Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187540 | XP_003626432.1 | 97.093 | 344 | 9 | 1 | 1 | 344 | 1 | 343 | 0.0 | 693 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187540 | sp|C6TBN2|AKR1_SOYBN | 68.529 | 340 | 106 | 1 | 4 | 343 | 2 | 340 | 1.44e-172 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187540 | G7L1V2 | 97.093 | 344 | 9 | 1 | 1 | 344 | 1 | 343 | 0.0 | 693 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044160 | Msa0187540 | 0.802553 | 5.310843e-49 | -8.615850e-47 |
| Msa0046870 | Msa0187540 | 0.969131 | 1.129595e-129 | -8.615850e-47 |
| Msa0060670 | Msa0187540 | 0.819727 | 9.975780e-53 | -8.615850e-47 |
| Msa0063940 | Msa0187540 | 0.805074 | 1.591132e-49 | -8.615850e-47 |
| Msa0099700 | Msa0187540 | 0.809389 | 1.938392e-50 | -8.615850e-47 |
| Msa0105410 | Msa0187540 | 0.806505 | 7.962375e-50 | -8.615850e-47 |
| Msa0148320 | Msa0187540 | 0.816122 | 6.505573e-52 | -8.615850e-47 |
| Msa0151660 | Msa0187540 | 0.801068 | 1.071838e-48 | -8.615850e-47 |
| Msa0187540 | Msa0217060 | 0.826937 | 2.061588e-54 | -8.615850e-47 |
| Msa0187540 | Msa0235290 | 0.817562 | 3.092533e-52 | -8.615850e-47 |
| Msa0187540 | Msa0256920 | 0.828092 | 1.089211e-54 | -8.615850e-47 |
| Msa0187540 | Msa0265650 | 0.802309 | 5.962811e-49 | -8.615850e-47 |
| Msa0187540 | Msa0282960 | 0.813798 | 2.132988e-51 | -8.615850e-47 |
| Msa0187540 | Msa0304570 | 0.816893 | 4.373466e-52 | -8.615850e-47 |
| Msa0187540 | Msa0304680 | 0.815404 | 9.407374e-52 | -8.615850e-47 |
| Msa0187540 | Msa0313900 | 0.811483 | 6.846733e-51 | -8.615850e-47 |
| Msa0187540 | Msa0318490 | 0.813995 | 1.930282e-51 | -8.615850e-47 |
| Msa0187540 | Msa0334630 | 0.809139 | 2.192717e-50 | -8.615850e-47 |
| Msa0187540 | Msa0343210 | 0.815376 | 9.545140e-52 | -8.615850e-47 |
| Msa0187540 | Msa0345050 | 0.826794 | 2.230389e-54 | -8.615850e-47 |
| Msa0187540 | Msa0357310 | 0.802202 | 6.275181e-49 | -8.615850e-47 |
| Msa0187540 | Msa0481630 | 0.996557 | 4.512964e-229 | -8.615850e-47 |
| Msa0187540 | Msa0544490 | 0.821546 | 3.811383e-53 | -8.615850e-47 |
| Msa0187540 | Msa0566280 | 0.805537 | 1.272299e-49 | -8.615850e-47 |
| Msa0187540 | Msa0567330 | 0.804463 | 2.134384e-49 | -8.615850e-47 |
| Msa0187540 | Msa0586450 | 0.800701 | 1.273817e-48 | -8.615850e-47 |
| Msa0187540 | Msa0612350 | 0.812317 | 4.506513e-51 | -8.615850e-47 |
| Msa0187540 | Msa0615210 | 0.804494 | 2.102986e-49 | -8.615850e-47 |
| Msa0187540 | Msa0640820 | 0.822293 | 2.560294e-53 | -8.615850e-47 |
| Msa0187540 | Msa0653450 | 0.807642 | 4.575257e-50 | -8.615850e-47 |
| Msa0187540 | Msa0657710 | 0.812920 | 3.325049e-51 | -8.615850e-47 |
| Msa0187540 | Msa0658190 | 0.801131 | 1.040726e-48 | -8.615850e-47 |
| Msa0187540 | Msa0682110 | 0.842465 | 2.543119e-58 | -8.615850e-47 |
| Msa0187540 | Msa0682160 | 0.837716 | 4.411078e-57 | -8.615850e-47 |
| Msa0187540 | Msa0687580 | 0.806144 | 9.487069e-50 | -8.615850e-47 |
| Msa0187540 | Msa0702720 | 0.807866 | 4.099919e-50 | -8.615850e-47 |
| Msa0187540 | Msa0702800 | 0.807686 | 4.478363e-50 | -8.615850e-47 |
| Msa0187540 | Msa0712880 | 0.814757 | 1.309748e-51 | -8.615850e-47 |
| Msa0187540 | Msa0731590 | 0.802756 | 4.823828e-49 | -8.615850e-47 |
| Msa0187540 | Msa0734250 | 0.801159 | 1.026896e-48 | -8.615850e-47 |
| Msa0187540 | Msa0736920 | 0.806606 | 7.580917e-50 | -8.615850e-47 |
| Msa0187540 | Msa0752600 | 0.842106 | 3.166837e-58 | -8.615850e-47 |
| Msa0187540 | Msa0771790 | 0.800151 | 1.648800e-48 | -8.615850e-47 |
| Msa0187540 | Msa0778570 | 0.810396 | 1.176897e-50 | -8.615850e-47 |
| Msa0187540 | Msa0795750 | 0.802285 | 6.031113e-49 | -8.615850e-47 |
| Msa0187540 | Msa0813160 | 0.805777 | 1.133436e-49 | -8.615850e-47 |
| Msa0187540 | Msa0828960 | 0.814764 | 1.304570e-51 | -8.615850e-47 |
| Msa0187540 | Msa0842750 | 0.852670 | 3.963384e-61 | -8.615850e-47 |
| Msa0187540 | Msa0869930 | 0.834668 | 2.623495e-56 | -8.615850e-47 |
| Msa0187540 | Msa0881960 | 0.803838 | 2.879108e-49 | -8.615850e-47 |
| Msa0187540 | Msa0883040 | 0.807741 | 4.359479e-50 | -8.615850e-47 |
| Msa0187540 | Msa0921390 | 0.817237 | 3.658766e-52 | -8.615850e-47 |
| Msa0187540 | Msa0928180 | 0.800737 | 1.252241e-48 | -8.615850e-47 |
| Msa0187540 | Msa0947870 | 0.826115 | 3.237470e-54 | -8.615850e-47 |
| Msa0187540 | Msa0960420 | 0.815186 | 1.051836e-51 | -8.615850e-47 |
| Msa0187540 | Msa1012800 | 0.803078 | 4.138165e-49 | -8.615850e-47 |
| Msa0187540 | Msa1015360 | 0.800713 | 1.266676e-48 | -8.615850e-47 |
| Msa0187540 | Msa1092310 | 0.833757 | 4.440081e-56 | -8.615850e-47 |
| Msa0187540 | Msa1106590 | 0.844874 | 5.769515e-59 | -8.615850e-47 |
| Msa0187540 | Msa1129330 | 0.980771 | 5.402930e-151 | -8.615850e-47 |
| Msa0187540 | Msa1184680 | 0.806002 | 1.016253e-49 | -8.615850e-47 |
| Msa0187540 | Msa1202800 | 0.841448 | 4.722507e-58 | -8.615850e-47 |
| Msa0187540 | Msa1203440 | 0.802777 | 4.774716e-49 | -8.615850e-47 |
| Msa0187540 | Msa1212830 | 0.824935 | 6.162109e-54 | -8.615850e-47 |
| Msa0187540 | Msa1238600 | 0.844078 | 9.445341e-59 | -8.615850e-47 |
| Msa0187540 | Msa1238660 | 0.835335 | 1.781889e-56 | -8.615850e-47 |
| Msa0187540 | Msa1255210 | 0.838978 | 2.085543e-57 | -8.615850e-47 |
| Msa0187540 | Msa1295650 | 0.837735 | 4.361308e-57 | -8.615850e-47 |
| Msa0187540 | Msa1319560 | 0.827718 | 1.340281e-54 | -8.615850e-47 |
| Msa0187540 | Msa1341840 | 0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa0187540 | Msa1343600 | 0.808915 | 2.448965e-50 | -8.615850e-47 |
| Msa0187540 | Msa1365820 | 0.810097 | 1.365651e-50 | -8.615850e-47 |
| Msa0187540 | Msa1368390 | 0.808323 | 3.276624e-50 | -8.615850e-47 |
| Msa0187540 | Msa1384700 | 0.841165 | 5.606816e-58 | -8.615850e-47 |
| Msa0187540 | Msa1408390 | 0.807010 | 6.226921e-50 | -8.615850e-47 |
| Msa0187540 | Msa1433360 | 0.816687 | 4.864492e-52 | -8.615850e-47 |
| Msa0187540 | Msa1444220 | 0.805565 | 1.255236e-49 | -8.615850e-47 |
| Msa0187540 | Msa1461370 | 0.826880 | 2.127750e-54 | -8.615850e-47 |
| Msa0187540 | Msa1466760 | 0.807544 | 4.799988e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187540 | MtrunA17_Chr7g0274041 | 97.093 | 344 | 9 | 1 | 1 | 344 | 1 | 343 | 0.0 | 693 |
| Msa0187540 | MtrunA17_Chr7g0274061 | 67.847 | 339 | 104 | 3 | 9 | 343 | 12 | 349 | 3.42e-173 | 484 |
