AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0673160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0673160 MtrunA17_Chr4g0013611 98.701 77 1 0 32 108 846 922 6.42e-47 160
Msa0673160 MtrunA17_Chr4g0076951 75.949 79 15 3 32 108 837 913 1.56e-24 96.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0673160 AT1G59610.1 60.494 81 26 4 32 108 842 920 3.58e-16 73.2
Msa0673160 AT1G10290.1 64.634 82 22 5 32 108 835 914 1.63e-14 68.2

Find 46 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACCTGGTCCGCTGCTTCT+TGG 0.181499 4_4:-18990641 None:intergenic
GATACCATACTTCCGGAAAA+TGG 0.253079 4_4:-18991055 None:intergenic
TTGTTCCTGCCAGGATATTT+AGG 0.253408 4_4:+18990963 Msa0673160:three_prime_UTR
CCTGCTCCACCAGGTTCTTC+TGG 0.274221 4_4:+18990830 Msa0673160:CDS
GTAATTTGCTTTATAATCAT+TGG 0.307889 4_4:+18991189 Msa0673160:three_prime_UTR
ATTTCATACCTTTGAGGATA+AGG 0.327281 4_4:+18990925 Msa0673160:three_prime_UTR
GGATATTTAGGTGATGAAAA+AGG 0.338971 4_4:+18990975 Msa0673160:three_prime_UTR
GTACGACGGCTGCCAGAGTT+TGG 0.342978 4_4:-18990791 None:intergenic
CACCTGGTCCGCTGCTTCTT+GGG 0.361873 4_4:-18990640 None:intergenic
AATAGTGATCCTGCACAAAA+TGG 0.366696 4_4:+18990752 Msa0673160:CDS
TGTCCCATTTCATACCTTTG+AGG 0.382541 4_4:+18990919 Msa0673160:three_prime_UTR
TTATCCTCAAAGGTATGAAA+TGG 0.385637 4_4:-18990923 None:intergenic
CGCAATTCTTTGTTCCTGCC+AGG 0.390186 4_4:+18990954 Msa0673160:three_prime_UTR
CAAAATGGTGACTTGAACTC+TGG 0.405512 4_4:+18990767 Msa0673160:CDS
AGCCGTAGTGGTTCAAGATC+TGG 0.419145 4_4:+18990707 Msa0673160:CDS
TACGACGGCTGCCAGAGTTT+GGG 0.424574 4_4:-18990790 None:intergenic
CGAACTTGATACCATACTTC+CGG 0.437812 4_4:-18991062 None:intergenic
ATACCATACTTCCGGAAAAT+GGG 0.441384 4_4:-18991054 None:intergenic
AGCCCAAGAAGCAGCGGACC+AGG 0.448731 4_4:+18990638 Msa0673160:CDS
CTGGTGGAGCAGGTGGTAAT+CGG 0.450353 4_4:-18990820 None:intergenic
GCAGCGGACCAGGTGATGAC+TGG 0.462994 4_4:+18990648 Msa0673160:CDS
CCAGAAGAACCTGGTGGAGC+AGG 0.466061 4_4:-18990830 None:intergenic
GTACTCATTTACAGATTCAC+TGG 0.466527 4_4:+18990198 Msa0673160:CDS
TCTCATAAACCCATCAGAAA+TGG 0.468168 4_4:-18991220 None:intergenic
TTGAACTCTGGCCCAAACTC+TGG 0.469406 4_4:+18990779 Msa0673160:CDS
GATGGCGGCGTTAACGACTA+AGG 0.473196 4_4:+18990162 None:intergenic
GGTTCAAGATCTGGATCAAA+TGG 0.476115 4_4:+18990716 Msa0673160:CDS
