Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340460 | AES71324.2 | 79.899 | 398 | 10 | 5 | 1 | 328 | 4 | 401 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340460 | sp|P77806|YBDL_ECOLI | 34.857 | 350 | 186 | 7 | 17 | 325 | 37 | 385 | 4.70e-64 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340460 | A0A396IWX1 | 79.899 | 398 | 10 | 5 | 1 | 328 | 410 | 807 | 0.0 | 617 |
| Msa1340460 | A0A396IWX1 | 80.068 | 296 | 28 | 5 | 18 | 290 | 41 | 328 | 4.69e-152 | 456 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032470 | Msa1340460 | -0.821529 | 3.847007e-53 | -8.615850e-47 |
| Msa0673160 | Msa1340460 | -0.808815 | 2.572503e-50 | -8.615850e-47 |
| Msa0137480 | Msa1340460 | -0.809845 | 1.547098e-50 | -8.615850e-47 |
| Msa0148080 | Msa1340460 | -0.804797 | 1.817919e-49 | -8.615850e-47 |
| Msa0180510 | Msa1340460 | 0.806861 | 6.697996e-50 | -8.615850e-47 |
| Msa0236510 | Msa1340460 | 0.813456 | 2.535818e-51 | -8.615850e-47 |
| Msa1244720 | Msa1340460 | 0.830246 | 3.272484e-55 | -8.615850e-47 |
| Msa1297050 | Msa1340460 | 0.829458 | 5.090797e-55 | -8.615850e-47 |
| Msa1340460 | Msa1346840 | -0.829518 | 4.921459e-55 | -8.615850e-47 |
| Msa1340460 | Msa1401990 | -0.830618 | 2.653823e-55 | -8.615850e-47 |
| Msa1340460 | Msa1463900 | -0.807389 | 5.177049e-50 | -8.615850e-47 |
| Msa1340460 | Msa1465610 | 0.815036 | 1.135700e-51 | -8.615850e-47 |
| Msa0389610 | Msa1340460 | 0.824013 | 1.016046e-53 | -8.615850e-47 |
| Msa0417380 | Msa1340460 | 0.905049 | 6.471218e-80 | -8.615850e-47 |
| Msa1006910 | Msa1340460 | 0.805363 | 1.383986e-49 | -8.615850e-47 |
| Msa1043250 | Msa1340460 | 0.803775 | 2.967722e-49 | -8.615850e-47 |
| Msa1048070 | Msa1340460 | 0.847516 | 1.100771e-59 | -8.615850e-47 |
| Msa1058170 | Msa1340460 | -0.803325 | 3.679547e-49 | -8.615850e-47 |
| Msa1080330 | Msa1340460 | 0.808918 | 2.445681e-50 | -8.615850e-47 |
| Msa1090860 | Msa1340460 | 0.826215 | 3.066050e-54 | -8.615850e-47 |
| Msa0277010 | Msa1340460 | 0.804400 | 2.199608e-49 | -8.615850e-47 |
| Msa0318680 | Msa1340460 | -0.833657 | 4.700957e-56 | -8.615850e-47 |
| Msa1114590 | Msa1340460 | -0.801186 | 1.014195e-48 | -8.615850e-47 |
| Msa1156150 | Msa1340460 | 0.808688 | 2.738715e-50 | -8.615850e-47 |
| Msa1191050 | Msa1340460 | 0.847699 | 9.801497e-60 | -8.615850e-47 |
| Msa0528610 | Msa1340460 | 0.849432 | 3.245676e-60 | -8.615850e-47 |
| Msa0589260 | Msa1340460 | 0.810534 | 1.098658e-50 | -8.615850e-47 |
| Msa0878220 | Msa1340460 | -0.805366 | 1.381873e-49 | -8.615850e-47 |
| Msa0946280 | Msa1340460 | 0.854117 | 1.524073e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340460 | MtrunA17_Chr3g0114831 | 79.899 | 398 | 10 | 5 | 1 | 328 | 410 | 807 | 0.0 | 617 |
| Msa1340460 | MtrunA17_Chr3g0114831 | 80.068 | 296 | 28 | 5 | 18 | 290 | 41 | 328 | 9.03e-156 | 456 |
| Msa1340460 | MtrunA17_Chr3g0114811 | 76.923 | 351 | 41 | 4 | 17 | 327 | 93 | 443 | 0.0 | 549 |
| Msa1340460 | MtrunA17_Chr1g0195061 | 35.342 | 365 | 180 | 8 | 17 | 328 | 34 | 395 | 3.02e-57 | 190 |
| Msa1340460 | MtrunA17_Chr7g0267911 | 26.471 | 374 | 211 | 10 | 18 | 334 | 105 | 471 | 4.19e-35 | 133 |
| Msa1340460 | MtrunA17_Chr8g0382671 | 27.248 | 367 | 203 | 10 | 18 | 327 | 107 | 466 | 1.96e-33 | 128 |
| Msa1340460 | MtrunA17_Chr2g0324801 | 23.913 | 368 | 203 | 16 | 20 | 324 | 22 | 375 | 7.13e-14 | 72.0 |
| Msa1340460 | MtrunA17_Chr8g0360241 | 26.667 | 210 | 129 | 8 | 19 | 207 | 56 | 261 | 1.24e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1340460 | AT1G77670.1 | 69.602 | 352 | 67 | 4 | 17 | 328 | 86 | 437 | 0.0 | 511 |
| Msa1340460 | AT2G22250.1 | 26.703 | 367 | 205 | 12 | 18 | 327 | 60 | 419 | 4.15e-34 | 130 |
| Msa1340460 | AT2G22250.3 | 26.703 | 367 | 205 | 12 | 18 | 327 | 107 | 466 | 7.03e-34 | 130 |
| Msa1340460 | AT2G22250.2 | 26.703 | 367 | 205 | 12 | 18 | 327 | 107 | 466 | 7.03e-34 | 130 |
| Msa1340460 | AT5G36160.1 | 24.885 | 217 | 140 | 8 | 19 | 213 | 55 | 270 | 8.19e-15 | 75.5 |
| Msa1340460 | AT4G28410.1 | 22.715 | 361 | 218 | 14 | 19 | 324 | 81 | 435 | 4.53e-14 | 73.2 |
| Msa1340460 | AT2G24850.1 | 21.753 | 308 | 181 | 11 | 72 | 324 | 115 | 417 | 1.94e-13 | 71.2 |
| Msa1340460 | AT4G28410.2 | 25.238 | 210 | 135 | 7 | 19 | 207 | 81 | 289 | 1.20e-12 | 68.9 |
| Msa1340460 | AT4G23590.1 | 22.946 | 353 | 207 | 12 | 29 | 324 | 58 | 402 | 2.48e-12 | 67.8 |
| Msa1340460 | AT5G53970.1 | 23.504 | 234 | 153 | 8 | 1 | 209 | 24 | 256 | 1.05e-11 | 65.9 |
| Msa1340460 | AT4G28420.2 | 20.718 | 362 | 222 | 14 | 19 | 323 | 73 | 426 | 2.55e-11 | 64.7 |
| Msa1340460 | AT2G20610.1 | 20.765 | 366 | 219 | 14 | 19 | 324 | 79 | 433 | 3.65e-11 | 64.3 |
Find 238 sgRNAs with CRISPR-Local
Find 525 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTACCTACATTTCAATTTC+TGG | 0.052999 | tig0004148:-79149 | None:intergenic |
| ATTTCATTGAATTCCGTTTA+AGG | 0.133463 | tig0004148:+79320 | Msa1340460:three_prime_UTR |
| GCAGCTTCCTTTACAAATTC+TGG | 0.166218 | tig0004148:-74523 | None:intergenic |
| GTAACAGTAATTTCCTTATC+AGG | 0.190896 | tig0004148:-74658 | None:intergenic |
| ACTAGATTCTTCCCCTCTTC+TGG | 0.194253 | tig0004148:-75462 | None:intergenic |
| TATCGCAAAGAGAGCTATTT+TGG | 0.198899 | tig0004148:+75272 | Msa1340460:CDS |
| AGCAATGAGAGATGGGAATT+TGG | 0.202883 | tig0004148:-76873 | None:intergenic |
| AGGTCACACGGCCCCGTTTC+TGG | 0.204668 | tig0004148:-76683 | None:intergenic |
| TATGGCAAAGAGAGCTATTT+TGG | 0.213807 | tig0004148:+78806 | Msa1340460:three_prime_UTR |
| ACTAGATTCTTTCCTTCTTC+TGG | 0.222870 | tig0004148:-78996 | None:intergenic |
| CTTGCAGATCACACCCCTTT+TGG | 0.237315 | tig0004148:+75354 | Msa1340460:CDS |
| AATCAGTATGCAAGGGGTTT+TGG | 0.252107 | tig0004148:+74571 | Msa1340460:CDS |
| GCAATGAGAGATGGGAATTT+GGG | 0.255815 | tig0004148:-76872 | None:intergenic |
| GCTTCATAAGAATCATAAAA+AGG | 0.262851 | tig0004148:-78291 | None:intergenic |
| AGCCATCACAACTGAGATTC+AGG | 0.276927 | tig0004148:-79252 | None:intergenic |
| TTCAAGTAAAATACACTTAA+AGG | 0.276934 | tig0004148:-75438 | None:intergenic |
| CAGGGCTTTCCCAACTTTGA+TGG | 0.277986 | tig0004148:+74499 | Msa1340460:intron |
| GAAAGGTTTAAGAAAGATAC+TGG | 0.287130 | tig0004148:+78156 | Msa1340460:three_prime_UTR |
| TTGCATTGAGAATGATGTTC+TGG | 0.306322 | tig0004148:+74963 | Msa1340460:CDS |
| AAGCTGCAATTCAAGCTATC+AGG | 0.308373 | tig0004148:+74539 | Msa1340460:CDS |
| GCAATTGCTGCAACTGTGTT+AGG | 0.312345 | tig0004148:+78231 | Msa1340460:three_prime_UTR |
| GCAAGGATGAAGGAACTCTT+AGG | 0.314890 | tig0004148:+79033 | Msa1340460:three_prime_UTR |
| AAGTCTGGACCATCAAAATT+TGG | 0.315231 | tig0004148:-78042 | None:intergenic |
| TGATAAGTTGGCATTTGATA+TGG | 0.319352 | tig0004148:+78539 | Msa1340460:three_prime_UTR |
| GCACCATAAGAATCATAAAA+AGG | 0.324575 | tig0004148:-74757 | None:intergenic |
| AATCAGTATGCTAGGGGTTA+TGG | 0.333698 | tig0004148:+78105 | Msa1340460:three_prime_UTR |
| TGACAATATCACTCCTTTGC+AGG | 0.339654 | tig0004148:+76925 | Msa1340460:three_prime_UTR |
| CCCGTCCCTGATTGCTTGAA+TGG | 0.339775 | tig0004148:-78079 | None:intergenic |
| GGGAAGTCATTCTCCTTAAC+GGG | 0.341836 | tig0004148:+75090 | Msa1340460:CDS |
| ATTAATAGCACCATGTTTGA+TGG | 0.343864 | tig0004148:-78004 | None:intergenic |
| TCCTTGACTGGATGGAAAAT+CGG | 0.347205 | tig0004148:+78636 | Msa1340460:three_prime_UTR |
| GAAAATACATCATCCTTTGC+AGG | 0.348131 | tig0004148:+72492 | Msa1340460:CDS |
| GCTGCTTCCTTTACAAAGTC+TGG | 0.355176 | tig0004148:-78057 | None:intergenic |
| TGATGGCAAGCATACTCATT+TGG | 0.355864 | tig0004148:-77987 | None:intergenic |
| ATGGCTGGTGCAAAAGTAAA+AGG | 0.357091 | tig0004148:+78324 | Msa1340460:three_prime_UTR |
| TTTCTTAAACCTTTCAGAAA+TGG | 0.358048 | tig0004148:-78148 | None:intergenic |
| TCATAAGTTGGCATTCGATA+TGG | 0.360612 | tig0004148:+75005 | Msa1340460:intron |
| ACGGTGACAATGAACTCATT+AGG | 0.363636 | tig0004148:+78603 | Msa1340460:three_prime_UTR |
| ACGGTGACAATGAACTCATT+AGG | 0.367287 | tig0004148:+75069 | Msa1340460:CDS |
| TGAACTAAAGAGGGACTATA+TGG | 0.367867 | tig0004148:+78788 | Msa1340460:three_prime_UTR |
| GTTGTAGATCACACCCCTTT+TGG | 0.368199 | tig0004148:+78888 | Msa1340460:three_prime_UTR |
| CAAGGACGAGGAAACTATTA+AGG | 0.370324 | tig0004148:+75500 | Msa1340460:CDS |
| GATGGCAAGCATACTCATTT+GGG | 0.373899 | tig0004148:-77986 | None:intergenic |
| ACCGTCCGCTCGAACATTCC+TGG | 0.379988 | tig0004148:-78585 | None:intergenic |
| TCAATCGGGACAGCGAAATC+TGG | 0.381339 | tig0004148:-74829 | None:intergenic |
| GAGAGATTCAAGAAAGATAC+TGG | 0.383980 | tig0004148:+74622 | Msa1340460:CDS |
| CGGTCCTTCCTACCAGAAAC+GGG | 0.387858 | tig0004148:+76671 | Msa1340460:three_prime_UTR |
| ACCGTCCTCTCGAACATTCC+AGG | 0.392162 | tig0004148:-75051 | None:intergenic |
| TCCCAAATTCGTGTGAAAAC+TGG | 0.397703 | tig0004148:+79384 | Msa1340460:three_prime_UTR |
| GTCGACTTCAACTCATCAAT+CGG | 0.398128 | tig0004148:-74844 | None:intergenic |
| TGGTGCTATTAATCTTGGTC+AGG | 0.399769 | tig0004148:+78014 | Msa1340460:three_prime_UTR |
| ATTTCAATTGCTACTTTGCC+TGG | 0.404821 | tig0004148:+75033 | Msa1340460:CDS |
| ATTGAAGGCCGTTGGCTTCA+AGG | 0.407137 | tig0004148:+78836 | Msa1340460:three_prime_UTR |
| GAAAACGAAGATTGGAGCTC+TGG | 0.415518 | tig0004148:-72431 | None:intergenic |
| AAGCAGCCATTCAAGCAATC+AGG | 0.417683 | tig0004148:+78073 | Msa1340460:three_prime_UTR |
