCAAT+TGG | + | chr7_1:76232474-76232493 | None:intergenic | 30.0% | |
| AGTGATCCGTTTAATTGAAT+CGG | + | chr7_1:76232502-76232521 | None:intergenic | 30.0% | |
| !! | ACCATTTTCATAAGGTATCT+TGG | - | chr7_1:76232966-76232985 | Msa1039100:intron | 30.0% |
| TCCAAGATACCTTATGAAAA+TGG | + | chr7_1:76232970-76232989 | None:intergenic | 30.0% | |
| ATAAGCTAAAAAACAACTCG+TGG | - | chr7_1:76233003-76233022 | Msa1039100:intron | 30.0% | |
| AGATGACATCAAACTTCAAA+GGG | - | chr7_1:76233116-76233135 | Msa1039100:intron | 30.0% | |
| CATATTTACTTGATATGCAC+GGG | - | chr7_1:76233266-76233285 | Msa1039100:intron | 30.0% | |
| ATACTTTGATGTCGATACTT+CGG | - | chr7_1:76233598-76233617 | Msa1039100:intron | 30.0% | |
| TCATTAAAAGTTCCTCTGAA+TGG | + | chr7_1:76233656-76233675 | None:intergenic | 30.0% | |
| AAAGGTCTACTTACAAATCA+GGG | + | chr7_1:76233694-76233713 | None:intergenic | 30.0% | |
| AAAAGGTCTACTTACAAATC+AGG | + | chr7_1:76233695-76233714 | None:intergenic | 30.0% | |
| GAAGAACTATAATACATTGG+TGG | - | chr7_1:76233901-76233920 | Msa1039100:intron | 30.0% | |
| !! | CTATAATACATTGGTGGTTT+TGG | - | chr7_1:76233907-76233926 | Msa1039100:intron | 30.0% |
| !! | TATGTTTTCCCTTTATTTGG+CGG | - | chr7_1:76233949-76233968 | Msa1039100:intron | 30.0% |
| ! | CAATGTGAAGAAGTATATCT+CGG | - | chr7_1:76234014-76234033 | Msa1039100:intron | 30.0% |
| CAATATCTTGTATTGCCAAT+AGG | - | chr7_1:76234064-76234083 | Msa1039100:intron | 30.0% | |
| TAAGAACTAACAGGTTTACT+TGG | + | chr7_1:76234110-76234129 | None:intergenic | 30.0% | |
| ! | TCATGAACAGGATCTTTTTA+GGG | + | chr7_1:76234273-76234292 | None:intergenic | 30.0% |
| ! | TTCATGAACAGGATCTTTTT+AGG | + | chr7_1:76234274-76234293 | None:intergenic | 30.0% |
| ! | TCATGAACAGGATCTTTTTA+GGG | + | chr7_1:76234273-76234292 | None:intergenic | 30.0% |
| ! | TTCATGAACAGGATCTTTTT+AGG | + | chr7_1:76234274-76234293 | None:intergenic | 30.0% |
| ! | TATAGGAACTGATTCTAACA+TGG | + | chr7_1:76234422-76234441 | None:intergenic | 30.0% |
| !! | CTAAAAGGAAAAGTTGCTTT+TGG | + | chr7_1:76234529-76234548 | None:intergenic | 30.0% |
| ! | CAAAAGCAACTTTTCCTTTT+AGG | - | chr7_1:76234527-76234546 | Msa1039100:CDS | 30.0% |
| ! | GACTATAGAAGTATAGTCTA+TGG | + | chr7_1:76234631-76234650 | None:intergenic | 30.0% |
| ! | AATTGTAGTCTTTTCTTGCT+TGG | - | chr7_1:76234733-76234752 | Msa1039100:intron | 30.0% |
| ACTCTAATTCTATTATCTGG+TGG | - | chr7_1:76234797-76234816 | Msa1039100:intron | 30.0% | |
| ATTTGTGGAAACATCATATG+TGG | - | chr7_1:76234840-76234859 | Msa1039100:intron | 30.0% | |