| Msa0187540 | MtrunA17_Chr1g0204651 | 63.127 | 339 | 123 | 2 | 6 | 343 | 3 | 340 | 1.39e-169 | 475 |
| Msa0187540 | MtrunA17_Chr7g0274071 | 66.172 | 337 | 109 | 4 | 8 | 343 | 13 | 345 | 8.10e-167 | 469 |
| Msa0187540 | MtrunA17_Chr7g0222171 | 56.716 | 335 | 137 | 5 | 8 | 341 | 4 | 331 | 8.55e-134 | 384 |
| Msa0187540 | MtrunA17_Chr7g0221791 | 56.716 | 335 | 137 | 6 | 8 | 341 | 4 | 331 | 4.55e-132 | 380 |
| Msa0187540 | MtrunA17_Chr7g0222121 | 51.491 | 369 | 137 | 7 | 8 | 341 | 4 | 365 | 2.82e-124 | 362 |
| Msa0187540 | MtrunA17_Chr7g0274081 | 67.005 | 197 | 62 | 2 | 149 | 343 | 2 | 197 | 1.76e-91 | 271 |
| Msa0187540 | MtrunA17_Chr7g0221781 | 55.039 | 129 | 56 | 2 | 8 | 136 | 4 | 130 | 5.92e-43 | 145 |
| Msa0187540 | MtrunA17_Chr7g0222141 | 61.957 | 92 | 34 | 1 | 154 | 244 | 65 | 156 | 3.16e-35 | 126 |
| Msa0187540 | MtrunA17_Chr7g0274091 | 57.143 | 98 | 41 | 1 | 8 | 104 | 9 | 106 | 8.34e-34 | 120 |
| Msa0187540 | MtrunA17_Chr1g0169691 | 30.492 | 305 | 188 | 9 | 13 | 302 | 6 | 301 | 2.67e-28 | 112 |
| Msa0187540 | MtrunA17_Chr3g0095421 | 28.354 | 328 | 194 | 12 | 10 | 312 | 37 | 348 | 3.54e-24 | 101 |
| Msa0187540 | MtrunA17_Chr7g0221771 | 44.444 | 108 | 49 | 3 | 237 | 341 | 6 | 105 | 6.00e-24 | 94.7 |
| Msa0187540 | MtrunA17_Chr4g0049341 | 30.268 | 261 | 160 | 7 | 12 | 256 | 5 | 259 | 3.41e-23 | 98.2 |
| Msa0187540 | MtrunA17_Chr1g0167421 | 28.446 | 341 | 176 | 11 | 12 | 300 | 65 | 389 | 9.24e-23 | 98.2 |
| Msa0187540 | MtrunA17_Chr8g0380261 | 27.193 | 342 | 196 | 12 | 17 | 312 | 48 | 382 | 1.03e-22 | 97.8 |
| Msa0187540 | MtrunA17_Chr7g0222151 | 52.778 | 72 | 33 | 1 | 237 | 308 | 6 | 76 | 1.19e-20 | 84.7 |
| Msa0187540 | MtrunA17_Chr7g0221801 | 55.882 | 68 | 30 | 0 | 8 | 75 | 4 | 71 | 3.74e-20 | 83.6 |
| Msa0187540 | MtrunA17_Chr3g0127491 | 24.925 | 333 | 203 | 14 | 10 | 316 | 38 | 349 | 1.56e-19 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187540 | AT1G60690.1 | 59.172 | 338 | 133 | 4 | 5 | 341 | 4 | 337 | 1.07e-141 | 405 |
| Msa0187540 | AT1G60710.1 | 60.000 | 335 | 129 | 4 | 8 | 341 | 7 | 337 | 1.60e-139 | 399 |
| Msa0187540 | AT1G60680.1 | 57.738 | 336 | 138 | 3 | 7 | 341 | 6 | 338 | 3.09e-138 | 396 |
| Msa0187540 | AT1G60750.1 | 56.891 | 341 | 128 | 3 | 1 | 341 | 1 | 322 | 1.28e-137 | 394 |
| Msa0187540 | AT1G60730.1 | 56.716 | 335 | 140 | 4 | 8 | 341 | 7 | 337 | 3.75e-134 | 386 |
| Msa0187540 | AT1G60730.3 | 53.521 | 355 | 140 | 5 | 8 | 341 | 7 | 357 | 3.27e-129 | 374 |
| Msa0187540 | AT1G10810.1 | 55.821 | 335 | 143 | 4 | 8 | 341 | 7 | 337 | 4.19e-129 | 373 |
| Msa0187540 | AT1G10810.3 | 56.716 | 268 | 111 | 4 | 75 | 341 | 22 | 285 | 3.89e-103 | 305 |
| Msa0187540 | AT1G60680.2 | 63.877 | 227 | 81 | 1 | 7 | 232 | 6 | 232 | 1.81e-101 | 299 |
| Msa0187540 | AT1G10810.2 | 60.515 | 233 | 90 | 2 | 8 | 239 | 7 | 238 | 1.35e-95 | 285 |
| Msa0187540 | AT1G60730.2 | 55.714 | 140 | 61 | 1 | 8 | 147 | 7 | 145 | 4.45e-47 | 158 |
| Msa0187540 | AT1G04690.1 | 29.180 | 305 | 192 | 9 | 13 | 302 | 6 | 301 | 9.66e-28 | 111 |
| Msa0187540 | AT1G06690.1 | 28.308 | 325 | 198 | 11 | 10 | 312 | 48 | 359 | 8.95e-26 | 106 |
| Msa0187540 | AT4G33670.1 | 27.389 | 314 | 194 | 10 | 13 | 313 | 9 | 301 | 7.56e-25 | 103 |
| Msa0187540 | AT5G53580.1 | 26.347 | 334 | 195 | 15 | 10 | 315 | 39 | 349 | 1.01e-20 | 92.4 |
| Msa0187540 | AT1G04420.1 | 26.426 | 333 | 193 | 10 | 12 | 300 | 60 | 384 | 7.00e-20 | 90.5 |
| Msa0187540 | AT2G21250.1 | 26.871 | 294 | 155 | 8 | 46 | 313 | 29 | 288 | 1.91e-13 | 70.5 |
| Msa0187540 | AT2G21260.1 | 25.926 | 297 | 154 | 9 | 46 | 313 | 29 | 288 | 1.08e-12 | 68.2 |
Find 100 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATAAAACCGATTGTTAT+TGG | 0.219658 | 2_1:+2295851 | Msa0187540:three_prime_UTR |
| TAAGTTTGGGATTGTCAAAA+TGG | 0.230952 | 2_1:+2291754 | Msa0187540:CDS |
| ATTCAGATTGCCACTAAGTT+TGG | 0.254419 | 2_1:+2291740 | Msa0187540:CDS |
| CAGATATTGTTCCCCTTTGC+AGG | 0.291842 | 2_1:+2292155 | Msa0187540:CDS |
| TTTGAGACTCAAACTAGTTC+TGG | 0.313286 | 2_1:+2295795 | Msa0187540:three_prime_UTR |
| CAACATGATCGAACGTATTC+AGG | 0.315662 | 2_1:-2291806 | None:intergenic |
| CACATTAATTATAAGTAAAC+TGG | 0.315738 | 2_1:-2295946 | None:intergenic |
| AAAGATATGGCAACATCTTC+TGG | 0.320111 | 2_1:-2291482 | None:intergenic |
| GTACTAATATATTCCTTGTT+TGG | 0.328996 | 2_1:+2295979 | Msa0187540:three_prime_UTR |
| AGGGTAGTCTTCAACGTCTT+GGG | 0.329622 | 2_1:+2291831 | Msa0187540:CDS |
| TCTGGTAACGTTGTAGTAAA+TGG | 0.332352 | 2_1:+2291779 | Msa0187540:CDS |
| TCCCCTGACACCTCAGATAT+TGG | 0.333520 | 2_1:-2295682 | None:intergenic |
| CAGGTTTCTAAGCTTGGATA+TGG | 0.339873 | 2_1:+2291422 | Msa0187540:intron |
| CTGCAAAGGGGAACAATATC+TGG | 0.344620 | 2_1:-2292154 | None:intergenic |
| TCCAAATGGAATGGTCTCTT+TGG | 0.345011 | 2_1:+2292116 | Msa0187540:CDS |
| TGCACATACCAATGAAGTTT+TGG | 0.361334 | 2_1:+2291562 | Msa0187540:CDS |
| ATGACACCGCCCCAAGAGTT+AGG | 0.361826 | 2_1:+2291118 | Msa0187540:five_prime_UTR |
| CTTTCCGACCAAAACTTCAT+TGG | 0.365610 | 2_1:-2291570 | None:intergenic |
| TACTTGCAGGTTTCTAAGCT+TGG | 0.367379 | 2_1:+2291416 | Msa0187540:intron |
| TTCAGATTGCCACTAAGTTT+GGG | 0.369267 | 2_1:+2291741 | Msa0187540:CDS |
| TTTGACAATCCCAAACTTAG+TGG | 0.372113 | 2_1:-2291750 | None:intergenic |
| GCAATCTGAATTTGATCTCT+TGG | 0.378904 | 2_1:-2291728 | None:intergenic |
| GGGATTGTCAAAATGGAATC+TGG | 0.379653 | 2_1:+2291761 | Msa0187540:CDS |
| AGCATGTTTGATCAAAGATA+TGG | 0.406589 | 2_1:-2291495 | None:intergenic |
| TCCATTTGGACAGCAGTAAT+GGG | 0.412943 | 2_1:-2292103 | None:intergenic |
| ATCAAAGAAAGTGATTCCTT+TGG | 0.413751 | 2_1:-2291522 | None:intergenic |
| GGTAGGTGAACCTAACTCTT+GGG | 0.426563 | 2_1:-2291128 | None:intergenic |
| TCCAAAGAGACCATTCCATT+TGG | 0.433487 | 2_1:-2292117 | None:intergenic |
| ACTCAACAAAGATGATTTGA+AGG | 0.433839 | 2_1:+2295642 | Msa0187540:CDS |
| TTCCATTTGGACAGCAGTAA+TGG | 0.433941 | 2_1:-2292104 | None:intergenic |
| CTTAAGAAGTTGGTTGAAGA+GGG | 0.435310 | 2_1:+2292013 | Msa0187540:CDS |
| TCCCATTACTGCTGTCCAAA+TGG | 0.437772 | 2_1:+2292102 | Msa0187540:CDS |
| GATGGGAGAGCTTAAGAAGT+TGG | 0.438930 | 2_1:+2292003 | Msa0187540:intron |
| CGATTGTTATTGGTCAAATA+CGG | 0.439268 | 2_1:+2295861 | Msa0187540:three_prime_UTR |
| CTTCACAACTTGCTCTTGCA+TGG | 0.444626 | 2_1:+2295326 | Msa0187540:CDS |
| GCTTAAGAAGTTGGTTGAAG+AGG | 0.453021 | 2_1:+2292012 | Msa0187540:CDS |
