AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0607340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0607340 MtrunA17_Chr4g0038901 97.074 752 12 1 1 752 1 742 0.0 1489
Msa0607340 MtrunA17_Chr3g0137321 85.934 455 30 2 739 1160 25 478 0.0 784
Msa0607340 MtrunA17_Chr3g0137261 88.571 455 18 2 739 1160 27 480 0.0 780
Msa0607340 MtrunA17_Chr3g0137341 86.813 455 22 2 739 1160 25 474 0.0 767
Msa0607340 MtrunA17_Chr1g0192071 85.275 455 25 2 739 1160 27 472 0.0 744
Msa0607340 MtrunA17_Chr3g0137271 85.022 454 30 2 739 1159 25 473 0.0 722
Msa0607340 MtrunA17_Chr1g0186201 83.736 455 36 2 739 1160 25 474 0.0 717
Msa0607340 MtrunA17_Chr1g0212211 67.387 509 75 8 739 1160 25 529 0.0 617
Msa0607340 MtrunA17_Chr8g0364981 84.131 397 39 5 766 1146 1 389 0.0 600
Msa0607340 MtrunA17_Chr3g0137301 95.361 194 8 1 966 1159 1 193 6.82e-123 375
Msa0607340 MtrunA17_Chr1g0184981 88.718 195 18 1 966 1160 1 191 5.39e-116 357
Msa0607340 MtrunA17_Chr1g0184991 77.679 224 17 1 739 929 25 248 3.48e-113 352
Msa0607340 MtrunA17_Chr3g0139471 33.425 724 407 16 12 679 18 722 9.84e-108 358
Msa0607340 MtrunA17_Chr3g0137311 95.699 93 4 0 739 831 43 135 2.95e-56 191
Msa0607340 MtrunA17_Chr5g0435291 34.375 224 124 4 24 243 41 245 4.08e-29 126
Msa0607340 MtrunA17_Chr5g0435291 29.697 330 201 7 238 547 322 640 9.63e-23 105
Msa0607340 MtrunA17_Chr4g0002381 21.218 476 312 12 19 466 21 461 2.72e-15 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0607340 AT4G23460.1 88.165 752 68 4 1 748 1 735 0.0 1317
Msa0607340 AT4G11380.1 88.117 749 75 3 1 748 1 736 0.0 1285
Msa0607340 AT4G11380.2 85.603 771 75 4 1 748 1 758 0.0 1271
Msa0607340 AT4G23460.2 88.099 647 66 3 106 748 2 641 0.0 1140
Msa0607340 AT5G25260.1 67.478 452 99 4 739 1156 25 462 0.0 612
Msa0607340 AT5G25250.1 67.111 450 100 3 739 1155 25 459 0.0 604
Msa0607340 AT5G64870.1 63.333 450 120 3 739 1155 26 463 0.0 540
Msa0607340 AT5G11490.1 35.430 604 354 13 12 595 17 604 1.65e-103 347
Msa0607340 AT5G11490.2 35.430 604 354 13 12 595 17 604 4.96e-103 345
Msa0607340 AT5G11490.3 35.866 566 334 12 43 595 1 550 2.19e-98 331
Msa0607340 AT3G55480.2 36.199 221 124 4 24 243 41 245 4.84e-28 123
Msa0607340 AT3G55480.2 27.576 330 207 9 251 558 339 658 4.31e-22 103
Msa0607340 AT3G55480.1 27.576 330 207 9 251 558 211 530 3.77e-22 103

Find 287 sgRNAs with CRISPR-Local

Find 699 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGAGTATTTCTCATATT+TGG 0.101480 4_2:+54146424 Msa0607340:CDS
CACTAGTCGTTTATTTGTTT+TGG 0.135044 4_2:+54147830 Msa0607340:three_prime_UTR
AGCTGCTCTCTCTAATTTAA+TGG 0.158134 4_2:-54142970 None:intergenic
CAAATGTGTTCTTGTTAAAT+TGG 0.165232 4_2:-54145771 None:intergenic
TTGCATGCAAACAGAAAATT+TGG 0.170636 4_2:+54139664 Msa0607340:CDS
CGAGCTTCTTGAAAGTTTCT+TGG 0.175476 4_2:+54143409 Msa0607340:CDS
GACCAGCCAGCTGCTCCTTC+AGG 0.234375 4_2:+54144809 Msa0607340:CDS
CTCACAAAGAGTTGCAATTA+TGG 0.248644 4_2:-54143217 None:intergenic
TTGAGCCTAAGATTAGTATT+TGG 0.251063 4_2:+54147546 Msa0607340:CDS
AATTCTTGCACATGAAATTA+AGG 0.258946 4_2:+54142098 Msa0607340:CDS
TGGACTAGCGCAGGTTCTTC+AGG 0.274192 4_2:-54143440 None:intergenic
TGATCCTATCTATGTGAAAA+TGG 0.279856 4_2:+54142261 Msa0607340:CDS
ACATTTGGTCTTGCAGCTGC+TGG 0.280676 4_2:+54145787 Msa0607340:CDS
CATGAGTATTTCTCATATTT+GGG 0.284347 4_2:+54146425 Msa0607340:CDS
CGAAGAAGGCCGTGGCTCTA+AGG 0.294288 4_2:+54146753 Msa0607340:CDS
AATTCTCAAGTTCCACTTGA+TGG 0.296428 4_2:+54145739 Msa0607340:CDS
TTAAGCTCTTCTTTGAGTTC+AGG 0.296920 4_2:-54138281 None:intergenic
ACAGCTAAGGCACGAATTAA+AGG 0.297318 4_2:-54140059 None:intergenic
AAGGCACGAATTAAAGGATT+TGG 0.302488 4_2:-54140053 None:intergenic
TGTATCGATCACATAATAAA+AGG 0.308366 4_2:-54147798 None:intergenic
TGCGGCACTCGCTGAAATTC+AGG 0.309014 4_2:+54140444 Msa0607340:CDS
GCATCAATGATCTGGATAAT+TGG 0.309591 4_2:+54143356 Msa0607340:CDS
AGCTTACCTGGTCTATATTT+CGG 0.310084 4_2:-54142318 None:intergenic
GTCAACCCTAGCTTGATTCT+TGG 0.318930 4_2:-54146468 None:intergenic
GCTAAGATGAAAGGTGAAAT+TGG 0.319472 4_2:+54146500 Msa0607340:CDS
GGCCCTCAGTTGGCTTCTTA+AGG 0.329378 4_2:-54143496 None:intergenic
GGGCCCACAGCAGATGATTC+AGG 0.341638 4_2:+54143514 Msa0607340:CDS
ATCAGGATGATGCAAGTATT+AGG 0.343351 4_2:+54147736 Msa0607340:exon
TGCAGCTGCTGGGCCCCTGC+AGG 0.346760 4_2:+54145798 Msa0607340:CDS
AGGGATTACTTGATGATAAA+TGG 0.347159 4_2:+54147473 Msa0607340:CDS
CTCCCCGCTGTCTTCACAAT+TGG 0.348065 4_2:+54146134 Msa0607340:CDS
CATGTTGCCTCCTGCTTGGA+TGG 0.350630 4_2:+54147688 Msa0607340:CDS
ACTTCGAATGTGTAGTTTAC+CGG 0.360846 4_2:-54146077 None:intergenic
AAATCAGTGCACAGCTTACT+AGG 0.371520 4_2:+54145677 Msa0607340:CDS
ACTGCCTGCTTCAACTGGTC+AGG 0.372776 4_2:+54145648 Msa0607340:CDS
AGAAAGGCTGTTCGTGCAAT+TGG 0.378274 4_2:+54142939 Msa0607340:CDS
CAATTTAACAAGAACACATT+TGG 0.378772 4_2:+54145772 Msa0607340:CDS
GTGCGGGTAACAAATGCTTC+AGG 0.379627 4_2:-54144569 None:intergenic
GTGAAATTGGTTCAAAATTG+AGG 0.384625 4_2:+54146513 Msa0607340:CDS
TTAGTCCAAATACTAATCTT+AGG 0.384650 4_2:-54147551 None:intergenic
AGAGCTATACGCAAAGAAAA+AGG 0.384802 4_2:+54147361 Msa0607340:CDS
AAGATTAGTATTTGGACTAA+TGG 0.384982 4_2:+54147554 Msa0607340:CDS
ATAGTAGTGGTACTTGGTTT+TGG 0.385485 4_2:+54147762 Msa0607340:three_prime_UTR
ATCAAATCACCAAGTAAATC+TGG 0.390549 4_2:-54144755 None:intergenic
GAAAGAAAACAATACGTGTT+GGG 0.396780 4_2:-54143092 None:intergenic
ACCAGCCAGCTGCTCCTTCA+GGG 0.397538 4_2:+54144810 Msa0607340:CDS
TCGATTCAAATGTCAATGTC+TGG 0.397573 4_2:-54138184 None:intergenic
CGACAGTACAACTGCACAAT+TGG 0.398220 4_2:-54141786 None:intergenic
TGTAGGTACAAGAAGCAAAC+TGG 0.406248 4_2:+54147219 Msa0607340:intron
TGGTCCTCGTGTTGACGATC+AGG 0.407219 4_2:+54146154 Msa0607340:CDS
AGATTTACTTGGTGATTTGA+TGG 0.408236 4_2:+54144757 Msa0607340:CDS
TATGCACGATCTCGCAAATC+AGG 0.410180 4_2:-54144100 None:intergenic
TGTTACCCGCACACTTGCTT+CGG 0.411432 4_2:+54144580 Msa0607340:CDS
GGCTTGGACCAAGGCGGCTC+AGG 0.413477 4_2:+54146715 Msa0607340:CDS
TAAGCTCTTCTTTGAGTTCA+GGG 0.415409 4_2:-54138280 None:intergenic
GAGATCGTGCATACATATAT+TGG 0.416999 4_2:+54144110 Msa0607340:CDS
