AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1403930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1403930 MtrunA17_Chr3g0127461 98.730 551 7 0 1 551 1 551 0.0 1113
Msa1403930 MtrunA17_Chr1g0146661 64.366 536 129 3 65 545 62 590 0.0 683
Msa1403930 MtrunA17_Chr2g0329651 30.000 290 168 5 175 460 259 517 2.81e-34 137
Msa1403930 MtrunA17_Chr2g0329651 42.105 95 53 2 66 159 43 136 2.05e-12 70.1
Msa1403930 MtrunA17_Chr4g0064141 33.505 194 109 1 345 538 459 632 2.10e-32 132
Msa1403930 MtrunA17_Chr2g0319591 33.040 227 122 5 340 536 206 432 2.56e-29 120
Msa1403930 MtrunA17_Chr2g0319591 39.333 150 72 8 61 193 24 171 1.66e-16 82.0
Msa1403930 MtrunA17_Chr4g0041821 32.243 214 117 4 340 525 202 415 5.42e-29 119
Msa1403930 MtrunA17_Chr1g0183581 40.800 125 72 1 338 460 187 311 1.67e-27 115
Msa1403930 MtrunA17_Chr1g0183581 39.326 89 51 2 69 156 45 131 3.03e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1403930 AT3G49350.1 65.779 526 157 8 29 550 32 538 0.0 643
Msa1403930 AT5G24390.1 61.804 521 175 8 29 545 23 523 0.0 605
Msa1403930 AT5G53570.1 60.076 526 160 9 29 545 58 542 0.0 603
Msa1403930 AT5G53570.2 60.076 526 160 9 29 545 85 569 0.0 603
Msa1403930 AT5G41940.1 59.229 493 186 5 53 544 71 549 0.0 578
Msa1403930 AT2G43490.6 30.085 472 247 15 63 460 38 500 1.08e-49 183
Msa1403930 AT2G43490.8 30.085 472 247 15 63 460 38 500 1.08e-49 183
Msa1403930 AT2G43490.1 30.043 466 243 15 69 460 48 504 3.23e-49 182
Msa1403930 AT2G43490.7 30.043 466 243 15 69 460 48 504 3.23e-49 182
Msa1403930 AT2G43490.3 30.043 466 243 15 69 460 48 504 3.23e-49 182
Msa1403930 AT2G43490.2 30.043 466 243 15 69 460 48 504 3.23e-49 182
Msa1403930 AT2G43490.4 30.043 466 243 15 69 460 48 504 3.36e-49 182
Msa1403930 AT2G43490.5 30.043 466 243 15 69 460 48 504 3.42e-49 181
Msa1403930 AT5G52580.2 28.958 259 151 3 289 538 423 657 3.40e-32 132
Msa1403930 AT5G52580.1 28.958 259 151 3 289 538 406 640 4.16e-32 131
Msa1403930 AT5G52580.3 28.958 259 151 3 289 538 412 646 4.26e-32 131
Msa1403930 AT4G28550.1 32.766 235 129 4 340 549 191 421 1.19e-31 127
Msa1403930 AT4G28550.1 34.211 114 67 3 55 168 31 136 1.73e-13 73.2
Msa1403930 AT3G59570.1 43.443 122 68 1 340 460 387 508 4.61e-30 125
Msa1403930 AT3G59570.1 43.333 90 49 2 69 158 48 135 1.55e-15 80.5
Msa1403930 AT3G59570.2 43.443 122 68 1 340 460 387 508 4.65e-30 125
Msa1403930 AT3G59570.2 43.333 90 49 2 69 158 48 135 1.60e-15 80.1
Msa1403930 AT3G59570.3 43.443 122 68 1 340 460 387 508 5.05e-30 125
Msa1403930 AT3G59570.3 43.333 90 49 2 69 158 48 135 1.51e-15 80.5
Msa1403930 AT2G20440.4 30.638 235 134 4 340 549 75 305 4.98e-29 117
Msa1403930 AT5G54780.1 46.400 125 65 1 338 460 193 317 1.72e-28 118
Msa1403930 AT2G20440.1 30.638 235 134 4 340 549 191 421 1.98e-28 118
Msa1403930 AT2G20440.1 32.174 115 65 3 69 183 40 141 4.37e-14 75.1
Msa1403930 AT2G20440.2 30.638 235 134 4 340 549 191 421 1.98e-28 118
Msa1403930 AT2G20440.2 32.174 115 65 3 69 183 40 141 4.37e-14 75.1
Msa1403930 AT4G27100.2 40.940 149 80 3 319 460 172 319 1.61e-27 115
Msa1403930 AT4G27100.1 40.940 149 80 3 319 460 172 319 2.20e-27 115
Msa1403930 AT4G28550.2 44.167 120 65 1 340 457 191 310 6.59e-26 108
Msa1403930 AT4G28550.2 34.211 114 67 3 55 168 31 136 8.93e-14 73.2
Msa1403930 AT4G28550.3 43.697 119 65 1 340 456 191 309 1.26e-25 108
Msa1403930 AT4G28550.3 34.211 114 67 3 55 168 31 136 1.25e-13 72.8
Msa1403930 AT2G20440.3 41.322 121 69 1 340 458 191 311 1.03e-23 103
Msa1403930 AT2G20440.3 31.061 132 73 4 55 186 31 144 2.77e-14 75.1

Find 209 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGGCAGTAGCCAATTTC+AGG 0.187920 tig0022984:-81754 None:intergenic
CGATAGTGTTGTGGCTTAAA+AGG 0.207241 tig0022984:+82521 Msa1403930:three_prime_UTR
CCTTGATGTTTGGAAGCTTC+TGG 0.224318 tig0022984:+82263 Msa1403930:CDS
GATCGATGTGCCCTACTTTC+TGG 0.228898 tig0022984:-81628 None:intergenic
TCGTTCATTTGAGGAAATTT+TGG 0.229647 tig0022984:-78449 None:intergenic
ATCGAAAGATCTTTACTTAC+AGG 0.240820 tig0022984:+82387 Msa1403930:three_prime_UTR
AAAAGGCCAGGCAGAATTTC+AGG 0.242883 tig0022984:+81857 Msa1403930:CDS
GGCATCAGCGTTGCTGCTGC+TGG 0.251232 tig0022984:-81347 None:intergenic
GCACTATACGACCCTGAAAT+TGG 0.254237 tig0022984:+81742 Msa1403930:CDS
TTCCCACCTGTTTAGGCATT+TGG 0.272963 tig0022984:+81942 Msa1403930:CDS
TCTGATACAACACTAATTAT+AGG 0.273095 tig0022984:-81796 None:intergenic
TCATCTGAATATTCAAAATC+TGG 0.290685 tig0022984:-81289 None:intergenic
TTGAACAGACTCTCTGCCTT+TGG 0.315646 tig0022984:+82037 Msa1403930:CDS
TATAACATCTCTTTCTTGTT+TGG 0.318362 tig0022984:-80924 None:intergenic
TTAAGGATTCCCACCTGTTT+AGG 0.320777 tig0022984:+81935 Msa1403930:CDS
TGCTGAGGCTGTTGGCTTGA+AGG 0.329038 tig0022984:+81651 Msa1403930:CDS
AAAGGGGATTGAAGTTAGTT+AGG 0.336531 tig0022984:+82539 Msa1403930:three_prime_UTR
CAGACATTTCCTTCTGATGA+TGG 0.342218 tig0022984:+81427 Msa1403930:CDS
CAGAAGATCACGAGGCATTC+TGG 0.343497 tig0022984:+81815 Msa1403930:CDS
ATTCACTTTGTTTACAAAAT+CGG 0.343955 tig0022984:-78541 None:intergenic
GAAGTTTGGCCTTTCCTACT+TGG 0.347842 tig0022984:+80489 Msa1403930:CDS
CGAATAAAACCGAACGCAAA+TGG 0.352771 tig0022984:-78673 None:intergenic
TGGCAGGACACCTTGATGTT+TGG 0.354263 tig0022984:+82253 Msa1403930:CDS
GTAAACAAAGTGAATATAGA+AGG 0.359104 tig0022984:+78549 Msa1403930:five_prime_UTR
CTCGTCGCCGTCTTCTTCTA+TGG 0.378174 tig0022984:+78410 Msa1403930:five_prime_UTR
ACAGCTTGAGAGGGAGAGTA+TGG 0.383357 tig0022984:-81601 None:intergenic
ATGTTATACGAACTCAAAAT+AGG 0.383420 tig0022984:+80939 Msa1403930:CDS
CACCGAAAAGGTGTACGAAA+TGG 0.383758 tig0022984:-82654 None:intergenic
CAATGCCAAGACAACTTCTA+AGG 0.390521 tig0022984:+81462 Msa1403930:CDS
GCTGTTGGCGTTCAAGTTAG+TGG 0.392844 tig0022984:-78276 None:intergenic
GGGTTTATTAAAACGAATCT+TGG 0.400334 tig0022984:+82456 Msa1403930:three_prime_UTR
GAGTTCAGATTCAGTCAAAA+AGG 0.404359 tig0022984:-82757 None:intergenic
GATCTTTACTTACAGGCTGC+TGG 0.405567 tig0022984:+82394 Msa1403930:three_prime_UTR
GCAGCAATCAGAGCTGGTAT+AGG 0.405908 tig0022984:+82081 Msa1403930:CDS