| AGCTCCACATAGTAAGAATC+TGG | 0.422650 | tig0004148:-75237 | None:intergenic |
| AAACATGGTGCTATTAATCT+TGG | 0.428947 | tig0004148:+78009 | Msa1340460:three_prime_UTR |
| AAGTCAGAAAGGAATCAAAT+TGG | 0.429177 | tig0004148:+76718 | Msa1340460:three_prime_UTR |
| AAGGAAATTACTGTTACATC+TGG | 0.429368 | tig0004148:+74664 | Msa1340460:CDS |
| ATTTCAATTGCTTCTTTGCC+AGG | 0.432311 | tig0004148:+78567 | Msa1340460:three_prime_UTR |
| CGGTGACAATGAACTCATTA+GGG | 0.433243 | tig0004148:+75070 | Msa1340460:CDS |
| CGGTGACAATGAACTCATTA+GGG | 0.433243 | tig0004148:+78604 | Msa1340460:three_prime_UTR |
| TCGGTCCTTCCTACCAGAAA+CGG | 0.434477 | tig0004148:+76670 | Msa1340460:three_prime_UTR |
| GATTTGAGGTTGCAAAAGTA+AGG | 0.436033 | tig0004148:-78713 | None:intergenic |
| GTGAGGGGTATTTAAAAGAA+TGG | 0.436908 | tig0004148:-78421 | None:intergenic |
| ATTGAAATGAATAGTAGAAA+AGG | 0.440172 | tig0004148:-76819 | None:intergenic |
| TTCAATGAATAATAGTTTGA+AGG | 0.440260 | tig0004148:+79283 | Msa1340460:three_prime_UTR |
| AGGGAAGTCATTCTCCTTAA+CGG | 0.443160 | tig0004148:+75089 | Msa1340460:CDS |
| GTGAGGGGTATTTATAAGAA+TGG | 0.445966 | tig0004148:-74887 | None:intergenic |
| AGTTCAGTGTAATAACAATC+TGG | 0.446351 | tig0004148:-78771 | None:intergenic |
| GCAATGACAATGTTGAGATC+TGG | 0.447498 | tig0004148:-74598 | None:intergenic |
| TCCAACCTTCCACCCCGTTA+AGG | 0.449140 | tig0004148:-75103 | None:intergenic |
| GGGAAGACATTCTCCTTGAC+TGG | 0.450453 | tig0004148:+78624 | Msa1340460:three_prime_UTR |
| CACAGACTTCAACTCTTCAA+TGG | 0.452484 | tig0004148:-78379 | None:intergenic |
| AAGGAAATTACTGTTACGTC+TGG | 0.453509 | tig0004148:+78198 | Msa1340460:three_prime_UTR |
| TCCTTAACGGGGTGGAAGGT+TGG | 0.453825 | tig0004148:+75102 | Msa1340460:CDS |
| ATGAAAATACAAGCCTTAAA+CGG | 0.455451 | tig0004148:-79333 | None:intergenic |
| AGCCCACTGCATAGGATTTG+AGG | 0.459195 | tig0004148:-78727 | None:intergenic |
| GAGGAGAGAATGTGTGCAGC+AGG | 0.461446 | tig0004148:-76768 | None:intergenic |
| TTATGGTGCCACTTTATCCA+TGG | 0.461803 | tig0004148:+74771 | Msa1340460:CDS |
| GAAATGGCAATGTTGAGGTC+TGG | 0.465178 | tig0004148:-78132 | None:intergenic |
| AATACCCCTCACAATCCTAC+TGG | 0.467702 | tig0004148:+74898 | Msa1340460:CDS |
| AATACCCCTCACAATCCTAC+TGG | 0.467702 | tig0004148:+78432 | Msa1340460:three_prime_UTR |
| TGACTGGATGGAAAATCGGC+TGG | 0.469672 | tig0004148:+78640 | Msa1340460:three_prime_UTR |
| TTTACTTTCTGCAAGGATGA+AGG | 0.471593 | tig0004148:+79023 | Msa1340460:three_prime_UTR |
| CTTAACATGGGGAGTGCGAC+AGG | 0.474775 | tig0004148:+78680 | Msa1340460:three_prime_UTR |
| AAATTCTGGACCATCAAAGT+TGG | 0.480265 | tig0004148:-74509 | None:intergenic |
| TTGAAATGAATAGTAGAAAA+GGG | 0.480865 | tig0004148:-76818 | None:intergenic |
| CTTACTATGTGGAGCTAAAG+AGG | 0.481335 | tig0004148:+75244 | Msa1340460:CDS |
| GTTATTACACTGAACTAAAG+AGG | 0.481692 | tig0004148:+78778 | Msa1340460:three_prime_UTR |
| TGCACCAGCCATGGATAAAG+TGG | 0.482819 | tig0004148:-78313 | None:intergenic |
| TCAATGAATAATAGTTTGAA+GGG | 0.487850 | tig0004148:+79284 | Msa1340460:three_prime_UTR |
| TTTATCTTTGGTGGAGCTTG+AGG | 0.487968 | tig0004148:+76605 | Msa1340460:CDS |
| TCAATGGGTAGAGCAAAATC+TGG | 0.488716 | tig0004148:-78363 | None:intergenic |
| GTCTAGTGGAACCTACTTTG+TGG | 0.491445 | tig0004148:+78866 | Msa1340460:three_prime_UTR |
| GGTGCCACTTTATCCATGGC+TGG | 0.493054 | tig0004148:+74775 | Msa1340460:CDS |
| AAGGGTAACGATTTATAAGA+AGG | 0.493919 | tig0004148:-76800 | None:intergenic |
| TAACGGGGTGGAAGGTTGGA+TGG | 0.495813 | tig0004148:+75106 | Msa1340460:CDS |
| CCCCTGAATCTCAGTTGTGA+TGG | 0.499017 | tig0004148:+79250 | Msa1340460:three_prime_UTR |
| TACTGTTACGTCTGGTTGCA+CGG | 0.500814 | tig0004148:+78206 | Msa1340460:three_prime_UTR |
| GTTGAAGGATTGAAGGCCGT+TGG | 0.502592 | tig0004148:+78828 | Msa1340460:three_prime_UTR |
| GCCTGGAATGTTCGAGAGGA+CGG | 0.502694 | tig0004148:+75050 | Msa1340460:CDS |
| AATTCTGGACCATCAAAGTT+GGG | 0.503111 | tig0004148:-74508 | None:intergenic |
| ACAGACTTCAACTCTTCAAT+GGG | 0.503426 | tig0004148:-78378 | None:intergenic |
| AAGAGGGGAAGAATCTAGTC+AGG | 0.503919 | tig0004148:+75466 | Msa1340460:CDS |
| GTAGAGTCGAAAACGAAGAT+TGG | 0.504366 | tig0004148:-72439 | None:intergenic |
| GCCAGGAATGTTCGAGCGGA+CGG | 0.505338 | tig0004148:+78584 | Msa1340460:three_prime_UTR |
| CCAGAAATTGAAATGTAGGT+AGG | 0.505772 | tig0004148:+79149 | Msa1340460:three_prime_UTR |
| TGATGAAGTGTATGATAAGT+TGG | 0.507962 | tig0004148:+78527 | Msa1340460:three_prime_UTR |
| AACAGCAGTGGACATGGTGG+CGG | 0.511768 | tig0004148:-76897 | None:intergenic |
| TTATGAAGCCACTTTATCCA+TGG | 0.512377 | tig0004148:+78305 | Msa1340460:three_prime_UTR |
| ACGGGAATAATCAGTATGCT+AGG | 0.513864 | tig0004148:+78097 | Msa1340460:three_prime_UTR |
| CATTAAGTGTGGAGGCGCTA+TGG | 0.515779 | tig0004148:-75130 | None:intergenic |
| CAAAGTAGGTTCCACTAGAC+GGG | 0.518051 | tig0004148:-78863 | None:intergenic |
| AGCACCAGATTCTTACTATG+TGG | 0.518355 | tig0004148:+75233 | Msa1340460:CDS |
| GAAGCCACTTTATCCATGGC+TGG | 0.518436 | tig0004148:+78309 | Msa1340460:three_prime_UTR |
| CGAATATCTAGTTAAGGAGG+TGG | 0.518440 | tig0004148:+78935 | Msa1340460:three_prime_UTR |
| CGCACCAGCCATGGATAAAG+TGG | 0.520207 | tig0004148:-74779 | None:intergenic |
| TGTTAAGTGTGGAGGTGCTA+TGG | 0.525056 | tig0004148:-78664 | None:intergenic |
| TAGCACCTCCACACTTAACA+TGG | 0.526143 | tig0004148:+78667 | Msa1340460:three_prime_UTR |
| TAACAGTAATTTCCTTATCA+GGG | 0.528262 | tig0004148:-74657 | None:intergenic |
| ATCTTTCCAGTAGGATTGTG+AGG | 0.528488 | tig0004148:-74904 | None:intergenic |
| ATCTTTCCAGTAGGATTGTG+AGG | 0.528488 | tig0004148:-78438 | None:intergenic |
| AGACATTCTCCTTGACTGGA+TGG | 0.528851 | tig0004148:+78628 | Msa1340460:three_prime_UTR |
| GACTGGATGGAAAATCGGCT+GGG | 0.530502 | tig0004148:+78641 | Msa1340460:three_prime_UTR |
| ACTAATTGTAGACCCTGATA+AGG | 0.530936 | tig0004148:+74645 | Msa1340460:CDS |
| GGAGAGAATGTGTGCAGCAG+GGG | 0.532845 | tig0004148:-76766 | None:intergenic |
| GCCATTCAAGCAATCAGGGA+CGG | 0.533299 | tig0004148:+78078 | Msa1340460:three_prime_UTR |
| CTATTAAGGCTGCTGTTGAA+AGG | 0.533649 | tig0004148:+75514 | Msa1340460:CDS |
| CATCCTTGCAGAAAGTAAAA+CGG | 0.534086 | tig0004148:-79019 | None:intergenic |
| CGCGAAGCATTAAGTCAGAA+AGG | 0.535158 | tig0004148:+76707 | Msa1340460:three_prime_UTR |
| GTTTACTTTCTGCAAGGACG+AGG | 0.538788 | tig0004148:+75488 | Msa1340460:CDS |
| CCATTCAAGCAATCAGGGAC+GGG | 0.541030 | tig0004148:+78079 | Msa1340460:three_prime_UTR |
| GGTGCTATTAATCTTGGTCA+GGG | 0.541754 | tig0004148:+78015 | Msa1340460:three_prime_UTR |
| GCCATCACAACTGAGATTCA+GGG | 0.544523 | tig0004148:-79251 | None:intergenic |
| TAGCGCCTCCACACTTAATG+TGG | 0.544673 | tig0004148:+75133 | Msa1340460:CDS |
| GGCACGAGTATTCTTTGAGA+TGG | 0.546134 | tig0004148:-74866 | None:intergenic |
| TTCAAGGTATTCCCGTCCAA+TGG | 0.546743 | tig0004148:+75318 | Msa1340460:intron |
| TATTATGTTTCACTCTCCGT+CGG | 0.549348 | tig0004148:+76651 | Msa1340460:three_prime_UTR |
| CAAGGATGAAGGAACTCTTA+GGG | 0.549677 | tig0004148:+79034 | Msa1340460:three_prime_UTR |
| GTGGCGGCAGCAATGAGAGA+TGG | 0.550089 | tig0004148:-76881 | None:intergenic |
| CTCAATGCAAAGAGAAGCGA+TGG | 0.550862 | tig0004148:-78484 | None:intergenic |
| GCAATTCAAGCTATCAGGGA+TGG | 0.556773 | tig0004148:+74544 | Msa1340460:CDS |
| GCTAGTTGTAGACCCTGAAA+AGG | 0.557242 | tig0004148:+78179 | Msa1340460:three_prime_UTR |
| ATTCTCCTTAACGGGGTGGA+AGG | 0.557345 | tig0004148:+75098 | Msa1340460:CDS |
| CTCTTAGGGCCGCTGTTGAG+AGG | 0.560698 | tig0004148:+79048 | Msa1340460:three_prime_UTR |
| CGGGAATAATCAGTATGCTA+GGG | 0.561122 | tig0004148:+78098 | Msa1340460:three_prime_UTR |
| AAAACGAAGATTGGAGCTCT+GGG | 0.561211 | tig0004148:-72430 | None:intergenic |
| AACGGGGTGGAAGGTTGGAT+GGG | 0.562198 | tig0004148:+75107 | Msa1340460:CDS |
| TGGCGGCAGCAATGAGAGAT+GGG | 0.562805 | tig0004148:-76880 | None:intergenic |
| TGATGGTCCAGAATTTGTAA+AGG | 0.563207 | tig0004148:+74516 | Msa1340460:CDS |
| CAATGAGAGATGGGAATTTG+GGG | 0.563563 | tig0004148:-76871 | None:intergenic |
| CGGCCCCGTTTCTGGTAGGA+AGG | 0.564151 | tig0004148:-76675 | None:intergenic |
| AGCTGCAATTCAAGCTATCA+GGG | 0.564260 | tig0004148:+74540 | Msa1340460:CDS |
| AAAAGAGGATGAACCTGCAA+AGG | 0.565053 | tig0004148:-72505 | None:intergenic |
| GGCTGCTGTTGAAAGGATGA+AGG | 0.567990 | tig0004148:+75521 | Msa1340460:CDS |
| TTATTACACTGAACTAAAGA+GGG | 0.568098 | tig0004148:+78779 | Msa1340460:three_prime_UTR |
| ACTGCAGCAGCCCACTGCAT+AGG | 0.569164 | tig0004148:-78735 | None:intergenic |
| ACAAAGTAGGTTCCACTAGA+CGG | 0.569906 | tig0004148:-78864 | None:intergenic |
| GTGTTAGGATTGATAAATCC+CGG | 0.569928 | tig0004148:+78246 | Msa1340460:three_prime_UTR |
| TGATGGTCCAGACTTTGTAA+AGG | 0.572265 | tig0004148:+78050 | Msa1340460:three_prime_UTR |
| TCAACATTGCCATTTCTGAA+AGG | 0.572406 | tig0004148:+78139 | Msa1340460:three_prime_UTR |
| TAAATAGGATGAACCTGCAA+AGG | 0.572640 | tig0004148:-76938 | None:intergenic |
| AAACACGATAACCTCATCAC+CGG | 0.572871 | tig0004148:-78265 | None:intergenic |
| AGCAGCCATTCAAGCAATCA+GGG | 0.573003 | tig0004148:+78074 | Msa1340460:three_prime_UTR |
| ATGGGAATAATCAGTATGCA+AGG | 0.573797 | tig0004148:+74563 | Msa1340460:CDS |