| GAGGGTAGTCTTCAACGTCT+TGG | 0.455629 | 2_1:+2291830 | Msa0187540:CDS |
| ATCAGTTAGGTACCTGCAAA+GGG | 0.462136 | 2_1:-2292167 | None:intergenic |
| CCTTACAGTCCCCTTGGCCG+TGG | 0.464143 | 2_1:+2294896 | Msa0187540:CDS |
| ATCAAACATGCTTTCTCCAA+AGG | 0.464584 | 2_1:+2291506 | Msa0187540:CDS |
| TTATCATCGGATGGAAAAGT+TGG | 0.465236 | 2_1:+2295279 | Msa0187540:CDS |
| TATGGATGCATGGGCCTCAC+TGG | 0.467969 | 2_1:+2291440 | Msa0187540:CDS |
| GTGTCAGGGGATCGGACAAC+TGG | 0.468035 | 2_1:+2295694 | Msa0187540:CDS |
| CGTATTTGACCAATAACAAT+CGG | 0.468386 | 2_1:-2295860 | None:intergenic |
| GTGCCAATATCTGAGGTGTC+AGG | 0.468582 | 2_1:+2295679 | Msa0187540:CDS |
| CTTCAAGAATGTATTGATAG+TGG | 0.472424 | 2_1:-2291156 | None:intergenic |
| GACAACTCTTACAGGGAACT+TGG | 0.479074 | 2_1:+2294860 | Msa0187540:intron |
| CATATTCCTCGGGTGAAGCT+TGG | 0.479903 | 2_1:+2291305 | Msa0187540:CDS |
| GCAATGCAACCAAGGTTACA+AGG | 0.480835 | 2_1:+2295229 | Msa0187540:CDS |
| ATACTACTATTCATATTCCT+CGG | 0.483116 | 2_1:+2291294 | Msa0187540:CDS |
| CGTTTCTTACTTCTAAGCCT+TGG | 0.483161 | 2_1:-2291331 | None:intergenic |
| TTACTCACAGTGTCCTCAAT+GGG | 0.500470 | 2_1:-2291902 | None:intergenic |
| TACTACTATTCATATTCCTC+GGG | 0.501777 | 2_1:+2291295 | Msa0187540:CDS |
| GGAAAGTTACTCACCAGGGA+TGG | 0.508635 | 2_1:-2295377 | None:intergenic |
| TGGTAGGTGAACCTAACTCT+TGG | 0.508694 | 2_1:-2291129 | None:intergenic |
| CCACGGCCAAGGGGACTGTA+AGG | 0.509324 | 2_1:-2294896 | None:intergenic |
| GACGATGTAGTGCCCATCCC+TGG | 0.510769 | 2_1:+2295364 | Msa0187540:CDS |
| ATTACTCACAGTGTCCTCAA+TGG | 0.516227 | 2_1:-2291903 | None:intergenic |
| GAGGGAAAGATTAAGTACAT+AGG | 0.518621 | 2_1:+2292031 | Msa0187540:CDS |
| GAAAATGGTAGTAGTGGGAT+TGG | 0.522692 | 2_1:+2291087 | Msa0187540:five_prime_UTR |
| TCTTACAGGGAACTTGGCAT+TGG | 0.523565 | 2_1:+2294866 | Msa0187540:intron |
| AATGGTAGTAGTGGGATTGG+TGG | 0.533176 | 2_1:+2291090 | Msa0187540:five_prime_UTR |
| TGGGAACAGTGGTGTCAATA+CGG | 0.535040 | 2_1:-2291883 | None:intergenic |
| AATCAGTTAGGTACCTGCAA+AGG | 0.537749 | 2_1:-2292168 | None:intergenic |
| TGCCAATATCTGAGGTGTCA+GGG | 0.538436 | 2_1:+2295680 | Msa0187540:CDS |
| TGACACCACTGTTCCCATTG+AGG | 0.539838 | 2_1:+2291889 | Msa0187540:CDS |
| AAGCTTGGATATGGATGCAT+GGG | 0.540210 | 2_1:+2291431 | Msa0187540:CDS |
| CTTGCATGGATTCTTCATCA+AGG | 0.547230 | 2_1:+2295340 | Msa0187540:CDS |
| CGGGTGAAGCTTGGAAGCCA+AGG | 0.550725 | 2_1:+2291314 | Msa0187540:CDS |
| AAAAGGAAAATGGTAGTAGT+GGG | 0.561756 | 2_1:+2291082 | None:intergenic |
| TAAGCTTGGATATGGATGCA+TGG | 0.565954 | 2_1:+2291430 | Msa0187540:CDS |
| AATGTATTGATAGTGGCAGC+TGG | 0.575541 | 2_1:-2291149 | None:intergenic |
| TATCTGAGGTGTCAGGGGAT+CGG | 0.577450 | 2_1:+2295686 | Msa0187540:CDS |
| TCGGATGGAAAAGTTGGCAC+AGG | 0.579387 | 2_1:+2295285 | Msa0187540:CDS |
| ATAGTGCCTTACAGTCCCCT+TGG | 0.580787 | 2_1:+2294890 | Msa0187540:CDS |
| GCCAATATCTGAGGTGTCAG+GGG | 0.582430 | 2_1:+2295681 | Msa0187540:CDS |
| TTCACCAGGCAATGCAACCA+AGG | 0.582900 | 2_1:+2295221 | Msa0187540:intron |
| CTATCAATACATTCTTGAAG+AGG | 0.585291 | 2_1:+2291159 | Msa0187540:five_prime_UTR |
| GAAAGTTACTCACCAGGGAT+GGG | 0.588008 | 2_1:-2295376 | None:intergenic |
| TTCGCAGCTCTCTCCAAACA+AGG | 0.592827 | 2_1:-2295992 | None:intergenic |
| TACGTTCGATCATGTTGTGA+GGG | 0.601109 | 2_1:+2291812 | Msa0187540:CDS |
| CAATGCAACCAAGGTTACAA+GGG | 0.603737 | 2_1:+2295230 | Msa0187540:CDS |
| TTACTGCTGTCCAAATGGAA+TGG | 0.605560 | 2_1:+2292107 | Msa0187540:CDS |
| CTAGTACTGATACAATCAGA+AGG | 0.606846 | 2_1:+2292065 | Msa0187540:CDS |
| GTAGGTGAACCTAACTCTTG+GGG | 0.611758 | 2_1:-2291127 | None:intergenic |
| TTAATCACATAAACATAACA+TGG | 0.615428 | 2_1:-2295922 | None:intergenic |
| GGGTAGTCTTCAACGTCTTG+GGG | 0.616325 | 2_1:+2291832 | Msa0187540:CDS |
| CATACCAGAAAACTGTCTGC+AGG | 0.620973 | 2_1:-2294953 | None:intergenic |
| TGGCTTCCAAGCTTCACCCG+AGG | 0.642698 | 2_1:-2291311 | None:intergenic |
| TAAGTACATAGGATTATCTG+AGG | 0.653859 | 2_1:+2292042 | Msa0187540:CDS |
| AGTGTCCTCAATGGGAACAG+TGG | 0.665325 | 2_1:-2291894 | None:intergenic |
| AAGTTGGCACAGGAGAAGCA+TGG | 0.666692 | 2_1:+2295295 | Msa0187540:CDS |
| TATTGATAGTGGCAGCTGGT+AGG | 0.669189 | 2_1:-2291145 | None:intergenic |
| ATACGTTCGATCATGTTGTG+AGG | 0.673151 | 2_1:+2291811 | Msa0187540:CDS |
| AATGCAACCAAGGTTACAAG+GGG | 0.675322 | 2_1:+2295231 | Msa0187540:CDS |
| TAGTACTGATACAATCAGAA+GGG | 0.683169 | 2_1:+2292066 | Msa0187540:CDS |
| GGTGAACCTAACTCTTGGGG+CGG | 0.697254 | 2_1:-2291124 | None:intergenic |
| AGATGCTGTGCCAATATCTG+AGG | 0.705973 | 2_1:+2295672 | Msa0187540:CDS |
| TCAGTTAGGTACCTGCAAAG+GGG | 0.723528 | 2_1:-2292166 | None:intergenic |
| CAGCGTTGTATACTCCAGTG+AGG | 0.755691 | 2_1:-2291454 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACATTTTAAAAATTCTC+AGG | + | chr2_1:2291691-2291710 | Msa0187540:intron | 15.0% |
| !!! | TGTAATTTTTGCAAAAATTA+AGG | - | chr2_1:2292279-2292298 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTATCAAGCA+AGG | + | chr2_1:2292472-2292491 | Msa0187540:intron | 15.0% |
| !!! | AATTTATTTCTCTCTTTTTT+GGG | - | chr2_1:2294183-2294202 | None:intergenic | 15.0% |
| !! | TTAAAGTAAAACAAACATTA+AGG | + | chr2_1:2294496-2294515 | Msa0187540:intron | 15.0% |
| !! | TAAAGTAAAACAAACATTAA+GGG | + | chr2_1:2294497-2294516 | Msa0187540:intron | 15.0% |
| !! | ATTGTTTATATTCAAACATT+TGG | - | chr2_1:2295080-2295099 | None:intergenic | 15.0% |
| !! | ATATTTCAAATAATTTCATC+TGG | - | chr2_1:2295502-2295521 | None:intergenic | 15.0% |
| !! | AAGTTAGAAACACAAAAAAA+TGG | + | chr2_1:2291268-2291287 | Msa0187540:exon | 20.0% |
| !! | AGTTAGAAACACAAAAAAAT+GGG | + | chr2_1:2291269-2291288 | Msa0187540:exon | 20.0% |
| !!! | ATCTATTCTTGAAATTTGTT+AGG | + | chr2_1:2291932-2291951 | Msa0187540:intron | 20.0% |
| !! | AAAAAGAAAATCAATCAGTT+AGG | - | chr2_1:2292183-2292202 | None:intergenic | 20.0% |
| !!! | AATTTTTGCAAAAATTAAGG+TGG | - | chr2_1:2292276-2292295 | None:intergenic | 20.0% |
| !!! | GGTATCTTAAATTTTACATT+AGG | + | chr2_1:2292392-2292411 | Msa0187540:intron | 20.0% |
| !! | AAGGAAATTCATTAAAAAAC+AGG | + | chr2_1:2292491-2292510 | Msa0187540:intron | 20.0% |
| !!! | CAATTTATTTCTCTCTTTTT+TGG | - | chr2_1:2294184-2294203 | None:intergenic | 20.0% |
| !! | TCTTTCAATTCCTAATTTAA+TGG | + | chr2_1:2294787-2294806 | Msa0187540:intron | 20.0% |