TGAACAGACTCTCTGCCTTT+GGG 0.407409 tig0022984:+82038 Msa1403930:CDS
AAAATAAGCACTGCAAAGCC+TGG 0.409362 tig0022984:+82435 Msa1403930:three_prime_UTR
TACGTATCAACTGCGGTCAT+TGG 0.413302 tig0022984:-82344 None:intergenic
TTGAAATTGAAAGGAAGAAA+AGG 0.413610 tig0022984:-82611 None:intergenic
GCATCAGCGTTGCTGCTGCT+GGG 0.413973 tig0022984:-81346 None:intergenic
ATTTCCTTCTGATGATGGTC+TGG 0.416866 tig0022984:+81432 Msa1403930:CDS
CTAGTATCAGAGCTGAAGTT+TGG 0.421208 tig0022984:+80475 Msa1403930:CDS
GATAGTGTTGTGGCTTAAAA+GGG 0.421334 tig0022984:+82522 Msa1403930:three_prime_UTR
CCCACTGGAAAGGGATTCTC+TGG 0.421918 tig0022984:-81257 None:intergenic
CAGCAATCAGAGCTGGTATA+GGG 0.423002 tig0022984:+82082 Msa1403930:CDS
GACGGCGACGAGAGCGATGC+CGG 0.425117 tig0022984:-78399 None:intergenic
GCTCTGTTCCCCACTGGAAA+GGG 0.427085 tig0022984:-81266 None:intergenic
GAAGGGTGACCACCAAGTTA+TGG 0.427485 tig0022984:-82293 None:intergenic
CAAACTTCAGCTCTGATACT+AGG 0.427591 tig0022984:-80474 None:intergenic
GAGCATCATCTCCTTCCAAC+AGG 0.427621 tig0022984:-81324 None:intergenic
AAGGGTGACCACCAAGTTAT+GGG 0.433218 tig0022984:-82292 None:intergenic
GCTTCTCCAAATGCCTAAAC+AGG 0.435797 tig0022984:-81948 None:intergenic
CGCGCTCATGAAAGAGAACT+TGG 0.439192 tig0022984:-78333 None:intergenic
CCCTGAAATTGGCTACTGCC+AGG 0.439699 tig0022984:+81753 Msa1403930:CDS
GCTGTTGGCTTGAAGGATTA+TGG 0.440935 tig0022984:+81658 Msa1403930:CDS
AATCTGCCTGGAGCAGAATT+AGG 0.441068 tig0022984:+82106 Msa1403930:CDS
GGCTCTGTTCCCCACTGGAA+AGG 0.446047 tig0022984:-81267 None:intergenic
TCACCGATCAGAGGATGAAC+AGG 0.462137 tig0022984:-78729 None:intergenic
ATCGTGGATCCATTTGCGTT+CGG 0.465633 tig0022984:+78664 Msa1403930:CDS
ATAACAGATCGCTCATACCC+TGG 0.469354 tig0022984:-81771 None:intergenic
CGTCGGAGAAGAATGGAGTT+TGG 0.470696 tig0022984:-78298 None:intergenic
ATCAAGCCTGAAATTCTGCC+TGG 0.473868 tig0022984:-81863 None:intergenic
CTTGGCAGCGGCGGCGCCGT+CGG 0.475335 tig0022984:-78315 None:intergenic
ACCGAAAAGGTGTACGAAAT+GGG 0.476227 tig0022984:-82653 None:intergenic
CTTGCTGCATCTTCAGAACT+AGG 0.479473 tig0022984:-81232 None:intergenic
ACTATCCTTAGAAGTTGTCT+TGG 0.481401 tig0022984:-81467 None:intergenic
CGATCGCGGATTCTCCCGTC+GGG 0.485149 tig0022984:-80317 None:intergenic
CATCGATCTGCTGAGGCTGT+TGG 0.485665 tig0022984:+81643 Msa1403930:CDS
TTGATGAGGTGGGTATTAGA+AGG 0.486537 tig0022984:+81881 Msa1403930:CDS
ACGCTGCCTAATTCTGCTCC+AGG 0.490066 tig0022984:-82112 None:intergenic
CAACTTAAAGCTCCCACTGT+TGG 0.493755 tig0022984:-81146 None:intergenic
TAGGCATTTGGAGAAGCTCC+AGG 0.494322 tig0022984:+81954 Msa1403930:CDS
ACGGAATGCAATGGCATGGC+AGG 0.494458 tig0022984:+82237 Msa1403930:CDS
GGAATCATTTCATAAGAAGA+AGG 0.494875 tig0022984:+78190 Msa1403930:five_prime_UTR
CAGCCTCAGTGTTACAAAGA+AGG 0.497992 tig0022984:+82172 Msa1403930:CDS
ATCTGGGCTCTGTTCCCCAC+TGG 0.498167 tig0022984:-81272 None:intergenic
ATCTCCTTCCAACAGGGAAA+CGG 0.498807 tig0022984:-81317 None:intergenic
GGTGGCCACCTCTCCGACTA+CGG 0.499988 tig0022984:+78355 Msa1403930:five_prime_UTR
TGGTGGTAGTATTGTTCAGA+AGG 0.501178 tig0022984:+82004 Msa1403930:CDS
TGATCCATCCGTTTCCCTGT+TGG 0.502365 tig0022984:+81309 Msa1403930:CDS
GAATTGTTACTTCTTCTAAG+AGG 0.504212 tig0022984:-78590 None:intergenic
AAGCAATAGTACAAAATAAG+TGG 0.505550 tig0022984:+78059 Msa1403930:five_prime_UTR
TTTGGAGAAGCTCCAGGCCG+AGG 0.506505 tig0022984:+81960 Msa1403930:CDS
GCGGCGCCGTCGGAGAAGAA+TGG 0.509511 tig0022984:-78305 None:intergenic
CTTTGTTTACAAAATCGGAA+TGG 0.511043 tig0022984:-78536 None:intergenic
GATTGCGATTCGTTCATTTG+AGG 0.516123 tig0022984:-78458 None:intergenic
CTGGTATAGGGAAATCTGCC+TGG 0.516875 tig0022984:+82094 Msa1403930:CDS
TCAGAGTGAAGAATTGAGCT+AGG 0.518372 tig0022984:-78489 None:intergenic
GTGGGTCAACACTACGAAGT+AGG 0.518405 tig0022984:+81512 Msa1403930:CDS
TCTGGATGATGCCCATAACT+TGG 0.518938 tig0022984:+82281 Msa1403930:CDS
AGGGAGATAGTATAATAGAG+AGG 0.519906 tig0022984:-78017 None:intergenic
AAGCTGTTGTTCCAGAAAGT+AGG 0.520433 tig0022984:+81617 Msa1403930:CDS
GAATTTCAGGCTTGATGAGG+TGG 0.520596 tig0022984:+81870 Msa1403930:CDS
CTGCCTTTGGGAAGTAATGT+GGG 0.522221 tig0022984:+82050 Msa1403930:CDS
CAGCATGGATGATATCCTTA+CGG 0.525092 tig0022984:+82218 Msa1403930:CDS
TGGAAAGGAACATGGAGGAG+AGG 0.528342 tig0022984:-78256 None:intergenic
TTCTGGAACAACAGCTTGAG+AGG 0.528518 tig0022984:-81611 None:intergenic
TCAGAGGATGAACAGGAAGC+TGG 0.529598 tig0022984:-78722 None:intergenic
TCTGCCTTTGGGAAGTAATG+TGG 0.532088 tig0022984:+82049 Msa1403930:CDS
AGCTGTTGTTCCAGAAAGTA+GGG 0.534724 tig0022984:+81618 Msa1403930:CDS
TGACCCACCTTTCATTTGTG+AGG 0.535259 tig0022984:-81497 None:intergenic
GAGTTGAAATTGAAATTGAA+AGG 0.536691 tig0022984:-82620 None:intergenic
GGGAGATAGTATAATAGAGA+GGG 0.537268 tig0022984:-78016 None:intergenic
GACCCACCTTTCATTTGTGA+GGG 0.537428 tig0022984:-81496 None:intergenic
AGCAATAAATCGTCTGTTGG+TGG 0.537984 tig0022984:-82138 None:intergenic
GGATGAACAGGAAGCTGGTG+AGG 0.538603 tig0022984:-78717 None:intergenic
TGGGTCAACACTACGAAGTA+GGG 0.538976 tig0022984:+81513 Msa1403930:CDS
CTTTAGTTTCGATAGTGTTG+TGG 0.539527 tig0022984:+82512 Msa1403930:three_prime_UTR
CATCTGAATATTCAAAATCT+GGG 0.541125 tig0022984:-81288 None:intergenic
GGAATTTCATTCCACGATCG+CGG 0.541952 tig0022984:-80331 None:intergenic
ACGATCGCGGATTCTCCCGT+CGG 0.548417 tig0022984:-80318 None:intergenic
CTCCCTCACAAATGAAAGGT+GGG 0.548448 tig0022984:+81494 Msa1403930:CDS
CCATGCTGCTATACTTCTCA+AGG 0.550937 tig0022984:-82203 None:intergenic
GGAAATGTCTGAAATACCTC+GGG 0.554770 tig0022984:-81415 None:intergenic
AAGTGTTGTACTCACCGAAA+AGG 0.555310 tig0022984:-82666 None:intergenic
CCTGGCAGTAGCCAATTTCA+GGG 0.555580 tig0022984:-81753 None:intergenic
GATTATGGTCACCTAGATGC+TGG 0.557305 tig0022984:+81673 Msa1403930:CDS
CCTGAAATTGGCTACTGCCA+GGG 0.558212 tig0022984:+81754 Msa1403930:CDS
CTTCCTGTTCATCCTCTGAT+CGG 0.558257 tig0022984:+78726 Msa1403930:CDS
ATCTTTAAGAGTCAAAGGAT+TGG 0.561098 tig0022984:-82781 None:intergenic
GATCAAGCAGCAATCAGAGC+TGG 0.564321 tig0022984:+82075 Msa1403930:CDS