| CAATTCAAGCTATCAGGGAT+GGG | 0.575114 | tig0004148:+74545 | Msa1340460:CDS |
| CGCACTCCCCATGTTAAGTG+TGG | 0.576137 | tig0004148:-78675 | None:intergenic |
| CGAGTGAACATCTTTCCAGT+AGG | 0.577547 | tig0004148:-74913 | None:intergenic |
| CGAGTGAACATCTTTCCAGT+AGG | 0.577547 | tig0004148:-78447 | None:intergenic |
| AGTCAGGTTTACTTTCTGCA+AGG | 0.577645 | tig0004148:+75482 | Msa1340460:CDS |
| AGTTAAGGAGGTGGGAGTAG+TGG | 0.579382 | tig0004148:+78944 | Msa1340460:three_prime_UTR |
| TCGACTTCAACTCATCAATC+GGG | 0.583078 | tig0004148:-74843 | None:intergenic |
| GTGATCTACAACCACAAAGT+AGG | 0.583391 | tig0004148:-78877 | None:intergenic |
| AGCGCCTCCACACTTAATGT+GGG | 0.584458 | tig0004148:+75134 | Msa1340460:CDS |
| ATCGGGACAGCGAAATCTGG+AGG | 0.584516 | tig0004148:-74826 | None:intergenic |
| AGGAGAGAATGTGTGCAGCA+GGG | 0.589039 | tig0004148:-76767 | None:intergenic |
| ATGAGAGATGGGAATTTGGG+GGG | 0.590901 | tig0004148:-76869 | None:intergenic |
| TATAAGAAGGAATGAATCTG+AGG | 0.591102 | tig0004148:-76787 | None:intergenic |
| TTCAAGGTATTCCCGTCTAG+TGG | 0.593396 | tig0004148:+78852 | Msa1340460:three_prime_UTR |
| TCTTTCCAGTAGGATTGTGA+GGG | 0.595542 | tig0004148:-74903 | None:intergenic |
| TCTTTCCAGTAGGATTGTGA+GGG | 0.595542 | tig0004148:-78437 | None:intergenic |
| TTTCAGAAATGGCAATGTTG+AGG | 0.596285 | tig0004148:-78137 | None:intergenic |
| CGCACTCCCCACATTAAGTG+TGG | 0.602087 | tig0004148:-75141 | None:intergenic |
| TTACTATGTGGAGCTAAAGA+GGG | 0.603840 | tig0004148:+75245 | Msa1340460:CDS |
| AGCACCTCCACACTTAACAT+GGG | 0.605376 | tig0004148:+78668 | Msa1340460:three_prime_UTR |
| AACCTCAAATCCTATGCAGT+GGG | 0.606106 | tig0004148:+78725 | Msa1340460:three_prime_UTR |
| AATTAAGGAGGTCGGTGTGG+TGG | 0.607174 | tig0004148:+75410 | Msa1340460:CDS |
| TTGCGAATATCTAGTTAAGG+AGG | 0.612658 | tig0004148:+78932 | Msa1340460:three_prime_UTR |
| TTCAAGTAAAACACACTGGT+AGG | 0.614437 | tig0004148:-78972 | None:intergenic |
| CAAAGGAGTGATATTGTCAG+TGG | 0.615527 | tig0004148:-76921 | None:intergenic |
| ACTCCCCATGTTAAGTGTGG+AGG | 0.616008 | tig0004148:-78672 | None:intergenic |
| CAATGAATAATAGTTTGAAG+GGG | 0.616083 | tig0004148:+79285 | Msa1340460:three_prime_UTR |
| TTGTGAATATCTAATTAAGG+AGG | 0.616139 | tig0004148:+75398 | Msa1340460:CDS |
| GGCCGCTGTTGAGAGGATGA+AGG | 0.616475 | tig0004148:+79055 | Msa1340460:three_prime_UTR |
| CAACCTCAAATCCTATGCAG+TGG | 0.616824 | tig0004148:+78724 | Msa1340460:three_prime_UTR |
| ATTGATAAATCCCGGTGATG+AGG | 0.617618 | tig0004148:+78254 | Msa1340460:three_prime_UTR |
| CGGGAATACCTTGAAGCCAA+CGG | 0.620217 | tig0004148:-78844 | None:intergenic |
| TGGAAAGATGTTCACTCGAG+AGG | 0.626679 | tig0004148:+74918 | Msa1340460:CDS |
| TGGAAAGATGTTCACTCGAG+AGG | 0.626679 | tig0004148:+78452 | Msa1340460:three_prime_UTR |
| AATGCTTCGCGAAGGTCACA+CGG | 0.631960 | tig0004148:-76695 | None:intergenic |
| AACACGATAACCTCATCACC+GGG | 0.634794 | tig0004148:-78264 | None:intergenic |
| TGGGAATAATCAGTATGCAA+GGG | 0.635598 | tig0004148:+74564 | Msa1340460:CDS |
| AGTGGAAACAGCAGTGGACA+TGG | 0.636832 | tig0004148:-76903 | None:intergenic |
| CTTTGCCTGGAATGTTCGAG+AGG | 0.637690 | tig0004148:+75046 | Msa1340460:CDS |
| ACTCCCCACATTAAGTGTGG+AGG | 0.638165 | tig0004148:-75138 | None:intergenic |
| GGGAATAATCAGTATGCAAG+GGG | 0.638567 | tig0004148:+74565 | Msa1340460:CDS |
| ATTGTCAGTGGAAACAGCAG+TGG | 0.639763 | tig0004148:-76909 | None:intergenic |
| TCGGGACAGCGAAATCTGGA+GGG | 0.640395 | tig0004148:-74825 | None:intergenic |
| CTTTGCCAGGAATGTTCGAG+CGG | 0.643712 | tig0004148:+78580 | Msa1340460:three_prime_UTR |
| ATGGGTAGAGCAAAATCTGG+AGG | 0.644262 | tig0004148:-78360 | None:intergenic |
| CCATCACAACTGAGATTCAG+GGG | 0.644925 | tig0004148:-79250 | None:intergenic |
| GGGAATAATCAGTATGCTAG+GGG | 0.645649 | tig0004148:+78099 | Msa1340460:three_prime_UTR |
| TTTACTTGAATCCAGAAGAG+GGG | 0.646076 | tig0004148:+75451 | Msa1340460:CDS |
| AGTATGCTTGCCATCAAACA+TGG | 0.649600 | tig0004148:+77994 | Msa1340460:three_prime_UTR |
| TCTAATTAAGGAGGTCGGTG+TGG | 0.658342 | tig0004148:+75407 | Msa1340460:CDS |
| TTCAATCAACATATAGCACA+CGG | 0.659301 | tig0004148:-79113 | None:intergenic |
| TGGATTCAAGTAAAACACAC+TGG | 0.663871 | tig0004148:-78976 | None:intergenic |
| AATGAGAGATGGGAATTTGG+GGG | 0.665738 | tig0004148:-76870 | None:intergenic |
| AGTCATTCTCCTTAACGGGG+TGG | 0.665949 | tig0004148:+75094 | Msa1340460:CDS |
| TGGGTAGAGCAAAATCTGGA+GGG | 0.667591 | tig0004148:-78359 | None:intergenic |
| AAAGGTTTAAGAAAGATACT+GGG | 0.669115 | tig0004148:+78157 | Msa1340460:three_prime_UTR |
| CACACGGCCCCGTTTCTGGT+AGG | 0.671507 | tig0004148:-76679 | None:intergenic |
| GCGCCTCCACACTTAATGTG+GGG | 0.671863 | tig0004148:+75135 | Msa1340460:CDS |
| TCTGACTTAATGCTTCGCGA+AGG | 0.672744 | tig0004148:-76703 | None:intergenic |
| GCACCTCCACACTTAACATG+GGG | 0.680545 | tig0004148:+78669 | Msa1340460:three_prime_UTR |
| GAATATCTAGTTAAGGAGGT+GGG | 0.681051 | tig0004148:+78936 | Msa1340460:three_prime_UTR |
| CTCCTTCATCCTCTCAACAG+CGG | 0.683424 | tig0004148:-79057 | None:intergenic |
| CTTTCCAGTAGGATTGTGAG+GGG | 0.686125 | tig0004148:-74902 | None:intergenic |
| CTTTCCAGTAGGATTGTGAG+GGG | 0.686125 | tig0004148:-78436 | None:intergenic |
| GAATATCTAATTAAGGAGGT+CGG | 0.694506 | tig0004148:+75402 | Msa1340460:CDS |
| GGAAGTCATTCTCCTTAACG+GGG | 0.699032 | tig0004148:+75091 | Msa1340460:CDS |
| TTTCTGGTAGGAAGGACCGA+CGG | 0.714216 | tig0004148:-76667 | None:intergenic |
| CATCACAACTGAGATTCAGG+GGG | 0.722640 | tig0004148:-79249 | None:intergenic |
| GGTCCTTCCTACCAGAAACG+GGG | 0.723494 | tig0004148:+76672 | Msa1340460:three_prime_UTR |
| GGAAACAGCAGTGGACATGG+TGG | 0.727016 | tig0004148:-76900 | None:intergenic |
| TTGTTTGTTAGGTTGCAAAG+CGG | 0.733177 | tig0004148:+77935 | Msa1340460:intron |
| GGGTTTATAGGAGAATGAGG+AGG | 0.748780 | tig0004148:-76849 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAAAAAAAAAAC+AGG | - | tig0004148:74202-74221 | None:intergenic | 10.0% |
| !!! | CTGTTTTTTTTTTTTTTTTT+TGG | + | tig0004148:74200-74219 | Msa1340460:intron | 10.0% |
| !! | TAATTGAAAATAAAATTGAA+GGG | + | tig0004148:76063-76082 | Msa1340460:intron | 10.0% |
| !! | TACAAGAAAAAAAAAAAATA+AGG | - | tig0004148:77470-77489 | None:intergenic | 10.0% |
| !!! | ATATTTTCATTTTTAGCTTT+GGG | + | tig0004148:72670-72689 | Msa1340460:intron | 15.0% |
| !!! | TTTTTTTTTTTTATGAGACT+TGG | + | tig0004148:73242-73261 | Msa1340460:intron | 15.0% |
| !!! | ATTTTGTGAATATCTAATTA+AGG | + | tig0004148:75395-75414 | Msa1340460:CDS | 15.0% |
| !! | GTAATTGAAAATAAAATTGA+AGG | + | tig0004148:76062-76081 | Msa1340460:intron | 15.0% |
| !!! | AATAACATGTATTTTATTCA+GGG | - | tig0004148:76211-76230 | None:intergenic | 15.0% |
| !!! | AAATAACATGTATTTTATTC+AGG | - | tig0004148:76212-76231 | None:intergenic | 15.0% |
| !!! | TTATTTTAATCAATGATAAC+AGG | - | tig0004148:77853-77872 | None:intergenic | 15.0% |
| !! | AAATTATAAACATAAACACA+TGG | - | tig0004148:77901-77920 | None:intergenic | 15.0% |
| !!! | CATATTTTCATTTTTAGCTT+TGG | + | tig0004148:72669-72688 | Msa1340460:intron | 20.0% |
| !!! | TATTTTCATTTTTAGCTTTG+GGG | + | tig0004148:72671-72690 | Msa1340460:intron | 20.0% |
| !! | AACAAATATCTTATGAGAAA+AGG | + | tig0004148:73207-73226 | Msa1340460:intron | 20.0% |
| !! | TATTTAAAAATGACCTCTTA+TGG | - | tig0004148:73461-73480 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAACAGGTACTA+AGG | - | tig0004148:74194-74213 | None:intergenic | 20.0% |
| !! | TTCAAGTAAAATACACTTAA+AGG | - | tig0004148:75441-75460 | None:intergenic | 20.0% |
| !! | TCTTAGTGTAGTAATATATA+AGG | - | tig0004148:75902-75921 | None:intergenic | 20.0% |
| !! | TCAATTACAAATAGTCTATT+TGG | - | tig0004148:76145-76164 | None:intergenic | 20.0% |
| !! | ACATGAATAATTGGAAAATT+TGG | - | tig0004148:76318-76337 | None:intergenic | 20.0% |
| !!! | ATTACTTTCACAATTTTGTT+TGG | + | tig0004148:76568-76587 | Msa1340460:intron | 20.0% |
| !!! | ATTTTAGACGATTTTATCTT+TGG | + | tig0004148:76593-76612 | Msa1340460:intron | 20.0% |
| !! | TTGAAATGAATAGTAGAAAA+GGG | - | tig0004148:76821-76840 | None:intergenic | 20.0% |
| !! | ATTGAAATGAATAGTAGAAA+AGG | - | tig0004148:76822-76841 | None:intergenic | 20.0% |
| !!! | ATTTTCCATTAATTCATTTC+TGG | + | tig0004148:76971-76990 | Msa1340460:intron | 20.0% |
| !!! | TTTTCCATTAATTCATTTCT+GGG | + | tig0004148:76972-76991 | Msa1340460:intron | 20.0% |
| !! | TTGAGAATATTCATATTTAC+TGG | + | tig0004148:77069-77088 | Msa1340460:intron | 20.0% |
| !! | AAAATACAAAACCCTAATTT+AGG | + | tig0004148:77163-77182 | Msa1340460:intron | 20.0% |
| !! | AAATACAAAACCCTAATTTA+GGG | + | tig0004148:77164-77183 | Msa1340460:intron | 20.0% |
| !! | GTTAACATCAAATATATGTT+CGG | + | tig0004148:77194-77213 | Msa1340460:intron | 20.0% |
| !! | CATTGAATAATTGATGTATT+TGG | - | tig0004148:77611-77630 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAGTCAATTTTT+AGG | - | tig0004148:77636-77655 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTAACCAAAT+AGG | + | tig0004148:77691-77710 | Msa1340460:intron | 20.0% |
| !!! | TTAAGTTGTTTAACCAAATA+GGG | + | tig0004148:77692-77711 | Msa1340460:intron | 20.0% |
| !!! | TTTTTTTTTGGAAGGAAATT+TGG | + | tig0004148:77815-77834 | Msa1340460:intron | 20.0% |