| ! | TTATTATATTTGAGACCGGA+GGG | + | chr7_1:76234879-76234898 | None:intergenic | 30.0% |
| ! | TTTATTATATTTGAGACCGG+AGG | + | chr7_1:76234880-76234899 | None:intergenic | 30.0% |
| !!! | AATACTGGTTTTCTAAGAAG+AGG | - | chr7_1:76235013-76235032 | Msa1039100:intron | 30.0% |
| !!! | TGCCAGTTTTTTAACTTTAG+AGG | - | chr7_1:76235040-76235059 | Msa1039100:intron | 30.0% |
| !!! | GCCAGTTTTTTAACTTTAGA+GGG | - | chr7_1:76235041-76235060 | Msa1039100:intron | 30.0% |
| !! | TCCCTCTAAAGTTAAAAAAC+TGG | + | chr7_1:76235045-76235064 | None:intergenic | 30.0% |
| AATATTTGTAGCAGCATCTA+TGG | - | chr7_1:76235144-76235163 | Msa1039100:intron | 30.0% | |
| ATATTTGTAGCAGCATCTAT+GGG | - | chr7_1:76235145-76235164 | Msa1039100:intron | 30.0% | |
| AACAAAAGGTTTCACATTTC+AGG | + | chr7_1:76235443-76235462 | None:intergenic | 30.0% | |
| ATTAAAGATCTACCTCTTCA+CGG | - | chr7_1:76235644-76235663 | Msa1039100:CDS | 30.0% | |
| ! | ACGATGAAGGAATAACTTTT+TGG | - | chr7_1:76235711-76235730 | Msa1039100:intron | 30.0% |
| TGCATTATGAAACAAATCAC+AGG | + | chr7_1:76235834-76235853 | None:intergenic | 30.0% | |
| TGCGTTATGAAAAAAATCAC+AGG | + | chr7_1:76235883-76235902 | None:intergenic | 30.0% | |
| AACTGTTGTTCACATTAACA+AGG | - | chr7_1:76235902-76235921 | Msa1039100:five_prime_UTR | 30.0% | |
| ! | ATTGATAGTCAACAGCTTCA+AGG | - | chr7_1:76232286-76232305 | Msa1039100:three_prime_UTR | 35.0% |
| CACTTAATCTCGTTTCTTTC+AGG | - | chr7_1:76232390-76232409 | Msa1039100:three_prime_UTR | 35.0% | |
| AGCAACTATTAACACCATTG+AGG | + | chr7_1:76232836-76232855 | None:intergenic | 35.0% | |
| AAGTCCTTGTAAGACTGTTT+GGG | + | chr7_1:76233058-76233077 | None:intergenic | 35.0% | |
| TAAGTCCTTGTAAGACTGTT+TGG | + | chr7_1:76233059-76233078 | None:intergenic | 35.0% | |
| GCTAGTCGATAAATTCAAAC+AGG | - | chr7_1:76233080-76233099 | Msa1039100:intron | 35.0% | |
| GAGATGACATCAAACTTCAA+AGG | - | chr7_1:76233115-76233134 | Msa1039100:intron | 35.0% | |
| ! | AGATTCAGTTGTGTGTTACT+TGG | + | chr7_1:76233202-76233221 | None:intergenic | 35.0% |
| GGAATTTAGAAAGATGTGAC+TGG | - | chr7_1:76233327-76233346 | Msa1039100:intron | 35.0% | |
| TCTGCATAAAATGAGTCACA+TGG | + | chr7_1:76233491-76233510 | None:intergenic | 35.0% | |
| ! | TCATTTTCAAAACCTGCATC+TGG | - | chr7_1:76233512-76233531 | Msa1039100:intron | 35.0% |
| !! | GAAGTATCGACATCAAAGTA+TGG | + | chr7_1:76233599-76233618 | None:intergenic | 35.0% |
| !!! | GATTCACTTTTTCCATTCAG+AGG | - | chr7_1:76233641-76233660 | Msa1039100:intron | 35.0% |
| CGTTGTTTATGCATATTAGC+CGG | - | chr7_1:76234176-76234195 | Msa1039100:intron | 35.0% | |