ATCATGAGGTGAAATAAGTT+TGG 0.419407 4_2:-54146195 None:intergenic
ATTTCATGTGCAAGAATTGT+CGG 0.420714 4_2:-54142093 None:intergenic
CTGGACAGGCATCAATGATC+TGG 0.425383 4_2:+54143348 Msa0607340:intron
GCCTTAGCTGTGCGAACAAT+GGG 0.427730 4_2:+54140071 Msa0607340:CDS
ATCTGCTGTGGGCCCTCAGT+TGG 0.429553 4_2:-54143506 None:intergenic
TTCAGCCACCTGAGCCGCCT+TGG 0.429757 4_2:-54146723 None:intergenic
AGTTGTACTGTCGGCTGTTA+AGG 0.429858 4_2:+54141796 Msa0607340:CDS
GTTGTACTGCCTGCTTCAAC+TGG 0.430164 4_2:+54145643 Msa0607340:CDS
GCTGCTGTCTTGCGAACATA+TGG 0.433079 4_2:-54140304 None:intergenic
TGAAATTGGTTCAAAATTGA+GGG 0.433449 4_2:+54146514 Msa0607340:CDS
TCTGACAAAAGCTCTTAATC+AGG 0.437343 4_2:+54147719 Msa0607340:exon
TCATCTGTAAATCCTGCTAA+TGG 0.446043 4_2:+54144650 Msa0607340:CDS
CTTCGTGGTGGAGAAGTACT+TGG 0.446421 4_2:-54138246 None:intergenic
GGCTGAAGTTGAGGCGAAGA+AGG 0.448460 4_2:+54146739 Msa0607340:CDS
AAAACATATACCTTGGCTTC+GGG 0.448572 4_2:-54143261 None:intergenic
GAAAACATATACCTTGGCTT+CGG 0.450521 4_2:-54143262 None:intergenic
CATTTGGTCTTGCAGCTGCT+GGG 0.453532 4_2:+54145788 Msa0607340:CDS
GTTGAAGCAGGCAGTACAAC+GGG 0.454683 4_2:-54145640 None:intergenic
CGGTCAATCCTGCACCGTCT+TGG 0.457748 4_2:+54146046 Msa0607340:CDS
GTAGATGATCCTTCAACAAA+TGG 0.459935 4_2:+54141936 Msa0607340:intron
GCACCTTTAGACATCTTTGA+AGG 0.459959 4_2:-54140136 None:intergenic
AACGAGTTCATTAACGTGGT+TGG 0.460140 4_2:-54146225 None:intergenic
GTAAATCCTGCTAATGGCCC+TGG 0.460366 4_2:+54144656 Msa0607340:CDS
AGATGCAGGTATTGTATAGC+TGG 0.467714 4_2:-54144693 None:intergenic
CAAGACGGTGCAGGATTGAC+CGG 0.470050 4_2:-54146045 None:intergenic
CACGTTAATGAACTCGTTCA+AGG 0.472122 4_2:+54146230 Msa0607340:CDS
GCGGAAGGAATTGCGACACT+TGG 0.472658 4_2:+54147386 Msa0607340:CDS
AGGGCAACATATTGTATCTC+AGG 0.473365 4_2:-54142039 None:intergenic
TAGCAATTGGTGGATGTGCC+TGG 0.473950 4_2:+54146401 Msa0607340:intron
TTGGACCAAGGCGGCTCAGG+TGG 0.476684 4_2:+54146718 Msa0607340:CDS
GATTTACTTGGTGATTTGAT+GGG 0.477092 4_2:+54144758 Msa0607340:CDS
GAAGCTGGTGCCACAGATGC+AGG 0.477195 4_2:-54144707 None:intergenic
ACCCTGAAGGAGCAGCTGGC+TGG 0.481300 4_2:-54144811 None:intergenic
CGCAGTAAATACATTTGTAA+AGG 0.483737 4_2:+54139754 Msa0607340:CDS
GTACTTCTCCACCACGAAGA+AGG 0.486120 4_2:+54138250 Msa0607340:CDS
AGGTTTATAGTAGTGGTACT+TGG 0.488283 4_2:+54147756 Msa0607340:three_prime_UTR
AACAACCATTGGATTATTGT+CGG 0.490394 4_2:-54140410 None:intergenic
GAAACAACTACACAGCTGTA+AGG 0.490449 4_2:+54147453 Msa0607340:CDS
CGAGTATAGCAAGGTCCGGC+TGG 0.491866 4_2:-54139733 None:intergenic
AAGACTGTCCATGAGCAAAC+AGG 0.492575 4_2:+54147665 Msa0607340:CDS
GGACTAGCGCAGGTTCTTCA+GGG 0.498582 4_2:-54143439 None:intergenic
CTGCCTGCTTCAACTGGTCA+GGG 0.498842 4_2:+54145649 Msa0607340:CDS
GCACCAGTGCCAGATTTACT+TGG 0.499633 4_2:+54144746 Msa0607340:CDS
GAGGGCAGGAGAGGGTGACA+AGG 0.500083 4_2:+54146598 Msa0607340:CDS
GGACCAATTGTGAAGACAGC+GGG 0.501529 4_2:-54146137 None:intergenic
CACCTTTAGACATCTTTGAA+GGG 0.501807 4_2:-54140135 None:intergenic
GGTGACCCAGGGCCATTAGC+AGG 0.502483 4_2:-54144662 None:intergenic
ACTCACCCTGAAGGAGCAGC+TGG 0.503317 4_2:-54144815 None:intergenic
CAGGCATGTTGCCTCCTGCT+TGG 0.503335 4_2:+54147684 Msa0607340:CDS
CGATTCAAATGTCAATGTCT+GGG 0.503703 4_2:-54138183 None:intergenic
ATACAGCTTTGCAACACAAA+TGG 0.504157 4_2:-54140326 None:intergenic
TGCTTCCATGACGATGGAGG+AGG 0.505459 4_2:+54146283 Msa0607340:CDS
TGCGGGTAACAAATGCTTCA+GGG 0.508754 4_2:-54144568 None:intergenic
ATGCAGAGTTAGTTGAGGAC+AGG 0.508869 4_2:+54140356 Msa0607340:CDS
AGCAATTCTGTATGAGAAGA+AGG 0.509643 4_2:+54147271 Msa0607340:CDS
TCAATCTTATTGTACAAAGA+AGG 0.511281 4_2:+54142070 Msa0607340:CDS
CAATAAGATTGATATTTCGC+AGG 0.512583 4_2:-54142059 None:intergenic
ACAGCATTAGCAACAACCAT+TGG 0.514656 4_2:-54140421 None:intergenic
GCAGAAGGTGGAGGTGAAGC+TGG 0.515961 4_2:-54144722 None:intergenic
TGATGAGTTCCATTTGTTGA+AGG 0.516207 4_2:-54141945 None:intergenic
GACTCGGATTCACTTCCATC+AGG 0.516290 4_2:-54144629 None:intergenic
ATGACTAGTGATCTCAAAGA+TGG 0.516546 4_2:-54140482 None:intergenic
TAAGTTTGGCATATTTGAGA+AGG 0.518370 4_2:-54146181 None:intergenic
ATGTTGCCTCCTGCTTGGAT+GGG 0.519619 4_2:+54147689 Msa0607340:CDS
TGCAAATGTTTAGCAATTGG+TGG 0.520312 4_2:+54146391 Msa0607340:intron
AAGACAGCGGGGAGAACAAA+AGG 0.520506 4_2:-54146125 None:intergenic
TCACCAGCACTGATGTGGTC+CGG 0.520844 4_2:+54141965 Msa0607340:CDS
GCAACATGCCTGTTTGCTCA+TGG 0.521020 4_2:-54147673 None:intergenic
TGCCTTAGCTGTGCGAACAA+TGG 0.521875 4_2:+54140070 Msa0607340:CDS
CAATTGGCATGCTGTAACCG+TGG 0.521968 4_2:-54141770 None:intergenic
ATGAGAGAAAAGTCCTAAAA+CGG 0.522028 4_2:-54138126 None:intergenic
TTTGAGTCATCAGTTATCAC+AGG 0.523584 4_2:-54144473 None:intergenic
AGGGATTTCACCCTTCTTCG+TGG 0.524514 4_2:-54138261 None:intergenic
GAAGAAGGCCGTGGCTCTAA+GGG 0.526932 4_2:+54146754 Msa0607340:CDS
GAGAACAAAAGGAAGTTTCT+CGG 0.527868 4_2:-54146114 None:intergenic
TAGCTGTCAGCAATTGTAGT+TGG 0.528611 4_2:-54143460 None:intergenic
GGCAGGAGAGGGTGACAAGG+AGG 0.532326 4_2:+54146601 Msa0607340:CDS
ATTAGTATTTGGACTAATGG+TGG 0.532835 4_2:+54147557 Msa0607340:CDS
ACTTGGTGATTTGATGGGCA+TGG 0.533230 4_2:+54144763 Msa0607340:CDS
TCCCATTGTTCGCACAGCTA+AGG 0.534752 4_2:-54140072 None:intergenic
TGAGAGGTCCAAGACGGTGC+AGG 0.535402 4_2:-54146054 None:intergenic
ATTCCGGACCACATCAGTGC+TGG 0.535891 4_2:-54141968 None:intergenic
AGCAACTTCTTTCATAGCCA+TGG 0.536125 4_2:-54147612 None:intergenic
AGAGCTTAATTCTCAGTACA+AGG 0.537889 4_2:+54138295 Msa0607340:CDS
AGCAGGATTTACAGATGACT+CGG 0.538019 4_2:-54144645 None:intergenic
TACTTCTCCACCACGAAGAA+GGG 0.538973 4_2:+54138251 Msa0607340:CDS
CACCGTCTTGGACCTCTCAC+CGG 0.539796 4_2:+54146058 Msa0607340:CDS
AGAAGCTCGTCAAGTAGAGA+AGG 0.541367 4_2:-54144506 None:intergenic
CTAAGGGAAGCTGAGTTACA+AGG 0.541402 4_2:+54146770 Msa0607340:CDS
GGCTCAAGCTAATTCTGAGT+TGG 0.541784 4_2:+54146679 Msa0607340:CDS
ATTGTATAGCTGGAAGTAGG+AGG 0.543155 4_2:-54144683 None:intergenic
CTTGGCTTCGGGCTCATCCA+AGG 0.543269 4_2:-54143250 None:intergenic
GGCTCAGGTGGCTGAAGTTG+AGG 0.543832 4_2:+54146730 Msa0607340:CDS