| !! | ATGTCAAAAACCATTAAATT+AGG | - | chr2_1:2294800-2294819 | None:intergenic | 20.0% |
| !! | AACAAAAGAAATCATAATTG+AGG | - | chr2_1:2295532-2295551 | None:intergenic | 20.0% |
| !! | TTAATCACATAAACATAACA+TGG | - | chr2_1:2295925-2295944 | None:intergenic | 20.0% |
| !! | CACATTAATTATAAGTAAAC+TGG | - | chr2_1:2295949-2295968 | None:intergenic | 20.0% |
| !!! | TAGAGAGAATTTTTTTTGAG+TGG | + | chr2_1:2291231-2291250 | Msa0187540:five_prime_UTR | 25.0% |
| ! | ATACTACTATTCATATTCCT+CGG | + | chr2_1:2291294-2291313 | Msa0187540:CDS | 25.0% |
| ! | AAACATTGTCAATAATTCTC+AGG | - | chr2_1:2291391-2291410 | None:intergenic | 25.0% |
| !! | AAAAATTGAGATTTTCGACT+TGG | - | chr2_1:2292350-2292369 | None:intergenic | 25.0% |
| !!! | CAGTTTTTTAAAGATGAGTT+AGG | - | chr2_1:2292418-2292437 | None:intergenic | 25.0% |
| !! | CTAACTCATCTTTAAAAAAC+TGG | + | chr2_1:2292416-2292435 | Msa0187540:intron | 25.0% |
| !! | CTTTAAAAAACTGGCTTATA+AGG | + | chr2_1:2292425-2292444 | Msa0187540:intron | 25.0% |
| ! | AATTCATTAAAAAACAGGAG+AGG | + | chr2_1:2292496-2292515 | Msa0187540:intron | 25.0% |
| !! | TATGGACTAATCTTTGTTAA+AGG | - | chr2_1:2292528-2292547 | None:intergenic | 25.0% |
| !! | TCCATAGAAATTCTAGAAAA+AGG | + | chr2_1:2292542-2292561 | Msa0187540:intron | 25.0% |
| !!! | ATTTTGTGCATTTTTAGCTA+AGG | + | chr2_1:2292646-2292665 | Msa0187540:intron | 25.0% |
| ! | GATTCATAACATAATTTCTG+AGG | - | chr2_1:2293171-2293190 | None:intergenic | 25.0% |
| !!! | AATTTATTTTGAATGGTGCT+TGG | - | chr2_1:2293762-2293781 | Msa0187550:CDS | 25.0% |
| !!! | GCTTCTGAATTTATTTTGAA+TGG | - | chr2_1:2293769-2293788 | Msa0187550:CDS | 25.0% |
| ! | TTATTCTTCAACATTCAACT+TGG | - | chr2_1:2293903-2293922 | Msa0187550:CDS | 25.0% |
| !!! | ACTCTAATACCATGATTTTT+TGG | + | chr2_1:2294131-2294150 | Msa0187540:intron | 25.0% |
| !!! | CTCTAATACCATGATTTTTT+GGG | + | chr2_1:2294132-2294151 | Msa0187540:intron | 25.0% |
| !!! | ATTATTTGGAGTTGATAGAA+TGG | + | chr2_1:2294216-2294235 | Msa0187540:intron | 25.0% |
| !! | TAGTTGACTTTAATTAGTGT+TGG | + | chr2_1:2294242-2294261 | Msa0187540:intron | 25.0% |
| !! | TTAAGATTGTTAGCTTAGTT+AGG | - | chr2_1:2294284-2294303 | None:intergenic | 25.0% |
| ! | TTTCTAAGTTCTGCATAAAA+AGG | - | chr2_1:2294410-2294429 | None:intergenic | 25.0% |
| !! | TATTTTGCGATTTCATAACT+TGG | + | chr2_1:2294441-2294460 | Msa0187540:intron | 25.0% |
| !! | ATTTTGCGATTTCATAACTT+GGG | + | chr2_1:2294442-2294461 | Msa0187540:intron | 25.0% |
| !!! | ATTGTTAGTGGTTTTAGAAA+TGG | + | chr2_1:2294620-2294639 | Msa0187540:intron | 25.0% |
| ! | AAGTAAAACTATTCGATCAA+AGG | - | chr2_1:2294722-2294741 | None:intergenic | 25.0% |
| !!! | ATAGTTTTACTTGCTTGAAT+TGG | + | chr2_1:2294730-2294749 | Msa0187540:intron | 25.0% |
| ! | GTATTCATACTCAAATCAAA+AGG | - | chr2_1:2294758-2294777 | None:intergenic | 25.0% |
| ! | ATTTCGAGAAAGAATTGTAA+AGG | - | chr2_1:2294823-2294842 | None:intergenic | 25.0% |
| ! | AAACATTTATGAGACTGTTT+AGG | - | chr2_1:2295131-2295150 | None:intergenic | 25.0% |
| !! | GTTCATTTGAGTTTATTTAC+TGG | - | chr2_1:2295157-2295176 | None:intergenic | 25.0% |
| !! | AGAACAAGATGTTTTATCAT+CGG | + | chr2_1:2295266-2295285 | Msa0187540:CDS | 25.0% |
| ! | TGAACATTCAGATTATACAA+GGG | - | chr2_1:2295444-2295463 | None:intergenic | 25.0% |
| ! | TTGAACATTCAGATTATACA+AGG | - | chr2_1:2295445-2295464 | None:intergenic | 25.0% |
| ! | TTGTATAATCTGAATGTTCA+AGG | + | chr2_1:2295444-2295463 | Msa0187540:intron | 25.0% |
| !!! | ACAATCGGTTTTATTCATAT+GGG | - | chr2_1:2295848-2295867 | None:intergenic | 25.0% |
| !!! | AACAATCGGTTTTATTCATA+TGG | - | chr2_1:2295849-2295868 | None:intergenic | 25.0% |
| ! | TGAATAAAACCGATTGTTAT+TGG | + | chr2_1:2295851-2295870 | Msa0187540:three_prime_UTR | 25.0% |
| ! | TCAGAAAAATTTGTGTTTCA+TGG | + | chr2_1:2295889-2295908 | Msa0187540:three_prime_UTR | 25.0% |
| ! | GTACTAATATATTCCTTGTT+TGG | + | chr2_1:2295979-2295998 | Msa0187540:three_prime_UTR | 25.0% |
| ! | CTTCAAGAATGTATTGATAG+TGG | - | chr2_1:2291159-2291178 | None:intergenic | 30.0% |
| CTATCAATACATTCTTGAAG+AGG | + | chr2_1:2291159-2291178 | Msa0187540:five_prime_UTR | 30.0% | |
| TACTACTATTCATATTCCTC+GGG | + | chr2_1:2291295-2291314 | Msa0187540:CDS | 30.0% | |
| !!! | CAATGTTTTTTGTTACTTGC+AGG | + | chr2_1:2291403-2291422 | Msa0187540:intron | 30.0% |
| AGCATGTTTGATCAAAGATA+TGG | - | chr2_1:2291498-2291517 | None:intergenic | 30.0% | |
| ATCAAAGAAAGTGATTCCTT+TGG | - | chr2_1:2291525-2291544 | None:intergenic | 30.0% | |
| TAAAAATTCTCAGGCACTAA+AGG | + | chr2_1:2291700-2291719 | Msa0187540:intron | 30.0% | |
| ! | TAAGTTTGGGATTGTCAAAA+TGG | + | chr2_1:2291754-2291773 | Msa0187540:CDS | 30.0% |
| !! | GAAATTTGTTAGGAAGTGAT+AGG | + | chr2_1:2291942-2291961 | Msa0187540:intron | 30.0% |
| !! | TGTTTTGAATGAGTCAAAGA+TGG | + | chr2_1:2291985-2292004 | Msa0187540:intron | 30.0% |
| !! | GTTTTGAATGAGTCAAAGAT+GGG | + | chr2_1:2291986-2292005 | Msa0187540:intron | 30.0% |
| TAAGTACATAGGATTATCTG+AGG | + | chr2_1:2292042-2292061 | Msa0187540:CDS | 30.0% | |
| !! | TAGTACTGATACAATCAGAA+GGG | + | chr2_1:2292066-2292085 | Msa0187540:CDS | 30.0% |
| ! | TACTTTTGCAGTCATAATCA+TGG | - | chr2_1:2292228-2292247 | None:intergenic | 30.0% |
| ! | TATGACTGCAAAAGTATGTT+TGG | + | chr2_1:2292232-2292251 | Msa0187540:intron | 30.0% |
| CTAATCTTTGTTAAAGGTTC+AGG | - | chr2_1:2292522-2292541 | None:intergenic | 30.0% | |
| !!! | GCCTTTTTCTAGAATTTCTA+TGG | - | chr2_1:2292546-2292565 | None:intergenic | 30.0% |
| TGTGCATTTACAAGTGAAAT+GGG | + | chr2_1:2292701-2292720 | Msa0187540:intron | 30.0% | |
| ATCTCTTATCACAAAACCAA+TGG | + | chr2_1:2292950-2292969 | Msa0187540:intron | 30.0% | |
| ATTAATGCTATATGCTCCAT+TGG | - | chr2_1:2292969-2292988 | None:intergenic | 30.0% | |
| TGCCATAATTCACATCATTT+GGG | - | chr2_1:2293255-2293274 | None:intergenic | 30.0% | |
| ! | TGCATTTATGGACTGATAAA+TGG | - | chr2_1:2293858-2293877 | Msa0187550:CDS | 30.0% |
| AACATTCAACTTGGACTATA+GGG | - | chr2_1:2293894-2293913 | Msa0187550:CDS | 30.0% | |
| TAACAAAGCCCAAAAAATCA+TGG | - | chr2_1:2294143-2294162 | None:intergenic | 30.0% | |
| GAGAGAAATAAATTGAGAGA+AGG | + | chr2_1:2294189-2294208 | Msa0187540:intron | 30.0% | |
| TTTGTTGGACTTGGATATAA+TGG | - | chr2_1:2294339-2294358 | None:intergenic | 30.0% | |
| AGTTCTGCATAAAAAGGAAA+TGG | - | chr2_1:2294404-2294423 | None:intergenic | 30.0% | |