GGAGCAGGTGGTAATCGGTT+AGG 0.496932 4_4:-18990815 None:intergenic
GGATAGCACACCATTTCTGA+TGG 0.506677 4_4:+18991210 Msa0673160:three_prime_UTR
TATCCTCAAAGGTATGAAAT+GGG 0.513679 4_4:-18990922 None:intergenic
GCCATTGCTAGCTGCATCAA+AGG 0.518187 4_4:-18990678 None:intergenic
GCCTTTGATGCAGCTAGCAA+TGG 0.529781 4_4:+18990677 Msa0673160:CDS
TTCAACAAAACATGAAATGA+CGG 0.545804 4_4:-18990873 None:intergenic
AATGGCTCTGTTAGCCGTAG+TGG 0.555895 4_4:+18990695 Msa0673160:CDS
CATCACCTAAATATCCTGGC+AGG 0.555960 4_4:-18990968 None:intergenic
CGATTACCACCTGCTCCACC+AGG 0.559073 4_4:+18990821 Msa0673160:CDS
ATCCAGATCTTGAACCACTA+CGG 0.569819 4_4:-18990709 None:intergenic
GATAGCACACCATTTCTGAT+GGG 0.577613 4_4:+18991211 Msa0673160:three_prime_UTR
TCAAAGGTATGAAATGGGAC+AGG 0.581695 4_4:-18990917 None:intergenic
CGACGAGACCTTATCCTCAA+AGG 0.587951 4_4:-18990933 None:intergenic
GCAGTTCTCCAGTCATCACC+TGG 0.592447 4_4:-18990656 None:intergenic
GAGAGTAGCCCAAGAAGCAG+CGG 0.610996 4_4:+18990632 Msa0673160:intron
GAAGAACCTGGTGGAGCAGG+TGG 0.619073 4_4:-18990827 None:intergenic
TATCTGTAACCAGAAGAACC+TGG 0.668384 4_4:-18990839 None:intergenic
CTGTAACCAGAAGAACCTGG+TGG 0.714812 4_4:-18990836 None:intergenic
GTAATCGGTTAGGAGTACGA+CGG 0.815501 4_4:-18990805 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACGGAAAATTAATATTAAT+TGG - chr4_4:18990542-18990561 None:intergenic 15.0%
!!! TTAGTATATATATGTTTTCT+GGG + chr4_4:18991026-18991045 Msa0673160:three_prime_UTR 15.0%
!! AACGGAAAATTAATATTAAT+TGG - chr4_4:18990542-18990561 None:intergenic 15.0%
!!! TTAGTATATATATGTTTTCT+GGG + chr4_4:18991026-18991045 Msa0673160:three_prime_UTR 15.0%
!!! AATTATCAGCATTCTTTTAA+TGG + chr4_4:18990228-18990247 Msa0673160:CDS 20.0%
!!! TAATCAAGGAAGATAATTTT+GGG - chr4_4:18990278-18990297 None:intergenic 20.0%
!!! TTAATCAAGGAAGATAATTT+TGG - chr4_4:18990279-18990298 None:intergenic 20.0%
!! ATTCTATTATCTTAATTACC+TGG + chr4_4:18990451-18990470 Msa0673160:intron 20.0%
!! AAGAAACAGATAAAACAAAA+CGG - chr4_4:18990560-18990579 None:intergenic 20.0%
!!! TTCATGTTTTGTTGAATTTT+TGG + chr4_4:18990880-18990899 Msa0673160:three_prime_UTR 20.0%
!!! GTTAGTATATATATGTTTTC+TGG + chr4_4:18991025-18991044 Msa0673160:three_prime_UTR 20.0%
!!! TACCATTTAATGTTTCTTTT+TGG + chr4_4:18991135-18991154 Msa0673160:three_prime_UTR 20.0%
!!! ACCATTTAATGTTTCTTTTT+GGG + chr4_4:18991136-18991155 Msa0673160:three_prime_UTR 20.0%