| !! | AATAAGTGAAGAAAAAGATA+AGG | + | tig0004148:77868-77887 | Msa1340460:intron | 20.0% |
| !!! | TTTGCTTTAATTTGTTTGTT+AGG | + | tig0004148:77924-77943 | Msa1340460:intron | 20.0% |
| !! | TTCATAAGAATCATAAAAAG+GGG | - | tig0004148:78292-78311 | None:intergenic | 20.0% |
| !! | CTTCATAAGAATCATAAAAA+GGG | - | tig0004148:78293-78312 | None:intergenic | 20.0% |
| !! | TTCAATGAATAATAGTTTGA+AGG | + | tig0004148:79283-79302 | Msa1340460:three_prime_UTR | 20.0% |
| !! | TCAATGAATAATAGTTTGAA+GGG | + | tig0004148:79284-79303 | Msa1340460:three_prime_UTR | 20.0% |
| ! | TGTAAAAGAAACAGTTACAT+AGG | - | tig0004148:72651-72670 | None:intergenic | 25.0% |
| !!! | ATTTTCATTTTTAGCTTTGG+GGG | + | tig0004148:72672-72691 | Msa1340460:intron | 25.0% |
| ! | AATGAAAGCAAATAAACAGT+AGG | - | tig0004148:72714-72733 | None:intergenic | 25.0% |
| !!! | GCAAATGTTTTTTTATGCTT+CGG | + | tig0004148:73322-73341 | Msa1340460:intron | 25.0% |
| ! | GAAATGAAAGTAAAGAGTAA+AGG | + | tig0004148:73362-73381 | Msa1340460:intron | 25.0% |
| ! | TGATTTGACAATTAATCTGT+TGG | - | tig0004148:73617-73636 | None:intergenic | 25.0% |
| ! | TAAACAATTACTATGTGTTC+TGG | - | tig0004148:73867-73886 | None:intergenic | 25.0% |
| ! | TAACAGTAATTTCCTTATCA+GGG | - | tig0004148:74660-74679 | None:intergenic | 25.0% |
| ! | GTATTAGGATTAATAAATCC+CGG | + | tig0004148:74712-74731 | Msa1340460:intron | 25.0% |
| ! | TTGTGAATATCTAATTAAGG+AGG | + | tig0004148:75398-75417 | Msa1340460:CDS | 25.0% |
| !!! | ACTTTCTTTTTTCAAGTTAC+TGG | + | tig0004148:75950-75969 | Msa1340460:intron | 25.0% |
| ! | ACAGAAATACAAGTTACAAT+GGG | - | tig0004148:76044-76063 | None:intergenic | 25.0% |
| ! | TACAGAAATACAAGTTACAA+TGG | - | tig0004148:76045-76064 | None:intergenic | 25.0% |
| !! | GTATTTTATTCAGGGTATAT+GGG | - | tig0004148:76203-76222 | None:intergenic | 25.0% |
| !! | TGTATTTTATTCAGGGTATA+TGG | - | tig0004148:76204-76223 | None:intergenic | 25.0% |
| ! | AAGCTCTTAACATGAATAAT+TGG | - | tig0004148:76327-76346 | None:intergenic | 25.0% |
| ! | AAAAATACATGCTAATACGT+TGG | + | tig0004148:76378-76397 | Msa1340460:intron | 25.0% |
| ! | TTTCCATTAATTCATTTCTG+GGG | + | tig0004148:76973-76992 | Msa1340460:intron | 25.0% |
| ! | ATTCATATTTACTGGTAGAA+AGG | + | tig0004148:77077-77096 | Msa1340460:intron | 25.0% |
| ! | TTCATATTTACTGGTAGAAA+GGG | + | tig0004148:77078-77097 | Msa1340460:intron | 25.0% |
| ! | AACAAATAGACCCTAAATTA+GGG | - | tig0004148:77177-77196 | None:intergenic | 25.0% |
| ! | TAACAAATAGACCCTAAATT+AGG | - | tig0004148:77178-77197 | None:intergenic | 25.0% |
| ! | TAAACAAAATCATTGTGCAT+TGG | + | tig0004148:77244-77263 | Msa1340460:intron | 25.0% |
| ! | AAACAAAATCATTGTGCATT+GGG | + | tig0004148:77245-77264 | Msa1340460:intron | 25.0% |
| ! | AAGTTATTCCATAGAGTTTA+AGG | - | tig0004148:77411-77430 | None:intergenic | 25.0% |
| ! | TTATGAACTATAATAGTGAC+CGG | + | tig0004148:77653-77672 | Msa1340460:intron | 25.0% |
| ! | TAGCATCATCATATAAACTT+AGG | - | tig0004148:77718-77737 | None:intergenic | 25.0% |
| ! | TTTCTTAAACCTTTCAGAAA+TGG | - | tig0004148:78151-78170 | None:intergenic | 25.0% |
| ! | AAAGGTTTAAGAAAGATACT+GGG | + | tig0004148:78157-78176 | Msa1340460:three_prime_UTR | 25.0% |
| !! | TAACAGTAATTTCCTTTTCA+GGG | - | tig0004148:78194-78213 | None:intergenic | 25.0% |
| ! | GCTTCATAAGAATCATAAAA+AGG | - | tig0004148:78294-78313 | None:intergenic | 25.0% |
| ! | TTATTACACTGAACTAAAGA+GGG | + | tig0004148:78779-78798 | Msa1340460:three_prime_UTR | 25.0% |
| !! | TATCATTTTCATGTCCAAAA+GGG | - | tig0004148:78905-78924 | None:intergenic | 25.0% |
| !! | ATATCATTTTCATGTCCAAA+AGG | - | tig0004148:78906-78925 | None:intergenic | 25.0% |
| !! | ATTTTGCGAATATCTAGTTA+AGG | + | tig0004148:78929-78948 | Msa1340460:three_prime_UTR | 25.0% |
| !! | TTTTCCAGAAATTGAAATGT+AGG | + | tig0004148:79145-79164 | Msa1340460:three_prime_UTR | 25.0% |
| ! | CAATGAATAATAGTTTGAAG+GGG | + | tig0004148:79285-79304 | Msa1340460:three_prime_UTR | 25.0% |
| ! | ATTTCATTGAATTCCGTTTA+AGG | + | tig0004148:79320-79339 | Msa1340460:three_prime_UTR | 25.0% |
| ! | ATGAAAATACAAGCCTTAAA+CGG | - | tig0004148:79336-79355 | None:intergenic | 25.0% |
| ! | TCCTTTCACCTTATACTTTT+CGG | + | tig0004148:72532-72551 | Msa1340460:intron | 30.0% |
| ATAAACAGTAGGTCAAATTG+AGG | - | tig0004148:72703-72722 | None:intergenic | 30.0% | |
| ! | AATTGGTTTAGTACGAAACT+TGG | + | tig0004148:72878-72897 | Msa1340460:intron | 30.0% |
| !! | TGAGTTTGATTTGAGATTCT+TGG | - | tig0004148:73083-73102 | None:intergenic | 30.0% |
| !!! | AATGTTTTTTTATGCTTCGG+TGG | + | tig0004148:73325-73344 | Msa1340460:intron | 30.0% |
| AGTTAAACTTTCTACTTCCT+AGG | + | tig0004148:73404-73423 | Msa1340460:intron | 30.0% | |
| !!! | TTCCTAGGTTTTTTAAGAAG+AGG | + | tig0004148:73419-73438 | Msa1340460:intron | 30.0% |
| TTCCTCTTCTTAAAAAACCT+AGG | - | tig0004148:73424-73443 | None:intergenic | 30.0% | |
| AGTTGAACTTGAGTTATAGA+TGG | - | tig0004148:73533-73552 | None:intergenic | 30.0% | |
| GACAATTAATCTGTTGGATT+TGG | - | tig0004148:73611-73630 | None:intergenic | 30.0% | |
| ATTTCGAACTAAATTCGAGT+TGG | + | tig0004148:73638-73657 | Msa1340460:intron | 30.0% | |
| ATTACTGTTCATATTTCCTC+TGG | + | tig0004148:73986-74005 | Msa1340460:intron | 30.0% | |
| ! | CATCGACATTGGTAATAATA+TGG | - | tig0004148:74131-74150 | None:intergenic | 30.0% |
| !! | TTTTTGGTAGATAGACGAAA+TGG | + | tig0004148:74216-74235 | Msa1340460:intron | 30.0% |
| TTGTGTGTGTGAGTTTATAA+TGG | - | tig0004148:74247-74266 | None:intergenic | 30.0% | |
| AAACAAATGACAAGCAACAA+AGG | - | tig0004148:74387-74406 | None:intergenic | 30.0% | |
| ! | TTGCTTGTCATTTGTTTGTT+AGG | + | tig0004148:74390-74409 | Msa1340460:intron | 30.0% |
| ! | TTGTTTGTTAGGTTGCAAAA+CGG | + | tig0004148:74401-74420 | Msa1340460:intron | 30.0% |
| GTAACAGTAATTTCCTTATC+AGG | - | tig0004148:74661-74680 | None:intergenic | 30.0% | |
| AAGGAAATTACTGTTACATC+TGG | + | tig0004148:74664-74683 | Msa1340460:CDS | 30.0% | |
| ! | GCTCCTTTTTATGATTCTTA+TGG | + | tig0004148:74754-74773 | Msa1340460:CDS | 30.0% |
| GCACCATAAGAATCATAAAA+AGG | - | tig0004148:74760-74779 | None:intergenic | 30.0% | |
| TGATGAAGTGTATCATAAGT+TGG | + | tig0004148:74993-75012 | Msa1340460:intron | 30.0% | |
| !!! | TATTTTGGTTGAAGGATTGA+AGG | + | tig0004148:75287-75306 | Msa1340460:CDS | 30.0% |
| ! | ATCATTTTCATGTCCAAAAG+GGG | - | tig0004148:75370-75389 | None:intergenic | 30.0% |
| ! | CATCATTTTCATGTCCAAAA+GGG | - | tig0004148:75371-75390 | None:intergenic | 30.0% |
| ! | ACATCATTTTCATGTCCAAA+AGG | - | tig0004148:75372-75391 | None:intergenic | 30.0% |
| GAATATCTAATTAAGGAGGT+CGG | + | tig0004148:75402-75421 | Msa1340460:CDS | 30.0% | |
| ! | ATTTTACTTGAATCCAGAAG+AGG | + | tig0004148:75449-75468 | Msa1340460:CDS | 30.0% |
| ! | TTTTACTTGAATCCAGAAGA+GGG | + | tig0004148:75450-75469 | Msa1340460:CDS | 30.0% |
| ATTACACGAATCAAACCTTT+GGG | - | tig0004148:75626-75645 | None:intergenic | 30.0% | |
| AATTACACGAATCAAACCTT+TGG | - | tig0004148:75627-75646 | None:intergenic | 30.0% | |
| ATACAACAAAGTGATAAGAG+AGG | - | tig0004148:75788-75807 | None:intergenic | 30.0% | |
| CTATATTGACATAGTAATGC+TGG | - | tig0004148:75848-75867 | None:intergenic | 30.0% | |
| !!! | TATATGGGTCGTTTTGATTT+AGG | - | tig0004148:76188-76207 | None:intergenic | 30.0% |
| GTTCTTATCAACTGAAATAC+GGG | - | tig0004148:76264-76283 | None:intergenic | 30.0% | |
| CGTTCTTATCAACTGAAATA+CGG | - | tig0004148:76265-76284 | None:intergenic | 30.0% | |
| !! | CGTATTTCAGTTGATAAGAA+CGG | + | tig0004148:76263-76282 | Msa1340460:intron | 30.0% |
| GGTGCAATATGTAAAGATTA+AGG | + | tig0004148:76284-76303 | Msa1340460:intron | 30.0% | |
| TAGGTACATATTAGCATTTG+TGG | - | tig0004148:76459-76478 | None:intergenic | 30.0% | |
| ACAAATGCTAATATGTACCT+AGG | + | tig0004148:76458-76477 | Msa1340460:intron | 30.0% | |
| AGTTCAATAACATGTTTCCT+AGG | - | tig0004148:76478-76497 | None:intergenic | 30.0% | |
| ! | TTAGACGATTTTATCTTTGG+TGG | + | tig0004148:76596-76615 | Msa1340460:intron | 30.0% |
| AAGTCAGAAAGGAATCAAAT+TGG | + | tig0004148:76718-76737 | Msa1340460:three_prime_UTR | 30.0% | |
| TATAAGAAGGAATGAATCTG+AGG | - | tig0004148:76790-76809 | None:intergenic | 30.0% | |
| AAGGGTAACGATTTATAAGA+AGG | - | tig0004148:76803-76822 | None:intergenic | 30.0% | |
| ! | TTCCATTAATTCATTTCTGG+GGG | + | tig0004148:76974-76993 | Msa1340460:intron | 30.0% |
| CAAATATATGTTCGGATTGA+TGG | + | tig0004148:77202-77221 | Msa1340460:intron | 30.0% | |
| !! | ATTGATGGTGGGTATTTATT+TGG | + | tig0004148:77217-77236 | Msa1340460:intron | 30.0% |
| CAATATGTGTTTCAGAATCT+TGG | - | tig0004148:77286-77305 | None:intergenic | 30.0% | |
| GCTTATTTCCTTAAACTCTA+TGG | + | tig0004148:77400-77419 | Msa1340460:intron | 30.0% | |
| CATTGAATAATTGATGTACC+TGG | + | tig0004148:77573-77592 | Msa1340460:intron | 30.0% | |
| ATTTGGCTATATTATAGACC+AGG | - | tig0004148:77594-77613 | None:intergenic | 30.0% | |
| ATATAAACTTAGGCCCTATT+TGG | - | tig0004148:77708-77727 | None:intergenic | 30.0% | |
| ATTAATAGCACCATGTTTGA+TGG | - | tig0004148:78007-78026 | None:intergenic | 30.0% | |
| !! | AAACATGGTGCTATTAATCT+TGG | + | tig0004148:78009-78028 | Msa1340460:three_prime_UTR | 30.0% |
| GAAAGGTTTAAGAAAGATAC+TGG | + | tig0004148:78156-78175 | Msa1340460:three_prime_UTR | 30.0% | |