TCCCCTTCAAAGATGTCTAA+AGG 0.544453 4_2:+54140133 Msa0607340:CDS
ACTAATGGTGGTGATAATAG+TGG 0.546356 4_2:+54147569 Msa0607340:CDS
GTTCATTAACGTGGTTGGAG+TGG 0.546435 4_2:-54146220 None:intergenic
GTGATTGCTGCTATGACGGT+TGG 0.547275 4_2:+54139605 Msa0607340:CDS
GGCAGTACAACGGGCAAAGG+AGG 0.547858 4_2:-54145631 None:intergenic
CAGTGCACAGCTTACTAGGC+GGG 0.548300 4_2:+54145681 Msa0607340:CDS
TGGAAGCCAAGAATCAAGCT+AGG 0.548842 4_2:+54146462 Msa0607340:CDS
CGCTGCTTCCATGACGATGG+AGG 0.549128 4_2:+54146280 Msa0607340:CDS
GATAAGGATCCCATCCAAGC+AGG 0.550974 4_2:-54147698 None:intergenic
TGCGATGCAGAGGGCAGGAG+AGG 0.552588 4_2:+54146589 Msa0607340:CDS
CTGGAAGTAGGAGGTGACCC+AGG 0.552629 4_2:-54144674 None:intergenic
GTTATTGCGATGCAGAGGGC+AGG 0.553673 4_2:+54146584 Msa0607340:CDS
AGTAAATTATGTGGTTCAAG+AGG 0.554444 4_2:+54143034 Msa0607340:CDS
TCTGGCACTGGTGCAGCAGA+AGG 0.554699 4_2:-54144737 None:intergenic
AATTGTAGTTGGACTAGCGC+AGG 0.556300 4_2:-54143449 None:intergenic
AATAAGATTGATATTTCGCA+GGG 0.557713 4_2:-54142058 None:intergenic
GCAGGCAGTACAACGGGCAA+AGG 0.558226 4_2:-54145634 None:intergenic
AAAATATACAGACAAAAGAA+TGG 0.558273 4_2:-54139792 None:intergenic
ACTGCGAGTATAGCAAGGTC+CGG 0.558284 4_2:-54139737 None:intergenic
TGCAGAGTTAGTTGAGGACA+GGG 0.558569 4_2:+54140357 Msa0607340:CDS
TTGTCTTCTCCAGGCAGCTA+AGG 0.559259 4_2:+54144430 Msa0607340:intron
CTGGGCCGAAGCAAGTGTGC+GGG 0.559342 4_2:-54144585 None:intergenic
GGCACTGGTGCAGCAGAAGG+TGG 0.559619 4_2:-54144734 None:intergenic
AAACCCTGACCAGTTGAAGC+AGG 0.559737 4_2:-54145652 None:intergenic
AAGTATTAGGTTTATAGTAG+TGG 0.560456 4_2:+54147749 Msa0607340:three_prime_UTR
AATTGGCATGCTGTAACCGT+GGG 0.561317 4_2:-54141769 None:intergenic
CGGAAGGAATTGCGACACTT+GGG 0.562902 4_2:+54147387 Msa0607340:CDS
ATTTGAATCGAGCAGAAGGA+AGG 0.563669 4_2:+54138196 Msa0607340:five_prime_UTR
GCAGGAGAGGGTGACAAGGA+GGG 0.564117 4_2:+54146602 Msa0607340:CDS
GGTATTGTATAGCTGGAAGT+AGG 0.565421 4_2:-54144686 None:intergenic
ATTGAACACTAGCTTTGCTA+AGG 0.566032 4_2:-54146847 None:intergenic
TTGTGAGAGCTTAGACACCT+TGG 0.567706 4_2:+54143233 Msa0607340:CDS
CTTGGATGAGCCCGAAGCCA+AGG 0.568294 4_2:+54143251 Msa0607340:CDS
GGAGCAGCTGGCTGGTCAAG+AGG 0.568350 4_2:-54144803 None:intergenic
CTCGTTCAAGGAATCATCGA+AGG 0.568467 4_2:+54146242 Msa0607340:CDS
TTCCTTAAGAAGCCAACTGA+GGG 0.569283 4_2:+54143494 Msa0607340:CDS
TCACCAAGTAAATCTGGCAC+TGG 0.569726 4_2:-54144749 None:intergenic
AGTACACTTCTCAATGCACT+TGG 0.570595 4_2:+54147431 Msa0607340:CDS
TAAATCCTGCTAATGGCCCT+GGG 0.570659 4_2:+54144657 Msa0607340:CDS
TCTGGGCCGAAGCAAGTGTG+CGG 0.572053 4_2:-54144586 None:intergenic
GAAGAAAGCGGCTTGGACCA+AGG 0.572319 4_2:+54146706 Msa0607340:CDS
GGCAGAAGCACAGAAAGCGT+CGG 0.572484 4_2:+54147298 Msa0607340:CDS
AGTTGAGGCGAAGAAGGCCG+TGG 0.572598 4_2:+54146745 Msa0607340:CDS
CAAGATAAAAGTAAATTATG+TGG 0.572985 4_2:+54143025 Msa0607340:CDS
GAAAACCTCCTCCATCGTCA+TGG 0.573319 4_2:-54146288 None:intergenic
AGGACCTGAATCATCTGCTG+TGG 0.575338 4_2:-54143518 None:intergenic
ATGGCTATGAAAGAAGTTGC+TGG 0.575925 4_2:+54147614 Msa0607340:CDS
GAGAGTAATGTCACAAGAGG+AGG 0.579273 4_2:-54142009 None:intergenic
ATTGGTTCAAAATTGAGGGA+AGG 0.580771 4_2:+54146518 Msa0607340:CDS
ACCTTTAGACATCTTTGAAG+GGG 0.581523 4_2:-54140134 None:intergenic
TGCTGCTATGACGGTTGGAA+AGG 0.583395 4_2:+54139610 Msa0607340:CDS
GCGACACTTGGGAATGCTCA+AGG 0.583461 4_2:+54147398 Msa0607340:CDS
GGACCTGAATCATCTGCTGT+GGG 0.583785 4_2:-54143517 None:intergenic
TGGCTAAGAAGAAAGCGGCT+TGG 0.585206 4_2:+54146699 Msa0607340:CDS
AAACAACTACACAGCTGTAA+GGG 0.585417 4_2:+54147454 Msa0607340:CDS
TGACATTTGAATCGAGCAGA+AGG 0.585625 4_2:+54138192 Msa0607340:five_prime_UTR
TGGATCATGAATCCATCAAG+TGG 0.585680 4_2:-54145751 None:intergenic
GTATGCAATATTAACCTGCA+GGG 0.586830 4_2:-54145812 None:intergenic
CTATACAATACCTGCATCTG+TGG 0.587131 4_2:+54144697 Msa0607340:CDS
CGAAGGTTATTGCGATGCAG+AGG 0.587186 4_2:+54146579 Msa0607340:CDS
GCGATGCAGAGGGCAGGAGA+GGG 0.587192 4_2:+54146590 Msa0607340:CDS
AAGACGGTGCAGGATTGACC+GGG 0.589066 4_2:-54146044 None:intergenic
GATATCCGACAATAATCCAA+TGG 0.589535 4_2:+54140405 Msa0607340:CDS
GAAGATGATGACTATCCTGA+TGG 0.589822 4_2:+54144614 Msa0607340:CDS
GAATCAAAGAGAGGCTGAAG+TGG 0.589954 4_2:+54146658 Msa0607340:CDS
GGTTGTTGCTAATGCTGTTG+CGG 0.590538 4_2:+54140426 Msa0607340:CDS
CCTCGCTGCTTCCATGACGA+TGG 0.591174 4_2:+54146277 Msa0607340:CDS
CTTGAACGAGTTCATTAACG+TGG 0.594211 4_2:-54146229 None:intergenic
AAAGAAAACAATACGTGTTG+GGG 0.594450 4_2:-54143091 None:intergenic
AAATTATGCAAAGAGCCAGC+CGG 0.594573 4_2:+54139718 Msa0607340:CDS
AAACCTCAGGGTCAGTTGAG+AGG 0.598260 4_2:-54144138 None:intergenic
CAAGGCTGCTGATGCACGTG+AGG 0.600260 4_2:+54141721 Msa0607340:CDS
TCTGTATGAGAAGAAGGCAG+AGG 0.600808 4_2:+54147277 Msa0607340:CDS
GGACGCTCTTTCTAGATACA+AGG 0.603895 4_2:+54141703 Msa0607340:CDS
ACTGGTGCAGCAGAAGGTGG+AGG 0.605496 4_2:-54144731 None:intergenic
GATTTCACCCTTCTTCGTGG+TGG 0.607571 4_2:-54138258 None:intergenic
AAAAGTGATTGCTGCTATGA+CGG 0.608991 4_2:+54139601 Msa0607340:CDS
AGTTACAAGGTGAAGTTGAG+AGG 0.609202 4_2:+54146783 Msa0607340:CDS
AGGGCGGAGCAAAGATGAGT+CGG 0.611860 4_2:+54138216 Msa0607340:exon
TGGAAGTAGGAGGTGACCCA+GGG 0.612011 4_2:-54144673 None:intergenic
TTTGGGTCAAAAGACGCAGA+TGG 0.613836 4_2:+54146442 Msa0607340:CDS
GTGTCAGAAGCTAAGATGAA+AGG 0.614706 4_2:+54146491 Msa0607340:CDS
TTTGAATCGAGCAGAAGGAA+GGG 0.614812 4_2:+54138197 Msa0607340:five_prime_UTR
GTAGGTACAAGAAGCAAACT+GGG 0.614898 4_2:+54147220 Msa0607340:intron
TGACTAGTGATCTCAAAGAT+GGG 0.615432 4_2:-54140481 None:intergenic
ACAAGGAGGGAATTAAAGTG+AGG 0.616761 4_2:+54146615 Msa0607340:CDS
ATGTGTAGTTTACCGGTGAG+AGG 0.616767 4_2:-54146070 None:intergenic
TCATGGACAGTCTTAAACAA+AGG 0.619848 4_2:-54147656 None:intergenic
ACTCATCACCAGCACTGATG+TGG 0.625166 4_2:+54141960 Msa0607340:CDS
GATTGCTAAGATTAATGCTG+AGG 0.627521 4_2:+54147511 Msa0607340:CDS
TCGTTCAAGGAATCATCGAA+GGG 0.628409 4_2:+54146243 Msa0607340:CDS
TCAAATGTCAATGTCTGGGG+AGG 0.628461 4_2:-54138179 None:intergenic
GCACAGCTTACTAGGCGGGA+TGG 0.629272 4_2:+54145685 Msa0607340:CDS