| AACTGTCTCAACAATTACAA+AGG | - | chr2_1:2294563-2294582 | None:intergenic | 30.0% | |
| ACAATAGTTCCTTGAAACAA+TGG | + | chr2_1:2294590-2294609 | Msa0187540:intron | 30.0% | |
| ATGTAAAAGCCATTGTTTCA+AGG | - | chr2_1:2294602-2294621 | None:intergenic | 30.0% | |
| ! | AATGGCTTTTACATTGTTAG+TGG | + | chr2_1:2294608-2294627 | Msa0187540:intron | 30.0% |
| AGGAATTGAAAGAAAGAACT+TGG | - | chr2_1:2294780-2294799 | None:intergenic | 30.0% | |
| ATTCTTTCTCGAAATGACTT+CGG | + | chr2_1:2294828-2294847 | Msa0187540:intron | 30.0% | |
| ACTGTCATCAGAAACAAATT+GGG | - | chr2_1:2294986-2295005 | None:intergenic | 30.0% | |
| ATAATCTGAATGTTCAAGGA+AGG | + | chr2_1:2295448-2295467 | Msa0187540:intron | 30.0% | |
| TAATCTGAATGTTCAAGGAA+GGG | + | chr2_1:2295449-2295468 | Msa0187540:intron | 30.0% | |
| ACTCAACAAAGATGATTTGA+AGG | + | chr2_1:2295642-2295661 | Msa0187540:CDS | 30.0% | |
| CGTATTTGACCAATAACAAT+CGG | - | chr2_1:2295863-2295882 | None:intergenic | 30.0% | |
| ! | CGATTGTTATTGGTCAAATA+CGG | + | chr2_1:2295861-2295880 | Msa0187540:three_prime_UTR | 30.0% |
| AAGAAACGTTTGTCCTTCAT+TGG | + | chr2_1:2291346-2291365 | Msa0187540:intron | 35.0% | |
| GAAGTGTGAAAATCCAATGA+AGG | - | chr2_1:2291362-2291381 | None:intergenic | 35.0% | |
| AAAGATATGGCAACATCTTC+TGG | - | chr2_1:2291485-2291504 | None:intergenic | 35.0% | |
| ATCAAACATGCTTTCTCCAA+AGG | + | chr2_1:2291506-2291525 | Msa0187540:CDS | 35.0% | |
| ! | TGCACATACCAATGAAGTTT+TGG | + | chr2_1:2291562-2291581 | Msa0187540:CDS | 35.0% |
| !! | CATACCAATGAAGTTTTGGT+CGG | + | chr2_1:2291566-2291585 | Msa0187540:CDS | 35.0% |
| ATGAAGATGAACTGATGAAG+TGG | - | chr2_1:2291599-2291618 | None:intergenic | 35.0% | |
| GCAATCTGAATTTGATCTCT+TGG | - | chr2_1:2291731-2291750 | None:intergenic | 35.0% | |
| ATTCAGATTGCCACTAAGTT+TGG | + | chr2_1:2291740-2291759 | Msa0187540:CDS | 35.0% | |
| TTCAGATTGCCACTAAGTTT+GGG | + | chr2_1:2291741-2291760 | Msa0187540:CDS | 35.0% | |
| TTTGACAATCCCAAACTTAG+TGG | - | chr2_1:2291753-2291772 | None:intergenic | 35.0% | |
| ! | TCTGGTAACGTTGTAGTAAA+TGG | + | chr2_1:2291779-2291798 | Msa0187540:CDS | 35.0% |
| !! | AGGTAGTCGTGTTTTTGATT+TGG | + | chr2_1:2291962-2291981 | Msa0187540:intron | 35.0% |
| ! | CTTAAGAAGTTGGTTGAAGA+GGG | + | chr2_1:2292013-2292032 | Msa0187540:CDS | 35.0% |
| GAGGGAAAGATTAAGTACAT+AGG | + | chr2_1:2292031-2292050 | Msa0187540:CDS | 35.0% | |
| !! | CTAGTACTGATACAATCAGA+AGG | + | chr2_1:2292065-2292084 | Msa0187540:CDS | 35.0% |
| GATAATCTGCAAGTTAGACA+AGG | - | chr2_1:2292206-2292225 | None:intergenic | 35.0% | |
| !!! | TTTTCGACTTGGTGCATATT+TGG | - | chr2_1:2292339-2292358 | None:intergenic | 35.0% |
| TTATGACTGTTTCAGTTGTG+AGG | + | chr2_1:2292371-2292390 | Msa0187540:intron | 35.0% | |
| AATGCACACATTCTTAGAGA+GGG | - | chr2_1:2292689-2292708 | None:intergenic | 35.0% | |
| AAATGCACACATTCTTAGAG+AGG | - | chr2_1:2292690-2292709 | None:intergenic | 35.0% | |
| GTGTGCATTTACAAGTGAAA+TGG | + | chr2_1:2292700-2292719 | Msa0187540:intron | 35.0% | |
| TGATTCTTTAGTGGTTGTGA+AGG | - | chr2_1:2292796-2292815 | None:intergenic | 35.0% | |
| ! | GATTGAGACTGATTCTTTAG+TGG | - | chr2_1:2292805-2292824 | None:intergenic | 35.0% |
| ATGCTCAAGCTAAGTTTCTA+GGG | - | chr2_1:2292932-2292951 | None:intergenic | 35.0% | |
| AGAACCATCACAGTTTATCT+TGG | + | chr2_1:2292998-2293017 | Msa0187540:intron | 35.0% | |
| ! | TTCAGAATTGCTCAGCTTTT+TGG | - | chr2_1:2293095-2293114 | None:intergenic | 35.0% |
| TACACTCTTGCTTTAGTCAA+GGG | - | chr2_1:2293137-2293156 | None:intergenic | 35.0% | |
| TTTGGGCTATTTGGATTGAA+AGG | - | chr2_1:2293238-2293257 | None:intergenic | 35.0% | |
| TTCACATCATTTGGGCTATT+TGG | - | chr2_1:2293247-2293266 | None:intergenic | 35.0% | |
| AGCCCAAATGATGTGAATTA+TGG | + | chr2_1:2293250-2293269 | Msa0187540:intron | 35.0% | |
| CTGCCATAATTCACATCATT+TGG | - | chr2_1:2293256-2293275 | None:intergenic | 35.0% | |
| CTATGGAAATGGTTAAGTCA+TGG | - | chr2_1:2293371-2293390 | None:intergenic | 35.0% | |
| TCACTACACAACTATGGAAA+TGG | - | chr2_1:2293382-2293401 | Msa0187550:CDS | 35.0% | |
| GATGAAAATCTCAGAAAGAG+AGG | - | chr2_1:2293481-2293500 | Msa0187550:CDS | 35.0% | |
| !!! | TTTCTGAGATTTTCATCCGT+AGG | + | chr2_1:2293484-2293503 | Msa0187540:intron | 35.0% |
| AATTGGAATGCTTCAGTAGA+TGG | - | chr2_1:2293646-2293665 | Msa0187550:CDS | 35.0% | |
| ! | TTTATGGACTGATAAATGGC+TGG | - | chr2_1:2293854-2293873 | Msa0187550:CDS | 35.0% |
| ACATTCAACTTGGACTATAG+GGG | - | chr2_1:2293893-2293912 | Msa0187550:CDS | 35.0% | |
| CAACATTCAACTTGGACTAT+AGG | - | chr2_1:2293895-2293914 | Msa0187550:CDS | 35.0% | |
| ATAACCTCATCTGTTTGGAT+CGG | - | chr2_1:2293946-2293965 | None:intergenic | 35.0% | |
| ATCACATAACCTCATCTGTT+TGG | - | chr2_1:2293951-2293970 | None:intergenic | 35.0% | |
| AACAGATGAGGTTATGTGAT+AGG | + | chr2_1:2293951-2293970 | Msa0187540:intron | 35.0% | |
| GAGGTTATGTGATAGGATTT+AGG | + | chr2_1:2293958-2293977 | Msa0187540:intron | 35.0% | |
| TTCAGACCTTATCCTCTAAA+AGG | + | chr2_1:2294017-2294036 | Msa0187540:intron | 35.0% | |
| TTGGTGTGTGAATAATTTGG+TGG | + | chr2_1:2294091-2294110 | Msa0187540:intron | 35.0% | |
| TGAGAGAAGGATCGATTATT+TGG | + | chr2_1:2294202-2294221 | Msa0187540:intron | 35.0% | |
| ! | AGATTGTTAGCTTAGTTAGG+AGG | - | chr2_1:2294281-2294300 | None:intergenic | 35.0% |
| !! | CTGTTAGAATTTGTTGGACT+TGG | - | chr2_1:2294348-2294367 | None:intergenic | 35.0% |
| AGTCCAACAAATTCTAACAG+AGG | + | chr2_1:2294348-2294367 | Msa0187540:intron | 35.0% | |
| !! | ACACCTTTTGTTTCATGTGA+TGG | + | chr2_1:2294652-2294671 | Msa0187540:intron | 35.0% |
| GACTGTCATCAGAAACAAAT+TGG | - | chr2_1:2294987-2295006 | None:intergenic | 35.0% | |
| TCAAATGAACCAATCCAAAC+AGG | + | chr2_1:2295167-2295186 | Msa0187540:intron | 35.0% | |
| ATAATGAACAAGGACCTGTT+TGG | - | chr2_1:2295184-2295203 | None:intergenic | 35.0% | |
| ATGCTGGTGAATAATGAACA+AGG | - | chr2_1:2295194-2295213 | None:intergenic | 35.0% | |
| ! | CAAGATGTTTTATCATCGGA+TGG | + | chr2_1:2295270-2295289 | Msa0187540:CDS | 35.0% |
| TTATCATCGGATGGAAAAGT+TGG | + | chr2_1:2295279-2295298 | Msa0187540:CDS | 35.0% | |
| ! | GTGCTTTTGTTCAATGTTCA+TGG | + | chr2_1:2295716-2295735 | Msa0187540:CDS | 35.0% |
| ! | GCATCAAACTATGCTTTTCT+TGG | - | chr2_1:2295757-2295776 | None:intergenic | 35.0% |
| CAAAAACTGAGGTACAATAC+TGG | - | chr2_1:2295779-2295798 | None:intergenic | 35.0% | |