| ! | GTAACAGTAATTTCCTTTTC+AGG | - | tig0004148:78195-78214 | None:intergenic | 30.0% |
| TGATGAAGTGTATGATAAGT+TGG | + | tig0004148:78527-78546 | Msa1340460:three_prime_UTR | 30.0% | |
| ! | TGATAAGTTGGCATTTGATA+TGG | + | tig0004148:78539-78558 | Msa1340460:three_prime_UTR | 30.0% |
| AGTTCAGTGTAATAACAATC+TGG | - | tig0004148:78774-78793 | None:intergenic | 30.0% | |
| GTTATTACACTGAACTAAAG+AGG | + | tig0004148:78778-78797 | Msa1340460:three_prime_UTR | 30.0% | |
| !!! | TATTTTGGTTGAAGGATTGA+AGG | + | tig0004148:75287-75306 | Msa1340460:CDS | 30.0% |
| ! | ATCATTTTCATGTCCAAAAG+GGG | - | tig0004148:75370-75389 | None:intergenic | 30.0% |
| ! | TTTTACTTGAATCCAGAAGA+AGG | + | tig0004148:75450-75469 | Msa1340460:CDS | 30.0% |
| TTCAATCAACATATAGCACA+CGG | - | tig0004148:79116-79135 | None:intergenic | 30.0% | |
| ! | ATGATGTATTTTCTCAGAGG+TGG | - | tig0004148:72485-72504 | None:intergenic | 35.0% |
| ! | AGGATGATGTATTTTCTCAG+AGG | - | tig0004148:72488-72507 | None:intergenic | 35.0% |
| GAAAATACATCATCCTTTGC+AGG | + | tig0004148:72492-72511 | Msa1340460:CDS | 35.0% | |
| AGGTGAAAGGAATTGAAAAG+AGG | - | tig0004148:72523-72542 | None:intergenic | 35.0% | |
| ! | CCTTTCACCTTATACTTTTC+GGG | + | tig0004148:72533-72552 | Msa1340460:intron | 35.0% |
| ! | AAATGGACCCGAAAAGTATA+AGG | - | tig0004148:72543-72562 | None:intergenic | 35.0% |
| CACTCTTTATAATTGCGTTG+TGG | + | tig0004148:72753-72772 | Msa1340460:intron | 35.0% | |
| AATTGCGTTGTGGTAAATGA+TGG | + | tig0004148:72763-72782 | Msa1340460:intron | 35.0% | |
| TGGTAAATGATGGTTTCTGT+AGG | + | tig0004148:72773-72792 | Msa1340460:intron | 35.0% | |
| ! | CGACTCGACTTGATAATAAT+TGG | + | tig0004148:72861-72880 | Msa1340460:intron | 35.0% |
| ! | TTTAAAGTTCGCGAACTGTT+TGG | + | tig0004148:72945-72964 | Msa1340460:intron | 35.0% |
| TTGAGATTCTTGGATTCCAA+TGG | - | tig0004148:73073-73092 | None:intergenic | 35.0% | |
| AAAACATTTGCTCTCCTTTG+AGG | - | tig0004148:73313-73332 | None:intergenic | 35.0% | |
| ! | TTCGGTGGAGAATTTGAAAT+TGG | + | tig0004148:73340-73359 | Msa1340460:intron | 35.0% |
| GTAAAGAGTAAAGGCAATGA+AGG | + | tig0004148:73371-73390 | Msa1340460:intron | 35.0% | |
| TGAAACGTTTAAGCCATAAG+AGG | + | tig0004148:73445-73464 | Msa1340460:intron | 35.0% | |
| TAGCTCAAGTTTGACTCATT+AGG | + | tig0004148:73577-73596 | Msa1340460:intron | 35.0% | |
| !! | GAACTAAATTCGAGTTGGTT+CGG | + | tig0004148:73643-73662 | Msa1340460:intron | 35.0% |
| AACAACGTCTCATCAATGTT+GGG | + | tig0004148:73706-73725 | Msa1340460:intron | 35.0% | |
| ! | AATTACTATGTGTTCTGGAC+TGG | - | tig0004148:73862-73881 | None:intergenic | 35.0% |
| TGTTCATATTTCCTCTGGTT+TGG | + | tig0004148:73991-74010 | Msa1340460:intron | 35.0% | |
| TATTACCAATGTCGATGTGT+TGG | + | tig0004148:74134-74153 | Msa1340460:intron | 35.0% | |
| TATAAACTCACACACACAAG+TGG | + | tig0004148:74248-74267 | Msa1340460:intron | 35.0% | |
| AAATGCCGAAATTGTTAGGT+TGG | - | tig0004148:74306-74325 | None:intergenic | 35.0% | |
| GTTAGATAAGATAGCTCAAC+TGG | - | tig0004148:74331-74350 | None:intergenic | 35.0% | |
| CAAAGGTCAAAGTAAACACA+TGG | - | tig0004148:74370-74389 | None:intergenic | 35.0% | |
| AATTCTGGACCATCAAAGTT+GGG | - | tig0004148:74511-74530 | None:intergenic | 35.0% | |
| AAATTCTGGACCATCAAAGT+TGG | - | tig0004148:74512-74531 | None:intergenic | 35.0% | |
| TGATGGTCCAGAATTTGTAA+AGG | + | tig0004148:74516-74535 | Msa1340460:CDS | 35.0% | |
| ATGGGAATAATCAGTATGCA+AGG | + | tig0004148:74563-74582 | Msa1340460:CDS | 35.0% | |
| TGGGAATAATCAGTATGCAA+GGG | + | tig0004148:74564-74583 | Msa1340460:CDS | 35.0% | |
| GAGAGATTCAAGAAAGATAC+TGG | + | tig0004148:74622-74641 | Msa1340460:CDS | 35.0% | |
| ACTAATTGTAGACCCTGATA+AGG | + | tig0004148:74645-74664 | Msa1340460:CDS | 35.0% | |
| ATTAATAAATCCCGGTGATG+AGG | + | tig0004148:74720-74739 | Msa1340460:intron | 35.0% | |
| AAACAGAATAACCTCATCAC+CGG | - | tig0004148:74734-74753 | None:intergenic | 35.0% | |
| !! | GTGAGGGGTATTTATAAGAA+TGG | - | tig0004148:74890-74909 | None:intergenic | 35.0% |
| TTGCATTGAGAATGATGTTC+TGG | + | tig0004148:74963-74982 | Msa1340460:CDS | 35.0% | |
| ! | TCATAAGTTGGCATTCGATA+TGG | + | tig0004148:75005-75024 | Msa1340460:intron | 35.0% |
| !! | ATTTCAATTGCTACTTTGCC+TGG | + | tig0004148:75033-75052 | Msa1340460:CDS | 35.0% |
| TTACTATGTGGAGCTAAAGA+GGG | + | tig0004148:75245-75264 | Msa1340460:CDS | 35.0% | |
| ! | TATCGCAAAGAGAGCTATTT+TGG | + | tig0004148:75272-75291 | Msa1340460:CDS | 35.0% |
| !!! | AAGAGAGCTATTTTGGTTGA+AGG | + | tig0004148:75279-75298 | Msa1340460:CDS | 35.0% |
| ACAAAAAAGGTTCCATTGGA+CGG | - | tig0004148:75333-75352 | None:intergenic | 35.0% | |
| AAGCACAAAAAAGGTTCCAT+TGG | - | tig0004148:75337-75356 | None:intergenic | 35.0% | |
| TTTACTTGAATCCAGAAGAG+GGG | + | tig0004148:75451-75470 | Msa1340460:CDS | 35.0% | |
| ! | TTTCCTTTCTAGTATCCCAA+AGG | + | tig0004148:75608-75627 | Msa1340460:intron | 35.0% |
| !! | AAACCTTTGGGATACTAGAA+AGG | - | tig0004148:75614-75633 | None:intergenic | 35.0% |
| ATCAAAACATCGACATTCAG+GGG | - | tig0004148:75664-75683 | None:intergenic | 35.0% | |
| CATCAAAACATCGACATTCA+GGG | - | tig0004148:75665-75684 | None:intergenic | 35.0% | |
| !!! | CTGAATGTCGATGTTTTGAT+GGG | + | tig0004148:75664-75683 | Msa1340460:intron | 35.0% |
| TATATAAGGCCTTCTAATGC+AGG | - | tig0004148:75888-75907 | None:intergenic | 35.0% | |
| ! | ATCCATGATCATGTTTCTGT+TGG | + | tig0004148:75986-76005 | Msa1340460:intron | 35.0% |
| ATCCAACAGAAACATGATCA+TGG | - | tig0004148:75991-76010 | None:intergenic | 35.0% | |
| TATTATGTTTCACTCTCCGT+CGG | + | tig0004148:76651-76670 | Msa1340460:three_prime_UTR | 35.0% | |
| TAAATAGGATGAACCTGCAA+AGG | - | tig0004148:76941-76960 | None:intergenic | 35.0% | |
| AACCCCCAGAAATGAATTAA+TGG | - | tig0004148:76979-76998 | None:intergenic | 35.0% | |
| TAGAAAGGGTTTGTGGAAAA+GGG | + | tig0004148:77092-77111 | Msa1340460:intron | 35.0% | |
| GAAGGAAAGGAATGAGAAAA+GGG | + | tig0004148:77114-77133 | Msa1340460:intron | 35.0% | |
| AAGGAAAGGAATGAGAAAAG+GGG | + | tig0004148:77115-77134 | Msa1340460:intron | 35.0% | |
| AGAAAAGGGGATAGATTTCT+AGG | + | tig0004148:77128-77147 | Msa1340460:intron | 35.0% | |
| ATATATGTTCGGATTGATGG+TGG | + | tig0004148:77205-77224 | Msa1340460:intron | 35.0% | |
| ! | TATATGTTCGGATTGATGGT+GGG | + | tig0004148:77206-77225 | Msa1340460:intron | 35.0% |
| TAATTAAGTGCTTACTCCTC+CGG | - | tig0004148:77675-77694 | None:intergenic | 35.0% | |
| ACCAGAGATAATATATCGTC+TGG | + | tig0004148:77777-77796 | Msa1340460:intron | 35.0% | |
| ACCAGACGATATATTATCTC+TGG | - | tig0004148:77781-77800 | None:intergenic | 35.0% | |
| !!! | AAGCAGGAGGGTTTTTTTTT+TGG | + | tig0004148:77803-77822 | Msa1340460:intron | 35.0% |
| !!! | AGGAGGGTTTTTTTTTTGGA+AGG | + | tig0004148:77807-77826 | Msa1340460:intron | 35.0% |
| ! | TTGTTTGTTAGGTTGCAAAG+CGG | + | tig0004148:77935-77954 | Msa1340460:intron | 35.0% |
| ! | CAGGGTTTTCCAAATTTTGA+TGG | + | tig0004148:78033-78052 | Msa1340460:three_prime_UTR | 35.0% |
| AAGTCTGGACCATCAAAATT+TGG | - | tig0004148:78045-78064 | None:intergenic | 35.0% | |
| TTTCAGAAATGGCAATGTTG+AGG | - | tig0004148:78140-78159 | None:intergenic | 35.0% | |
| ! | TCAACATTGCCATTTCTGAA+AGG | + | tig0004148:78139-78158 | Msa1340460:three_prime_UTR | 35.0% |
| AAGGAAATTACTGTTACGTC+TGG | + | tig0004148:78198-78217 | Msa1340460:three_prime_UTR | 35.0% | |
| GTGTTAGGATTGATAAATCC+CGG | + | tig0004148:78246-78265 | Msa1340460:three_prime_UTR | 35.0% | |
| ! | TTATGAAGCCACTTTATCCA+TGG | + | tig0004148:78305-78324 | Msa1340460:three_prime_UTR | 35.0% |
| ACAGACTTCAACTCTTCAAT+GGG | - | tig0004148:78381-78400 | None:intergenic | 35.0% | |
| !! | GTGAGGGGTATTTAAAAGAA+TGG | - | tig0004148:78424-78443 | None:intergenic | 35.0% |
| ATTTCAATTGCTTCTTTGCC+AGG | + | tig0004148:78567-78586 | Msa1340460:three_prime_UTR | 35.0% | |
| ! | GATTTGAGGTTGCAAAAGTA+AGG | - | tig0004148:78716-78735 | None:intergenic | 35.0% |
| TGAACTAAAGAGGGACTATA+TGG | + | tig0004148:78788-78807 | Msa1340460:three_prime_UTR | 35.0% | |
| ! | TATGGCAAAGAGAGCTATTT+TGG | + | tig0004148:78806-78825 | Msa1340460:three_prime_UTR | 35.0% |
| !!! | AAGAGAGCTATTTTGGTTGA+AGG | + | tig0004148:75279-75298 | Msa1340460:CDS | 35.0% |
| TTGCGAATATCTAGTTAAGG+AGG | + | tig0004148:78932-78951 | Msa1340460:three_prime_UTR | 35.0% | |
| GAATATCTAGTTAAGGAGGT+GGG | + | tig0004148:78936-78955 | Msa1340460:three_prime_UTR | 35.0% | |
| TTCAAGTAAAACACACTGGT+AGG | - | tig0004148:78975-78994 | None:intergenic | 35.0% | |
| TGGATTCAAGTAAAACACAC+TGG | - | tig0004148:78979-78998 | None:intergenic | 35.0% | |
| ACTAGATTCTTTCCTTCTTC+TGG | - | tig0004148:78999-79018 | None:intergenic | 35.0% | |
| CATCCTTGCAGAAAGTAAAA+CGG | - | tig0004148:79022-79041 | None:intergenic | 35.0% | |
| TTTACTTTCTGCAAGGATGA+AGG | + | tig0004148:79023-79042 | Msa1340460:three_prime_UTR | 35.0% | |
| CCTACCTACATTTCAATTTC+TGG | - | tig0004148:79152-79171 | None:intergenic | 35.0% | |
| CCAGAAATTGAAATGTAGGT+AGG | + | tig0004148:79149-79168 | Msa1340460:three_prime_UTR | 35.0% | |
| ! | ACCAGTTTTCACACGAATTT+GGG | - | tig0004148:79388-79407 | None:intergenic | 35.0% |
| AAAACGAAGATTGGAGCTCT+GGG | - | tig0004148:72433-72452 | None:intergenic | 40.0% | |
| GTAGAGTCGAAAACGAAGAT+TGG | - | tig0004148:72442-72461 | None:intergenic | 40.0% | |