TTTCCTTAAGAAGCCAACTG+AGG 0.630085 4_2:+54143493 Msa0607340:CDS
TGAGTTGGCTAAGAAGAAAG+CGG 0.631786 4_2:+54146694 Msa0607340:CDS
CAATTGTGCAGTTGTACTGT+CGG 0.632558 4_2:+54141787 Msa0607340:CDS
CTCAGCTTCCCTTAGAGCCA+CGG 0.634084 4_2:-54146762 None:intergenic
TATGAGAAATACTCATGACC+AGG 0.635081 4_2:-54146419 None:intergenic
GAAGGTTATTGCGATGCAGA+GGG 0.636072 4_2:+54146580 Msa0607340:CDS
GCTGAGAGTAATGTCACAAG+AGG 0.637155 4_2:-54142012 None:intergenic
CATAAATGCAGAGTTAGTTG+AGG 0.639011 4_2:+54140351 Msa0607340:CDS
GGAAGCCAAGAATCAAGCTA+GGG 0.640292 4_2:+54146463 Msa0607340:CDS
TATTTACTGCGAGTATAGCA+AGG 0.641042 4_2:-54139742 None:intergenic
GCGGGTAACAAATGCTTCAG+GGG 0.645661 4_2:-54144567 None:intergenic
TGATAAAACTGAAGGTGCCA+TGG 0.647694 4_2:+54147595 Msa0607340:CDS
TGGACAGTCTTAAACAAAGG+TGG 0.649112 4_2:-54147653 None:intergenic
TATGCAATATTAACCTGCAG+GGG 0.649782 4_2:-54145811 None:intergenic
CTGGATAATTGGTGAATATG+CGG 0.650182 4_2:+54143367 Msa0607340:CDS
TACATTCATTTAATGCAGTG+AGG 0.651493 4_2:-54140519 None:intergenic
TAGTGTTCAATATGAAACCA+AGG 0.651992 4_2:+54146859 Msa0607340:CDS
GAAAATTGATGCAGAGACGA+AGG 0.652587 4_2:+54146562 Msa0607340:CDS
TCTCCTCTCAACTGACCCTG+AGG 0.655441 4_2:+54144135 Msa0607340:CDS
CGGGTAACAAATGCTTCAGG+GGG 0.655514 4_2:-54144566 None:intergenic
GATTCAAATGTCAATGTCTG+GGG 0.657062 4_2:-54138182 None:intergenic
GATTACTTGATGATAAATGG+TGG 0.658453 4_2:+54147476 Msa0607340:CDS
AAGGGGATCACATAGATACT+CGG 0.661548 4_2:-54140117 None:intergenic
AATGGTGGTGATAATAGTGG+TGG 0.661841 4_2:+54147572 Msa0607340:CDS
AGTTGAAGCAGGCAGTACAA+CGG 0.667803 4_2:-54145641 None:intergenic
TACCGGTGAGAGGTCCAAGA+CGG 0.667806 4_2:-54146060 None:intergenic
AAGGATCCCATCCAAGCAGG+AGG 0.669522 4_2:-54147695 None:intergenic
TTCAGACCGAAATATAGACC+AGG 0.671852 4_2:+54142312 Msa0607340:CDS
AACAATGGGATGCATTCGTG+TGG 0.671970 4_2:+54140085 Msa0607340:CDS
TGGTTGGAGTGGCGATCATG+AGG 0.675682 4_2:-54146209 None:intergenic
AGTTTATGAGAATCAAAGAG+AGG 0.679157 4_2:+54146649 Msa0607340:CDS
CGTCAAGTAGAGAAGGATCG+AGG 0.683311 4_2:-54144499 None:intergenic
GCAGAGTTAGTTGAGGACAG+GGG 0.685720 4_2:+54140358 Msa0607340:CDS
GAATCGAGCAGAAGGAAGGG+CGG 0.687176 4_2:+54138200 Msa0607340:five_prime_UTR
AGTGGTGGTGATAAAACTGA+AGG 0.688224 4_2:+54147587 Msa0607340:CDS
CTTTCCTGATCGTCAACACG+AGG 0.689163 4_2:-54146158 None:intergenic
TTGTAGAAAGAGTTACCCCA+CGG 0.695569 4_2:+54141753 Msa0607340:CDS
CGTTCAAGGAATCATCGAAG+GGG 0.697360 4_2:+54146244 Msa0607340:CDS
GACCAATTGTGAAGACAGCG+GGG 0.714278 4_2:-54146136 None:intergenic
ATTAATGCTGAGGCTATACG+CGG 0.715276 4_2:+54147521 Msa0607340:CDS
ATTGGCATGCTGTAACCGTG+GGG 0.715992 4_2:-54141768 None:intergenic
TCAGTGCACAGCTTACTAGG+CGG 0.719987 4_2:+54145680 Msa0607340:CDS
AGGACCAATTGTGAAGACAG+CGG 0.726189 4_2:-54146138 None:intergenic
CCATCGTCATGGAAGCAGCG+AGG 0.728643 4_2:-54146277 None:intergenic
GAAAGCGGCTTGGACCAAGG+CGG 0.735762 4_2:+54146709 Msa0607340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTATTTATTTTATGTTTTTT+AGG + chr4_2:54139556-54139575 Msa0607340:intron 10.0%
!! CAAAAAAAATAAAAAAAATG+GGG - chr4_2:54142389-54142408 None:intergenic 10.0%
!! CACAAAAAAAATAAAAAAAA+TGG - chr4_2:54142391-54142410 None:intergenic 10.0%
!! ATATTATAAAATTAATCATG+TGG + chr4_2:54147009-54147028 Msa0607340:intron 10.0%
!!! TTATTTTTTAAATGGAATTT+TGG + chr4_2:54147904-54147923 Msa0607340:three_prime_UTR 10.0%
!! AATTATGAAAAAAGAGAAAA+CGG - chr4_2:54138343-54138362 None:intergenic 15.0%
!!! TATTTTACATTTAGAAAAGA+TGG + chr4_2:54138718-54138737 Msa0607340:intron 15.0%
!! TAATATACAATAGAACTTTA+TGG + chr4_2:54138862-54138881 Msa0607340:intron 15.0%
!!! TAATTTTACAATTAGTGTTA+CGG + chr4_2:54139458-54139477 Msa0607340:intron 15.0%
!! AGTTATTCTAAACATAAATT+GGG - chr4_2:54139946-54139965 None:intergenic 15.0%
!! AAGTTATTCTAAACATAAAT+TGG - chr4_2:54139947-54139966 None:intergenic 15.0%
!!! ATAAACACTGTTTTATTAAA+GGG - chr4_2:54140753-54140772 None:intergenic 15.0%
!!! AATAAACACTGTTTTATTAA+AGG - chr4_2:54140754-54140773 None:intergenic 15.0%
!! TTTAATAAAACAGTGTTTAT+TGG + chr4_2:54140753-54140772 Msa0607340:intron 15.0%
!!! CAAAATAACTTGATATTTTT+TGG - chr4_2:54141539-54141558 None:intergenic 15.0%
!!! AATGTTTTTTTAATTCCAAA+TGG + chr4_2:54143575-54143594 Msa0607340:intron 15.0%
!! TTTATCTATAATTTATGAAC+AGG - chr4_2:54143638-54143657 None:intergenic 15.0%
!! TTTATGAAACAATATAAAGA+AGG - chr4_2:54143972-54143991 None:intergenic 15.0%
!!! AATTGTCATATTTCTAAAAT+TGG + chr4_2:54145293-54145312 Msa0607340:intron 15.0%
!!! ATTGTCATATTTCTAAAATT+GGG + chr4_2:54145294-54145313 Msa0607340:intron 15.0%
!! AAGTTATATATATATTTGCT+TGG - chr4_2:54146895-54146914 None:intergenic 15.0%
!! TTTAAATATTTACTTAGTGT+TGG + chr4_2:54147147-54147166 Msa0607340:intron 15.0%
!!! TTTTTTGGTGATTAAAATTT+TGG + chr4_2:54147192-54147211 Msa0607340:intron 15.0%
!! AGTAATAACAAACAGTTTAA+AGG - chr4_2:54138546-54138565 None:intergenic 20.0%
!! CAATATAATACTAAATTTCC+TGG - chr4_2:54138687-54138706 None:intergenic 20.0%
!! GAATATTTACATTATTATCG+TGG + chr4_2:54138949-54138968 Msa0607340:intron 20.0%
!! TTATAATAGAAATACGTGTT+TGG + chr4_2:54139007-54139026 Msa0607340:intron 20.0%
!! AAAATATACAGACAAAAGAA+TGG - chr4_2:54139795-54139814 None:intergenic 20.0%
!! TCAAACTAAAAAATAGACAT+GGG - chr4_2:54140187-54140206 None:intergenic 20.0%
!! ATCAAACTAAAAAATAGACA+TGG - chr4_2:54140188-54140207 None:intergenic 20.0%
!!! TAAACACTGTTTTATTAAAG+GGG - chr4_2:54140752-54140771 None:intergenic 20.0%
!! TAAATTGTCCTCATAATTAA+TGG - chr4_2:54141077-54141096 None:intergenic 20.0%
!! GTTATAATATTTCAAACAGT+GGG - chr4_2:54141292-54141311 None:intergenic 20.0%
!! ATTGAAACATGTTAAAAGAT+GGG - chr4_2:54141631-54141650 None:intergenic 20.0%
!! ATTTGTCAATATTAATGCAT+CGG + chr4_2:54141861-54141880 Msa0607340:intron 20.0%
!! AAAAATAAAAAAAATGGGGA+GGG - chr4_2:54142385-54142404 None:intergenic 20.0%
!! AAAAAATAAAAAAAATGGGG+AGG - chr4_2:54142386-54142405 None:intergenic 20.0%
!! GTTATAGTTAGAATTAGTAA+GGG - chr4_2:54142673-54142692 None:intergenic 20.0%
!! AGTTATAGTTAGAATTAGTA+AGG - chr4_2:54142674-54142693 None:intergenic 20.0%