| AGTTTGAGTCTCAAAAACTG+AGG | - | chr2_1:2295790-2295809 | None:intergenic | 35.0% | |
| ! | TTTGAGACTCAAACTAGTTC+TGG | + | chr2_1:2295795-2295814 | Msa0187540:three_prime_UTR | 35.0% |
| ! | GAAAATGGTAGTAGTGGGAT+TGG | + | chr2_1:2291087-2291106 | Msa0187540:five_prime_UTR | 40.0% |
| !! | AATGTATTGATAGTGGCAGC+TGG | - | chr2_1:2291152-2291171 | None:intergenic | 40.0% |
| CGTTTCTTACTTCTAAGCCT+TGG | - | chr2_1:2291334-2291353 | None:intergenic | 40.0% | |
| TACTTGCAGGTTTCTAAGCT+TGG | + | chr2_1:2291416-2291435 | Msa0187540:intron | 40.0% | |
| CAGGTTTCTAAGCTTGGATA+TGG | + | chr2_1:2291422-2291441 | Msa0187540:intron | 40.0% | |
| TAAGCTTGGATATGGATGCA+TGG | + | chr2_1:2291430-2291449 | Msa0187540:CDS | 40.0% | |
| AAGCTTGGATATGGATGCAT+GGG | + | chr2_1:2291431-2291450 | Msa0187540:CDS | 40.0% | |
| CTTTCCGACCAAAACTTCAT+TGG | - | chr2_1:2291573-2291592 | None:intergenic | 40.0% | |
| !! | CAATGAAGTTTTGGTCGGAA+AGG | + | chr2_1:2291571-2291590 | Msa0187540:CDS | 40.0% |
| GGGATTGTCAAAATGGAATC+TGG | + | chr2_1:2291761-2291780 | Msa0187540:CDS | 40.0% | |
| CAACATGATCGAACGTATTC+AGG | - | chr2_1:2291809-2291828 | None:intergenic | 40.0% | |
| ATACGTTCGATCATGTTGTG+AGG | + | chr2_1:2291811-2291830 | Msa0187540:CDS | 40.0% | |
| TACGTTCGATCATGTTGTGA+GGG | + | chr2_1:2291812-2291831 | Msa0187540:CDS | 40.0% | |
| TTACTCACAGTGTCCTCAAT+GGG | - | chr2_1:2291905-2291924 | None:intergenic | 40.0% | |
| ATTACTCACAGTGTCCTCAA+TGG | - | chr2_1:2291906-2291925 | None:intergenic | 40.0% | |
| ! | GCTTAAGAAGTTGGTTGAAG+AGG | + | chr2_1:2292012-2292031 | Msa0187540:CDS | 40.0% |
| TCCATTTGGACAGCAGTAAT+GGG | - | chr2_1:2292106-2292125 | None:intergenic | 40.0% | |
| TTCCATTTGGACAGCAGTAA+TGG | - | chr2_1:2292107-2292126 | None:intergenic | 40.0% | |
| TTACTGCTGTCCAAATGGAA+TGG | + | chr2_1:2292107-2292126 | Msa0187540:CDS | 40.0% | |
| TCCAAATGGAATGGTCTCTT+TGG | + | chr2_1:2292116-2292135 | Msa0187540:CDS | 40.0% | |
| TCCAAAGAGACCATTCCATT+TGG | - | chr2_1:2292120-2292139 | None:intergenic | 40.0% | |
| ATCAGTTAGGTACCTGCAAA+GGG | - | chr2_1:2292170-2292189 | None:intergenic | 40.0% | |
| AATCAGTTAGGTACCTGCAA+AGG | - | chr2_1:2292171-2292190 | None:intergenic | 40.0% | |
| AAGCAAAGACTGCACAAAAG+TGG | + | chr2_1:2292586-2292605 | Msa0187540:intron | 40.0% | |
| AGCAAAGACTGCACAAAAGT+GGG | + | chr2_1:2292587-2292606 | Msa0187540:intron | 40.0% | |
| ATCATGCTGTTGGTATTCCT+TGG | - | chr2_1:2292767-2292786 | None:intergenic | 40.0% | |
| AAGGCTTTCAATCATGCTGT+TGG | - | chr2_1:2292777-2292796 | None:intergenic | 40.0% | |
| AAGAATCAGTCTCAATCCAG+AGG | + | chr2_1:2292808-2292827 | Msa0187540:intron | 40.0% | |
| AGGTTATGCTTCTGCTTTAG+AGG | - | chr2_1:2292892-2292911 | None:intergenic | 40.0% | |
| !!! | GGGGTTTTTTCTCAGAACAT+AGG | - | chr2_1:2292912-2292931 | None:intergenic | 40.0% |
| ! | TGCTCAAGCTAAGTTTCTAG+GGG | - | chr2_1:2292931-2292950 | None:intergenic | 40.0% |
| GATGCTCAAGCTAAGTTTCT+AGG | - | chr2_1:2292933-2292952 | None:intergenic | 40.0% | |
| ! | AACTGTGATGGTTCTGCTAT+TGG | - | chr2_1:2292993-2293012 | None:intergenic | 40.0% |
| TGGACCAAGATAAACTGTGA+TGG | - | chr2_1:2293005-2293024 | None:intergenic | 40.0% | |
| !! | AGAGTATTGCTGAAGTCAAG+TGG | - | chr2_1:2293046-2293065 | None:intergenic | 40.0% |
| !! | TTCACTCTTCTAGCTTTCAG+AGG | + | chr2_1:2293065-2293084 | Msa0187540:intron | 40.0% |
| !! | TCACTCTTCTAGCTTTCAGA+GGG | + | chr2_1:2293066-2293085 | Msa0187540:intron | 40.0% |
| ! | TCTGAAATCTGCCATAACAG+CGG | + | chr2_1:2293109-2293128 | Msa0187540:intron | 40.0% |
| CTACACTCTTGCTTTAGTCA+AGG | - | chr2_1:2293138-2293157 | None:intergenic | 40.0% | |
| CAGTAGTAAACTGAAGAGCA+TGG | - | chr2_1:2293201-2293220 | None:intergenic | 40.0% | |
| AATCTCATCATGGGAGGAAT+AGG | - | chr2_1:2293314-2293333 | None:intergenic | 40.0% | |
| AACTGCCTGAATCTCATCAT+GGG | - | chr2_1:2293323-2293342 | None:intergenic | 40.0% | |
| TAACTGCCTGAATCTCATCA+TGG | - | chr2_1:2293324-2293343 | None:intergenic | 40.0% | |
| TTCCATAGTTGTGTAGTGAC+AGG | + | chr2_1:2293383-2293402 | Msa0187540:intron | 40.0% | |
| GATCCACAATAAGCTTCCTA+CGG | - | chr2_1:2293503-2293522 | Msa0187550:CDS | 40.0% | |
| AATACTAGCACCTGCTAAGA+AGG | + | chr2_1:2293594-2293613 | Msa0187540:intron | 40.0% | |
| GCATTCCAATTCAGCTTATC+AGG | + | chr2_1:2293655-2293674 | Msa0187540:intron | 40.0% | |
| TCTCTATTCACAAACTCCTC+AGG | + | chr2_1:2293730-2293749 | Msa0187540:intron | 40.0% | |
| TGAGCATTTGCATGATAGAC+TGG | - | chr2_1:2293800-2293819 | Msa0187550:CDS | 40.0% | |
| AGTCTATCATGCAAATGCTC+AGG | + | chr2_1:2293799-2293818 | Msa0187540:intron | 40.0% | |
| GTCTATCATGCAAATGCTCA+GGG | + | chr2_1:2293800-2293819 | Msa0187540:intron | 40.0% | |
| AGATTCCAAAGCTCTGTGAT+GGG | + | chr2_1:2293823-2293842 | Msa0187540:intron | 40.0% | |
| ATGGCAGTACAGTGCATTTA+TGG | - | chr2_1:2293870-2293889 | Msa0187550:CDS | 40.0% | |
| TTGGATCGGAATGAAATCTC+TGG | - | chr2_1:2293932-2293951 | None:intergenic | 40.0% | |
| CTGACCATTGTGTAAGAATC+TGG | + | chr2_1:2293981-2294000 | Msa0187540:intron | 40.0% | |
| AGAGCCAGATTCTTACACAA+TGG | - | chr2_1:2293988-2294007 | None:intergenic | 40.0% | |
| ! | AGACCTTATCCTCTAAAAGG+CGG | + | chr2_1:2294020-2294039 | Msa0187540:intron | 40.0% |
| TCCCTCACATTCAACACTAT+TGG | + | chr2_1:2294066-2294085 | Msa0187540:intron | 40.0% | |
| ! | CCCAATAGTGTTGAATGTGA+GGG | - | chr2_1:2294070-2294089 | None:intergenic | 40.0% |
| CCCTCACATTCAACACTATT+GGG | + | chr2_1:2294067-2294086 | Msa0187540:intron | 40.0% | |
| ACATTCAACACTATTGGGCT+TGG | + | chr2_1:2294072-2294091 | Msa0187540:intron | 40.0% | |
| !! | GGCTTGGTGTGTGAATAATT+TGG | + | chr2_1:2294088-2294107 | Msa0187540:intron | 40.0% |
| CGACCTCTGTTAGAATTTGT+TGG | - | chr2_1:2294354-2294373 | None:intergenic | 40.0% | |
| AACAAACATTAAGGGCTGAG+TGG | + | chr2_1:2294505-2294524 | Msa0187540:intron | 40.0% | |
| GCACCATCACATGAAACAAA+AGG | - | chr2_1:2294658-2294677 | None:intergenic | 40.0% | |
| TCGAAATGACTTCGGTTGTT+TGG | + | chr2_1:2294836-2294855 | Msa0187540:intron | 40.0% | |
| ! | TGTTTGGTGACAACTCTTAC+AGG | + | chr2_1:2294852-2294871 | Msa0187540:intron | 40.0% |
| ! | GTTTGGTGACAACTCTTACA+GGG | + | chr2_1:2294853-2294872 | Msa0187540:intron | 40.0% |
| !! | ACAGTTTTCTGGTATGGACT+TGG | + | chr2_1:2294960-2294979 | Msa0187540:intron | 40.0% |