| AAGTGAACTGAGTATAGTCA+GGG | - | chr7_1:76234201-76234220 | Msa1039100:intron | 35.0% | |
| AAGATCCTGTTCATGAAACA+TGG | - | chr7_1:76234277-76234296 | Msa1039100:intron | 35.0% | |
| AGATCCTGTTCATGAAACAT+GGG | - | chr7_1:76234278-76234297 | Msa1039100:intron | 35.0% | |
| AAGATCCTGTTCATGAAACA+TGG | - | chr7_1:76234277-76234296 | Msa1039100:intron | 35.0% | |
| AGATCCTGTTCATGAAACAT+GGG | - | chr7_1:76234278-76234297 | Msa1039100:intron | 35.0% | |
| TAACATGGACAAGTGTTACA+AGG | + | chr7_1:76234407-76234426 | None:intergenic | 35.0% | |
| TCCTATATAGTCACTATTCC+AGG | - | chr7_1:76234435-76234454 | Msa1039100:CDS | 35.0% | |
| CCTATATAGTCACTATTCCA+GGG | - | chr7_1:76234436-76234455 | Msa1039100:CDS | 35.0% | |
| !! | TTCCTTTTAGGGATTCAAAC+CGG | - | chr7_1:76234539-76234558 | Msa1039100:CDS | 35.0% |
| CAAAACTGGTGCATATTACT+GGG | - | chr7_1:76234586-76234605 | Msa1039100:intron | 35.0% | |
| GCATATTACTGGGACTAAAT+AGG | - | chr7_1:76234596-76234615 | Msa1039100:intron | 35.0% | |
| CCTAAATGCTTGAATGGTAA+CGG | - | chr7_1:76234691-76234710 | Msa1039100:intron | 35.0% | |
| AGTATAACGGTTAGTAGTCA+TGG | + | chr7_1:76234780-76234799 | None:intergenic | 35.0% | |
| ACCATAATTGTACTCAGGTA+TGG | - | chr7_1:76235097-76235116 | Msa1039100:intron | 35.0% | |
| TCCATACCTGAGTACAATTA+TGG | + | chr7_1:76235101-76235120 | None:intergenic | 35.0% | |
| TGCTGCTACAAATATTAGAG+TGG | + | chr7_1:76235140-76235159 | None:intergenic | 35.0% | |
| ATATATAGCACACAAGCTGA+AGG | - | chr7_1:76235180-76235199 | Msa1039100:intron | 35.0% | |
| ATGGGACTATGACATAAATC+TGG | - | chr7_1:76235210-76235229 | Msa1039100:intron | 35.0% | |
| ATGACATAAATCTGGTGACT+TGG | - | chr7_1:76235218-76235237 | Msa1039100:intron | 35.0% | |
| GTATAGACAAAGAGGAATGA+TGG | + | chr7_1:76235272-76235291 | None:intergenic | 35.0% | |
| AGGATTACGTATAGACAAAG+AGG | + | chr7_1:76235280-76235299 | None:intergenic | 35.0% | |
| GTTCAACTATTCTGCCTATA+TGG | - | chr7_1:76235328-76235347 | Msa1039100:intron | 35.0% | |
| CAAACAGGGAATATCCATAT+AGG | + | chr7_1:76235345-76235364 | None:intergenic | 35.0% | |
| AGCTGGAATAAAGACAAACA+GGG | + | chr7_1:76235359-76235378 | None:intergenic | 35.0% | |
| CAAACACTGCACAAAACAAA+AGG | + | chr7_1:76235457-76235476 | None:intergenic | 35.0% | |
| GAATATATCCAATGGGACAA+TGG | + | chr7_1:76235481-76235500 | None:intergenic | 35.0% | |
| TCCCATTGGATATATTCAGA+TGG | - | chr7_1:76235484-76235503 | Msa1039100:intron | 35.0% | |
| CCCATCTGAATATATCCAAT+GGG | + | chr7_1:76235488-76235507 | None:intergenic | 35.0% | |