!!! GTAATTTGCTTTATAATCAT+TGG + chr4_4:18991189-18991208 Msa0673160:three_prime_UTR 20.0%
!!! AATTATCAGCATTCTTTTAA+TGG + chr4_4:18990228-18990247 Msa0673160:CDS 20.0%
!!! TAATCAAGGAAGATAATTTT+GGG - chr4_4:18990278-18990297 None:intergenic 20.0%
!!! TTAATCAAGGAAGATAATTT+TGG - chr4_4:18990279-18990298 None:intergenic 20.0%
!! ATTCTATTATCTTAATTACC+TGG + chr4_4:18990451-18990470 Msa0673160:intron 20.0%
!! AAGAAACAGATAAAACAAAA+CGG - chr4_4:18990560-18990579 None:intergenic 20.0%
!!! TTCATGTTTTGTTGAATTTT+TGG + chr4_4:18990880-18990899 Msa0673160:three_prime_UTR 20.0%
!!! GTTAGTATATATATGTTTTC+TGG + chr4_4:18991025-18991044 Msa0673160:three_prime_UTR 20.0%
!!! TACCATTTAATGTTTCTTTT+TGG + chr4_4:18991135-18991154 Msa0673160:three_prime_UTR 20.0%
!!! ACCATTTAATGTTTCTTTTT+GGG + chr4_4:18991136-18991155 Msa0673160:three_prime_UTR 20.0%
!!! GTAATTTGCTTTATAATCAT+TGG + chr4_4:18991189-18991208 Msa0673160:three_prime_UTR 20.0%
!! AATCAAGGAAGATAATTTTG+GGG - chr4_4:18990277-18990296 None:intergenic 25.0%
! TAGATTACTGTCATTAATCA+AGG - chr4_4:18990292-18990311 None:intergenic 25.0%
! ACTATTATCTATGCATGTAA+GGG - chr4_4:18990360-18990379 None:intergenic 25.0%
! TTCAACAAAACATGAAATGA+CGG - chr4_4:18990876-18990895 None:intergenic 25.0%
! TCCCAAAAAGAAACATTAAA+TGG - chr4_4:18991140-18991159 None:intergenic 25.0%
!! AATCAAGGAAGATAATTTTG+GGG - chr4_4:18990277-18990296 None:intergenic 25.0%
! TAGATTACTGTCATTAATCA+AGG - chr4_4:18990292-18990311 None:intergenic 25.0%
! ACTATTATCTATGCATGTAA+GGG - chr4_4:18990360-18990379 None:intergenic 25.0%
! TTCAACAAAACATGAAATGA+CGG - chr4_4:18990876-18990895 None:intergenic 25.0%
! TCCCAAAAAGAAACATTAAA+TGG - chr4_4:18991140-18991159 None:intergenic 25.0%
!! ATAATTTTGGGGACCTAAAA+AGG - chr4_4:18990266-18990285 None:intergenic 30.0%
GACTATTATCTATGCATGTA+AGG - chr4_4:18990361-18990380 None:intergenic 30.0%
GAATAGTTACAAAGTGCAAA+TGG - chr4_4:18990435-18990454 None:intergenic 30.0%
TTCTTCTACTTTGTGTACTT+AGG + chr4_4:18990593-18990612 Msa0673160:intron 30.0%
! TATCCTCAAAGGTATGAAAT+GGG - chr4_4:18990925-18990944 None:intergenic 30.0%
! TTATCCTCAAAGGTATGAAA+TGG - chr4_4:18990926-18990945 None:intergenic 30.0%
! ATTTCATACCTTTGAGGATA+AGG + chr4_4:18990925-18990944 Msa0673160:three_prime_UTR 30.0%
! TTTTCATCACCTAAATATCC+TGG - chr4_4:18990975-18990994 None:intergenic 30.0%