AATTGAAAGGAAGAAAAGGA+TGG 0.564360 tig0022984:-82607 None:intergenic
CGATACAGATTCCACTGACT+CGG 0.565217 tig0022984:+81378 Msa1403930:CDS
TCGGCATCTTTAAGAGTCAA+AGG 0.566636 tig0022984:-82786 None:intergenic
GAAAGAGAACTTGGCAGCGG+CGG 0.568292 tig0022984:-78324 None:intergenic
GAATTCGATGATGATGAAGA+AGG 0.568885 tig0022984:-78641 None:intergenic
ATACTATCTCCCTTCGTAGT+GGG 0.569567 tig0022984:+78027 Msa1403930:five_prime_UTR
TCTCCAAATGCCTAAACAGG+TGG 0.570063 tig0022984:-81945 None:intergenic
AACTGCTAAAATCCAACAGT+GGG 0.570157 tig0022984:+81134 Msa1403930:CDS
GACGGGAGAATCCGCGATCG+TGG 0.570960 tig0022984:+80320 Msa1403930:CDS
ATAGGTGAAGTCAACTATGA+AGG 0.571069 tig0022984:+81175 Msa1403930:CDS
GAAGAATGGAGTTTGGCTGT+TGG 0.571123 tig0022984:-78291 None:intergenic
TTCTGAGGAATCCGAGTCAG+TGG 0.572266 tig0022984:-81389 None:intergenic
AAAAGCAATAAATCGTCTGT+TGG 0.573940 tig0022984:-82141 None:intergenic
CAGTACGTGCCAATGCAGAA+TGG 0.574385 tig0022984:+81575 Msa1403930:CDS
CAAGTTAGTGGAAAGGAACA+TGG 0.574857 tig0022984:-78264 None:intergenic
AGCTTTAAGTTGATTGACAT+AGG 0.577688 tig0022984:+81157 Msa1403930:CDS
CCATCCGTTTCCCTGTTGGA+AGG 0.578648 tig0022984:+81313 Msa1403930:CDS
AAATAAGCACTGCAAAGCCT+GGG 0.578742 tig0022984:+82436 Msa1403930:three_prime_UTR
GTCAGTGGAATCTGTATCGA+GGG 0.579303 tig0022984:-81374 None:intergenic
CCAGAAGCTTCCAAACATCA+AGG 0.579998 tig0022984:-82263 None:intergenic
CACCGCCGTAGTCGGAGAGG+TGG 0.580700 tig0022984:-78360 None:intergenic
GTGAAAAGCACCGCCGTAGT+CGG 0.581358 tig0022984:-78368 None:intergenic
TCTCCCTCACAAATGAAAGG+TGG 0.583366 tig0022984:+81493 Msa1403930:CDS
TTGTCTCTCTCCCACTACGA+AGG 0.585901 tig0022984:-78037 None:intergenic
AAATACCTCGGGACTTTCTG+AGG 0.586290 tig0022984:-81404 None:intergenic
GTATGGCATCCATTCTGCAT+TGG 0.588420 tig0022984:-81584 None:intergenic
TCTTCTCCCTCACAAATGAA+AGG 0.589731 tig0022984:+81490 Msa1403930:CDS
CCAGAGAATCCCTTTCCAGT+GGG 0.590141 tig0022984:+81257 Msa1403930:CDS
CAAGTTCTCTTTCATGAGCG+CGG 0.590204 tig0022984:+78334 Msa1403930:five_prime_UTR
CAGAGTGAAGAATTGAGCTA+GGG 0.591888 tig0022984:-78488 None:intergenic
ACTTGATATGCTTACTCAGT+CGG 0.592478 tig0022984:-82805 None:intergenic
AGAATGCTTACACTCCAAGT+AGG 0.593658 tig0022984:-80503 None:intergenic
GCAGTTGTCGGCATTGTCTG+CGG 0.593769 tig0022984:-81117 None:intergenic
ATCGCGGATTCTCCCGTCGG+GGG 0.595937 tig0022984:-80315 None:intergenic
GCAGAATTTCAGGCTTGATG+AGG 0.597261 tig0022984:+81867 Msa1403930:CDS
CCATGCCATTGCATTCCGTA+AGG 0.597871 tig0022984:-82233 None:intergenic
GGATGATGCCCATAACTTGG+TGG 0.598717 tig0022984:+82284 Msa1403930:CDS
AGGAAATGTCTGAAATACCT+CGG 0.600009 tig0022984:-81416 None:intergenic
TAAAGATCATAAATAAGCAG+TGG 0.600733 tig0022984:-82494 None:intergenic
CTCCAAATGCCTAAACAGGT+GGG 0.604678 tig0022984:-81944 None:intergenic
GAAGTCAACTATGAAGGAGA+TGG 0.604996 tig0022984:+81181 Msa1403930:CDS
GCTTACACTCCAAGTAGGAA+AGG 0.606813 tig0022984:-80498 None:intergenic
AATTTCAGGCTTGATGAGGT+GGG 0.609387 tig0022984:+81871 Msa1403930:CDS
GACTGAGTAAGCATATCAAG+TGG 0.610322 tig0022984:+82807 Msa1403930:three_prime_UTR
TCTGGAACAACAGCTTGAGA+GGG 0.610648 tig0022984:-81610 None:intergenic
AAGGACAAATTGTATTGTCG+AGG 0.611232 tig0022984:-82738 None:intergenic
GTGTCCTTTCTCCTCAACAA+TGG 0.613177 tig0022984:+80279 Msa1403930:CDS
TGGCGTTCAAGTTAGTGGAA+AGG 0.617167 tig0022984:-78271 None:intergenic
TCTTCCAGACCATCATCAGA+AGG 0.618152 tig0022984:-81436 None:intergenic
GCCAGAGAATCCCTTTCCAG+TGG 0.621665 tig0022984:+81256 Msa1403930:CDS
GGTGGTAGTATTGTTCAGAA+GGG 0.622086 tig0022984:+82005 Msa1403930:CDS
TATACTATCTCCCTTCGTAG+TGG 0.622916 tig0022984:+78026 Msa1403930:five_prime_UTR
AAGACTTTGCCACATGGCAA+CGG 0.623278 tig0022984:+81536 Msa1403930:CDS
GGAATCTGTATCGAGGGCAG+AGG 0.624799 tig0022984:-81368 None:intergenic
CCTTCCAACAGGGAAACGGA+TGG 0.626826 tig0022984:-81313 None:intergenic
CATGAAAGAGAACTTGGCAG+CGG 0.626990 tig0022984:-78327 None:intergenic
GTAGGGAAGACTTTGCCACA+TGG 0.627542 tig0022984:+81530 Msa1403930:CDS
AAACGAAGAACAATCGTGGA+GGG 0.628224 tig0022984:+78213 Msa1403930:five_prime_UTR
AGCATCATCTCCTTCCAACA+GGG 0.628935 tig0022984:-81323 None:intergenic
ATAGTGTTGTGGCTTAAAAG+GGG 0.631914 tig0022984:+82523 Msa1403930:three_prime_UTR
CCTTACGGAATGCAATGGCA+TGG 0.633745 tig0022984:+82233 Msa1403930:CDS
TGTCTCTCTCCCACTACGAA+GGG 0.634331 tig0022984:-78036 None:intergenic
GATATCCTTACGGAATGCAA+TGG 0.638476 tig0022984:+82228 Msa1403930:CDS
CCTTGAGAAGTATAGCAGCA+TGG 0.641797 tig0022984:+82203 Msa1403930:CDS
TCTTCTTCTATGGTGCAAGT+AGG 0.644901 tig0022984:+78420 Msa1403930:five_prime_UTR
AACGAAGAACAATCGTGGAG+GGG 0.647287 tig0022984:+78214 Msa1403930:five_prime_UTR
TAGGGCACATCGATCTGCTG+AGG 0.650584 tig0022984:+81636 Msa1403930:CDS
GTTCTCTTTCATGAGCGCGG+TGG 0.656781 tig0022984:+78337 Msa1403930:five_prime_UTR
CTGCCCACATTACTTCCCAA+AGG 0.659441 tig0022984:-82053 None:intergenic
CAAACTCCATTCTTCTCCGA+CGG 0.661554 tig0022984:+78299 Msa1403930:five_prime_UTR
AAGCACCGCCGTAGTCGGAG+AGG 0.664914 tig0022984:-78363 None:intergenic
GATCGCGGATTCTCCCGTCG+GGG 0.667812 tig0022984:-80316 None:intergenic
AAGGAAACGAAGAACAATCG+TGG 0.667872 tig0022984:+78209 Msa1403930:five_prime_UTR
AGTCAGTGGAATCTGTATCG+AGG 0.671427 tig0022984:-81375 None:intergenic
ACTTGCACCATAGAAGAAGA+CGG 0.674879 tig0022984:-78417 None:intergenic
TTTCCTTCTTTGTAACACTG+AGG 0.675398 tig0022984:-82175 None:intergenic
TCGGATGATCCGTTGCCATG+TGG 0.681927 tig0022984:-81545 None:intergenic
GGCCACCTCTCCGACTACGG+CGG 0.689019 tig0022984:+78358 Msa1403930:five_prime_UTR
TGGCACGTACTGCATCAAGT+CGG 0.689956 tig0022984:-81564 None:intergenic
CAGAGAATCCCTTTCCAGTG+GGG 0.692115 tig0022984:+81258 Msa1403930:CDS
CAACTGCTAAAATCCAACAG+TGG 0.696442 tig0022984:+81133 Msa1403930:CDS
GAAACGAAGAACAATCGTGG+AGG 0.701859 tig0022984:+78212 Msa1403930:five_prime_UTR
CATCATCATCGAATTCATCG+TGG 0.706692 tig0022984:+78648 Msa1403930:CDS
TGTTGTATCAGAAGATCACG+AGG 0.721800 tig0022984:+81807 Msa1403930:CDS
GGATTCCTCAGAAAGTCCCG+AGG 0.734543 tig0022984:+81399 Msa1403930:CDS