| CCCATTGGATATATTCAGAT+GGG | - | chr7_1:76235485-76235504 | Msa1039100:intron | 35.0% | |
| ACCCATCTGAATATATCCAA+TGG | + | chr7_1:76235489-76235508 | None:intergenic | 35.0% | |
| ! | TGGTATTTTTCTGTTGCAGT+TGG | - | chr7_1:76235608-76235627 | Msa1039100:intron | 35.0% |
| CAATCCAGTTTCCTCTTAAA+CGG | + | chr7_1:76235673-76235692 | None:intergenic | 35.0% | |
| TCACATTAACAAGGCAACTT+AGG | - | chr7_1:76235911-76235930 | Msa1039100:five_prime_UTR | 35.0% | |
| TTCAGTTAACCTCTTGATGT+TGG | - | chr7_1:76235950-76235969 | Msa1039100:five_prime_UTR | 35.0% | |
| TCAGTTAACCTCTTGATGTT+GGG | - | chr7_1:76235951-76235970 | Msa1039100:five_prime_UTR | 35.0% | |
| TGTGGATCTGAAGAAGAAGA+AGG | - | chr7_1:76232229-76232248 | Msa1039100:three_prime_UTR | 40.0% | |
| GAAGAAGGAAAGATGATGCA+AGG | - | chr7_1:76232244-76232263 | Msa1039100:three_prime_UTR | 40.0% | |
| AACGGATCACTTTCCATTGT+CGG | - | chr7_1:76232511-76232530 | Msa1039100:CDS | 40.0% | |
| AATGAAATTCGCGCTACTTG+CGG | + | chr7_1:76232540-76232559 | None:intergenic | 40.0% | |
| AAAATACCATCTGCATCTCG+AGG | + | chr7_1:76232658-76232677 | None:intergenic | 40.0% | |
| TTCATGGTGACTAGCAATGA+TGG | + | chr7_1:76232805-76232824 | None:intergenic | 40.0% | |
| TTCAAACAGGTCCATAGTAG+AGG | - | chr7_1:76233093-76233112 | Msa1039100:intron | 40.0% | |
| TGATGTCATCTCCTCTACTA+TGG | + | chr7_1:76233107-76233126 | None:intergenic | 40.0% | |
| CATCAAACTTCAAAGGGACT+TGG | - | chr7_1:76233122-76233141 | Msa1039100:intron | 40.0% | |
| CTGATATTGGAGATACTCGA+CGG | - | chr7_1:76233157-76233176 | Msa1039100:intron | 40.0% | |
| TGATATTGGAGATACTCGAC+GGG | - | chr7_1:76233158-76233177 | Msa1039100:intron | 40.0% | |
| TTCTGTGTGTGAATGTCTGA+TGG | - | chr7_1:76233306-76233325 | Msa1039100:intron | 40.0% | |
| AGAAAGATGTGACTGGAAGA+AGG | - | chr7_1:76233334-76233353 | Msa1039100:intron | 40.0% | |
| ACTGGAAGAAGGAACTGTAA+GGG | - | chr7_1:76233345-76233364 | Msa1039100:intron | 40.0% | |
| AAGGAACTGTAAGGGAAACA+TGG | - | chr7_1:76233353-76233372 | Msa1039100:intron | 40.0% | |
| AGGAACTGTAAGGGAAACAT+GGG | - | chr7_1:76233354-76233373 | Msa1039100:intron | 40.0% | |
| !! | ATACTTCGGATGTTCTAGAG+AGG | - | chr7_1:76233612-76233631 | Msa1039100:intron | 40.0% |
| GTCTACTTACAAATCAGGGT+TGG | + | chr7_1:76233690-76233709 | None:intergenic | 40.0% | |
| GTAGCTAAATTGGTGAGTTG+TGG | - | chr7_1:76233838-76233857 | Msa1039100:intron | 40.0% | |
| !!! | CATTATTTTAGGACTGCCAG+TGG | + | chr7_1:76233864-76233883 | None:intergenic | 40.0% |