GGATATTTAGGTGATGAAAA+AGG + chr4_4:18990975-18990994 Msa0673160:three_prime_UTR 30.0%
!! ATAATTTTGGGGACCTAAAA+AGG - chr4_4:18990266-18990285 None:intergenic 30.0%
GACTATTATCTATGCATGTA+AGG - chr4_4:18990361-18990380 None:intergenic 30.0%
GAATAGTTACAAAGTGCAAA+TGG - chr4_4:18990435-18990454 None:intergenic 30.0%
TTCTTCTACTTTGTGTACTT+AGG + chr4_4:18990593-18990612 Msa0673160:intron 30.0%
! TATCCTCAAAGGTATGAAAT+GGG - chr4_4:18990925-18990944 None:intergenic 30.0%
! TTATCCTCAAAGGTATGAAA+TGG - chr4_4:18990926-18990945 None:intergenic 30.0%
! ATTTCATACCTTTGAGGATA+AGG + chr4_4:18990925-18990944 Msa0673160:three_prime_UTR 30.0%
! TTTTCATCACCTAAATATCC+TGG - chr4_4:18990975-18990994 None:intergenic 30.0%
GGATATTTAGGTGATGAAAA+AGG + chr4_4:18990975-18990994 Msa0673160:three_prime_UTR 30.0%
GTACTCATTTACAGATTCAC+TGG + chr4_4:18990198-18990217 Msa0673160:CDS 35.0%
!! AGCATTCTTTTAATGGACGA+GGG + chr4_4:18990235-18990254 Msa0673160:CDS 35.0%
! ACTGTTTTCTCGTCATATTC+TGG + chr4_4:18990322-18990341 Msa0673160:intron 35.0%
CAATGAATCTGAATTCGTCT+TGG + chr4_4:18990474-18990493 Msa0673160:intron 35.0%
AATAGTGATCCTGCACAAAA+TGG + chr4_4:18990752-18990771 Msa0673160:CDS 35.0%
ATACCATACTTCCGGAAAAT+GGG - chr4_4:18991057-18991076 None:intergenic 35.0%
TCTCATAAACCCATCAGAAA+TGG - chr4_4:18991223-18991242 None:intergenic 35.0%
GTACTCATTTACAGATTCAC+TGG + chr4_4:18990198-18990217 Msa0673160:CDS 35.0%
!! AGCATTCTTTTAATGGACGA+GGG + chr4_4:18990235-18990254 Msa0673160:CDS 35.0%
! ACTGTTTTCTCGTCATATTC+TGG + chr4_4:18990322-18990341 Msa0673160:intron 35.0%
CAATGAATCTGAATTCGTCT+TGG + chr4_4:18990474-18990493 Msa0673160:intron 35.0%
AATAGTGATCCTGCACAAAA+TGG + chr4_4:18990752-18990771 Msa0673160:CDS 35.0%
ATACCATACTTCCGGAAAAT+GGG - chr4_4:18991057-18991076 None:intergenic 35.0%
TCTCATAAACCCATCAGAAA+TGG - chr4_4:18991223-18991242 None:intergenic 35.0%
!! CAGCATTCTTTTAATGGACG+AGG + chr4_4:18990234-18990253 Msa0673160:CDS 40.0%
!!! GACGAGGGTATTTCCTTTTT+AGG + chr4_4:18990250-18990269 Msa0673160:intron 40.0%
ACGAATTCAGATTCATTGCC+AGG - chr4_4:18990472-18990491 None:intergenic 40.0%
ATCCAGATCTTGAACCACTA+CGG - chr4_4:18990712-18990731 None:intergenic 40.0%
GGTTCAAGATCTGGATCAAA+TGG + chr4_4:18990716-18990735 Msa0673160:CDS 40.0%
! TTCAAGTCACCATTTTGTGC+AGG - chr4_4:18990764-18990783 None:intergenic 40.0%
CAAAATGGTGACTTGAACTC+TGG + chr4_4:18990767-18990786 Msa0673160:CDS 40.0%