GTTAGTGGAAAGGAACATGG+AGG 0.744398 tig0022984:-78261 None:intergenic
AGTAGTTTACGTATCAACTG+CGG 0.754226 tig0022984:-82351 None:intergenic
TTCCTGAAAAGAGTTCGCAG+CGG 0.769164 tig0022984:+80350 Msa1403930:CDS
GAGGTCGTCTTAAATCACCG+TGG 0.833062 tig0022984:+80237 Msa1403930:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATATATTTTTTTTTT+TGG + tig0022984:80021-80040 Msa1403930:intron 0.0%
!!! ATATATATATTTTTTTTTTT+GGG + tig0022984:80022-80041 Msa1403930:intron 0.0%
!!! AATGAAATAATATATTTTTC+TGG + tig0022984:80100-80119 Msa1403930:intron 10.0%
!!! ATGAAATAATATATTTTTCT+GGG + tig0022984:80101-80120 Msa1403930:intron 10.0%
!! AAAATAGAAAGAAAAAAAAT+TGG - tig0022984:80837-80856 None:intergenic 10.0%
!!! AAGTTTTGATTTTTATAAGA+AGG + tig0022984:78989-79008 Msa1403930:intron 15.0%
!!! AGTTTTGATTTTTATAAGAA+GGG + tig0022984:78990-79009 Msa1403930:intron 15.0%
!! CAAGTTATATAAAAATCAAA+AGG - tig0022984:79161-79180 None:intergenic 15.0%
!! TATTACAAGCAAAAATTTAT+GGG - tig0022984:79580-79599 None:intergenic 15.0%
!!! AAAAAATTAACTTGTTATGA+GGG - tig0022984:79618-79637 None:intergenic 15.0%
!!! AAAAAAATTAACTTGTTATG+AGG - tig0022984:79619-79638 None:intergenic 15.0%
!!! ATTTAATCATTTTAGCATTA+TGG + tig0022984:79812-79831 Msa1403930:intron 15.0%
!!! TACATAAAAATATTTTAGTG+TGG + tig0022984:79849-79868 Msa1403930:intron 15.0%
!! CTAAATGATGTTTATTTATT+TGG + tig0022984:80540-80559 Msa1403930:intron 15.0%
!! AGAAAATATAATAAATGACA+AGG - tig0022984:80796-80815 None:intergenic 15.0%
!! CATTTATTTAGACATTTATA+TGG + tig0022984:80857-80876 Msa1403930:intron 15.0%
!!! TGTTTTGTTTTGTTTTGTTT+TGG - tig0022984:78117-78136 None:intergenic 20.0%
!!! AAAAAAAAAAACACGTTTTG+CGG + tig0022984:78169-78188 Msa1403930:five_prime_UTR 20.0%
!!! ATTCACTTTGTTTACAAAAT+CGG - tig0022984:78544-78563 None:intergenic 20.0%
!!! AATCAGCATATTTCTAATTT+TGG + tig0022984:78878-78897 Msa1403930:intron 20.0%
!!! ATCAGCATATTTCTAATTTT+GGG + tig0022984:78879-78898 Msa1403930:intron 20.0%
!!! GTTTTGATTTTTATAAGAAG+GGG + tig0022984:78991-79010 Msa1403930:intron 20.0%
!! AAAATCCAAAACAAGATAAA+AGG - tig0022984:79134-79153 None:intergenic 20.0%
!! TATGATAAATTACCATGTTT+AGG + tig0022984:79203-79222 Msa1403930:intron 20.0%
!! ATGATAAATTACCATGTTTA+GGG + tig0022984:79204-79223 Msa1403930:intron 20.0%
!!! TAAGAAAGAAATGTTTTTTC+TGG + tig0022984:79371-79390 Msa1403930:intron 20.0%
!!! TTAGTATTCTAGATATTTTC+TGG + tig0022984:79472-79491 Msa1403930:intron 20.0%
!! TTAAATAGAGTAAAGAAAGA+GGG - tig0022984:79550-79569 None:intergenic 20.0%
!! TTTAAATAGAGTAAAGAAAG+AGG - tig0022984:79551-79570 None:intergenic 20.0%
!! CTATTACAAGCAAAAATTTA+TGG - tig0022984:79581-79600 None:intergenic 20.0%
!!! AATTTTTGCTTGTAATAGTT+TGG + tig0022984:79583-79602 Msa1403930:intron 20.0%
!! TACATATGAAATCAAAATAC+TGG - tig0022984:79731-79750 None:intergenic 20.0%
!! TTTCATATGTACATTTATAG+AGG + tig0022984:79740-79759 Msa1403930:intron 20.0%
!! AAACATCATTTATGACATTT+AGG - tig0022984:80141-80160 None:intergenic 20.0%
!! ATGAAAGATCAAATACTAAT+GGG - tig0022984:80648-80667 None:intergenic 20.0%
!! TATGAAAGATCAAATACTAA+TGG - tig0022984:80649-80668 None:intergenic 20.0%
!! ATAGAAAGAAAAAAAATTGG+AGG - tig0022984:80834-80853 None:intergenic 20.0%
!!! TTTTGTTGGATTTATGAAAA+AGG + tig0022984:81840-81859 Msa1403930:CDS 20.0%
!! TGCAAAAATAATCAAGTTTA+AGG + tig0022984:81918-81937 Msa1403930:CDS 20.0%
!!! TATCTTCATTTTATCATGAA+GGG - tig0022984:82313-82332 None:intergenic 20.0%
!!! TCTCTGTTTTTTTTTTCTTT+TGG + tig0022984:82582-82601 Msa1403930:three_prime_UTR 20.0%
! AAGCAATAGTACAAAATAAG+TGG + tig0022984:78059-78078 Msa1403930:five_prime_UTR 25.0%
!!! TGTTTTGTTTTGTTTTGGTT+TGG - tig0022984:78112-78131 None:intergenic 25.0%
! GTAAACAAAGTGAATATAGA+AGG + tig0022984:78549-78568 Msa1403930:five_prime_UTR 25.0%
!!! TCAGCATATTTCTAATTTTG+GGG + tig0022984:78880-78899 Msa1403930:intron 25.0%
! AAAAGGACTAGATAATTAGA+GGG + tig0022984:79025-79044 Msa1403930:intron 25.0%
!!! TCTCTATTTTGGTTTATTTG+CGG + tig0022984:79055-79074 Msa1403930:intron 25.0%
!! AATTACATTTTCCCTAAACA+TGG - tig0022984:79218-79237 None:intergenic 25.0%
! CAAAATACAAAGCTAGAAAA+GGG - tig0022984:79278-79297 None:intergenic 25.0%
! TTTAAGTGAGTATGTTCATT+TGG + tig0022984:79343-79362 Msa1403930:intron 25.0%
!!! TTGGTGTTTAACTTGATTTA+AGG + tig0022984:79408-79427 Msa1403930:intron 25.0%
! ATCAAGCATTACAATTCTTT+AGG + tig0022984:79447-79466 Msa1403930:intron 25.0%
! TATATTGTCTATGTAAGTTG+AGG + tig0022984:79771-79790 Msa1403930:intron 25.0%
! TATCATTTCATTACCGTTAA+TGG - tig0022984:79878-79897 None:intergenic 25.0%
!! GCTTGAATGTAAATAAGTTT+TGG - tig0022984:80181-80200 None:intergenic 25.0%
! CTGTTTAGATTTCAATTTAG+TGG + tig0022984:80392-80411 Msa1403930:intron 25.0%
!!! TTTATTTATTTGGTGCATCT+AGG + tig0022984:80550-80569 Msa1403930:intron 25.0%
!!! TTTTTCAAAATTCAGTGTGA+TGG + tig0022984:80691-80710 Msa1403930:intron 25.0%
! TATAACATCTCTTTCTTGTT+TGG - tig0022984:80927-80946 None:intergenic 25.0%
! ATGTTATACGAACTCAAAAT+AGG + tig0022984:80939-80958 Msa1403930:CDS 25.0%
! CTTGATTCATCATATTTCTT+TGG + tig0022984:80991-81010 Msa1403930:intron 25.0%
! TAAACTGAACAAAAGGATAA+AGG - tig0022984:81042-81061 None:intergenic 25.0%
! AGTATGTTAAACTGAACAAA+AGG - tig0022984:81049-81068 None:intergenic 25.0%
! CATCTGAATATTCAAAATCT+GGG - tig0022984:81291-81310 None:intergenic 25.0%
! TCATCTGAATATTCAAAATC+TGG - tig0022984:81292-81311 None:intergenic 25.0%
! TCTGATACAACACTAATTAT+AGG - tig0022984:81799-81818 None:intergenic 25.0%
!! CTATCTTCATTTTATCATGA+AGG - tig0022984:82314-82333 None:intergenic 25.0%
! TAAAGATCATAAATAAGCAG+TGG - tig0022984:82497-82516 None:intergenic 25.0%
!! TAGTTAGGTTTTACATATCA+TGG + tig0022984:82554-82573 Msa1403930:three_prime_UTR 25.0%
! TTGAAATTGAAAGGAAGAAA+AGG - tig0022984:82614-82633 None:intergenic 25.0%
! GAGTTGAAATTGAAATTGAA+AGG - tig0022984:82623-82642 None:intergenic 25.0%
!!! TTGGTTTGGTTTTGATTTTG+AGG - tig0022984:78098-78117 None:intergenic 30.0%