| ! | ATGAGACTGTTTAGGACTCT+AGG | - | chr2_1:2295123-2295142 | None:intergenic | 40.0% |
| CAATGCAACCAAGGTTACAA+GGG | + | chr2_1:2295230-2295249 | Msa0187540:CDS | 40.0% | |
| AATGCAACCAAGGTTACAAG+GGG | + | chr2_1:2295231-2295250 | Msa0187540:CDS | 40.0% | |
| ! | AAGTTTTCCCCTTGTAACCT+TGG | - | chr2_1:2295241-2295260 | None:intergenic | 40.0% |
| CTTGCATGGATTCTTCATCA+AGG | + | chr2_1:2295340-2295359 | Msa0187540:CDS | 40.0% | |
| AAGTGGAAAGTTACTCACCA+GGG | - | chr2_1:2295384-2295403 | None:intergenic | 40.0% | |
| AAAGTGGAAAGTTACTCACC+AGG | - | chr2_1:2295385-2295404 | None:intergenic | 40.0% | |
| !! | AACTTGTTGAGGTCACAAAG+TGG | - | chr2_1:2295401-2295420 | None:intergenic | 40.0% |
| CTTTGTGACCTCAACAAGTT+AGG | + | chr2_1:2295401-2295420 | Msa0187540:intron | 40.0% | |
| !! | CATAGATGCCTAACTTGTTG+AGG | - | chr2_1:2295412-2295431 | None:intergenic | 40.0% |
| CTCAACAAGTTAGGCATCTA+TGG | + | chr2_1:2295410-2295429 | Msa0187540:intron | 40.0% | |
| TTGTTCCTACAACACATGAC+AGG | - | chr2_1:2295576-2295595 | None:intergenic | 40.0% | |
| ! | AATGGTAGTAGTGGGATTGG+TGG | + | chr2_1:2291090-2291109 | Msa0187540:five_prime_UTR | 45.0% |
| GTAGGTGAACCTAACTCTTG+GGG | - | chr2_1:2291130-2291149 | None:intergenic | 45.0% | |
| GGTAGGTGAACCTAACTCTT+GGG | - | chr2_1:2291131-2291150 | None:intergenic | 45.0% | |
| TGGTAGGTGAACCTAACTCT+TGG | - | chr2_1:2291132-2291151 | None:intergenic | 45.0% | |
| !! | TATTGATAGTGGCAGCTGGT+AGG | - | chr2_1:2291148-2291167 | None:intergenic | 45.0% |
| AGGGTAGTCTTCAACGTCTT+GGG | + | chr2_1:2291831-2291850 | Msa0187540:CDS | 45.0% | |
| ! | TGGGAACAGTGGTGTCAATA+CGG | - | chr2_1:2291886-2291905 | None:intergenic | 45.0% |
| GATGGGAGAGCTTAAGAAGT+TGG | + | chr2_1:2292003-2292022 | Msa0187540:intron | 45.0% | |
| TCCCATTACTGCTGTCCAAA+TGG | + | chr2_1:2292102-2292121 | Msa0187540:CDS | 45.0% | |
| CTGCAAAGGGGAACAATATC+TGG | - | chr2_1:2292157-2292176 | None:intergenic | 45.0% | |
| CAGATATTGTTCCCCTTTGC+AGG | + | chr2_1:2292155-2292174 | Msa0187540:CDS | 45.0% | |
| TCAGTTAGGTACCTGCAAAG+GGG | - | chr2_1:2292169-2292188 | None:intergenic | 45.0% | |
| AAAGACTGCACAAAAGTGGG+AGG | + | chr2_1:2292590-2292609 | Msa0187540:intron | 45.0% | |
| TATGTTCTCCTCTCAGTGGT+GGG | - | chr2_1:2292621-2292640 | None:intergenic | 45.0% | |
| ATGCTATGTTCTCCTCTCAG+TGG | - | chr2_1:2292625-2292644 | None:intergenic | 45.0% | |
| CTTGGAGAATGCAAGCTAGA+TGG | - | chr2_1:2292749-2292768 | None:intergenic | 45.0% | |
| ! | CATCTAGCTTGCATTCTCCA+AGG | + | chr2_1:2292747-2292766 | Msa0187540:intron | 45.0% |
| ! | AGTGAGCAAGCTTGTTCAAC+AGG | - | chr2_1:2293288-2293307 | None:intergenic | 45.0% |
| TTCCTCCCATGATGAGATTC+AGG | + | chr2_1:2293315-2293334 | Msa0187540:intron | 45.0% | |
| TGAGATTCAGGCAGTTAGAG+AGG | + | chr2_1:2293327-2293346 | Msa0187540:intron | 45.0% | |
| GTCCTGTCACTACACAACTA+TGG | - | chr2_1:2293388-2293407 | Msa0187550:CDS | 45.0% | |
| ! | TCCATTGTTGCTTCTGCAAC+AGG | - | chr2_1:2293445-2293464 | Msa0187550:CDS | 45.0% |
| CATCCGTAGGAAGCTTATTG+TGG | + | chr2_1:2293497-2293516 | Msa0187540:intron | 45.0% | |
| TCTCCAGACAATGAAAGCTC+TGG | + | chr2_1:2293525-2293544 | Msa0187540:intron | 45.0% | |
| !! | CAGACAATGAAAGCTCTGGA+GGG | + | chr2_1:2293529-2293548 | Msa0187540:intron | 45.0% |
| TTCCACAAGAGCTTATGCCA+AGG | + | chr2_1:2293565-2293584 | Msa0187540:intron | 45.0% | |
| TTCCTTGGCATAAGCTCTTG+TGG | - | chr2_1:2293570-2293589 | Msa0187550:CDS | 45.0% | |
| ! | GTGCTAGTATTCAGGTTCCT+TGG | - | chr2_1:2293585-2293604 | Msa0187550:CDS | 45.0% |
| CTTAGCAGGTGCTAGTATTC+AGG | - | chr2_1:2293593-2293612 | Msa0187550:CDS | 45.0% | |
| TTAGCCTACTCCTTCTTAGC+AGG | - | chr2_1:2293607-2293626 | Msa0187550:CDS | 45.0% | |
| CTGGTCCTGATAAGCTGAAT+TGG | - | chr2_1:2293663-2293682 | Msa0187550:CDS | 45.0% | |
| CAATTCAGCTTATCAGGACC+AGG | + | chr2_1:2293661-2293680 | Msa0187540:intron | 45.0% | |
| TTATCAGGACCAGGATCAGA+GGG | + | chr2_1:2293670-2293689 | Msa0187540:intron | 45.0% | |
| GAGATTCCAAAGCTCTGTGA+TGG | + | chr2_1:2293822-2293841 | Msa0187540:intron | 45.0% | |
| TCAACTTGGACTATAGGGGA+TGG | - | chr2_1:2293889-2293908 | Msa0187550:CDS | 45.0% | |
| CATTCCGATCCAAACAGATG+AGG | + | chr2_1:2293939-2293958 | Msa0187540:intron | 45.0% | |
| ! | GACCTTATCCTCTAAAAGGC+GGG | + | chr2_1:2294021-2294040 | Msa0187540:intron | 45.0% |
| ! | GCCCAATAGTGTTGAATGTG+AGG | - | chr2_1:2294071-2294090 | None:intergenic | 45.0% |
| GACAACTCTTACAGGGAACT+TGG | + | chr2_1:2294860-2294879 | Msa0187540:intron | 45.0% | |
| TCTTACAGGGAACTTGGCAT+TGG | + | chr2_1:2294866-2294885 | Msa0187540:intron | 45.0% | |
| TCCAAAAAATCCACGGCCAA+GGG | - | chr2_1:2294909-2294928 | None:intergenic | 45.0% | |
| CCTTGCCTCCAAAAAATCCA+CGG | - | chr2_1:2294916-2294935 | None:intergenic | 45.0% | |
| ! | TGTACCTGCAGACAGTTTTC+TGG | + | chr2_1:2294949-2294968 | Msa0187540:CDS | 45.0% |
| CATACCAGAAAACTGTCTGC+AGG | - | chr2_1:2294956-2294975 | None:intergenic | 45.0% | |
| !! | CTGCAGACAGTTTTCTGGTA+TGG | + | chr2_1:2294954-2294973 | Msa0187540:intron | 45.0% |
| GAACAAGGACCTGTTTGGAT+TGG | - | chr2_1:2295179-2295198 | None:intergenic | 45.0% | |
| CCTGGTGAAAAAAGAGATGC+TGG | - | chr2_1:2295210-2295229 | None:intergenic | 45.0% | |
| !!! | CCAGCATCTCTTTTTTCACC+AGG | + | chr2_1:2295207-2295226 | Msa0187540:intron | 45.0% |
| GCAATGCAACCAAGGTTACA+AGG | + | chr2_1:2295229-2295248 | Msa0187540:CDS | 45.0% | |
| ! | CTTCACAACTTGCTCTTGCA+TGG | + | chr2_1:2295326-2295345 | Msa0187540:CDS | 45.0% |
| GAAAGTTACTCACCAGGGAT+GGG | - | chr2_1:2295379-2295398 | None:intergenic | 45.0% | |
| TGCAACCTGTCATGTGTTGT+AGG | + | chr2_1:2295568-2295587 | Msa0187540:intron | 45.0% | |
| AGATGCTGTGCCAATATCTG+AGG | + | chr2_1:2295672-2295691 | Msa0187540:CDS | 45.0% | |
| ! | TGCCAATATCTGAGGTGTCA+GGG | + | chr2_1:2295680-2295699 | Msa0187540:CDS | 45.0% |
| CATATTCCTCGGGTGAAGCT+TGG | + | chr2_1:2291305-2291324 | Msa0187540:CDS | 50.0% | |
| CAGCGTTGTATACTCCAGTG+AGG | - | chr2_1:2291457-2291476 | None:intergenic | 50.0% | |
| GAGGGTAGTCTTCAACGTCT+TGG | + | chr2_1:2291830-2291849 | Msa0187540:CDS | 50.0% | |
| GGGTAGTCTTCAACGTCTTG+GGG | + | chr2_1:2291832-2291851 | Msa0187540:CDS | 50.0% | |
| TGACACCACTGTTCCCATTG+AGG | + | chr2_1:2291889-2291908 | Msa0187540:CDS | 50.0% | |
| AGTGTCCTCAATGGGAACAG+TGG | - | chr2_1:2291897-2291916 | None:intergenic | 50.0% | |