| CTATACTCAGTTCACTTCTC+CGG | + | chr7_1:76234198-76234217 | None:intergenic | 40.0% | |
| GAAGTGAACTGAGTATAGTC+AGG | - | chr7_1:76234200-76234219 | Msa1039100:intron | 40.0% | |
| AACTCCCATGTTTCATGAAC+AGG | + | chr7_1:76234285-76234304 | None:intergenic | 40.0% | |
| AACTCCCATGTTTCATGAAC+AGG | + | chr7_1:76234285-76234304 | None:intergenic | 40.0% | |
| CCCTGGAATAGTGACTATAT+AGG | + | chr7_1:76234439-76234458 | None:intergenic | 40.0% | |
| TAGTCATAGATGTTAGTCCC+TGG | + | chr7_1:76234456-76234475 | None:intergenic | 40.0% | |
| CAAGGACTTGAACCAAAACA+AGG | - | chr7_1:76234502-76234521 | Msa1039100:CDS | 40.0% | |
| !!! | GTTGCTTTTGGTCCTTGTTT+TGG | + | chr7_1:76234517-76234536 | None:intergenic | 40.0% |
| !! | TCCTTTTAGGGATTCAAACC+GGG | - | chr7_1:76234540-76234559 | Msa1039100:CDS | 40.0% |
| AAACCGGGTAGAATGTTGTA+GGG | - | chr7_1:76234555-76234574 | Msa1039100:CDS | 40.0% | |
| AATCCCTACAACATTCTACC+CGG | + | chr7_1:76234561-76234580 | None:intergenic | 40.0% | |
| GTAGGGATTAAAGCCAAAAC+TGG | - | chr7_1:76234572-76234591 | Msa1039100:intron | 40.0% | |
| ! | CCAGTAATATGCACCAGTTT+TGG | + | chr7_1:76234588-76234607 | None:intergenic | 40.0% |
| CCAAAACTGGTGCATATTAC+TGG | - | chr7_1:76234585-76234604 | Msa1039100:intron | 40.0% | |
| TCCACTCCTAAATGCTTGAA+TGG | - | chr7_1:76234685-76234704 | Msa1039100:intron | 40.0% | |
| ACCATTCAAGCATTTAGGAG+TGG | + | chr7_1:76234689-76234708 | None:intergenic | 40.0% | |
| CCGTTACCATTCAAGCATTT+AGG | + | chr7_1:76234694-76234713 | None:intergenic | 40.0% | |
| AGCTCACCATAATTGTACTC+AGG | - | chr7_1:76235092-76235111 | Msa1039100:intron | 40.0% | |
| ACAAGCTGAAGGATCAGAAA+TGG | - | chr7_1:76235191-76235210 | Msa1039100:intron | 40.0% | |
| CAAGCTGAAGGATCAGAAAT+GGG | - | chr7_1:76235192-76235211 | Msa1039100:intron | 40.0% | |
| !!! | TGGTCTGCTGGTTTGTTTTA+TGG | - | chr7_1:76235238-76235257 | Msa1039100:intron | 40.0% |
| CCTCAAATACTTCTCTGTAC+CGG | - | chr7_1:76235297-76235316 | Msa1039100:intron | 40.0% | |
| GAGCTGGAATAAAGACAAAC+AGG | + | chr7_1:76235360-76235379 | None:intergenic | 40.0% | |
| GTTTGTCTTTATTCCAGCTC+TGG | - | chr7_1:76235360-76235379 | Msa1039100:intron | 40.0% | |
| ATATTCAGATGGGTGATTGC+AGG | - | chr7_1:76235495-76235514 | Msa1039100:intron | 40.0% | |
| GTTCATGTCAGCAACATTTG+TGG | - | chr7_1:76235527-76235546 | Msa1039100:intron | 40.0% | |
| CATTTGTGGCACTTAACCTT+CGG | - | chr7_1:76235541-76235560 | Msa1039100:intron | 40.0% | |
| ATTTGTGGCACTTAACCTTC+GGG | - | chr7_1:76235542-76235561 | Msa1039100:intron | 40.0% | |