GGAATCATTTCATAAGAAGA+AGG + tig0022984:78190-78209 Msa1403930:five_prime_UTR 30.0%
! TCGTTCATTTGAGGAAATTT+TGG - tig0022984:78452-78471 None:intergenic 30.0%
! CTTTGTTTACAAAATCGGAA+TGG - tig0022984:78539-78558 None:intergenic 30.0%
! GAATTGTTACTTCTTCTAAG+AGG - tig0022984:78593-78612 None:intergenic 30.0%
AAAAATGAAGTGAGAGAAAG+AGG - tig0022984:78770-78789 None:intergenic 30.0%
ATATCGAAAAATTCGAGATC+TGG - tig0022984:78826-78845 None:intergenic 30.0%
! TTTTTATAAGAAGGGGAAGA+AGG + tig0022984:78998-79017 Msa1403930:intron 30.0%
! TTTTATAAGAAGGGGAAGAA+GGG + tig0022984:78999-79018 Msa1403930:intron 30.0%
GAAAAGGACTAGATAATTAG+AGG + tig0022984:79024-79043 Msa1403930:intron 30.0%
!! AAGCTCCTTTTATCTTGTTT+TGG + tig0022984:79126-79145 Msa1403930:intron 30.0%
GCAAAATACAAAGCTAGAAA+AGG - tig0022984:79279-79298 None:intergenic 30.0%
TCTGGACAAAATCAAATCTT+TGG + tig0022984:79389-79408 Msa1403930:intron 30.0%
!! AATTAACTTGTTATGAGGGA+GGG - tig0022984:79614-79633 None:intergenic 30.0%
!! AAATTAACTTGTTATGAGGG+AGG - tig0022984:79615-79634 None:intergenic 30.0%
TGTCAAGTGCTTATTTATGT+CGG + tig0022984:79662-79681 Msa1403930:intron 30.0%
TGGCTTATGAAAAGCTTATA+TGG - tig0022984:79697-79716 None:intergenic 30.0%
AATCAAAATACTGGTGAGTT+TGG - tig0022984:79722-79741 None:intergenic 30.0%
TTTAGTGTGGAATCCATTAA+CGG + tig0022984:79862-79881 Msa1403930:intron 30.0%
ACAATCACATTGGAAAAAAG+TGG - tig0022984:79965-79984 None:intergenic 30.0%
ACCAAGTATATCTATTTCAC+TGG + tig0022984:80056-80075 Msa1403930:intron 30.0%
TCCAGTGAAATAGATATACT+TGG - tig0022984:80060-80079 None:intergenic 30.0%
ATTCTTTGTGACAATTTCAG+AGG + tig0022984:80218-80237 Msa1403930:intron 30.0%
! AAAGGACACGTTTTCTTTTT+CGG - tig0022984:80268-80287 None:intergenic 30.0%
! GATTTCAATTTAGTGGCTTT+TGG + tig0022984:80399-80418 Msa1403930:intron 30.0%
GAAATATGATGAATCAAGCA+TGG - tig0022984:80989-81008 None:intergenic 30.0%
!! AGCTTTAAGTTGATTGACAT+AGG + tig0022984:81157-81176 Msa1403930:CDS 30.0%
!!! GTGAGTTTTATTCAAGATTC+TGG + tig0022984:81205-81224 Msa1403930:CDS 30.0%
! AATTTTTCATGCTGCTAGAT+TGG + tig0022984:81699-81718 Msa1403930:CDS 30.0%
AAAAGCAATAAATCGTCTGT+TGG - tig0022984:82144-82163 None:intergenic 30.0%
ATCGAAAGATCTTTACTTAC+AGG + tig0022984:82387-82406 Msa1403930:three_prime_UTR 30.0%
!! AGATTCGTTTTAATAAACCC+AGG - tig0022984:82456-82475 None:intergenic 30.0%
GGGTTTATTAAAACGAATCT+TGG + tig0022984:82456-82475 Msa1403930:three_prime_UTR 30.0%
AATTGAAAGGAAGAAAAGGA+TGG - tig0022984:82610-82629 None:intergenic 30.0%
! ATCTTTAAGAGTCAAAGGAT+TGG - tig0022984:82784-82803 None:intergenic 30.0%
GGGAGATAGTATAATAGAGA+GGG - tig0022984:78019-78038 None:intergenic 35.0%
AGGGAGATAGTATAATAGAG+AGG - tig0022984:78020-78039 None:intergenic 35.0%
! GAATTCGATGATGATGAAGA+AGG - tig0022984:78644-78663 None:intergenic 35.0%
ACTGACACTGATAACAAGAT+CGG - tig0022984:78851-78870 None:intergenic 35.0%
! GTGTAGGAATGGTTAATTTG+TGG + tig0022984:78933-78952 Msa1403930:intron 35.0%
! AGGGAGATAGATCTCTATTT+TGG + tig0022984:79044-79063 Msa1403930:intron 35.0%
! CATAGACAACTTGATTTGAC+AGG - tig0022984:79187-79206 None:intergenic 35.0%
GTGATGATTGTGATCTTGAT+TGG + tig0022984:79243-79262 Msa1403930:intron 35.0%
! ACAAAGCTAGAAAAGGGTTT+TGG - tig0022984:79272-79291 None:intergenic 35.0%
TTAGATCTTCCTAAGCTAGA+AGG + tig0022984:79299-79318 Msa1403930:intron 35.0%
!! ATAGATCATCCTTCTAGCTT+AGG - tig0022984:79311-79330 None:intergenic 35.0%
! AAAGAGTTTGAGAGAGCATA+TGG - tig0022984:79643-79662 None:intergenic 35.0%
AAATACTGGTGAGTTTGGAT+TGG - tig0022984:79717-79736 None:intergenic 35.0%
TGATTGTAGAAAGCCACAAT+TGG + tig0022984:79978-79997 Msa1403930:intron 35.0%
! TTTTCCATTGTTGAGGAGAA+AGG - tig0022984:80286-80305 None:intergenic 35.0%
! AACAAGCTTTTCCATTGTTG+AGG - tig0022984:80293-80312 None:intergenic 35.0%
ATGCTATGAATGTATGATGC+AGG + tig0022984:80443-80462 Msa1403930:intron 35.0%
TGCTATGAATGTATGATGCA+GGG + tig0022984:80444-80463 Msa1403930:intron 35.0%
TCTGCTTCATGTTATGCATT+AGG + tig0022984:80756-80775 Msa1403930:intron 35.0%
!! TGTTGGATTTTAGCAGTTGT+CGG - tig0022984:81132-81151 None:intergenic 35.0%
AACTGCTAAAATCCAACAGT+GGG + tig0022984:81134-81153 Msa1403930:CDS 35.0%
ATAGGTGAAGTCAACTATGA+AGG + tig0022984:81175-81194 Msa1403930:CDS 35.0%
! AGGAAATGTCTGAAATACCT+CGG - tig0022984:81419-81438 None:intergenic 35.0%
ACTATCCTTAGAAGTTGTCT+TGG - tig0022984:81470-81489 None:intergenic 35.0%
TTGGATTTATGAAAAAGGCC+AGG + tig0022984:81845-81864 Msa1403930:CDS 35.0%
GTAAACGAAAAAGCAATCCT+CGG - tig0022984:81980-81999 None:intergenic 35.0%
!!! AGGATTGCTTTTTCGTTTAC+AGG + tig0022984:81980-81999 Msa1403930:CDS 35.0%
!!! TTGCTTTTTCGTTTACAGGA+TGG + tig0022984:81984-82003 Msa1403930:CDS 35.0%
TTTCCTTCTTTGTAACACTG+AGG - tig0022984:82178-82197 None:intergenic 35.0%
AGTAGTTTACGTATCAACTG+CGG - tig0022984:82354-82373 None:intergenic 35.0%
! CTTTAGTTTCGATAGTGTTG+TGG + tig0022984:82512-82531 Msa1403930:three_prime_UTR 35.0%
GATAGTGTTGTGGCTTAAAA+GGG + tig0022984:82522-82541 Msa1403930:three_prime_UTR 35.0%
ATAGTGTTGTGGCTTAAAAG+GGG + tig0022984:82523-82542 Msa1403930:three_prime_UTR 35.0%
AAAGGGGATTGAAGTTAGTT+AGG + tig0022984:82539-82558 Msa1403930:three_prime_UTR 35.0%
AAGGACAAATTGTATTGTCG+AGG - tig0022984:82741-82760 None:intergenic 35.0%
GAGTTCAGATTCAGTCAAAA+AGG - tig0022984:82760-82779 None:intergenic 35.0%
ACTTGATATGCTTACTCAGT+CGG - tig0022984:82808-82827 None:intergenic 35.0%
TATACTATCTCCCTTCGTAG+TGG + tig0022984:78026-78045 Msa1403930:five_prime_UTR 40.0%
ATACTATCTCCCTTCGTAGT+GGG + tig0022984:78027-78046 Msa1403930:five_prime_UTR 40.0%
AAGGAAACGAAGAACAATCG+TGG + tig0022984:78209-78228 Msa1403930:five_prime_UTR 40.0%
AAACGAAGAACAATCGTGGA+GGG + tig0022984:78213-78232 Msa1403930:five_prime_UTR 40.0%
CAAGTTAGTGGAAAGGAACA+TGG - tig0022984:78267-78286 None:intergenic 40.0%
ACTTGCACCATAGAAGAAGA+CGG - tig0022984:78420-78439 None:intergenic 40.0%
TCTTCTTCTATGGTGCAAGT+AGG + tig0022984:78420-78439 Msa1403930:five_prime_UTR 40.0%
GATTGCGATTCGTTCATTTG+AGG - tig0022984:78461-78480 None:intergenic 40.0%