!! GTGTCAAATTAATAAAAGAA+AGG - chr4_2:54142725-54142744 None:intergenic 20.0%
!! CAAGATAAAAGTAAATTATG+TGG + chr4_2:54143025-54143044 Msa0607340:CDS 20.0%
!! AAGATTTGTAAAACCAATAA+TGG - chr4_2:54143814-54143833 None:intergenic 20.0%
!!! GTTTTGATTCCAATAATTTT+AGG - chr4_2:54143904-54143923 None:intergenic 20.0%
!! TATAAACAAATAGATAGCAA+AGG - chr4_2:54143946-54143965 None:intergenic 20.0%
!!! TAAGTTGATAAATTCAGTTT+AGG - chr4_2:54144246-54144265 None:intergenic 20.0%
!!! ATCATTCTCTTTAAAGTATA+AGG + chr4_2:54144297-54144316 Msa0607340:intron 20.0%
!!! TGAGTAAAATTAAGTATTGT+GGG + chr4_2:54144833-54144852 Msa0607340:intron 20.0%
!! ACAATATATTTCAAAAGTTG+CGG - chr4_2:54145015-54145034 None:intergenic 20.0%
!!! CTTTTGAAATATATTGTTCA+TGG + chr4_2:54145018-54145037 Msa0607340:intron 20.0%
!! AAAATTGACATTTCAAAAGT+TGG + chr4_2:54145162-54145181 Msa0607340:intron 20.0%
!! AAATTGACATTTCAAAAGTT+GGG + chr4_2:54145163-54145182 Msa0607340:intron 20.0%
!!! AATTTTTTATCCCTGAAATT+GGG - chr4_2:54145277-54145296 None:intergenic 20.0%
!!! TTGTCATATTTCTAAAATTG+GGG + chr4_2:54145295-54145314 Msa0607340:intron 20.0%
!! NNNNACTAAAAAAGAAAGCA+TGG + chr4_2:54146015-54146034 Msa0607340:intron 20.0%
!! AGTGAATTATAATTTCATGA+TGG + chr4_2:54146948-54146967 Msa0607340:intron 20.0%
!! GTAATTTGAATTGAAGAATA+TGG + chr4_2:54147049-54147068 Msa0607340:intron 20.0%
!!! GATGCTTGTTATTTTTTAAA+TGG + chr4_2:54147896-54147915 Msa0607340:three_prime_UTR 20.0%
! AATTATCCAGATCAGAAATA+CGG - chr4_2:54138414-54138433 None:intergenic 25.0%
!! TATTTCTGATCTGGATAATT+AGG + chr4_2:54138414-54138433 Msa0607340:intron 25.0%
! ATCATCAACATTTGCATAAT+TGG - chr4_2:54138481-54138500 None:intergenic 25.0%
! TAGAAACGAAATTCAGAAAT+AGG - chr4_2:54138618-54138637 None:intergenic 25.0%
! TTTACATTTAGAAAAGATGG+TGG + chr4_2:54138721-54138740 Msa0607340:intron 25.0%
! TTACATTTAGAAAAGATGGT+GGG + chr4_2:54138722-54138741 Msa0607340:intron 25.0%
!!! ACTTTAATTTTCCATTGTCA+AGG + chr4_2:54139076-54139095 Msa0607340:intron 25.0%
!! ATATACACTGAATCCTATTT+TGG + chr4_2:54139190-54139209 Msa0607340:intron 25.0%
!!! AATCCTATTTTGGTGAAATT+GGG + chr4_2:54139200-54139219 Msa0607340:intron 25.0%
!! AGTATTTGAAGTGTGATTTA+AGG + chr4_2:54139316-54139335 Msa0607340:intron 25.0%
!! ATCGAGATTTTACACAAAAT+CGG - chr4_2:54139514-54139533 None:intergenic 25.0%
! AAAGACATTGAATGAAAGTA+AGG - chr4_2:54139818-54139837 None:intergenic 25.0%
!!! TTTTGCTATTGCTAATTTCT+TGG + chr4_2:54139861-54139880 Msa0607340:intron 25.0%
!!! ATTTCTTATTGTGTTGATTC+CGG + chr4_2:54140211-54140230 Msa0607340:intron 25.0%
! TGTGTTTGATATATATTGAC+AGG + chr4_2:54140273-54140292 Msa0607340:intron 25.0%
! AAACAGAAGATTTATTAGAG+GGG - chr4_2:54140857-54140876 None:intergenic 25.0%
! GAAACAGAAGATTTATTAGA+GGG - chr4_2:54140858-54140877 None:intergenic 25.0%
! AGAAACAGAAGATTTATTAG+AGG - chr4_2:54140859-54140878 None:intergenic 25.0%
! GGTTATAATATTTCAAACAG+TGG - chr4_2:54141293-54141312 None:intergenic 25.0%
! ATTGTCTTTCATTTGTATCA+TGG - chr4_2:54141314-54141333 None:intergenic 25.0%
!!! ATTTTAACTCTTGATCTTAG+AGG - chr4_2:54141343-54141362 None:intergenic 25.0%
! TCAAATTCTACAATCAACTA+TGG - chr4_2:54141368-54141387 None:intergenic 25.0%
! ATCATGAAAATCAGCTATTA+AGG - chr4_2:54141397-54141416 None:intergenic 25.0%
! CCAAAATATATTTCTCCAAA+GGG - chr4_2:54141429-54141448 None:intergenic 25.0%
! ACCAAAATATATTTCTCCAA+AGG - chr4_2:54141430-54141449 None:intergenic 25.0%
! GATTGAAACATGTTAAAAGA+TGG - chr4_2:54141632-54141651 None:intergenic 25.0%
! AGATAATAAGTTACAGGTAA+GGG - chr4_2:54141833-54141852 None:intergenic 25.0%
! AAGATAATAAGTTACAGGTA+AGG - chr4_2:54141834-54141853 None:intergenic 25.0%
! GATGCATTAATATTGACAAA+TGG - chr4_2:54141862-54141881 None:intergenic 25.0%
! CTACATGTCATTATAAATTG+TGG - chr4_2:54141920-54141939 None:intergenic 25.0%
! AATAAGATTGATATTTCGCA+GGG - chr4_2:54142061-54142080 None:intergenic 25.0%
! TCAATCTTATTGTACAAAGA+AGG + chr4_2:54142070-54142089 Msa0607340:CDS 25.0%
! AATTCTTGCACATGAAATTA+AGG + chr4_2:54142098-54142117 Msa0607340:CDS 25.0%
! CACTTAGTTATAAACAAACT+AGG + chr4_2:54142151-54142170 Msa0607340:intron 25.0%
! AAAATAAAAAAAATGGGGAG+GGG - chr4_2:54142384-54142403 None:intergenic 25.0%
! AATGATCAAAAAAAGAAGAG+AGG + chr4_2:54142529-54142548 Msa0607340:intron 25.0%
! TTTCATGAGAAAAATTGTTC+TGG - chr4_2:54142793-54142812 None:intergenic 25.0%
!! TCCTCATCTTTTCTTTTTTT+TGG + chr4_2:54143113-54143132 Msa0607340:intron 25.0%
!! CCTCATCTTTTCTTTTTTTT+GGG + chr4_2:54143114-54143133 Msa0607340:intron 25.0%
! ATTTGAACAAATGTGTTATG+AGG - chr4_2:54143545-54143564 None:intergenic 25.0%
! AATATGTAGCTAATTAGTTG+AGG + chr4_2:54144195-54144214 Msa0607340:intron 25.0%
!! GTGAGTAAAATTAAGTATTG+TGG + chr4_2:54144832-54144851 Msa0607340:intron 25.0%
! CAATATATTTCAAAAGTTGC+GGG - chr4_2:54145014-54145033 None:intergenic 25.0%
!!! AAAACACGTTACTTTTTAGT+TGG + chr4_2:54145191-54145210 Msa0607340:intron 25.0%
!!! AAACACGTTACTTTTTAGTT+GGG + chr4_2:54145192-54145211 Msa0607340:intron 25.0%
!!! CAATTTTTTATCCCTGAAAT+TGG - chr4_2:54145278-54145297 None:intergenic 25.0%
!!! TGTCATATTTCTAAAATTGG+GGG + chr4_2:54145296-54145315 Msa0607340:intron 25.0%
!!! AACAAGTTTTGAGAATTTCT+AGG + chr4_2:54145353-54145372 Msa0607340:intron 25.0%
!!! ACAAGTTTTGAGAATTTCTA+GGG + chr4_2:54145354-54145373 Msa0607340:intron 25.0%
!! CAACAATTATATGTGTTGAT+AGG - chr4_2:54145533-54145552 None:intergenic 25.0%
! GCATTATTATGTAAATTGCA+AGG - chr4_2:54145579-54145598 None:intergenic 25.0%
! CAAATGTGTTCTTGTTAAAT+TGG - chr4_2:54145774-54145793 None:intergenic 25.0%
! CAATTTAACAAGAACACATT+TGG + chr4_2:54145772-54145791 Msa0607340:CDS 25.0%
! AATTCAGTTCTACTAATAGA+TGG + chr4_2:54145862-54145881 Msa0607340:intron 25.0%
! TCATGAGTATTTCTCATATT+TGG + chr4_2:54146424-54146443 Msa0607340:CDS 25.0%
! CATGAGTATTTCTCATATTT+GGG + chr4_2:54146425-54146444 Msa0607340:CDS 25.0%
!! TGAAATTGGTTCAAAATTGA+GGG + chr4_2:54146514-54146533 Msa0607340:CDS 25.0%
!!! ATAACGATGGATTACTTTTT+TGG + chr4_2:54147177-54147196 Msa0607340:intron 25.0%