| ! | CTCAGAGGTGGTTTCATTTT+CGG | - | tig0004148:72473-72492 | None:intergenic | 40.0% |
| AAAAGAGGATGAACCTGCAA+AGG | - | tig0004148:72508-72527 | None:intergenic | 40.0% | |
| ! | CCCGAAAAGTATAAGGTGAA+AGG | - | tig0004148:72536-72555 | None:intergenic | 40.0% |
| GATAGCATAGCAGCAGTAAA+TGG | - | tig0004148:72560-72579 | None:intergenic | 40.0% | |
| !!! | CTCTTTTTTCAGCTCGAGTT+CGG | + | tig0004148:72918-72937 | Msa1340460:intron | 40.0% |
| ! | TCCAATGGTAGTGTAGCATA+GGG | - | tig0004148:73058-73077 | None:intergenic | 40.0% |
| ! | TTCCAATGGTAGTGTAGCAT+AGG | - | tig0004148:73059-73078 | None:intergenic | 40.0% |
| CGAATACCATCATACCTCAA+AGG | + | tig0004148:73296-73315 | Msa1340460:intron | 40.0% | |
| ! | TATAGATGGTTCGACTCGTT+TGG | - | tig0004148:73519-73538 | None:intergenic | 40.0% |
| TGATGAGACGTTGTTCGTAA+CGG | - | tig0004148:73701-73720 | None:intergenic | 40.0% | |
| GAACAACGTCTCATCAATGT+TGG | + | tig0004148:73705-73724 | Msa1340460:intron | 40.0% | |
| AAGGAAGAATTCCGCTGAAT+TGG | + | tig0004148:73796-73815 | Msa1340460:intron | 40.0% | |
| AGGAAGAATTCCGCTGAATT+GGG | + | tig0004148:73797-73816 | Msa1340460:intron | 40.0% | |
| CTTGAGATGATGAGAGACTT+GGG | + | tig0004148:73836-73855 | Msa1340460:intron | 40.0% | |
| GTCTGAACTTCATCATGTGT+CGG | + | tig0004148:74049-74068 | Msa1340460:intron | 40.0% | |
| ! | TGTTGGTGTCTGTGCTTTAT+GGG | + | tig0004148:74151-74170 | Msa1340460:intron | 40.0% |
| GGCAAAATGCCGAAATTGTT+AGG | - | tig0004148:74310-74329 | None:intergenic | 40.0% | |
| GATGGCAAGCATACTCATTT+GGG | - | tig0004148:74455-74474 | None:intergenic | 40.0% | |
| TGATGGCAAGCATACTCATT+TGG | - | tig0004148:74456-74475 | None:intergenic | 40.0% | |
| GTTTATAGCTCCATGTGTGA+TGG | - | tig0004148:74473-74492 | None:intergenic | 40.0% | |
| ACACATGGAGCTATAAACCT+TGG | + | tig0004148:74475-74494 | Msa1340460:intron | 40.0% | |
| GCAGCTTCCTTTACAAATTC+TGG | - | tig0004148:74526-74545 | None:intergenic | 40.0% | |
| AAGCTGCAATTCAAGCTATC+AGG | + | tig0004148:74539-74558 | Msa1340460:CDS | 40.0% | |
| AGCTGCAATTCAAGCTATCA+GGG | + | tig0004148:74540-74559 | Msa1340460:CDS | 40.0% | |
| CAATTCAAGCTATCAGGGAT+GGG | + | tig0004148:74545-74564 | Msa1340460:CDS | 40.0% | |
| GGGAATAATCAGTATGCAAG+GGG | + | tig0004148:74565-74584 | Msa1340460:CDS | 40.0% | |
| ! | AATCAGTATGCAAGGGGTTT+TGG | + | tig0004148:74571-74590 | Msa1340460:CDS | 40.0% |
| GCAATGACAATGTTGAGATC+TGG | - | tig0004148:74601-74620 | None:intergenic | 40.0% | |
| AACAGAATAACCTCATCACC+GGG | - | tig0004148:74733-74752 | None:intergenic | 40.0% | |
| !! | TTATGGTGCCACTTTATCCA+TGG | + | tig0004148:74771-74790 | Msa1340460:CDS | 40.0% |
| ! | TTTTATATTCGCACCAGCCA+TGG | - | tig0004148:74791-74810 | None:intergenic | 40.0% |
| TCGACTTCAACTCATCAATC+GGG | - | tig0004148:74846-74865 | None:intergenic | 40.0% | |
| ! | GTCGACTTCAACTCATCAAT+CGG | - | tig0004148:74847-74866 | None:intergenic | 40.0% |
| TCTTTCCAGTAGGATTGTGA+GGG | - | tig0004148:74906-74925 | None:intergenic | 40.0% | |
| ATCTTTCCAGTAGGATTGTG+AGG | - | tig0004148:74907-74926 | None:intergenic | 40.0% | |
| ACGGTGACAATGAACTCATT+AGG | + | tig0004148:75069-75088 | Msa1340460:CDS | 40.0% | |
| CGGTGACAATGAACTCATTA+GGG | + | tig0004148:75070-75089 | Msa1340460:CDS | 40.0% | |
| AGGGAAGTCATTCTCCTTAA+CGG | + | tig0004148:75089-75108 | Msa1340460:CDS | 40.0% | |
| AGCACCAGATTCTTACTATG+TGG | + | tig0004148:75233-75252 | Msa1340460:CDS | 40.0% | |
| AGCTCCACATAGTAAGAATC+TGG | - | tig0004148:75240-75259 | None:intergenic | 40.0% | |
| CTTACTATGTGGAGCTAAAG+AGG | + | tig0004148:75244-75263 | Msa1340460:CDS | 40.0% | |
| TTGAAGGATTGAAGGCTGTT+GGG | + | tig0004148:75295-75314 | Msa1340460:intron | 40.0% | |
| CAAAAAAGGTTCCATTGGAC+GGG | - | tig0004148:75332-75351 | None:intergenic | 40.0% | |
| GTGATCTGCAAGCACAAAAA+AGG | - | tig0004148:75346-75365 | None:intergenic | 40.0% | |
| AGTCAGGTTTACTTTCTGCA+AGG | + | tig0004148:75482-75501 | Msa1340460:CDS | 40.0% | |
| CAAGGACGAGGAAACTATTA+AGG | + | tig0004148:75500-75519 | Msa1340460:CDS | 40.0% | |
| CTATTAAGGCTGCTGTTGAA+AGG | + | tig0004148:75514-75533 | Msa1340460:CDS | 40.0% | |
| CCATCAAAACATCGACATTC+AGG | - | tig0004148:75666-75685 | None:intergenic | 40.0% | |
| !! | CCTGAATGTCGATGTTTTGA+TGG | + | tig0004148:75663-75682 | Msa1340460:intron | 40.0% |
| !!! | ATGTTTTGATGGGTATGTGC+TGG | + | tig0004148:75674-75693 | Msa1340460:intron | 40.0% |
| ATACTCCATCCTGCATTAGA+AGG | + | tig0004148:75876-75895 | Msa1340460:intron | 40.0% | |
| TTTATCTTTGGTGGAGCTTG+AGG | + | tig0004148:76605-76624 | Msa1340460:CDS | 40.0% | |
| AATGAGAGATGGGAATTTGG+GGG | - | tig0004148:76873-76892 | None:intergenic | 40.0% | |
| CAATGAGAGATGGGAATTTG+GGG | - | tig0004148:76874-76893 | None:intergenic | 40.0% | |
| GCAATGAGAGATGGGAATTT+GGG | - | tig0004148:76875-76894 | None:intergenic | 40.0% | |
| AGCAATGAGAGATGGGAATT+TGG | - | tig0004148:76876-76895 | None:intergenic | 40.0% | |
| CAAAGGAGTGATATTGTCAG+TGG | - | tig0004148:76924-76943 | None:intergenic | 40.0% | |
| TGACAATATCACTCCTTTGC+AGG | + | tig0004148:76925-76944 | Msa1340460:three_prime_UTR | 40.0% | |
| TTACTGGTAGAAAGGGTTTG+TGG | + | tig0004148:77085-77104 | Msa1340460:intron | 40.0% | |
| GTAGAAAGGGTTTGTGGAAA+AGG | + | tig0004148:77091-77110 | Msa1340460:intron | 40.0% | |
| TTTGTGGAAAAGGGAAGGAA+AGG | + | tig0004148:77101-77120 | Msa1340460:intron | 40.0% | |
| GGAAGGAAAGGAATGAGAAA+AGG | + | tig0004148:77113-77132 | Msa1340460:intron | 40.0% | |
| TGAACTATAATAGTGACCGG+AGG | + | tig0004148:77656-77675 | Msa1340460:intron | 40.0% | |
| ATATATCGTCTGGTAGAAGC+AGG | + | tig0004148:77787-77806 | Msa1340460:intron | 40.0% | |
| GATGGCAAGCATACTCATTT+GGG | - | tig0004148:74455-74474 | None:intergenic | 40.0% | |
| TGATGGCAAGCATACTCATT+TGG | - | tig0004148:74456-74475 | None:intergenic | 40.0% | |
| AGTATGCTTGCCATCAAACA+TGG | + | tig0004148:77994-78013 | Msa1340460:three_prime_UTR | 40.0% | |
| !! | TGGTGCTATTAATCTTGGTC+AGG | + | tig0004148:78014-78033 | Msa1340460:three_prime_UTR | 40.0% |
| !! | GGTGCTATTAATCTTGGTCA+GGG | + | tig0004148:78015-78034 | Msa1340460:three_prime_UTR | 40.0% |
| TGATGGTCCAGACTTTGTAA+AGG | + | tig0004148:78050-78069 | Msa1340460:three_prime_UTR | 40.0% | |
| ACGGGAATAATCAGTATGCT+AGG | + | tig0004148:78097-78116 | Msa1340460:three_prime_UTR | 40.0% | |
| CGGGAATAATCAGTATGCTA+GGG | + | tig0004148:78098-78117 | Msa1340460:three_prime_UTR | 40.0% | |
| GGGAATAATCAGTATGCTAG+GGG | + | tig0004148:78099-78118 | Msa1340460:three_prime_UTR | 40.0% | |
| AATCAGTATGCTAGGGGTTA+TGG | + | tig0004148:78105-78124 | Msa1340460:three_prime_UTR | 40.0% | |
| ATTGATAAATCCCGGTGATG+AGG | + | tig0004148:78254-78273 | Msa1340460:three_prime_UTR | 40.0% | |
| AAACACGATAACCTCATCAC+CGG | - | tig0004148:78268-78287 | None:intergenic | 40.0% | |
| !! | TTTTACTTTTGCACCAGCCA+TGG | - | tig0004148:78325-78344 | None:intergenic | 40.0% |
| ATGGCTGGTGCAAAAGTAAA+AGG | + | tig0004148:78324-78343 | Msa1340460:three_prime_UTR | 40.0% | |
| TCAATGGGTAGAGCAAAATC+TGG | - | tig0004148:78366-78385 | None:intergenic | 40.0% | |
| CACAGACTTCAACTCTTCAA+TGG | - | tig0004148:78382-78401 | None:intergenic | 40.0% | |
| TCTTTCCAGTAGGATTGTGA+GGG | - | tig0004148:74906-74925 | None:intergenic | 40.0% | |
| ATCTTTCCAGTAGGATTGTG+AGG | - | tig0004148:74907-74926 | None:intergenic | 40.0% | |
| ACGGTGACAATGAACTCATT+AGG | + | tig0004148:75069-75088 | Msa1340460:CDS | 40.0% | |
| CGGTGACAATGAACTCATTA+GGG | + | tig0004148:75070-75089 | Msa1340460:CDS | 40.0% | |
| TCCTTGACTGGATGGAAAAT+CGG | + | tig0004148:78636-78655 | Msa1340460:three_prime_UTR | 40.0% | |
| AACCTCAAATCCTATGCAGT+GGG | + | tig0004148:78725-78744 | Msa1340460:three_prime_UTR | 40.0% | |
| ACAAAGTAGGTTCCACTAGA+CGG | - | tig0004148:78867-78886 | None:intergenic | 40.0% | |
| GTGATCTACAACCACAAAGT+AGG | - | tig0004148:78880-78899 | None:intergenic | 40.0% | |
| CGAATATCTAGTTAAGGAGG+TGG | + | tig0004148:78935-78954 | Msa1340460:three_prime_UTR | 40.0% | |
| ! | AGTCCGTTTTACTTTCTGCA+AGG | + | tig0004148:79016-79035 | Msa1340460:three_prime_UTR | 40.0% |
| CAAGGATGAAGGAACTCTTA+GGG | + | tig0004148:79034-79053 | Msa1340460:three_prime_UTR | 40.0% | |
| GGAAAAATCACAATCTAGGC+AGG | - | tig0004148:79231-79250 | None:intergenic | 40.0% | |
| AGGGGGAAAAATCACAATCT+AGG | - | tig0004148:79235-79254 | None:intergenic | 40.0% | |
| TCCCAAATTCGTGTGAAAAC+TGG | + | tig0004148:79384-79403 | Msa1340460:three_prime_UTR | 40.0% | |
| ! | GACCAGTTTTCACACGAATT+TGG | - | tig0004148:79389-79408 | None:intergenic | 40.0% |
| !!! | ATTGGAGCTCTGGGATTTTG+AGG | - | tig0004148:72424-72443 | None:intergenic | 45.0% |
| GAAAACGAAGATTGGAGCTC+TGG | - | tig0004148:72434-72453 | None:intergenic | 45.0% | |
| ! | GGTTTCATTTTCGGTGGACA+TGG | - | tig0004148:72464-72483 | None:intergenic | 45.0% |
| ! | AGAGGTGGTTTCATTTTCGG+TGG | - | tig0004148:72470-72489 | None:intergenic | 45.0% |
| AGTTCGCGAACTGTTTGGTT+CGG | + | tig0004148:72950-72969 | Msa1340460:intron | 45.0% | |
| TCCCTATGCTACACTACCAT+TGG | + | tig0004148:73054-73073 | Msa1340460:intron | 45.0% | |
| !! | TGCTCTCCTTTGAGGTATGA+TGG | - | tig0004148:73305-73324 | None:intergenic | 45.0% |
| GTCTCATCAATGTTGGGATC+CGG | + | tig0004148:73712-73731 | Msa1340460:intron | 45.0% | |