| GTATCCGTTTAAGAGGAAAC+TGG | - | chr7_1:76235666-76235685 | Msa1039100:intron | 40.0% | |
| GAAGGAAAGATGATGCAAGG+AGG | - | chr7_1:76232247-76232266 | Msa1039100:three_prime_UTR | 45.0% | |
| GTTCGTACCAGTGAACTTGA+CGG | + | chr7_1:76232440-76232459 | None:intergenic | 45.0% | |
| CTCTCCCAAACAGTCTTACA+AGG | - | chr7_1:76233051-76233070 | Msa1039100:intron | 45.0% | |
| GACTGGAAGAAGGAACTGTA+AGG | - | chr7_1:76233344-76233363 | Msa1039100:intron | 45.0% | |
| TCATCAGAAGAACCAGATGC+AGG | + | chr7_1:76233527-76233546 | None:intergenic | 45.0% | |
| TTCTTCTGATGAACCTCAGC+AGG | - | chr7_1:76233535-76233554 | Msa1039100:intron | 45.0% | |
| TCTTCTGATGAACCTCAGCA+GGG | - | chr7_1:76233536-76233555 | Msa1039100:intron | 45.0% | |
| ! | ACCCGGTTTGAATCCCTAAA+AGG | + | chr7_1:76234544-76234563 | None:intergenic | 45.0% |
| CAAACCGGGTAGAATGTTGT+AGG | - | chr7_1:76234554-76234573 | Msa1039100:CDS | 45.0% | |
| ! | GGCCTAATTTTTACTCCCTC+CGG | - | chr7_1:76234861-76234880 | Msa1039100:intron | 45.0% |
| GACCGGAGGGAGTAAAAATT+AGG | + | chr7_1:76234866-76234885 | None:intergenic | 45.0% | |
| TACTCAGGTATGGACCATTC+TGG | - | chr7_1:76235107-76235126 | Msa1039100:intron | 45.0% | |
| AGAGTGGTGCAAATCCAGAA+TGG | + | chr7_1:76235124-76235143 | None:intergenic | 45.0% | |
| !! | CCGGTACAGAGAAGTATTTG+AGG | + | chr7_1:76235300-76235319 | None:intergenic | 45.0% |
| CAAATACTTCTCTGTACCGG+CGG | - | chr7_1:76235300-76235319 | Msa1039100:intron | 45.0% | |
| ! | AAATACTTCTCTGTACCGGC+GGG | - | chr7_1:76235301-76235320 | Msa1039100:intron | 45.0% |
| AATAGTTGAACAAGTCCCGC+CGG | + | chr7_1:76235319-76235338 | None:intergenic | 45.0% | |
| GTGTTTGTCCATTGTCCCAT+TGG | - | chr7_1:76235470-76235489 | Msa1039100:CDS | 45.0% | |
| ATATCATGTCGGCAGGTGAA+AGG | - | chr7_1:76235568-76235587 | Msa1039100:intron | 45.0% | |
| AGGTGGTTCTTCATTGTTGC+TGG | - | chr7_1:76235588-76235607 | Msa1039100:intron | 45.0% | |
| CTTAAACGGATACCGTGAAG+AGG | + | chr7_1:76235659-76235678 | None:intergenic | 45.0% | |
| CTTCACGGTATCCGTTTAAG+AGG | - | chr7_1:76235659-76235678 | Msa1039100:intron | 45.0% | |
| GGAAAGATGATGCAAGGAGG+AGG | - | chr7_1:76232250-76232269 | Msa1039100:three_prime_UTR | 50.0% | |
| CTACTTGCGGAATCCGACAA+TGG | + | chr7_1:76232527-76232546 | None:intergenic | 50.0% | |
| ATTTCCTCCATCGCAAGCTC+AGG | - | chr7_1:76232606-76232625 | Msa1039100:intron | 50.0% | |
| TTTCCTCCATCGCAAGCTCA+GGG | - | chr7_1:76232607-76232626 | Msa1039100:intron | 50.0% | |
| CAAGCTCAGGGGAAGATTAC+CGG | - | chr7_1:76232619-76232638 | Msa1039100:intron | 50.0% | |