TATCTGTAACCAGAAGAACC+TGG - chr4_4:18990842-18990861 None:intergenic 40.0%
! TCAAAGGTATGAAATGGGAC+AGG - chr4_4:18990920-18990939 None:intergenic 40.0%
TGTCCCATTTCATACCTTTG+AGG + chr4_4:18990919-18990938 Msa0673160:three_prime_UTR 40.0%
TTGTTCCTGCCAGGATATTT+AGG + chr4_4:18990963-18990982 Msa0673160:three_prime_UTR 40.0%
GATACCATACTTCCGGAAAA+TGG - chr4_4:18991058-18991077 None:intergenic 40.0%
CGAACTTGATACCATACTTC+CGG - chr4_4:18991065-18991084 None:intergenic 40.0%
GATAGCACACCATTTCTGAT+GGG + chr4_4:18991211-18991230 Msa0673160:three_prime_UTR 40.0%
!! CAGCATTCTTTTAATGGACG+AGG + chr4_4:18990234-18990253 Msa0673160:CDS 40.0%
!!! GACGAGGGTATTTCCTTTTT+AGG + chr4_4:18990250-18990269 Msa0673160:intron 40.0%
ACGAATTCAGATTCATTGCC+AGG - chr4_4:18990472-18990491 None:intergenic 40.0%
ATCCAGATCTTGAACCACTA+CGG - chr4_4:18990712-18990731 None:intergenic 40.0%
GGTTCAAGATCTGGATCAAA+TGG + chr4_4:18990716-18990735 Msa0673160:CDS 40.0%
! TTCAAGTCACCATTTTGTGC+AGG - chr4_4:18990764-18990783 None:intergenic 40.0%
CAAAATGGTGACTTGAACTC+TGG + chr4_4:18990767-18990786 Msa0673160:CDS 40.0%
TATCTGTAACCAGAAGAACC+TGG - chr4_4:18990842-18990861 None:intergenic 40.0%
! TCAAAGGTATGAAATGGGAC+AGG - chr4_4:18990920-18990939 None:intergenic 40.0%
TGTCCCATTTCATACCTTTG+AGG + chr4_4:18990919-18990938 Msa0673160:three_prime_UTR 40.0%
TTGTTCCTGCCAGGATATTT+AGG + chr4_4:18990963-18990982 Msa0673160:three_prime_UTR 40.0%
GATACCATACTTCCGGAAAA+TGG - chr4_4:18991058-18991077 None:intergenic 40.0%
CGAACTTGATACCATACTTC+CGG - chr4_4:18991065-18991084 None:intergenic 40.0%
GATAGCACACCATTTCTGAT+GGG + chr4_4:18991211-18991230 Msa0673160:three_prime_UTR 40.0%
! GTAATCGGTTAGGAGTACGA+CGG - chr4_4:18990808-18990827 None:intergenic 45.0%
CATCACCTAAATATCCTGGC+AGG - chr4_4:18990971-18990990 None:intergenic 45.0%
! TGTCCCATTTTCCGGAAGTA+TGG + chr4_4:18991051-18991070 Msa0673160:three_prime_UTR 45.0%
GGATAGCACACCATTTCTGA+TGG + chr4_4:18991210-18991229 Msa0673160:three_prime_UTR 45.0%
! GTAATCGGTTAGGAGTACGA+CGG - chr4_4:18990808-18990827 None:intergenic 45.0%
CATCACCTAAATATCCTGGC+AGG - chr4_4:18990971-18990990 None:intergenic 45.0%
! TGTCCCATTTTCCGGAAGTA+TGG + chr4_4:18991051-18991070 Msa0673160:three_prime_UTR 45.0%
GGATAGCACACCATTTCTGA+TGG + chr4_4:18991210-18991229 Msa0673160:three_prime_UTR 45.0%