| CGACTAGTAACGCTTCTCAA+TGG | - | tig0004148:73741-73760 | None:intergenic | 45.0% | |
| !! | TGAGAAGCGTTACTAGTCGT+TGG | + | tig0004148:73742-73761 | Msa1340460:intron | 45.0% |
| GGATCCTCTCCAATTCGTAA+CGG | - | tig0004148:73770-73789 | None:intergenic | 45.0% | |
| GCGGAATTCTTCCTTAGTCT+CGG | - | tig0004148:73791-73810 | None:intergenic | 45.0% | |
| TACACAAAGGCCCAATTCAG+CGG | - | tig0004148:73810-73829 | None:intergenic | 45.0% | |
| TGAATTGGGCCTTTGTGTAG+TGG | + | tig0004148:73811-73830 | Msa1340460:intron | 45.0% | |
| GAATTGGGCCTTTGTGTAGT+GGG | + | tig0004148:73812-73831 | Msa1340460:intron | 45.0% | |
| CCAAGTCTCTCATCATCTCA+AGG | - | tig0004148:73838-73857 | None:intergenic | 45.0% | |
| CCTTGAGATGATGAGAGACT+TGG | + | tig0004148:73835-73854 | Msa1340460:intron | 45.0% | |
| AGACACCAACACATCGACAT+TGG | - | tig0004148:74142-74161 | None:intergenic | 45.0% | |
| ! | GTGTTGGTGTCTGTGCTTTA+TGG | + | tig0004148:74150-74169 | Msa1340460:intron | 45.0% |
| AAACTCACACACACAAGTGG+AGG | + | tig0004148:74251-74270 | Msa1340460:intron | 45.0% | |
| GGCGTCCAACCTAACAATTT+CGG | + | tig0004148:74298-74317 | Msa1340460:intron | 45.0% | |
| AGTATGCTTGCCATCACACA+TGG | + | tig0004148:74460-74479 | Msa1340460:intron | 45.0% | |
| TGGAGCTATAAACCTTGGTC+AGG | + | tig0004148:74480-74499 | Msa1340460:intron | 45.0% | |
| GGAGCTATAAACCTTGGTCA+GGG | + | tig0004148:74481-74500 | Msa1340460:intron | 45.0% | |
| GCAATTCAAGCTATCAGGGA+TGG | + | tig0004148:74544-74563 | Msa1340460:CDS | 45.0% | |
| GCAATCGCTGCAACTGTATT+AGG | + | tig0004148:74697-74716 | Msa1340460:intron | 45.0% | |
| ! | GGCACGAGTATTCTTTGAGA+TGG | - | tig0004148:74869-74888 | None:intergenic | 45.0% |
| AATACCCCTCACAATCCTAC+TGG | + | tig0004148:74898-74917 | Msa1340460:CDS | 45.0% | |
| CTTTCCAGTAGGATTGTGAG+GGG | - | tig0004148:74905-74924 | None:intergenic | 45.0% | |
| CGAGTGAACATCTTTCCAGT+AGG | - | tig0004148:74916-74935 | None:intergenic | 45.0% | |
| TGGAAAGATGTTCACTCGAG+AGG | + | tig0004148:74918-74937 | Msa1340460:CDS | 45.0% | |
| GGGAAGTCATTCTCCTTAAC+GGG | + | tig0004148:75090-75109 | Msa1340460:CDS | 45.0% | |
| GGAAGTCATTCTCCTTAACG+GGG | + | tig0004148:75091-75110 | Msa1340460:CDS | 45.0% | |
| ATTTCCCATCCTTTGCAGTG+TGG | + | tig0004148:75192-75211 | Msa1340460:intron | 45.0% | |
| TTTCCCATCCTTTGCAGTGT+GGG | + | tig0004148:75193-75212 | Msa1340460:intron | 45.0% | |
| GTTGAAGGATTGAAGGCTGT+TGG | + | tig0004148:75294-75313 | Msa1340460:intron | 45.0% | |
| ATTGAAGGCTGTTGGGTTCA+AGG | + | tig0004148:75302-75321 | Msa1340460:intron | 45.0% | |
| ! | TTCAAGGTATTCCCGTCCAA+TGG | + | tig0004148:75318-75337 | Msa1340460:intron | 45.0% |
| TCTAATTAAGGAGGTCGGTG+TGG | + | tig0004148:75407-75426 | Msa1340460:CDS | 45.0% | |
| ACTAGATTCTTCCCCTCTTC+TGG | - | tig0004148:75465-75484 | None:intergenic | 45.0% | |
| AAGAGGGGAAGAATCTAGTC+AGG | + | tig0004148:75466-75485 | Msa1340460:CDS | 45.0% | |
| GTTTACTTTCTGCAAGGACG+AGG | + | tig0004148:75488-75507 | Msa1340460:CDS | 45.0% | |
| TAAGGCCTTCTAATGCAGGA+TGG | - | tig0004148:75884-75903 | None:intergenic | 45.0% | |
| TCTGACTTAATGCTTCGCGA+AGG | - | tig0004148:76706-76725 | None:intergenic | 45.0% | |
| ! | CGCGAAGCATTAAGTCAGAA+AGG | + | tig0004148:76707-76726 | Msa1340460:three_prime_UTR | 45.0% |
| GGGTTTATAGGAGAATGAGG+AGG | - | tig0004148:76852-76871 | None:intergenic | 45.0% | |
| TGGGAATTTGGGGGGTTTAT+AGG | - | tig0004148:76864-76883 | None:intergenic | 45.0% | |
| ATGAGAGATGGGAATTTGGG+GGG | - | tig0004148:76872-76891 | None:intergenic | 45.0% | |
| ATTGTCAGTGGAAACAGCAG+TGG | - | tig0004148:76912-76931 | None:intergenic | 45.0% | |
| AAGGGTTTGTGGAAAAGGGA+AGG | + | tig0004148:77096-77115 | Msa1340460:intron | 45.0% | |
| TCTCTGGTCCTTACACCAAT+CGG | - | tig0004148:77765-77784 | None:intergenic | 45.0% | |
| GCTGCTTCCTTTACAAAGTC+TGG | - | tig0004148:78060-78079 | None:intergenic | 45.0% | |
| AAGCAGCCATTCAAGCAATC+AGG | + | tig0004148:78073-78092 | Msa1340460:three_prime_UTR | 45.0% | |
| AGCAGCCATTCAAGCAATCA+GGG | + | tig0004148:78074-78093 | Msa1340460:three_prime_UTR | 45.0% | |
| GAAATGGCAATGTTGAGGTC+TGG | - | tig0004148:78135-78154 | None:intergenic | 45.0% | |
| GCTAGTTGTAGACCCTGAAA+AGG | + | tig0004148:78179-78198 | Msa1340460:three_prime_UTR | 45.0% | |
| TACTGTTACGTCTGGTTGCA+CGG | + | tig0004148:78206-78225 | Msa1340460:three_prime_UTR | 45.0% | |
| GCAATTGCTGCAACTGTGTT+AGG | + | tig0004148:78231-78250 | Msa1340460:three_prime_UTR | 45.0% | |
| AACACGATAACCTCATCACC+GGG | - | tig0004148:78267-78286 | None:intergenic | 45.0% | |
| TGGGTAGAGCAAAATCTGGA+GGG | - | tig0004148:78362-78381 | None:intergenic | 45.0% | |
| ATGGGTAGAGCAAAATCTGG+AGG | - | tig0004148:78363-78382 | None:intergenic | 45.0% | |
| AATACCCCTCACAATCCTAC+TGG | + | tig0004148:74898-74917 | Msa1340460:CDS | 45.0% | |
| CTTTCCAGTAGGATTGTGAG+GGG | - | tig0004148:74905-74924 | None:intergenic | 45.0% | |
| CGAGTGAACATCTTTCCAGT+AGG | - | tig0004148:74916-74935 | None:intergenic | 45.0% | |
| TGGAAAGATGTTCACTCGAG+AGG | + | tig0004148:74918-74937 | Msa1340460:CDS | 45.0% | |
| CTCAATGCAAAGAGAAGCGA+TGG | - | tig0004148:78487-78506 | None:intergenic | 45.0% | |
| AGACATTCTCCTTGACTGGA+TGG | + | tig0004148:78628-78647 | Msa1340460:three_prime_UTR | 45.0% | |
| !! | TGTTAAGTGTGGAGGTGCTA+TGG | - | tig0004148:78667-78686 | None:intergenic | 45.0% |
| TAGCACCTCCACACTTAACA+TGG | + | tig0004148:78667-78686 | Msa1340460:three_prime_UTR | 45.0% | |
| AGCACCTCCACACTTAACAT+GGG | + | tig0004148:78668-78687 | Msa1340460:three_prime_UTR | 45.0% | |
| CAACCTCAAATCCTATGCAG+TGG | + | tig0004148:78724-78743 | Msa1340460:three_prime_UTR | 45.0% | |
| ! | TTCAAGGTATTCCCGTCTAG+TGG | + | tig0004148:78852-78871 | Msa1340460:three_prime_UTR | 45.0% |
| CAAAGTAGGTTCCACTAGAC+GGG | - | tig0004148:78866-78885 | None:intergenic | 45.0% | |
| GTCTAGTGGAACCTACTTTG+TGG | + | tig0004148:78866-78885 | Msa1340460:three_prime_UTR | 45.0% | |
| ! | GTTGTAGATCACACCCCTTT+TGG | + | tig0004148:78888-78907 | Msa1340460:three_prime_UTR | 45.0% |
| GCAAGGATGAAGGAACTCTT+AGG | + | tig0004148:79033-79052 | Msa1340460:three_prime_UTR | 45.0% | |
| CATCACAACTGAGATTCAGG+GGG | - | tig0004148:79252-79271 | None:intergenic | 45.0% | |
| CCATCACAACTGAGATTCAG+GGG | - | tig0004148:79253-79272 | None:intergenic | 45.0% | |
| GCCATCACAACTGAGATTCA+GGG | - | tig0004148:79254-79273 | None:intergenic | 45.0% | |
| AGCCATCACAACTGAGATTC+AGG | - | tig0004148:79255-79274 | None:intergenic | 45.0% | |
| !! | AAAATAAACAATTAATAAAT+AGG | - | tig0004148:76956-76975 | None:intergenic | 5.0% |
| AGGAGTCGTTGGAGAGTGAT+AGG | + | tig0004148:72804-72823 | Msa1340460:intron | 50.0% | |
| GGAGTCGTTGGAGAGTGATA+GGG | + | tig0004148:72805-72824 | Msa1340460:intron | 50.0% | |
| ! | GTTCGACTCGTTTGGTTCGT+GGG | - | tig0004148:73511-73530 | None:intergenic | 50.0% |
| TTGTCAGCCCTAGAGAGTGA+TGG | + | tig0004148:73670-73689 | Msa1340460:intron | 50.0% | |
| GGTCACTCCATCACTCTCTA+GGG | - | tig0004148:73680-73699 | None:intergenic | 50.0% | |
| TCATCAATGTTGGGATCCGG+CGG | + | tig0004148:73715-73734 | Msa1340460:intron | 50.0% | |
| TCGTTGGAGCCGTTACGAAT+TGG | + | tig0004148:73758-73777 | Msa1340460:intron | 50.0% | |
| TTGGAGAGGATCCGAGACTA+AGG | + | tig0004148:73777-73796 | Msa1340460:intron | 50.0% | |
| TCTCAAGGCCCACTACACAA+AGG | - | tig0004148:73823-73842 | None:intergenic | 50.0% | |
| GCGACATAGAACCAAACCAG+AGG | - | tig0004148:74005-74024 | None:intergenic | 50.0% | |
| GCTCCGTCACTTCACATTGA+AGG | + | tig0004148:74023-74042 | Msa1340460:intron | 50.0% | |
| GCGCCTTCAATGTGAAGTGA+CGG | - | tig0004148:74029-74048 | None:intergenic | 50.0% | |
| ! | ACACACACAAGTGGAGGTAC+CGG | + | tig0004148:74257-74276 | Msa1340460:intron | 50.0% |
| CAGGGCTTTCCCAACTTTGA+TGG | + | tig0004148:74499-74518 | Msa1340460:intron | 50.0% | |
| TCAATCGGGACAGCGAAATC+TGG | - | tig0004148:74832-74851 | None:intergenic | 50.0% | |
| CTTTGCCTGGAATGTTCGAG+AGG | + | tig0004148:75046-75065 | Msa1340460:CDS | 50.0% | |
| AGTCATTCTCCTTAACGGGG+TGG | + | tig0004148:75094-75113 | Msa1340460:CDS | 50.0% | |
| ATTCTCCTTAACGGGGTGGA+AGG | + | tig0004148:75098-75117 | Msa1340460:CDS | 50.0% | |
| !! | CATTAAGTGTGGAGGCGCTA+TGG | - | tig0004148:75133-75152 | None:intergenic | 50.0% |
| TAGCGCCTCCACACTTAATG+TGG | + | tig0004148:75133-75152 | Msa1340460:CDS | 50.0% | |
| AGCGCCTCCACACTTAATGT+GGG | + | tig0004148:75134-75153 | Msa1340460:CDS | 50.0% | |
| ACTCCCCACATTAAGTGTGG+AGG | - | tig0004148:75141-75160 | None:intergenic | 50.0% | |
| TTCCCATCCTTTGCAGTGTG+GGG | + | tig0004148:75194-75213 | Msa1340460:intron | 50.0% | |
| ! | CTTGCAGATCACACCCCTTT+TGG | + | tig0004148:75354-75373 | Msa1340460:CDS | 50.0% |
| AATTAAGGAGGTCGGTGTGG+TGG | + | tig0004148:75410-75429 | Msa1340460:CDS | 50.0% | |
| GGCTGCTGTTGAAAGGATGA+AGG | + | tig0004148:75521-75540 | Msa1340460:CDS | 50.0% | |
| ! | TTTCTGGTAGGAAGGACCGA+CGG | - | tig0004148:76670-76689 | None:intergenic | 50.0% |
| TCGGTCCTTCCTACCAGAAA+CGG | + | tig0004148:76670-76689 | Msa1340460:three_prime_UTR | 50.0% | |
| AATGCTTCGCGAAGGTCACA+CGG | - | tig0004148:76698-76717 | None:intergenic | 50.0% | |
| AGGAGAGAATGTGTGCAGCA+GGG | - | tig0004148:76770-76789 | None:intergenic | 50.0% | |