| GGAAGATTACCGGTGGTTCT+AGG | - | chr7_1:76232629-76232648 | Msa1039100:intron | 50.0% | |
| ATACCATCTGCATCTCGAGG+TGG | + | chr7_1:76232655-76232674 | None:intergenic | 50.0% | |
| AATTGGTGAGTTGTGGCCAC+TGG | - | chr7_1:76233845-76233864 | Msa1039100:intron | 50.0% | |
| CCAGCTCACCGCCAAATAAA+GGG | + | chr7_1:76233960-76233979 | None:intergenic | 50.0% | |
| ! | CCTTTATTTGGCGGTGAGCT+GGG | - | chr7_1:76233958-76233977 | Msa1039100:intron | 50.0% |
| ! | CTTTATTTGGCGGTGAGCTG+GGG | - | chr7_1:76233959-76233978 | Msa1039100:intron | 50.0% |
| ! | GTCTTTTCTTGCTTGGCTGC+TGG | - | chr7_1:76234740-76234759 | Msa1039100:intron | 50.0% |
| !! | AATCTGGTGACTTGGTCTGC+TGG | - | chr7_1:76235226-76235245 | Msa1039100:intron | 50.0% |
| GAGAAGCAACTTACCAGAGC+TGG | + | chr7_1:76235376-76235395 | None:intergenic | 50.0% | |
| CCTTCGGGCACATATCATGT+CGG | - | chr7_1:76235557-76235576 | Msa1039100:intron | 50.0% | |
| !! | TCTGTTGCAGTTGGCTCTAG+CGG | - | chr7_1:76235617-76235636 | Msa1039100:intron | 50.0% |
| CCAGTGAACTTGACGGTGAC+CGG | + | chr7_1:76232433-76232452 | None:intergenic | 55.0% | |
| TTCCTCCATCGCAAGCTCAG+GGG | - | chr7_1:76232608-76232627 | Msa1039100:intron | 55.0% | |
| ATCTTCCCCTGAGCTTGCGA+TGG | + | chr7_1:76232616-76232635 | None:intergenic | 55.0% | |
| TCTGATGAACCTCAGCAGGG+TGG | - | chr7_1:76233539-76233558 | Msa1039100:intron | 55.0% | |
| ATGAACCTCAGCAGGGTGGT+TGG | - | chr7_1:76233543-76233562 | Msa1039100:intron | 55.0% | |
| ! | CCCTTTATTTGGCGGTGAGC+TGG | - | chr7_1:76233957-76233976 | Msa1039100:intron | 55.0% |
| CCCAGCTCACCGCCAAATAA+AGG | + | chr7_1:76233961-76233980 | None:intergenic | 55.0% | |
| CAGATGGGTGATTGCAGGTG+TGG | - | chr7_1:76235500-76235519 | Msa1039100:intron | 55.0% | |
| CCGACATGATATGTGCCCGA+AGG | + | chr7_1:76235560-76235579 | None:intergenic | 55.0% | |
| TCATGTCGGCAGGTGAAAGG+TGG | - | chr7_1:76235571-76235590 | Msa1039100:intron | 55.0% | |
| !! | GACCGGTGGTGGATCTGGAA+CGG | + | chr7_1:76232416-76232435 | None:intergenic | 60.0% |
| AACTTGACGGTGACCGGTGG+TGG | + | chr7_1:76232427-76232446 | None:intergenic | 60.0% | |
| GTGAACTTGACGGTGACCGG+TGG | + | chr7_1:76232430-76232449 | None:intergenic | 60.0% | |
| CCGGTCACCGTCAAGTTCAC+TGG | - | chr7_1:76232430-76232449 | Msa1039100:CDS | 60.0% | |
| TTCCCCTGAGCTTGCGATGG+AGG | + | chr7_1:76232613-76232632 | None:intergenic | 60.0% | |
| GCTCAGGGGAAGATTACCGG+TGG | - | chr7_1:76232622-76232641 | Msa1039100:intron | 60.0% | |
| TCGAGGTGGCCTAGAACCAC+CGG | + | chr7_1:76232641-76232660 | None:intergenic | 60.0% | |