GCCTTTGATGCAGCTAGCAA+TGG + chr4_4:18990677-18990696 Msa0673160:CDS 50.0%
GCCATTGCTAGCTGCATCAA+AGG - chr4_4:18990681-18990700 None:intergenic 50.0%
! AATGGCTCTGTTAGCCGTAG+TGG + chr4_4:18990695-18990714 Msa0673160:CDS 50.0%
AGCCGTAGTGGTTCAAGATC+TGG + chr4_4:18990707-18990726 Msa0673160:CDS 50.0%
TTGAACTCTGGCCCAAACTC+TGG + chr4_4:18990779-18990798 Msa0673160:CDS 50.0%
CTGTAACCAGAAGAACCTGG+TGG - chr4_4:18990839-18990858 None:intergenic 50.0%
CGACGAGACCTTATCCTCAA+AGG - chr4_4:18990936-18990955 None:intergenic 50.0%
CGCAATTCTTTGTTCCTGCC+AGG + chr4_4:18990954-18990973 Msa0673160:three_prime_UTR 50.0%
! TCTGGGCTTGTCCCATTTTC+CGG + chr4_4:18991043-18991062 Msa0673160:three_prime_UTR 50.0%
GCCTTTGATGCAGCTAGCAA+TGG + chr4_4:18990677-18990696 Msa0673160:CDS 50.0%
GCCATTGCTAGCTGCATCAA+AGG - chr4_4:18990681-18990700 None:intergenic 50.0%
! AATGGCTCTGTTAGCCGTAG+TGG + chr4_4:18990695-18990714 Msa0673160:CDS 50.0%
AGCCGTAGTGGTTCAAGATC+TGG + chr4_4:18990707-18990726 Msa0673160:CDS 50.0%
TTGAACTCTGGCCCAAACTC+TGG + chr4_4:18990779-18990798 Msa0673160:CDS 50.0%
CTGTAACCAGAAGAACCTGG+TGG - chr4_4:18990839-18990858 None:intergenic 50.0%
CGACGAGACCTTATCCTCAA+AGG - chr4_4:18990936-18990955 None:intergenic 50.0%
CGCAATTCTTTGTTCCTGCC+AGG + chr4_4:18990954-18990973 Msa0673160:three_prime_UTR 50.0%
! TCTGGGCTTGTCCCATTTTC+CGG + chr4_4:18991043-18991062 Msa0673160:three_prime_UTR 50.0%
GAGAGTAGCCCAAGAAGCAG+CGG + chr4_4:18990632-18990651 Msa0673160:intron 55.0%
GCAGTTCTCCAGTCATCACC+TGG - chr4_4:18990659-18990678 None:intergenic 55.0%
TACGACGGCTGCCAGAGTTT+GGG - chr4_4:18990793-18990812 None:intergenic 55.0%
GGAGCAGGTGGTAATCGGTT+AGG - chr4_4:18990818-18990837 None:intergenic 55.0%
CTGGTGGAGCAGGTGGTAAT+CGG - chr4_4:18990823-18990842 None:intergenic 55.0%
GAGAGTAGCCCAAGAAGCAG+CGG + chr4_4:18990632-18990651 Msa0673160:intron 55.0%
GCAGTTCTCCAGTCATCACC+TGG - chr4_4:18990659-18990678 None:intergenic 55.0%
TACGACGGCTGCCAGAGTTT+GGG - chr4_4:18990793-18990812 None:intergenic 55.0%
GGAGCAGGTGGTAATCGGTT+AGG - chr4_4:18990818-18990837 None:intergenic 55.0%
CTGGTGGAGCAGGTGGTAAT+CGG - chr4_4:18990823-18990842 None:intergenic 55.0%
CACCTGGTCCGCTGCTTCTT+GGG - chr4_4:18990643-18990662 None:intergenic 60.0%
TCACCTGGTCCGCTGCTTCT+TGG - chr4_4:18990644-18990663 None:intergenic 60.0%
GTACGACGGCTGCCAGAGTT+TGG - chr4_4:18990794-18990813 None:intergenic 60.0%