!!! TTGGTGATTAAAATTTTGGA+TGG + chr4_2:54147196-54147215 Msa0607340:intron 25.0%
!! ATTAAAATTTTGGATGGTGT+AGG + chr4_2:54147202-54147221 Msa0607340:intron 25.0%
! TTAGTCCAAATACTAATCTT+AGG - chr4_2:54147554-54147573 None:intergenic 25.0%
! AAGATTAGTATTTGGACTAA+TGG + chr4_2:54147554-54147573 Msa0607340:CDS 25.0%
! AAGTATTAGGTTTATAGTAG+TGG + chr4_2:54147749-54147768 Msa0607340:three_prime_UTR 25.0%
!! TGTATCGATCACATAATAAA+AGG - chr4_2:54147801-54147820 None:intergenic 25.0%
!!! ACTAGTCGTTTATTTGTTTT+GGG + chr4_2:54147831-54147850 Msa0607340:three_prime_UTR 25.0%
TGAAAAAAGAGAAAACGGAT+CGG - chr4_2:54138338-54138357 None:intergenic 30.0%
AAAGATGAAGGAAGTGAAAT+CGG - chr4_2:54138383-54138402 None:intergenic 30.0%
CAACATTTGCATAATTGGTT+CGG - chr4_2:54138476-54138495 None:intergenic 30.0%
TATTCTATCAGTTAGATTCC+AGG + chr4_2:54138666-54138685 Msa0607340:intron 30.0%
TACATTTAGAAAAGATGGTG+GGG + chr4_2:54138723-54138742 Msa0607340:intron 30.0%
! TTTCTCCTACAGTTTTTCTA+CGG - chr4_2:54138818-54138837 None:intergenic 30.0%
AGGAGAAACTATTAATGAGT+TGG + chr4_2:54138830-54138849 Msa0607340:intron 30.0%
! GAAACTATTAATGAGTTGGA+TGG + chr4_2:54138834-54138853 Msa0607340:intron 30.0%
TGTATATTCTTAATCGCTGA+GGG - chr4_2:54139177-54139196 None:intergenic 30.0%
!!! GAATCCTATTTTGGTGAAAT+TGG + chr4_2:54139199-54139218 Msa0607340:intron 30.0%
ACAATTCAACGATCAACAAA+GGG - chr4_2:54139234-54139253 None:intergenic 30.0%
TACAATTCAACGATCAACAA+AGG - chr4_2:54139235-54139254 None:intergenic 30.0%
! ATTTTACACAAAATCGGGAA+GGG - chr4_2:54139508-54139527 None:intergenic 30.0%
! TCGAGATTTTACACAAAATC+GGG - chr4_2:54139513-54139532 None:intergenic 30.0%
ATAAATAGAAGTTAGACTCG+AGG - chr4_2:54139544-54139563 None:intergenic 30.0%
TTGCATGCAAACAGAAAATT+TGG + chr4_2:54139664-54139683 Msa0607340:CDS 30.0%
! AAATTTGGAGCTGAAAAAGT+TGG + chr4_2:54139679-54139698 Msa0607340:CDS 30.0%
CGCAGTAAATACATTTGTAA+AGG + chr4_2:54139754-54139773 Msa0607340:CDS 30.0%
! TGCTAATTTCTTGGATTTTG+AGG + chr4_2:54139870-54139889 Msa0607340:intron 30.0%
ATATATATCAAACACACGCA+CGG - chr4_2:54140269-54140288 None:intergenic 30.0%
AACAACCATTGGATTATTGT+CGG - chr4_2:54140413-54140432 None:intergenic 30.0%
TACATTCATTTAATGCAGTG+AGG - chr4_2:54140522-54140541 None:intergenic 30.0%
TAGAAGAAAACAGTGTTCAT+TGG + chr4_2:54140646-54140665 Msa0607340:intron 30.0%
AACTAAGTCACTCAAATACT+TGG - chr4_2:54140690-54140709 None:intergenic 30.0%
TTAAACCTCTATTACATTCC+AGG + chr4_2:54140776-54140795 Msa0607340:intron 30.0%
AAATACCTGGAATGTAATAG+AGG - chr4_2:54140784-54140803 None:intergenic 30.0%
AGTTGAATAGTTAGTTGGTT+AGG - chr4_2:54140910-54140929 None:intergenic 30.0%
TTATAAATGCACGGTAAAGA+CGG - chr4_2:54141040-54141059 None:intergenic 30.0%
TGGTCATTGTTATAAATGCA+CGG - chr4_2:54141049-54141068 None:intergenic 30.0%
CCTCATAATTAATGGAGTAT+TGG - chr4_2:54141069-54141088 None:intergenic 30.0%
CCAATACTCCATTAATTATG+AGG + chr4_2:54141066-54141085 Msa0607340:intron 30.0%
!! TTCAAATTGAGTGTCGTTTA+AGG - chr4_2:54141156-54141175 None:intergenic 30.0%
AAACGACACTCAATTTGAAA+TGG + chr4_2:54141157-54141176 Msa0607340:intron 30.0%
TTTAGGGAGAGAATATTGTA+AGG - chr4_2:54141208-54141227 None:intergenic 30.0%
CTTAAAACAAAACCCTGTTA+GGG + chr4_2:54141265-54141284 Msa0607340:intron 30.0%
!! CCCTTTGGAGAAATATATTT+TGG + chr4_2:54141426-54141445 Msa0607340:intron 30.0%
TCAATCAATCTAACACAACT+TGG + chr4_2:54141646-54141665 Msa0607340:intron 30.0%
TCTGCAAGATAATAAGTTAC+AGG - chr4_2:54141839-54141858 None:intergenic 30.0%
CAATAAGATTGATATTTCGC+AGG - chr4_2:54142062-54142081 None:intergenic 30.0%
ATTTCATGTGCAAGAATTGT+CGG - chr4_2:54142096-54142115 None:intergenic 30.0%
TTATAAACAAACTAGGTCAC+CGG + chr4_2:54142158-54142177 Msa0607340:intron 30.0%
! TTTGGCGTCTAAAATAAAAG+AGG - chr4_2:54142192-54142211 None:intergenic 30.0%
! TTTTAGACGCCAAATGATTA+TGG + chr4_2:54142198-54142217 Msa0607340:intron 30.0%
TTTAGACGCCAAATGATTAT+GGG + chr4_2:54142199-54142218 Msa0607340:intron 30.0%
TGATCCTATCTATGTGAAAA+TGG + chr4_2:54142261-54142280 Msa0607340:CDS 30.0%
! TTCTCCATTTTCACATAGAT+AGG - chr4_2:54142268-54142287 None:intergenic 30.0%
GTATAATGTAAAAGCTTACC+TGG - chr4_2:54142333-54142352 None:intergenic 30.0%
CTACACACTATGAAATGAAT+TGG + chr4_2:54142463-54142482 Msa0607340:intron 30.0%
CTGTTAGGATAATGAATAAG+GGG - chr4_2:54142697-54142716 None:intergenic 30.0%
CCTGTTAGGATAATGAATAA+GGG - chr4_2:54142698-54142717 None:intergenic 30.0%
TAACCAATGGGTCAAAAAAA+AGG - chr4_2:54142856-54142875 None:intergenic 30.0%
! TGACGTAGATTTTGTTAGAA+AGG + chr4_2:54142923-54142942 Msa0607340:CDS 30.0%
AGTAAATTATGTGGTTCAAG+AGG + chr4_2:54143034-54143053 Msa0607340:CDS 30.0%
AAAGAAAACAATACGTGTTG+GGG - chr4_2:54143094-54143113 None:intergenic 30.0%
GAAAGAAAACAATACGTGTT+GGG - chr4_2:54143095-54143114 None:intergenic 30.0%
CCCAAAAAAAAGAAAAGATG+AGG - chr4_2:54143117-54143136 None:intergenic 30.0%
!!! CATCTTTTCTTTTTTTTGGG+AGG + chr4_2:54143117-54143136 Msa0607340:intron 30.0%
!!! TTTTCTTTTTTTTGGGAGGT+GGG + chr4_2:54143121-54143140 Msa0607340:intron 30.0%
AATTTATGAACAGGATTCTG+AGG - chr4_2:54143629-54143648 None:intergenic 30.0%
! TTTTTCTACCGAAATCTAGT+AGG + chr4_2:54143680-54143699 Msa0607340:intron 30.0%
! GATATAAGCTCAAATTTGCT+AGG - chr4_2:54143871-54143890 None:intergenic 30.0%
AGCAAATTTGAGCTTATATC+TGG + chr4_2:54143871-54143890 Msa0607340:intron 30.0%
GGAACGATTCCTAAAATTAT+TGG + chr4_2:54143892-54143911 Msa0607340:intron 30.0%
AACAAATAGATAGCAAAGGA+CGG - chr4_2:54143942-54143961 None:intergenic 30.0%
ATTCAAGAAATCAAACCTCA+GGG - chr4_2:54144153-54144172 None:intergenic 30.0%
AATTCAAGAAATCAAACCTC+AGG - chr4_2:54144154-54144173 None:intergenic 30.0%
ACATATTGAACTGAAGAAAC+TGG - chr4_2:54144182-54144201 None:intergenic 30.0%
!! AGAAAGTTGTTATTTCCATG+TGG - chr4_2:54144358-54144377 None:intergenic 30.0%
ATCAAATCACCAAGTAAATC+TGG - chr4_2:54144758-54144777 None:intergenic 30.0%
! AGATTTACTTGGTGATTTGA+TGG + chr4_2:54144757-54144776 Msa0607340:CDS 30.0%
! GATTTACTTGGTGATTTGAT+GGG + chr4_2:54144758-54144777 Msa0607340:CDS 30.0%
! ATTGTGGGTTACTTGTAAAA+TGG + chr4_2:54144848-54144867 Msa0607340:intron 30.0%