| AGGCCACCTCGAGATGCAGA+TGG | - | chr7_1:76232649-76232668 | Msa1039100:intron | 60.0% | |
| !! | CTCAGCAGGGTGGTTGGCTT+CGG | - | chr7_1:76233549-76233568 | Msa1039100:intron | 60.0% |
| TGGGTGATTGCAGGTGTGGC+AGG | - | chr7_1:76235504-76235523 | Msa1039100:intron | 60.0% | |
| GGGTGATTGCAGGTGTGGCA+GGG | - | chr7_1:76235505-76235524 | Msa1039100:intron | 60.0% | |
| CGGGCACATATCATGTCGGC+AGG | - | chr7_1:76235561-76235580 | Msa1039100:intron | 60.0% | |
| GGCCGTTCCAGATCCACCAC+CGG | - | chr7_1:76232411-76232430 | Msa1039100:CDS | 65.0% | |
| !! | ACGGTGACCGGTGGTGGATC+TGG | + | chr7_1:76232421-76232440 | None:intergenic | 65.0% |
| CGAAGCCAACCACCCTGCTG+AGG | + | chr7_1:76233551-76233570 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 76232113 | 76235974 | 76232113 | ID=Msa1039100;Name=Msa1039100 |
| chr7_1 | mRNA | 76232113 | 76235974 | 76232113 | ID=Msa1039100-mRNA-1;Parent=Msa1039100;Name=Msa1039100-mRNA-1;_AED=0.05;_eAED=0.05;_QI=143|1|1|1|1|1|6|297|282 |
| chr7_1 | exon | 76232113 | 76232616 | 76232113 | ID=Msa1039100-mRNA-1:exon:19736;Parent=Msa1039100-mRNA-1 |
| chr7_1 | exon | 76232706 | 76232973 | 76232706 | ID=Msa1039100-mRNA-1:exon:19735;Parent=Msa1039100-mRNA-1 |
| chr7_1 | exon | 76234388 | 76234577 | 76234388 | ID=Msa1039100-mRNA-1:exon:19734;Parent=Msa1039100-mRNA-1 |
| chr7_1 | exon | 76235417 | 76235497 | 76235417 | ID=Msa1039100-mRNA-1:exon:19733;Parent=Msa1039100-mRNA-1 |
| chr7_1 | exon | 76235636 | 76235675 | 76235636 | ID=Msa1039100-mRNA-1:exon:19732;Parent=Msa1039100-mRNA-1 |
| chr7_1 | exon | 76235769 | 76235974 | 76235769 | ID=Msa1039100-mRNA-1:exon:19731;Parent=Msa1039100-mRNA-1 |
| chr7_1 | five_prime_UTR | 76235832 | 76235974 | 76235832 | ID=Msa1039100-mRNA-1:five_prime_utr;Parent=Msa1039100-mRNA-1 |
| chr7_1 | CDS | 76235769 | 76235831 | 76235769 | ID=Msa1039100-mRNA-1:cds;Parent=Msa1039100-mRNA-1 |
| chr7_1 | CDS | 76235636 | 76235675 | 76235636 | ID=Msa1039100-mRNA-1:cds;Parent=Msa1039100-mRNA-1 |
| chr7_1 | CDS | 76235417 | 76235497 | 76235417 | ID=Msa1039100-mRNA-1:cds;Parent=Msa1039100-mRNA-1 |
| chr7_1 | CDS | 76234388 | 76234577 | 76234388 | ID=Msa1039100-mRNA-1:cds;Parent=Msa1039100-mRNA-1 |
| chr7_1 | CDS | 76232706 | 76232973 | 76232706 | ID=Msa1039100-mRNA-1:cds;Parent=Msa1039100-mRNA-1 |
| chr7_1 | CDS | 76232410 | 76232616 | 76232410 | ID=Msa1039100-mRNA-1:cds;Parent=Msa1039100-mRNA-1 |
| chr7_1 | three_prime_UTR | 76232113 | 76232409 | 76232113 | ID=Msa1039100-mRNA-1:three_prime_utr;Parent=Msa1039100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