CGATTACCACCTGCTCCACC+AGG + chr4_4:18990821-18990840 Msa0673160:CDS 60.0%
GAAGAACCTGGTGGAGCAGG+TGG - chr4_4:18990830-18990849 None:intergenic 60.0%
CCAGAAGAACCTGGTGGAGC+AGG - chr4_4:18990833-18990852 None:intergenic 60.0%
CCTGCTCCACCAGGTTCTTC+TGG + chr4_4:18990830-18990849 Msa0673160:CDS 60.0%
CACCTGGTCCGCTGCTTCTT+GGG - chr4_4:18990643-18990662 None:intergenic 60.0%
TCACCTGGTCCGCTGCTTCT+TGG - chr4_4:18990644-18990663 None:intergenic 60.0%
GTACGACGGCTGCCAGAGTT+TGG - chr4_4:18990794-18990813 None:intergenic 60.0%
CGATTACCACCTGCTCCACC+AGG + chr4_4:18990821-18990840 Msa0673160:CDS 60.0%
GAAGAACCTGGTGGAGCAGG+TGG - chr4_4:18990830-18990849 None:intergenic 60.0%
CCAGAAGAACCTGGTGGAGC+AGG - chr4_4:18990833-18990852 None:intergenic 60.0%
CCTGCTCCACCAGGTTCTTC+TGG + chr4_4:18990830-18990849 Msa0673160:CDS 60.0%
AGCCCAAGAAGCAGCGGACC+AGG + chr4_4:18990638-18990657 Msa0673160:CDS 65.0%
GCAGCGGACCAGGTGATGAC+TGG + chr4_4:18990648-18990667 Msa0673160:CDS 65.0%
AGCCCAAGAAGCAGCGGACC+AGG + chr4_4:18990638-18990657 Msa0673160:CDS 65.0%
GCAGCGGACCAGGTGATGAC+TGG + chr4_4:18990648-18990667 Msa0673160:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 18990163 18991280 18990163 ID=Msa0673160;Name=Msa0673160
chr4_4 mRNA 18990163 18991280 18990163 ID=Msa0673160-mRNA-1;Parent=Msa0673160;Name=Msa0673160-mRNA-1;_AED=0.51;_eAED=0.51;_QI=0|0|0.5|0.5|1|1|2|415|108
chr4_4 exon 18990163 18990256 18990163 ID=Msa0673160-mRNA-1:exon:5523;Parent=Msa0673160-mRNA-1
chr4_4 exon 18990633 18991280 18990633 ID=Msa0673160-mRNA-1:exon:5524;Parent=Msa0673160-mRNA-1
chr4_4 CDS 18990163 18990256 18990163 ID=Msa0673160-mRNA-1:cds;Parent=Msa0673160-mRNA-1
chr4_4 CDS 18990633 18990865 18990633 ID=Msa0673160-mRNA-1:cds;Parent=Msa0673160-mRNA-1
chr4_4 three_prime_UTR 18990866 18991280 18990866 ID=Msa0673160-mRNA-1:three_prime_utr;Parent=Msa0673160-mRNA-1
Gene Sequence

>Msa0673160

ATGGCGGCGTTAACGACTAAGGTCGACGACTATTTGTACTCATTTACAGATTCACTGGATGACTCAATTATCAGCATTCTTTTAATGGACGAGGAGAGTAGCCCAAGAAGCAGCGGACCAGGTGATGACTGGAGAACTGCCTTTGATGCAGCTAGCAATGGCTCTGTTAGCCGTAGTGGTTCAAGATCTGGATCAAATGGTCATAGTCGACATAATAGTGATCCTGCACAAAATGGTGACTTGAACTCTGGCCCAAACTCTGGCAGCCGTCGTACTCCTAACCGATTACCACCTGCTCCACCAGGTTCTTCTGGTTACAGATATTAA
Protein sequence

>Msa0673160

MAALTTKVDDYLYSFTDSLDDSIISILLMDEESSPRSSGPGDDWRTAFDAASNGSVSRSGSRSGSNGHSRHNSDPAQNGDLNSGPNSGSRRTPNRLPPAPPGSSGYRY*