CATGCGATAAAAAAAGAGAA+TGG + chr4_2:54144918-54144937 Msa0607340:intron 30.0%
TAAGTCCCTCATTGAAAAAT+TGG + chr4_2:54144977-54144996 Msa0607340:intron 30.0%
!! AGACACCAATTTTTCAATGA+GGG - chr4_2:54144985-54145004 None:intergenic 30.0%
!! AAGACACCAATTTTTCAATG+AGG - chr4_2:54144986-54145005 None:intergenic 30.0%
TATTGTTCATGGTCTTTGTA+TGG + chr4_2:54145029-54145048 Msa0607340:intron 30.0%
GGGACAAAATATATTGTTCA+TGG + chr4_2:54145087-54145106 Msa0607340:intron 30.0%
TATTGTTCATGGTCTTTGTA+TGG + chr4_2:54145029-54145048 Msa0607340:intron 30.0%
ATTGTTCATGGTCTTTGTAT+GGG + chr4_2:54145030-54145049 Msa0607340:intron 30.0%
!!! AACACGTTACTTTTTAGTTG+GGG + chr4_2:54145193-54145212 Msa0607340:intron 30.0%
!! ATATTTCTAAAATTGGGGGT+CGG + chr4_2:54145300-54145319 Msa0607340:intron 30.0%
!!! CAAGTTTTGAGAATTTCTAG+GGG + chr4_2:54145355-54145374 Msa0607340:intron 30.0%
AAAACATGTTCACATGACTT+TGG + chr4_2:54145502-54145521 Msa0607340:intron 30.0%
AAACATGTTCACATGACTTT+GGG + chr4_2:54145503-54145522 Msa0607340:intron 30.0%
CAGGTTAATATTGCATACAA+TGG + chr4_2:54145817-54145836 Msa0607340:intron 30.0%
TAAGTTTGGCATATTTGAGA+AGG - chr4_2:54146184-54146203 None:intergenic 30.0%
ATCATGAGGTGAAATAAGTT+TGG - chr4_2:54146198-54146217 None:intergenic 30.0%
!! CAACTTGAGTTGAATCAATT+TGG + chr4_2:54146353-54146372 Msa0607340:intron 30.0%
CAATGCAAATGTTTAGCAAT+TGG + chr4_2:54146388-54146407 Msa0607340:intron 30.0%
! GTGAAATTGGTTCAAAATTG+AGG + chr4_2:54146513-54146532 Msa0607340:CDS 30.0%
AGTTTATGAGAATCAAAGAG+AGG + chr4_2:54146649-54146668 Msa0607340:CDS 30.0%
TAGTGTTCAATATGAAACCA+AGG + chr4_2:54146859-54146878 Msa0607340:CDS 30.0%
! ATCATGTGGTAATTAACTTG+TGG + chr4_2:54147023-54147042 Msa0607340:intron 30.0%
AAACAAGCTGAAAAGTGAAA+AGG - chr4_2:54147090-54147109 None:intergenic 30.0%
! TGTTGGCTATTATATAACGA+TGG + chr4_2:54147164-54147183 Msa0607340:intron 30.0%
! AGGGATTACTTGATGATAAA+TGG + chr4_2:54147473-54147492 Msa0607340:CDS 30.0%
! GATTACTTGATGATAAATGG+TGG + chr4_2:54147476-54147495 Msa0607340:CDS 30.0%
TTGAGCCTAAGATTAGTATT+TGG + chr4_2:54147546-54147565 Msa0607340:CDS 30.0%
ATTAGTATTTGGACTAATGG+TGG + chr4_2:54147557-54147576 Msa0607340:CDS 30.0%
! TTAAGAGCTTTTGTCAGATA+AGG - chr4_2:54147717-54147736 None:intergenic 30.0%
! CACTAGTCGTTTATTTGTTT+TGG + chr4_2:54147830-54147849 Msa0607340:three_prime_UTR 30.0%
GATTCAAATGTCAATGTCTG+GGG - chr4_2:54138185-54138204 None:intergenic 35.0%
CGATTCAAATGTCAATGTCT+GGG - chr4_2:54138186-54138205 None:intergenic 35.0%
TCGATTCAAATGTCAATGTC+TGG - chr4_2:54138187-54138206 None:intergenic 35.0%
! TAAGCTCTTCTTTGAGTTCA+GGG - chr4_2:54138283-54138302 None:intergenic 35.0%
! TTAAGCTCTTCTTTGAGTTC+AGG - chr4_2:54138284-54138303 None:intergenic 35.0%
AGAGCTTAATTCTCAGTACA+AGG + chr4_2:54138295-54138314 Msa0607340:CDS 35.0%
GAAAAAAGAGAAAACGGATC+GGG - chr4_2:54138337-54138356 None:intergenic 35.0%
AAATCGGATGGATCTAGAAA+TGG - chr4_2:54138367-54138386 None:intergenic 35.0%
AATTAGGTGTTTACGATTCG+TGG + chr4_2:54138430-54138449 Msa0607340:intron 35.0%
TTACACACAATCCTTGACAA+TGG - chr4_2:54139090-54139109 None:intergenic 35.0%
ATTGTCAAGGATTGTGTGTA+AGG + chr4_2:54139089-54139108 Msa0607340:intron 35.0%
! CATAGAGTCTCAAGATTTTG+TGG + chr4_2:54139142-54139161 Msa0607340:intron 35.0%
GTGTATATTCTTAATCGCTG+AGG - chr4_2:54139178-54139197 None:intergenic 35.0%
! TTTTACACAAAATCGGGAAG+GGG - chr4_2:54139507-54139526 None:intergenic 35.0%
! GATTTTACACAAAATCGGGA+AGG - chr4_2:54139509-54139528 None:intergenic 35.0%
AAAAGTGATTGCTGCTATGA+CGG + chr4_2:54139601-54139620 Msa0607340:CDS 35.0%
TATTTACTGCGAGTATAGCA+AGG - chr4_2:54139745-54139764 None:intergenic 35.0%
! ATAAATTGGGAGCACAAGAT+GGG - chr4_2:54139933-54139952 None:intergenic 35.0%
! CATTTTATGAAATGCTGCTC+AGG + chr4_2:54140019-54140038 Msa0607340:intron 35.0%
AAGGCACGAATTAAAGGATT+TGG - chr4_2:54140056-54140075 None:intergenic 35.0%
! ACCTTTAGACATCTTTGAAG+GGG - chr4_2:54140137-54140156 None:intergenic 35.0%
CACCTTTAGACATCTTTGAA+GGG - chr4_2:54140138-54140157 None:intergenic 35.0%
ATACAGCTTTGCAACACAAA+TGG - chr4_2:54140329-54140348 None:intergenic 35.0%
CATAAATGCAGAGTTAGTTG+AGG + chr4_2:54140351-54140370 Msa0607340:CDS 35.0%
GATATCCGACAATAATCCAA+TGG + chr4_2:54140405-54140424 Msa0607340:CDS 35.0%
TGACTAGTGATCTCAAAGAT+GGG - chr4_2:54140484-54140503 None:intergenic 35.0%
ATGACTAGTGATCTCAAAGA+TGG - chr4_2:54140485-54140504 None:intergenic 35.0%
!! AAAGGGGACATCATTAGTTT+TGG - chr4_2:54140736-54140755 None:intergenic 35.0%
!! AATTTTGGAGAGGATCTAAG+AGG - chr4_2:54140826-54140845 None:intergenic 35.0%
!! GGACACAATTAATTTTGGAG+AGG - chr4_2:54140836-54140855 None:intergenic 35.0%
! AGAGGGGACACAATTAATTT+TGG - chr4_2:54140841-54140860 None:intergenic 35.0%
AGCGACAGTCAATATGAAAT+GGG - chr4_2:54140939-54140958 None:intergenic 35.0%
TATAAATGCACGGTAAAGAC+GGG - chr4_2:54141039-54141058 None:intergenic 35.0%
GCAACAAAAGACTTGATAAG+TGG - chr4_2:54141111-54141130 None:intergenic 35.0%
!!! GTTGCTTTTCTTAAACCTTG+TGG + chr4_2:54141126-54141145 Msa0607340:intron 35.0%
! GACACTCAATTTGAAATGGA+AGG + chr4_2:54141161-54141180 Msa0607340:intron 35.0%
! ATGGAAGGTGTATCTAACAA+AGG + chr4_2:54141176-54141195 Msa0607340:intron 35.0%
! TGGAAGGTGTATCTAACAAA+GGG + chr4_2:54141177-54141196 Msa0607340:intron 35.0%
GCTTAAAACAAAACCCTGTT+AGG + chr4_2:54141264-54141283 Msa0607340:intron 35.0%
!! CATGATGATTTTGATCCCTT+TGG + chr4_2:54141411-54141430 Msa0607340:intron 35.0%
TACAATACTGCACAATCAAC+TGG - chr4_2:54141563-54141582 None:intergenic 35.0%
AACATGTTAAAAGATGGGCA+AGG - chr4_2:54141626-54141645 None:intergenic 35.0%
TATAAAAACTTGACCCCATC+TGG - chr4_2:54141681-54141700 None:intergenic 35.0%
! ATGGGGTCAAGTTTTTATAC+TGG + chr4_2:54141682-54141701 Msa0607340:CDS 35.0%
GTAGATGATCCTTCAACAAA+TGG + chr4_2:54141936-54141955 Msa0607340:intron 35.0%
! TGATGAGTTCCATTTGTTGA+AGG - chr4_2:54141948-54141967 None:intergenic 35.0%
! CCATCTTTTTGCAAAGATTC+CGG - chr4_2:54141987-54142006 None:intergenic 35.0%
AATAAAAGAGGCCCATAATC+CGG - chr4_2:54142180-54142199 None:intergenic 35.0%