CAGAGTGAAGAATTGAGCTA+GGG - tig0022984:78491-78510 None:intergenic 40.0%
TCAGAGTGAAGAATTGAGCT+AGG - tig0022984:78492-78511 None:intergenic 40.0%
CATCATCATCGAATTCATCG+TGG + tig0022984:78648-78667 Msa1403930:CDS 40.0%
CGAATAAAACCGAACGCAAA+TGG - tig0022984:78676-78695 None:intergenic 40.0%
AAGAAAAACTCACCGATCAG+AGG - tig0022984:78741-78760 None:intergenic 40.0%
! TTGTTCTGAGTGTGTAGGAA+TGG + tig0022984:78922-78941 Msa1403930:intron 40.0%
TGATGTGTCACAAGTCTTCA+AGG + tig0022984:79506-79525 Msa1403930:intron 40.0%
GAGTAAAGAAAGAGGGCAAA+AGG - tig0022984:79543-79562 None:intergenic 40.0%
GTGGCTTTCTACAATCACAT+TGG - tig0022984:79975-79994 None:intergenic 40.0%
! TAGAAAGCCACAATTGGCTT+GGG + tig0022984:79984-80003 Msa1403930:intron 40.0%
!!! TAAGTTTTGGAACAGAGAGC+AGG - tig0022984:80168-80187 None:intergenic 40.0%
! CAAACTTCAGCTCTGATACT+AGG - tig0022984:80477-80496 None:intergenic 40.0%
CTAGTATCAGAGCTGAAGTT+TGG + tig0022984:80475-80494 Msa1403930:CDS 40.0%
AGAATGCTTACACTCCAAGT+AGG - tig0022984:80506-80525 None:intergenic 40.0%
!! ACAAACACGTCTTCTAAAGC+CGG + tig0022984:80589-80608 Msa1403930:intron 40.0%
GCTCAATGTATATGCAATGC+CGG - tig0022984:80611-80630 None:intergenic 40.0%
CAACTGCTAAAATCCAACAG+TGG + tig0022984:81133-81152 Msa1403930:CDS 40.0%
GAAGTCAACTATGAAGGAGA+TGG + tig0022984:81181-81200 Msa1403930:CDS 40.0%
! GGAAATGTCTGAAATACCTC+GGG - tig0022984:81418-81437 None:intergenic 40.0%
CAGACATTTCCTTCTGATGA+TGG + tig0022984:81427-81446 Msa1403930:CDS 40.0%
!! ATTTCCTTCTGATGATGGTC+TGG + tig0022984:81432-81451 Msa1403930:CDS 40.0%
CAATGCCAAGACAACTTCTA+AGG + tig0022984:81462-81481 Msa1403930:CDS 40.0%
TCTTCTCCCTCACAAATGAA+AGG + tig0022984:81490-81509 Msa1403930:CDS 40.0%
AAGCTGTTGTTCCAGAAAGT+AGG + tig0022984:81617-81636 Msa1403930:CDS 40.0%
AGCTGTTGTTCCAGAAAGTA+GGG + tig0022984:81618-81637 Msa1403930:CDS 40.0%
GAAAAATTCTGCCAGCATCT+AGG - tig0022984:81687-81706 None:intergenic 40.0%
TGTTGTATCAGAAGATCACG+AGG + tig0022984:81807-81826 Msa1403930:CDS 40.0%
AATTTCAGGCTTGATGAGGT+GGG + tig0022984:81871-81890 Msa1403930:CDS 40.0%
TTGATGAGGTGGGTATTAGA+AGG + tig0022984:81881-81900 Msa1403930:CDS 40.0%
TTAAGGATTCCCACCTGTTT+AGG + tig0022984:81935-81954 Msa1403930:CDS 40.0%
!! CTTTTTCGTTTACAGGATGG+TGG + tig0022984:81987-82006 Msa1403930:CDS 40.0%
TGGTGGTAGTATTGTTCAGA+AGG + tig0022984:82004-82023 Msa1403930:CDS 40.0%
GGTGGTAGTATTGTTCAGAA+GGG + tig0022984:82005-82024 Msa1403930:CDS 40.0%
AGCAATAAATCGTCTGTTGG+TGG - tig0022984:82141-82160 None:intergenic 40.0%
CAGCATGGATGATATCCTTA+CGG + tig0022984:82218-82237 Msa1403930:CDS 40.0%
GATATCCTTACGGAATGCAA+TGG + tig0022984:82228-82247 Msa1403930:CDS 40.0%
!! GCAGTGCTTATTTTCAGACA+CGG - tig0022984:82429-82448 None:intergenic 40.0%
! AAAATAAGCACTGCAAAGCC+TGG + tig0022984:82435-82454 Msa1403930:three_prime_UTR 40.0%
! AAATAAGCACTGCAAAGCCT+GGG + tig0022984:82436-82455 Msa1403930:three_prime_UTR 40.0%
CGATAGTGTTGTGGCTTAAA+AGG + tig0022984:82521-82540 Msa1403930:three_prime_UTR 40.0%
! ACCCATTTCGTACACCTTTT+CGG + tig0022984:82652-82671 Msa1403930:three_prime_UTR 40.0%
! ACCGAAAAGGTGTACGAAAT+GGG - tig0022984:82656-82675 None:intergenic 40.0%
! AAGTGTTGTACTCACCGAAA+AGG - tig0022984:82669-82688 None:intergenic 40.0%
! TCGGCATCTTTAAGAGTCAA+AGG - tig0022984:82789-82808 None:intergenic 40.0%
GACTGAGTAAGCATATCAAG+TGG + tig0022984:82807-82826 Msa1403930:three_prime_UTR 40.0%
GAAACGAAGAACAATCGTGG+AGG + tig0022984:78212-78231 Msa1403930:five_prime_UTR 45.0%
AACGAAGAACAATCGTGGAG+GGG + tig0022984:78214-78233 Msa1403930:five_prime_UTR 45.0%
GTTAGTGGAAAGGAACATGG+AGG - tig0022984:78264-78283 None:intergenic 45.0%
! TGGCGTTCAAGTTAGTGGAA+AGG - tig0022984:78274-78293 None:intergenic 45.0%
GAAGAATGGAGTTTGGCTGT+TGG - tig0022984:78294-78313 None:intergenic 45.0%
CAAACTCCATTCTTCTCCGA+CGG + tig0022984:78299-78318 Msa1403930:five_prime_UTR 45.0%
CATGAAAGAGAACTTGGCAG+CGG - tig0022984:78330-78349 None:intergenic 45.0%
CAAGTTCTCTTTCATGAGCG+CGG + tig0022984:78334-78353 Msa1403930:five_prime_UTR 45.0%
ATCGTGGATCCATTTGCGTT+CGG + tig0022984:78664-78683 Msa1403930:CDS 45.0%
CTTCCTGTTCATCCTCTGAT+CGG + tig0022984:78726-78745 Msa1403930:CDS 45.0%
! GTGTGTTGTTCTGAGTGTGT+AGG + tig0022984:78917-78936 Msa1403930:intron 45.0%
AAGGGGAAGAAGGGTTGAAA+AGG + tig0022984:79008-79027 Msa1403930:intron 45.0%
GTAGAAAGCCACAATTGGCT+TGG + tig0022984:79983-80002 Msa1403930:intron 45.0%
!!! TTTCTTTTTCGGCGTGACCA+CGG - tig0022984:80257-80276 None:intergenic 45.0%
GTGTCCTTTCTCCTCAACAA+TGG + tig0022984:80279-80298 Msa1403930:CDS 45.0%
GGAATTTCATTCCACGATCG+CGG - tig0022984:80334-80353 None:intergenic 45.0%
TTCCTGAAAAGAGTTCGCAG+CGG + tig0022984:80350-80369 Msa1403930:CDS 45.0%
! GAAGTTTGGCCTTTCCTACT+TGG + tig0022984:80489-80508 Msa1403930:CDS 45.0%
GCTTACACTCCAAGTAGGAA+AGG - tig0022984:80501-80520 None:intergenic 45.0%
! TTTGGTGCATCTAGGATGCA+TGG + tig0022984:80558-80577 Msa1403930:intron 45.0%
CAACTTAAAGCTCCCACTGT+TGG - tig0022984:81149-81168 None:intergenic 45.0%
CTTGCTGCATCTTCAGAACT+AGG - tig0022984:81235-81254 None:intergenic 45.0%
ATCTCCTTCCAACAGGGAAA+CGG - tig0022984:81320-81339 None:intergenic 45.0%
AGCATCATCTCCTTCCAACA+GGG - tig0022984:81326-81345 None:intergenic 45.0%
GTCAGTGGAATCTGTATCGA+GGG - tig0022984:81377-81396 None:intergenic 45.0%
AGTCAGTGGAATCTGTATCG+AGG - tig0022984:81378-81397 None:intergenic 45.0%
! CGATACAGATTCCACTGACT+CGG + tig0022984:81378-81397 Msa1403930:CDS 45.0%
AAATACCTCGGGACTTTCTG+AGG - tig0022984:81407-81426 None:intergenic 45.0%
TCTTCCAGACCATCATCAGA+AGG - tig0022984:81439-81458 None:intergenic 45.0%
TCTCCCTCACAAATGAAAGG+TGG + tig0022984:81493-81512 Msa1403930:CDS 45.0%
CTCCCTCACAAATGAAAGGT+GGG + tig0022984:81494-81513 Msa1403930:CDS 45.0%
GACCCACCTTTCATTTGTGA+GGG - tig0022984:81499-81518 None:intergenic 45.0%
TGACCCACCTTTCATTTGTG+AGG - tig0022984:81500-81519 None:intergenic 45.0%
TGGGTCAACACTACGAAGTA+GGG + tig0022984:81513-81532 Msa1403930:CDS 45.0%
AAGACTTTGCCACATGGCAA+CGG + tig0022984:81536-81555 Msa1403930:CDS 45.0%