| GGGGGGTTTATAGGAGAATG+AGG | - | tig0004148:76855-76874 | None:intergenic | 50.0% | |
| AGTGGAAACAGCAGTGGACA+TGG | - | tig0004148:76906-76925 | None:intergenic | 50.0% | |
| !!! | CCAATCGGGACGGTTTTGAA+AGG | - | tig0004148:77750-77769 | None:intergenic | 50.0% |
| CCTTTCAAAACCGTCCCGAT+TGG | + | tig0004148:77747-77766 | Msa1340460:intron | 50.0% | |
| AAACCGTCCCGATTGGTGTA+AGG | + | tig0004148:77754-77773 | Msa1340460:intron | 50.0% | |
| CTCTGGTCCTTACACCAATC+GGG | - | tig0004148:77764-77783 | None:intergenic | 50.0% | |
| TATCGTCTGGTAGAAGCAGG+AGG | + | tig0004148:77790-77809 | Msa1340460:intron | 50.0% | |
| ATCGTCTGGTAGAAGCAGGA+GGG | + | tig0004148:77791-77810 | Msa1340460:intron | 50.0% | |
| GCCATTCAAGCAATCAGGGA+CGG | + | tig0004148:78078-78097 | Msa1340460:three_prime_UTR | 50.0% | |
| CCATTCAAGCAATCAGGGAC+GGG | + | tig0004148:78079-78098 | Msa1340460:three_prime_UTR | 50.0% | |
| ! | GAAGCCACTTTATCCATGGC+TGG | + | tig0004148:78309-78328 | Msa1340460:three_prime_UTR | 50.0% |
| TGCACCAGCCATGGATAAAG+TGG | - | tig0004148:78316-78335 | None:intergenic | 50.0% | |
| CTTTGCCAGGAATGTTCGAG+CGG | + | tig0004148:78580-78599 | Msa1340460:three_prime_UTR | 50.0% | |
| GGGAAGACATTCTCCTTGAC+TGG | + | tig0004148:78624-78643 | Msa1340460:three_prime_UTR | 50.0% | |
| !! | GCCGATTTTCCATCCAGTCA+AGG | - | tig0004148:78640-78659 | None:intergenic | 50.0% |
| TGACTGGATGGAAAATCGGC+TGG | + | tig0004148:78640-78659 | Msa1340460:three_prime_UTR | 50.0% | |
| GACTGGATGGAAAATCGGCT+GGG | + | tig0004148:78641-78660 | Msa1340460:three_prime_UTR | 50.0% | |
| GCACCTCCACACTTAACATG+GGG | + | tig0004148:78669-78688 | Msa1340460:three_prime_UTR | 50.0% | |
| ACTCCCCATGTTAAGTGTGG+AGG | - | tig0004148:78675-78694 | None:intergenic | 50.0% | |
| AGCCCACTGCATAGGATTTG+AGG | - | tig0004148:78730-78749 | None:intergenic | 50.0% | |
| GTTGAAGGATTGAAGGCCGT+TGG | + | tig0004148:78828-78847 | Msa1340460:three_prime_UTR | 50.0% | |
| !! | ATTGAAGGCCGTTGGCTTCA+AGG | + | tig0004148:78836-78855 | Msa1340460:three_prime_UTR | 50.0% |
| CGGGAATACCTTGAAGCCAA+CGG | - | tig0004148:78847-78866 | None:intergenic | 50.0% | |
| AGTTAAGGAGGTGGGAGTAG+TGG | + | tig0004148:78944-78963 | Msa1340460:three_prime_UTR | 50.0% | |
| CTCCTTCATCCTCTCAACAG+CGG | - | tig0004148:79060-79079 | None:intergenic | 50.0% | |
| CCCCTGAATCTCAGTTGTGA+TGG | + | tig0004148:79250-79269 | Msa1340460:three_prime_UTR | 50.0% | |
| GGTTTCTGTAGGCACCAGAG+AGG | + | tig0004148:72784-72803 | Msa1340460:intron | 55.0% | |
| ACTCTCCAACGACTCCTCTC+TGG | - | tig0004148:72801-72820 | None:intergenic | 55.0% | |
| ! | GACTCGTTTGGTTCGTGGGT+TGG | - | tig0004148:73507-73526 | None:intergenic | 55.0% |
| ! | GGTTCGACTCGTTTGGTTCG+TGG | - | tig0004148:73512-73531 | None:intergenic | 55.0% |
| CGGTCACTCCATCACTCTCT+AGG | - | tig0004148:73681-73700 | None:intergenic | 55.0% | |
| TAACGCTTCTCAATGGCCGC+CGG | - | tig0004148:73734-73753 | None:intergenic | 55.0% | |
| GGAGCCGTTACGAATTGGAG+AGG | + | tig0004148:73763-73782 | Msa1340460:intron | 55.0% | |
| !! | CACACACAAGTGGAGGTACC+GGG | + | tig0004148:74258-74277 | Msa1340460:intron | 55.0% |
| !! | ACACACAAGTGGAGGTACCG+GGG | + | tig0004148:74259-74278 | Msa1340460:intron | 55.0% |
| !! | TTAGGTTGGACGCCATGAGC+GGG | - | tig0004148:74292-74311 | None:intergenic | 55.0% |
| !! | GTTAGGTTGGACGCCATGAG+CGG | - | tig0004148:74293-74312 | None:intergenic | 55.0% |
| AGTTGGGAAAGCCCTGACCA+AGG | - | tig0004148:74495-74514 | None:intergenic | 55.0% | |
| !! | GGTGCCACTTTATCCATGGC+TGG | + | tig0004148:74775-74794 | Msa1340460:CDS | 55.0% |
| CGCACCAGCCATGGATAAAG+TGG | - | tig0004148:74782-74801 | None:intergenic | 55.0% | |
| TCGGGACAGCGAAATCTGGA+GGG | - | tig0004148:74828-74847 | None:intergenic | 55.0% | |
| ATCGGGACAGCGAAATCTGG+AGG | - | tig0004148:74829-74848 | None:intergenic | 55.0% | |
| GCCTGGAATGTTCGAGAGGA+CGG | + | tig0004148:75050-75069 | Msa1340460:CDS | 55.0% | |
| ACCGTCCTCTCGAACATTCC+AGG | - | tig0004148:75054-75073 | None:intergenic | 55.0% | |
| TCCTTAACGGGGTGGAAGGT+TGG | + | tig0004148:75102-75121 | Msa1340460:CDS | 55.0% | |
| TCCAACCTTCCACCCCGTTA+AGG | - | tig0004148:75106-75125 | None:intergenic | 55.0% | |
| TAACGGGGTGGAAGGTTGGA+TGG | + | tig0004148:75106-75125 | Msa1340460:CDS | 55.0% | |
| AACGGGGTGGAAGGTTGGAT+GGG | + | tig0004148:75107-75126 | Msa1340460:CDS | 55.0% | |
| GCGCCTCCACACTTAATGTG+GGG | + | tig0004148:75135-75154 | Msa1340460:CDS | 55.0% | |
| CGCACTCCCCACATTAAGTG+TGG | - | tig0004148:75144-75163 | None:intergenic | 55.0% | |
| ! | CTTAATGTGGGGAGTGCGAC+AGG | + | tig0004148:75146-75165 | Msa1340460:intron | 55.0% |
| AGCCCCACACTGCAAAGGAT+GGG | - | tig0004148:75199-75218 | None:intergenic | 55.0% | |
| CGGTCCTTCCTACCAGAAAC+GGG | + | tig0004148:76671-76690 | Msa1340460:three_prime_UTR | 55.0% | |
| GGTCCTTCCTACCAGAAACG+GGG | + | tig0004148:76672-76691 | Msa1340460:three_prime_UTR | 55.0% | |
| GGAGAGAATGTGTGCAGCAG+GGG | - | tig0004148:76769-76788 | None:intergenic | 55.0% | |
| GAGGAGAGAATGTGTGCAGC+AGG | - | tig0004148:76771-76790 | None:intergenic | 55.0% | |
| TGGCGGCAGCAATGAGAGAT+GGG | - | tig0004148:76883-76902 | None:intergenic | 55.0% | |
| AACAGCAGTGGACATGGTGG+CGG | - | tig0004148:76900-76919 | None:intergenic | 55.0% | |
| GGAAACAGCAGTGGACATGG+TGG | - | tig0004148:76903-76922 | None:intergenic | 55.0% | |
| GGTCCTTACACCAATCGGGA+CGG | - | tig0004148:77760-77779 | None:intergenic | 55.0% | |
| CCCGTCCCTGATTGCTTGAA+TGG | - | tig0004148:78082-78101 | None:intergenic | 55.0% | |
| CGCACTCCCCATGTTAAGTG+TGG | - | tig0004148:78678-78697 | None:intergenic | 55.0% | |
| ! | CTTAACATGGGGAGTGCGAC+AGG | + | tig0004148:78680-78699 | Msa1340460:three_prime_UTR | 55.0% |
| AGGCACCAGAGAGGAGTCGT+TGG | + | tig0004148:72793-72812 | Msa1340460:intron | 60.0% | |
| ! | TAGGTTGGACGCCATGAGCG+GGG | - | tig0004148:74291-74310 | None:intergenic | 60.0% |
| CAGCCCCACACTGCAAAGGA+TGG | - | tig0004148:75200-75219 | None:intergenic | 60.0% | |
| GTGGCGGCAGCAATGAGAGA+TGG | - | tig0004148:76884-76903 | None:intergenic | 60.0% | |
| GCCAGGAATGTTCGAGCGGA+CGG | + | tig0004148:78584-78603 | Msa1340460:three_prime_UTR | 60.0% | |
| ACCGTCCGCTCGAACATTCC+TGG | - | tig0004148:78588-78607 | None:intergenic | 60.0% | |
| ACTGCAGCAGCCCACTGCAT+AGG | - | tig0004148:78738-78757 | None:intergenic | 60.0% | |
| CTCTTAGGGCCGCTGTTGAG+AGG | + | tig0004148:79048-79067 | Msa1340460:three_prime_UTR | 60.0% | |
| GGCCGCTGTTGAGAGGATGA+AGG | + | tig0004148:79055-79074 | Msa1340460:three_prime_UTR | 60.0% | |
| CATGAGCGGGGTTCGAACCC+CGG | - | tig0004148:74279-74298 | None:intergenic | 65.0% | |
| GCTGCAGCCCCACACTGCAA+AGG | - | tig0004148:75204-75223 | None:intergenic | 65.0% | |
| !! | CGGCCCCGTTTCTGGTAGGA+AGG | - | tig0004148:76678-76697 | None:intergenic | 65.0% |
| !! | CACACGGCCCCGTTTCTGGT+AGG | - | tig0004148:76682-76701 | None:intergenic | 65.0% |
| AGGTCACACGGCCCCGTTTC+TGG | - | tig0004148:76686-76705 | None:intergenic | 65.0% | |
| CGGGGTTCGAACCCCGCTCA+TGG | + | tig0004148:74277-74296 | Msa1340460:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0004148 | gene | 72402 | 79447 | 72402 | ID=Msa1340460;Name=Msa1340460 |
| tig0004148 | mRNA | 72402 | 79447 | 72402 | ID=Msa1340460-mRNA-1;Parent=Msa1340460;Name=Msa1340460-mRNA-1;_AED=0.06;_eAED=0.06;_QI=61|0.14|0.12|1|0.14|0.12|8|1823|335 |
| tig0004148 | exon | 72402 | 72513 | 72402 | ID=Msa1340460-mRNA-1:exon:2618;Parent=Msa1340460-mRNA-1 |
| tig0004148 | exon | 74502 | 74711 | 74502 | ID=Msa1340460-mRNA-1:exon:2619;Parent=Msa1340460-mRNA-1 |
| tig0004148 | exon | 74742 | 74984 | 74742 | ID=Msa1340460-mRNA-1:exon:2620;Parent=Msa1340460-mRNA-1 |
| tig0004148 | exon | 75012 | 75158 | 75012 | ID=Msa1340460-mRNA-1:exon:2621;Parent=Msa1340460-mRNA-1 |
| tig0004148 | exon | 75210 | 75311 | 75210 | ID=Msa1340460-mRNA-1:exon:2622;Parent=Msa1340460-mRNA-1 |
| tig0004148 | exon | 75324 | 75552 | 75324 | ID=Msa1340460-mRNA-1:exon:2623;Parent=Msa1340460-mRNA-1 |
| tig0004148 | exon | 76600 | 76946 | 76600 | ID=Msa1340460-mRNA-1:exon:2624;Parent=Msa1340460-mRNA-1 |
| tig0004148 | exon | 77946 | 79447 | 77946 | ID=Msa1340460-mRNA-1:exon:2625;Parent=Msa1340460-mRNA-1 |
| tig0004148 | five_prime_UTR | 72402 | 72462 | 72402 | ID=Msa1340460-mRNA-1:five_prime_utr;Parent=Msa1340460-mRNA-1 |
| tig0004148 | CDS | 72463 | 72513 | 72463 | ID=Msa1340460-mRNA-1:cds;Parent=Msa1340460-mRNA-1 |
| tig0004148 | CDS | 74502 | 74711 | 74502 | ID=Msa1340460-mRNA-1:cds;Parent=Msa1340460-mRNA-1 |
| tig0004148 | CDS | 74742 | 74984 | 74742 | ID=Msa1340460-mRNA-1:cds;Parent=Msa1340460-mRNA-1 |
| tig0004148 | CDS | 75012 | 75158 | 75012 | ID=Msa1340460-mRNA-1:cds;Parent=Msa1340460-mRNA-1 |
| tig0004148 | CDS | 75210 | 75311 | 75210 | ID=Msa1340460-mRNA-1:cds;Parent=Msa1340460-mRNA-1 |
| tig0004148 | CDS | 75324 | 75552 | 75324 | ID=Msa1340460-mRNA-1:cds;Parent=Msa1340460-mRNA-1 |
| tig0004148 | CDS | 76600 | 76625 | 76600 | ID=Msa1340460-mRNA-1:cds;Parent=Msa1340460-mRNA-1 |
| tig0004148 | three_prime_UTR | 76626 | 76946 | 76626 | ID=Msa1340460-mRNA-1:three_prime_utr;Parent=Msa1340460-mRNA-1 |
| tig0004148 | three_prime_UTR | 77946 | 79447 | 77946 | ID=Msa1340460-mRNA-1:three_prime_utr;Parent=Msa1340460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