| CTATGTTCTCCTCTCAGTGG+TGG | - | chr2_1:2292622-2292641 | None:intergenic | 50.0% | |
| !!! | CAGGGCTGCTGCTTTTTCAA+TGG | + | chr2_1:2292842-2292861 | Msa0187540:intron | 50.0% |
| TTTATCTTGGTCCAGCCAGC+AGG | + | chr2_1:2293011-2293030 | Msa0187540:intron | 50.0% | |
| TGCCTGAATCTCATCATGGG+AGG | - | chr2_1:2293320-2293339 | None:intergenic | 50.0% | |
| GCCTGTTGCAGAAGCAACAA+TGG | + | chr2_1:2293441-2293460 | Msa0187540:intron | 50.0% | |
| CCTCCAGAGCTTTCATTGTC+TGG | - | chr2_1:2293531-2293550 | Msa0187550:CDS | 50.0% | |
| ! | CCAGACAATGAAAGCTCTGG+AGG | + | chr2_1:2293528-2293547 | Msa0187540:intron | 50.0% |
| !! | ACAATGAAAGCTCTGGAGGG+TGG | + | chr2_1:2293532-2293551 | Msa0187540:intron | 50.0% |
| AGCACCTGCTAAGAAGGAGT+AGG | + | chr2_1:2293600-2293619 | Msa0187540:intron | 50.0% | |
| CTTATCAGGACCAGGATCAG+AGG | + | chr2_1:2293669-2293688 | Msa0187540:intron | 50.0% | |
| !! | GTCCCGCCTTTTAGAGGATA+AGG | - | chr2_1:2294026-2294045 | None:intergenic | 50.0% |
| ! | ATCGAAGTCCCGCCTTTTAG+AGG | - | chr2_1:2294032-2294051 | None:intergenic | 50.0% |
| ATAGTGCCTTACAGTCCCCT+TGG | + | chr2_1:2294890-2294909 | Msa0187540:CDS | 50.0% | |
| CCAAAAAATCCACGGCCAAG+GGG | - | chr2_1:2294908-2294927 | None:intergenic | 50.0% | |
| CTCCAAAAAATCCACGGCCA+AGG | - | chr2_1:2294910-2294929 | None:intergenic | 50.0% | |
| !!! | CTTGGCCGTGGATTTTTTGG+AGG | + | chr2_1:2294908-2294927 | Msa0187540:CDS | 50.0% |
| !!! | CCGTGGATTTTTTGGAGGCA+AGG | + | chr2_1:2294913-2294932 | Msa0187540:CDS | 50.0% |
| TTCACCAGGCAATGCAACCA+AGG | + | chr2_1:2295221-2295240 | Msa0187540:intron | 50.0% | |
| GTAACCTTGGTTGCATTGCC+TGG | - | chr2_1:2295228-2295247 | None:intergenic | 50.0% | |
| TCGGATGGAAAAGTTGGCAC+AGG | + | chr2_1:2295285-2295304 | Msa0187540:CDS | 50.0% | |
| AAGTTGGCACAGGAGAAGCA+TGG | + | chr2_1:2295295-2295314 | Msa0187540:CDS | 50.0% | |
| GGAAAGTTACTCACCAGGGA+TGG | - | chr2_1:2295380-2295399 | None:intergenic | 50.0% | |
| ! | GTGCCAATATCTGAGGTGTC+AGG | + | chr2_1:2295679-2295698 | Msa0187540:CDS | 50.0% |
| ! | GCCAATATCTGAGGTGTCAG+GGG | + | chr2_1:2295681-2295700 | Msa0187540:CDS | 50.0% |
| TCCCCTGACACCTCAGATAT+TGG | - | chr2_1:2295685-2295704 | None:intergenic | 50.0% | |
| ! | TATCTGAGGTGTCAGGGGAT+CGG | + | chr2_1:2295686-2295705 | Msa0187540:CDS | 50.0% |
| TTCGCAGCTCTCTCCAAACA+AGG | - | chr2_1:2295995-2296014 | None:intergenic | 50.0% | |
| ATGACACCGCCCCAAGAGTT+AGG | + | chr2_1:2291118-2291137 | Msa0187540:five_prime_UTR | 55.0% | |
| GGTGAACCTAACTCTTGGGG+CGG | - | chr2_1:2291127-2291146 | None:intergenic | 55.0% | |
| TATGGATGCATGGGCCTCAC+TGG | + | chr2_1:2291440-2291459 | Msa0187540:CDS | 55.0% | |
| TCCAGAGGTTCGCAATGTGC+AGG | + | chr2_1:2292823-2292842 | Msa0187540:intron | 55.0% | |
| CCAGAGGTTCGCAATGTGCA+GGG | + | chr2_1:2292824-2292843 | Msa0187540:intron | 55.0% | |
| !! | AGTCAAGGGCACCGCTGTTA+TGG | - | chr2_1:2293123-2293142 | None:intergenic | 55.0% |
| ATCACTCTGCCCTCTGATCC+TGG | - | chr2_1:2293682-2293701 | Msa0187550:CDS | 55.0% | |
| AGCAGCCCATCACAGAGCTT+TGG | - | chr2_1:2293831-2293850 | Msa0187550:CDS | 55.0% | |
| !!! | CCCCTTGGCCGTGGATTTTT+TGG | + | chr2_1:2294905-2294924 | Msa0187540:CDS | 55.0% |
| TGGCTTCCAAGCTTCACCCG+AGG | - | chr2_1:2291314-2291333 | None:intergenic | 60.0% | |
| CGGGTGAAGCTTGGAAGCCA+AGG | + | chr2_1:2291314-2291333 | Msa0187540:CDS | 60.0% | |
| AGGAAGCTCCCACCACTGAG+AGG | + | chr2_1:2292610-2292629 | Msa0187540:intron | 60.0% | |
| CCCTGCACATTGCGAACCTC+TGG | - | chr2_1:2292827-2292846 | None:intergenic | 60.0% | |
| ATCTTGGTCCAGCCAGCAGG+TGG | + | chr2_1:2293014-2293033 | Msa0187540:intron | 60.0% | |
| AAGTGGATGCCTCCACCTGC+TGG | - | chr2_1:2293029-2293048 | None:intergenic | 60.0% | |
| !! | TGGTGCTTGGTGTCTGCCTG+AGG | - | chr2_1:2293749-2293768 | Msa0187550:CDS | 60.0% |
| GACGATGTAGTGCCCATCCC+TGG | + | chr2_1:2295364-2295383 | Msa0187540:CDS | 60.0% | |
| GTGTCAGGGGATCGGACAAC+TGG | + | chr2_1:2295694-2295713 | Msa0187540:CDS | 60.0% | |
| TTGGTCCAGCCAGCAGGTGG+AGG | + | chr2_1:2293017-2293036 | Msa0187540:intron | 65.0% | |
| CCACGGCCAAGGGGACTGTA+AGG | - | chr2_1:2294899-2294918 | None:intergenic | 65.0% | |
| CCTTACAGTCCCCTTGGCCG+TGG | + | chr2_1:2294896-2294915 | Msa0187540:CDS | 65.0% | |
| GGATGCCTCCACCTGCTGGC+TGG | - | chr2_1:2293025-2293044 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 2291086 | 2296038 | 2291086 | ID=Msa0187540;Name=Msa0187540 |
| chr2_1 | mRNA | 2291086 | 2296038 | 2291086 | ID=Msa0187540-mRNA-1;Parent=Msa0187540;Name=Msa0187540-mRNA-1;_AED=0.36;_eAED=0.36;_QI=201|1|1|1|1|1|7|270|344 |
| chr2_1 | exon | 2291086 | 2291343 | 2291086 | ID=Msa0187540-mRNA-1:exon:1082;Parent=Msa0187540-mRNA-1 |
| chr2_1 | exon | 2291425 | 2291592 | 2291425 | ID=Msa0187540-mRNA-1:exon:1083;Parent=Msa0187540-mRNA-1 |
| chr2_1 | exon | 2291713 | 2291916 | 2291713 | ID=Msa0187540-mRNA-1:exon:1084;Parent=Msa0187540-mRNA-1 |
| chr2_1 | exon | 2292004 | 2292176 | 2292004 | ID=Msa0187540-mRNA-1:exon:1085;Parent=Msa0187540-mRNA-1 |
| chr2_1 | exon | 2294874 | 2294970 | 2294874 | ID=Msa0187540-mRNA-1:exon:1086;Parent=Msa0187540-mRNA-1 |
| chr2_1 | exon | 2295229 | 2295385 | 2295229 | ID=Msa0187540-mRNA-1:exon:1087;Parent=Msa0187540-mRNA-1 |
| chr2_1 | exon | 2295590 | 2296038 | 2295590 | ID=Msa0187540-mRNA-1:exon:1088;Parent=Msa0187540-mRNA-1 |
| chr2_1 | five_prime_UTR | 2291086 | 2291286 | 2291086 | ID=Msa0187540-mRNA-1:five_prime_utr;Parent=Msa0187540-mRNA-1 |
| chr2_1 | CDS | 2291287 | 2291343 | 2291287 | ID=Msa0187540-mRNA-1:cds;Parent=Msa0187540-mRNA-1 |
| chr2_1 | CDS | 2291425 | 2291592 | 2291425 | ID=Msa0187540-mRNA-1:cds;Parent=Msa0187540-mRNA-1 |
| chr2_1 | CDS | 2291713 | 2291916 | 2291713 | ID=Msa0187540-mRNA-1:cds;Parent=Msa0187540-mRNA-1 |
| chr2_1 | CDS | 2292004 | 2292176 | 2292004 | ID=Msa0187540-mRNA-1:cds;Parent=Msa0187540-mRNA-1 |
| chr2_1 | CDS | 2294874 | 2294970 | 2294874 | ID=Msa0187540-mRNA-1:cds;Parent=Msa0187540-mRNA-1 |
| chr2_1 | CDS | 2295229 | 2295385 | 2295229 | ID=Msa0187540-mRNA-1:cds;Parent=Msa0187540-mRNA-1 |
| chr2_1 | CDS | 2295590 | 2295768 | 2295590 | ID=Msa0187540-mRNA-1:cds;Parent=Msa0187540-mRNA-1 |
| chr2_1 | three_prime_UTR | 2295769 | 2296038 | 2295769 | ID=Msa0187540-mRNA-1:three_prime_utr;Parent=Msa0187540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