GTATGGCATCCATTCTGCAT+TGG - tig0022984:81587-81606 None:intergenic 45.0%
! TCTGGAACAACAGCTTGAGA+GGG - tig0022984:81613-81632 None:intergenic 45.0%
!! TTCTGGAACAACAGCTTGAG+AGG - tig0022984:81614-81633 None:intergenic 45.0%
!! GCTGTTGGCTTGAAGGATTA+TGG + tig0022984:81658-81677 Msa1403930:CDS 45.0%
GATTATGGTCACCTAGATGC+TGG + tig0022984:81673-81692 Msa1403930:CDS 45.0%
GCACTATACGACCCTGAAAT+TGG + tig0022984:81742-81761 Msa1403930:CDS 45.0%
ATAACAGATCGCTCATACCC+TGG - tig0022984:81774-81793 None:intergenic 45.0%
!! GAGGCATTCTGGTGTTTTGT+TGG + tig0022984:81826-81845 Msa1403930:CDS 45.0%
AAAAGGCCAGGCAGAATTTC+AGG + tig0022984:81857-81876 Msa1403930:CDS 45.0%
ATCAAGCCTGAAATTCTGCC+TGG - tig0022984:81866-81885 None:intergenic 45.0%
GCAGAATTTCAGGCTTGATG+AGG + tig0022984:81867-81886 Msa1403930:CDS 45.0%
GAATTTCAGGCTTGATGAGG+TGG + tig0022984:81870-81889 Msa1403930:CDS 45.0%
TTCCCACCTGTTTAGGCATT+TGG + tig0022984:81942-81961 Msa1403930:CDS 45.0%
CTCCAAATGCCTAAACAGGT+GGG - tig0022984:81947-81966 None:intergenic 45.0%
TCTCCAAATGCCTAAACAGG+TGG - tig0022984:81948-81967 None:intergenic 45.0%
GCTTCTCCAAATGCCTAAAC+AGG - tig0022984:81951-81970 None:intergenic 45.0%
TTGAACAGACTCTCTGCCTT+TGG + tig0022984:82037-82056 Msa1403930:CDS 45.0%
TGAACAGACTCTCTGCCTTT+GGG + tig0022984:82038-82057 Msa1403930:CDS 45.0%
! TCTGCCTTTGGGAAGTAATG+TGG + tig0022984:82049-82068 Msa1403930:CDS 45.0%
! CTGCCTTTGGGAAGTAATGT+GGG + tig0022984:82050-82069 Msa1403930:CDS 45.0%
CAGCAATCAGAGCTGGTATA+GGG + tig0022984:82082-82101 Msa1403930:CDS 45.0%
AATCTGCCTGGAGCAGAATT+AGG + tig0022984:82106-82125 Msa1403930:CDS 45.0%
CAGCCTCAGTGTTACAAAGA+AGG + tig0022984:82172-82191 Msa1403930:CDS 45.0%
CCATGCTGCTATACTTCTCA+AGG - tig0022984:82206-82225 None:intergenic 45.0%
! CCTTGAGAAGTATAGCAGCA+TGG + tig0022984:82203-82222 Msa1403930:CDS 45.0%
CCAGAAGCTTCCAAACATCA+AGG - tig0022984:82266-82285 None:intergenic 45.0%
CCTTGATGTTTGGAAGCTTC+TGG + tig0022984:82263-82282 Msa1403930:CDS 45.0%
TCTGGATGATGCCCATAACT+TGG + tig0022984:82281-82300 Msa1403930:CDS 45.0%
AAGGGTGACCACCAAGTTAT+GGG - tig0022984:82295-82314 None:intergenic 45.0%
TACGTATCAACTGCGGTCAT+TGG - tig0022984:82347-82366 None:intergenic 45.0%
GATCTTTACTTACAGGCTGC+TGG + tig0022984:82394-82413 Msa1403930:three_prime_UTR 45.0%
!! GTGCTTATTTTCAGACACGG+AGG - tig0022984:82426-82445 None:intergenic 45.0%
! CACCGAAAAGGTGTACGAAA+TGG - tig0022984:82657-82676 None:intergenic 45.0%
TGTCTCTCTCCCACTACGAA+GGG - tig0022984:78039-78058 None:intergenic 50.0%
TTGTCTCTCTCCCACTACGA+AGG - tig0022984:78040-78059 None:intergenic 50.0%
TGGAAAGGAACATGGAGGAG+AGG - tig0022984:78259-78278 None:intergenic 50.0%
! GCTGTTGGCGTTCAAGTTAG+TGG - tig0022984:78279-78298 None:intergenic 50.0%
CGTCGGAGAAGAATGGAGTT+TGG - tig0022984:78301-78320 None:intergenic 50.0%
CGCGCTCATGAAAGAGAACT+TGG - tig0022984:78336-78355 None:intergenic 50.0%
TCAGAGGATGAACAGGAAGC+TGG - tig0022984:78725-78744 None:intergenic 50.0%
TCACCGATCAGAGGATGAAC+AGG - tig0022984:78732-78751 None:intergenic 50.0%
ACACTTGCCCAAGCCAATTG+TGG - tig0022984:79994-80013 None:intergenic 50.0%
GAGGTCGTCTTAAATCACCG+TGG + tig0022984:80237-80256 Msa1403930:intron 50.0%
! AAAAGCTTGTTTGCCCCCGA+CGG + tig0022984:80302-80321 Msa1403930:CDS 50.0%
CCAGAGAATCCCTTTCCAGT+GGG + tig0022984:81257-81276 Msa1403930:CDS 50.0%
CAGAGAATCCCTTTCCAGTG+GGG + tig0022984:81258-81277 Msa1403930:CDS 50.0%
TGATCCATCCGTTTCCCTGT+TGG + tig0022984:81309-81328 Msa1403930:CDS 50.0%
GAGCATCATCTCCTTCCAAC+AGG - tig0022984:81327-81346 None:intergenic 50.0%
! TTCTGAGGAATCCGAGTCAG+TGG - tig0022984:81392-81411 None:intergenic 50.0%
GTGGGTCAACACTACGAAGT+AGG + tig0022984:81512-81531 Msa1403930:CDS 50.0%
GTAGGGAAGACTTTGCCACA+TGG + tig0022984:81530-81549 Msa1403930:CDS 50.0%
TGGCACGTACTGCATCAAGT+CGG - tig0022984:81567-81586 None:intergenic 50.0%
CAGTACGTGCCAATGCAGAA+TGG + tig0022984:81575-81594 Msa1403930:CDS 50.0%
ACAGCTTGAGAGGGAGAGTA+TGG - tig0022984:81604-81623 None:intergenic 50.0%
GATCGATGTGCCCTACTTTC+TGG - tig0022984:81631-81650 None:intergenic 50.0%
CCTGGCAGTAGCCAATTTCA+GGG - tig0022984:81756-81775 None:intergenic 50.0%
CCTGAAATTGGCTACTGCCA+GGG + tig0022984:81754-81773 Msa1403930:CDS 50.0%
! CAGAAGATCACGAGGCATTC+TGG + tig0022984:81815-81834 Msa1403930:CDS 50.0%
TAGGCATTTGGAGAAGCTCC+AGG + tig0022984:81954-81973 Msa1403930:CDS 50.0%
CTGCCCACATTACTTCCCAA+AGG - tig0022984:82056-82075 None:intergenic 50.0%
GATCAAGCAGCAATCAGAGC+TGG + tig0022984:82075-82094 Msa1403930:CDS 50.0%
GCAGCAATCAGAGCTGGTAT+AGG + tig0022984:82081-82100 Msa1403930:CDS 50.0%
CTGGTATAGGGAAATCTGCC+TGG + tig0022984:82094-82113 Msa1403930:CDS 50.0%
CCATGCCATTGCATTCCGTA+AGG - tig0022984:82236-82255 None:intergenic 50.0%
CCTTACGGAATGCAATGGCA+TGG + tig0022984:82233-82252 Msa1403930:CDS 50.0%
TGGCAGGACACCTTGATGTT+TGG + tig0022984:82253-82272 Msa1403930:CDS 50.0%
GGATGATGCCCATAACTTGG+TGG + tig0022984:82284-82303 Msa1403930:CDS 50.0%
GAAGGGTGACCACCAAGTTA+TGG - tig0022984:82296-82315 None:intergenic 50.0%
GAAAGAGAACTTGGCAGCGG+CGG - tig0022984:78327-78346 None:intergenic 55.0%
GTTCTCTTTCATGAGCGCGG+TGG + tig0022984:78337-78356 Msa1403930:five_prime_UTR 55.0%
!! GTGAAAAGCACCGCCGTAGT+CGG - tig0022984:78371-78390 None:intergenic 55.0%
! TACGGCGGTGCTTTTCACGA+CGG + tig0022984:78373-78392 Msa1403930:five_prime_UTR 55.0%
CTCGTCGCCGTCTTCTTCTA+TGG + tig0022984:78410-78429 Msa1403930:five_prime_UTR 55.0%
GGATGAACAGGAAGCTGGTG+AGG - tig0022984:78720-78739 None:intergenic 55.0%
! AAAGCTTGTTTGCCCCCGAC+GGG + tig0022984:80303-80322 Msa1403930:CDS 55.0%
! CTCCGCTGCGAACTCTTTTC+AGG - tig0022984:80355-80374 None:intergenic 55.0%
GCAGTTGTCGGCATTGTCTG+CGG - tig0022984:81120-81139 None:intergenic 55.0%
GCCAGAGAATCCCTTTCCAG+TGG + tig0022984:81256-81275 Msa1403930:CDS 55.0%
CCCACTGGAAAGGGATTCTC+TGG - tig0022984:81260-81279 None:intergenic 55.0%
GCTCTGTTCCCCACTGGAAA+GGG - tig0022984:81269-81288 None:intergenic 55.0%
CCTTCCAACAGGGAAACGGA+TGG - tig0022984:81316-81335 None:intergenic 55.0%
CCATCCGTTTCCCTGTTGGA+AGG + tig0022984:81313-81332 Msa1403930:CDS 55.0%
GGAATCTGTATCGAGGGCAG+AGG - tig0022984:81371-81390 None:intergenic 55.0%
GGATTCCTCAGAAAGTCCCG+AGG + tig0022984:81399-81418 Msa1403930:CDS 55.0%
TCGGATGATCCGTTGCCATG+TGG - tig0022984:81548-81567 None:intergenic 55.0%
TAGGGCACATCGATCTGCTG+AGG + tig0022984:81636-81655 Msa1403930:CDS 55.0%
CATCGATCTGCTGAGGCTGT+TGG + tig0022984:81643-81662 Msa1403930:CDS 55.0%
!! TGCTGAGGCTGTTGGCTTGA+AGG + tig0022984:81651-81670 Msa1403930:CDS 55.0%
CCCTGAAATTGGCTACTGCC+AGG + tig0022984:81753-81772 Msa1403930:CDS 55.0%
CCCTGGCAGTAGCCAATTTC+AGG - tig0022984:81757-81776 None:intergenic 55.0%
CGAAAAAGCAATCCTCGGCC+TGG - tig0022984:81975-81994 None:intergenic 55.0%
ACGCTGCCTAATTCTGCTCC+AGG - tig0022984:82115-82134 None:intergenic 55.0%
ACGGAATGCAATGGCATGGC+AGG + tig0022984:82237-82256 Msa1403930:CDS 55.0%
! GTGCTTTTCACGACGGTGGC+CGG + tig0022984:78380-78399 Msa1403930:five_prime_UTR 60.0%
ACGATCGCGGATTCTCCCGT+CGG - tig0022984:80321-80340 None:intergenic 60.0%
GGCTCTGTTCCCCACTGGAA+AGG - tig0022984:81270-81289 None:intergenic 60.0%
ATCTGGGCTCTGTTCCCCAC+TGG - tig0022984:81275-81294 None:intergenic 60.0%
GCATCAGCGTTGCTGCTGCT+GGG - tig0022984:81349-81368 None:intergenic 60.0%
TTTGGAGAAGCTCCAGGCCG+AGG + tig0022984:81960-81979 Msa1403930:CDS 60.0%
GGTGGCCACCTCTCCGACTA+CGG + tig0022984:78355-78374 Msa1403930:five_prime_UTR 65.0%
! AAGCACCGCCGTAGTCGGAG+AGG - tig0022984:78366-78385 None:intergenic 65.0%
! GGCGGTGCTTTTCACGACGG+TGG + tig0022984:78376-78395 Msa1403930:five_prime_UTR 65.0%
ATCGCGGATTCTCCCGTCGG+GGG - tig0022984:80318-80337 None:intergenic 65.0%
GATCGCGGATTCTCCCGTCG+GGG - tig0022984:80319-80338 None:intergenic 65.0%
CGATCGCGGATTCTCCCGTC+GGG - tig0022984:80320-80339 None:intergenic 65.0%
GACGGGAGAATCCGCGATCG+TGG + tig0022984:80320-80339 Msa1403930:CDS 65.0%
GGCATCAGCGTTGCTGCTGC+TGG - tig0022984:81350-81369 None:intergenic 65.0%
GCGGCGCCGTCGGAGAAGAA+TGG - tig0022984:78308-78327 None:intergenic 70.0%
GGCCACCTCTCCGACTACGG+CGG + tig0022984:78358-78377 Msa1403930:five_prime_UTR 70.0%
CACCGCCGTAGTCGGAGAGG+TGG - tig0022984:78363-78382 None:intergenic 70.0%
GACGGCGACGAGAGCGATGC+CGG - tig0022984:78402-78421 None:intergenic 70.0%
! CTTGGCAGCGGCGGCGCCGT+CGG - tig0022984:78318-78337 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0022984 gene 78013 82831 78013 ID=Msa1403930;Name=Msa1403930
tig0022984 mRNA 78013 82831 78013 ID=Msa1403930-mRNA-1;Parent=Msa1403930;Name=Msa1403930-mRNA-1;_AED=0.06;_eAED=0.06;_QI=571|1|1|1|1|1|5|481|551
tig0022984 exon 78013 78747 78013 ID=Msa1403930-mRNA-1:exon:19507;Parent=Msa1403930-mRNA-1
tig0022984 exon 80238 80373 80238 ID=Msa1403930-mRNA-1:exon:19508;Parent=Msa1403930-mRNA-1
tig0022984 exon 80465 80514 80465 ID=Msa1403930-mRNA-1:exon:19509;Parent=Msa1403930-mRNA-1
tig0022984 exon 80907 80960 80907 ID=Msa1403930-mRNA-1:exon:19510;Parent=Msa1403930-mRNA-1
tig0022984 exon 81099 82831 81099 ID=Msa1403930-mRNA-1:exon:19511;Parent=Msa1403930-mRNA-1
tig0022984 five_prime_UTR 78013 78583 78013 ID=Msa1403930-mRNA-1:five_prime_utr;Parent=Msa1403930-mRNA-1
tig0022984 CDS 78584 78747 78584 ID=Msa1403930-mRNA-1:cds;Parent=Msa1403930-mRNA-1
tig0022984 CDS 80238 80373 80238 ID=Msa1403930-mRNA-1:cds;Parent=Msa1403930-mRNA-1
tig0022984 CDS 80465 80514 80465 ID=Msa1403930-mRNA-1:cds;Parent=Msa1403930-mRNA-1
tig0022984 CDS 80907 80960 80907 ID=Msa1403930-mRNA-1:cds;Parent=Msa1403930-mRNA-1
tig0022984 CDS 81099 82350 81099 ID=Msa1403930-mRNA-1:cds;Parent=Msa1403930-mRNA-1
tig0022984 three_prime_UTR 82351 82831 82351 ID=Msa1403930-mRNA-1:three_prime_utr;Parent=Msa1403930-mRNA-1
Gene Sequence

>Msa1403930

ATGAATCCTCTTAGAAGAAGTAACAATTCATCTTCATCATCTTCAAATAATTCATCTCCTTCTTCATCATCATCGAATTCATCGTGGATCCATTTGCGTTCGGTTTTATTCGTTGTTACTTCTTCTTCTTCTTCCTCACCAGCTTCCTGTTCATCCTCTGATCGAGGTCGTCTTAAATCACCGTGGTCACGCCGAAAAAGAAAACGTGTCCTTTCTCCTCAACAATGGAAAAGCTTGTTTGCCCCCGACGGGAGAATCCGCGATCGTGGAATGAAATTCCTGAAAAGAGTTCGCAGCGGAGGTGTTGATCCTAGTATCAGAGCTGAAGTTTGGCCTTTCCTACTTGGAGTATATGATTTAGATACTACCAAACAAGAAAGAGATGTTATACGAACTCAAAATAGAAAGAAGTATGAGAAACTCCGCAGACAATGCCGACAACTGCTAAAATCCAACAGTGGGAGCTTTAAGTTGATTGACATAGGTGAAGTCAACTATGAAGGAGATGGTGTGAGTTTTATTCAAGATTCTGGTTCTCCTAGTTCTGAAGATGCAGCAAGTGCCAGAGAATCCCTTTCCAGTGGGGAACAGAGCCCAGATTTTGAATATTCAGATGATCCATCCGTTTCCCTGTTGGAAGGAGATGATGCTCCCAGCAGCAGCAACGCTGATGCCTCTGCCCTCGATACAGATTCCACTGACTCGGATTCCTCAGAAAGTCCCGAGGTATTTCAGACATTTCCTTCTGATGATGGTCTGGAAGAGAACAATGCCAAGACAACTTCTAAGGATAGTTCTTCTCCCTCACAAATGAAAGGTGGGTCAACACTACGAAGTAGGGAAGACTTTGCCACATGGCAACGGATCATCCGACTTGATGCAGTACGTGCCAATGCAGAATGGATGCCATACTCTCCCTCTCAAGCTGTTGTTCCAGAAAGTAGGGCACATCGATCTGCTGAGGCTGTTGGCTTGAAGGATTATGGTCACCTAGATGCTGGCAGAATTTTTCATGCTGCTAGATTGGTTGCTATTCTTGAAGCATATGCACTATACGACCCTGAAATTGGCTACTGCCAGGGTATGAGCGATCTGTTATCTCCTATAATTAGTGTTGTATCAGAAGATCACGAGGCATTCTGGTGTTTTGTTGGATTTATGAAAAAGGCCAGGCAGAATTTCAGGCTTGATGAGGTGGGTATTAGAAGGCAACTTGATATAGTTGCAAAAATAATCAAGTTTAAGGATTCCCACCTGTTTAGGCATTTGGAGAAGCTCCAGGCCGAGGATTGCTTTTTCGTTTACAGGATGGTGGTAGTATTGTTCAGAAGGGAGTTGACATTTGAACAGACTCTCTGCCTTTGGGAAGTAATGTGGGCAGATCAAGCAGCAATCAGAGCTGGTATAGGGAAATCTGCCTGGAGCAGAATTAGGCAGCGTGCTCCACCAACAGACGATTTATTGCTTTTTGCAATAGCAGCCTCAGTGTTACAAAGAAGGAAATTGATCCTTGAGAAGTATAGCAGCATGGATGATATCCTTACGGAATGCAATGGCATGGCAGGACACCTTGATGTTTGGAAGCTTCTGGATGATGCCCATAACTTGGTGGTCACCCTTCATGATAAAATGAAGATAGAAGCATCATTCCAATGA
Protein sequence

>Msa1403930

MNPLRRSNNSSSSSSNNSSPSSSSSNSSWIHLRSVLFVVTSSSSSSPASCSSSDRGRLKSPWSRRKRKRVLSPQQWKSLFAPDGRIRDRGMKFLKRVRSGGVDPSIRAEVWPFLLGVYDLDTTKQERDVIRTQNRKKYEKLRRQCRQLLKSNSGSFKLIDIGEVNYEGDGVSFIQDSGSPSSEDAASARESLSSGEQSPDFEYSDDPSVSLLEGDDAPSSSNADASALDTDSTDSDSSESPEVFQTFPSDDGLEENNAKTTSKDSSSPSQMKGGSTLRSREDFATWQRIIRLDAVRANAEWMPYSPSQAVVPESRAHRSAEAVGLKDYGHLDAGRIFHAARLVAILEAYALYDPEIGYCQGMSDLLSPIISVVSEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDIVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWADQAAIRAGIGKSAWSRIRQRAPPTDDLLLFAIAASVLQRRKLILEKYSSMDDILTECNGMAGHLDVWKLLDDAHNLVVTLHDKMKIEASFQ*