AGCTTACCTGGTCTATATTT+CGG - chr4_2:54142321-54142340 None:intergenic 35.0%
GTAGTGTTCACTAAAATCAC+TGG - chr4_2:54142447-54142466 None:intergenic 35.0%
ATGCAGAAATCCTTTGTGAA+AGG - chr4_2:54142572-54142591 None:intergenic 35.0%
CCCTTATTCATTATCCTAAC+AGG + chr4_2:54142695-54142714 Msa0607340:intron 35.0%
GCCTGTTAGGATAATGAATA+AGG - chr4_2:54142699-54142718 None:intergenic 35.0%
!!! TCACCTTTTTTTTGACCCAT+TGG + chr4_2:54142850-54142869 Msa0607340:intron 35.0%
!!! GCAGGTTTTGTTGGAATTTA+AGG + chr4_2:54142884-54142903 Msa0607340:intron 35.0%
AGCTGCTCTCTCTAATTTAA+TGG - chr4_2:54142973-54142992 None:intergenic 35.0%
GGAAAGAAAACAATACGTGT+TGG - chr4_2:54143096-54143115 None:intergenic 35.0%
!!! CTTTTCTTTTTTTTGGGAGG+TGG + chr4_2:54143120-54143139 Msa0607340:intron 35.0%
!!! TTTCTTTTTTTTGGGAGGTG+GGG + chr4_2:54143122-54143141 Msa0607340:intron 35.0%
CTCACAAAGAGTTGCAATTA+TGG - chr4_2:54143220-54143239 None:intergenic 35.0%
AAAACATATACCTTGGCTTC+GGG - chr4_2:54143264-54143283 None:intergenic 35.0%
GAAAACATATACCTTGGCTT+CGG - chr4_2:54143265-54143284 None:intergenic 35.0%
CACTCAGAAAACATATACCT+TGG - chr4_2:54143271-54143290 None:intergenic 35.0%
! TTTTCATCCACTTTCCTATC+TGG + chr4_2:54143329-54143348 Msa0607340:intron 35.0%
GCATCAATGATCTGGATAAT+TGG + chr4_2:54143356-54143375 Msa0607340:CDS 35.0%
CTGGATAATTGGTGAATATG+CGG + chr4_2:54143367-54143386 Msa0607340:CDS 35.0%
GAACAAATGTGTTATGAGGA+AGG - chr4_2:54143541-54143560 None:intergenic 35.0%
TCACGCATTTGATATCCATT+TGG - chr4_2:54143593-54143612 None:intergenic 35.0%
GGATTTGTCCTACTAGATTT+CGG - chr4_2:54143691-54143710 None:intergenic 35.0%
ATAGACCACTTGAAGAAAGA+GGG - chr4_2:54143726-54143745 None:intergenic 35.0%
TATAGACCACTTGAAGAAAG+AGG - chr4_2:54143727-54143746 None:intergenic 35.0%
TACAGTGAAACTAACATCGA+AGG - chr4_2:54144030-54144049 None:intergenic 35.0%
TCACTGTAGCTAATCTTTAC+AGG + chr4_2:54144042-54144061 Msa0607340:intron 35.0%
!! TGTTTTGAACAATGCGACTA+TGG + chr4_2:54144066-54144085 Msa0607340:CDS 35.0%
GAGATCGTGCATACATATAT+TGG + chr4_2:54144110-54144129 Msa0607340:CDS 35.0%
ATGTAGCTAATTAGTTGAGG+TGG + chr4_2:54144198-54144217 Msa0607340:intron 35.0%
TTTGAGTCATCAGTTATCAC+AGG - chr4_2:54144476-54144495 None:intergenic 35.0%
! GTCATCATCTTCAGTTTTCT+GGG - chr4_2:54144606-54144625 None:intergenic 35.0%
! AGTCATCATCTTCAGTTTTC+TGG - chr4_2:54144607-54144626 None:intergenic 35.0%
TCATCTGTAAATCCTGCTAA+TGG + chr4_2:54144650-54144669 Msa0607340:CDS 35.0%
! CTTAATTTTACTCACCCTGA+AGG - chr4_2:54144827-54144846 None:intergenic 35.0%
!! TTTTTAGTCCCCCTAAAACT+TGG + chr4_2:54144952-54144971 Msa0607340:intron 35.0%
!!! GACTTAAACCAAGTTTTAGG+GGG - chr4_2:54144963-54144982 None:intergenic 35.0%
!! GGACTTAAACCAAGTTTTAG+GGG - chr4_2:54144964-54144983 None:intergenic 35.0%
! GGGACTTAAACCAAGTTTTA+GGG - chr4_2:54144965-54144984 None:intergenic 35.0%
! AGGGACTTAAACCAAGTTTT+AGG - chr4_2:54144966-54144985 None:intergenic 35.0%
TCTTTGTATGGCGTTAAAGA+GGG + chr4_2:54145041-54145060 Msa0607340:intron 35.0%
TTGTTCATGGTCTTTGTATG+GGG + chr4_2:54145031-54145050 Msa0607340:intron 35.0%
TCCTTGTGGTAGAAATCAAA+GGG + chr4_2:54145236-54145255 Msa0607340:intron 35.0%
!!! GGAAACACGTTACTTTTCAA+AGG + chr4_2:54145321-54145340 Msa0607340:intron 35.0%
AATTCTCAAGTTCCACTTGA+TGG + chr4_2:54145739-54145758 Msa0607340:CDS 35.0%
TATGCAATATTAACCTGCAG+GGG - chr4_2:54145814-54145833 None:intergenic 35.0%
GTATGCAATATTAACCTGCA+GGG - chr4_2:54145815-54145834 None:intergenic 35.0%
TGTATGCAATATTAACCTGC+AGG - chr4_2:54145816-54145835 None:intergenic 35.0%
!! TAGATGGCTTATTGCTTTTC+AGG + chr4_2:54145878-54145897 Msa0607340:intron 35.0%
!! AAGAAAGCATGGATTTTTCC+CGG + chr4_2:54146026-54146045 Msa0607340:intron 35.0%
ACTTCGAATGTGTAGTTTAC+CGG - chr4_2:54146080-54146099 None:intergenic 35.0%
GAGAACAAAAGGAAGTTTCT+CGG - chr4_2:54146117-54146136 None:intergenic 35.0%
TGCAAATGTTTAGCAATTGG+TGG + chr4_2:54146391-54146410 Msa0607340:intron 35.0%
TATGAGAAATACTCATGACC+AGG - chr4_2:54146422-54146441 None:intergenic 35.0%
GCTAAGATGAAAGGTGAAAT+TGG + chr4_2:54146500-54146519 Msa0607340:CDS 35.0%
! ATTGGTTCAAAATTGAGGGA+AGG + chr4_2:54146518-54146537 Msa0607340:CDS 35.0%
!! ATTGAACACTAGCTTTGCTA+AGG - chr4_2:54146850-54146869 None:intergenic 35.0%
GAAACAGTTGTGATCTATGT+TGG + chr4_2:54147115-54147134 Msa0607340:intron 35.0%
GCTGTACAAGAAACAAAAAG+AGG + chr4_2:54147244-54147263 Msa0607340:CDS 35.0%
AGCAATTCTGTATGAGAAGA+AGG + chr4_2:54147271-54147290 Msa0607340:CDS 35.0%
AGAGCTATACGCAAAGAAAA+AGG + chr4_2:54147361-54147380 Msa0607340:CDS 35.0%
AAACAACTACACAGCTGTAA+GGG + chr4_2:54147454-54147473 Msa0607340:CDS 35.0%
GATTGCTAAGATTAATGCTG+AGG + chr4_2:54147511-54147530 Msa0607340:CDS 35.0%
! ACTAATGGTGGTGATAATAG+TGG + chr4_2:54147569-54147588 Msa0607340:CDS 35.0%
TCATGGACAGTCTTAAACAA+AGG - chr4_2:54147659-54147678 None:intergenic 35.0%
TCTGACAAAAGCTCTTAATC+AGG + chr4_2:54147719-54147738 Msa0607340:exon 35.0%
ATCAGGATGATGCAAGTATT+AGG + chr4_2:54147736-54147755 Msa0607340:exon 35.0%
AGGTTTATAGTAGTGGTACT+TGG + chr4_2:54147756-54147775 Msa0607340:three_prime_UTR 35.0%
! ATAGTAGTGGTACTTGGTTT+TGG + chr4_2:54147762-54147781 Msa0607340:three_prime_UTR 35.0%
TGACATTTGAATCGAGCAGA+AGG + chr4_2:54138192-54138211 Msa0607340:five_prime_UTR 40.0%
ATTTGAATCGAGCAGAAGGA+AGG + chr4_2:54138196-54138215 Msa0607340:five_prime_UTR 40.0%
TTTGAATCGAGCAGAAGGAA+GGG + chr4_2:54138197-54138216 Msa0607340:five_prime_UTR 40.0%
ATGAAGGAAGTGAAATCGGA+TGG - chr4_2:54138379-54138398 None:intergenic 40.0%
ACGGAGGTAGAAAAAGATGA+AGG - chr4_2:54138395-54138414 None:intergenic 40.0%
TATCCAGATCAGAAATACGG+AGG - chr4_2:54138411-54138430 None:intergenic 40.0%
!! TTTAGAAAAGATGGTGGGGT+AGG + chr4_2:54138727-54138746 Msa0607340:intron 40.0%
GAGAGTAGAGTAGATCAGAT+GGG + chr4_2:54138762-54138781 Msa0607340:intron 40.0%
TGATGCCGTAGAAAAACTGT+AGG + chr4_2:54138810-54138829 Msa0607340:intron 40.0%
CCACCCAATTTCACCAAAAT+AGG - chr4_2:54139206-54139225 None:intergenic 40.0%
!!! CCTATTTTGGTGAAATTGGG+TGG + chr4_2:54139203-54139222 Msa0607340:intron 40.0%
AAATTATGCAAAGAGCCAGC+CGG + chr4_2:54139718-54139737 Msa0607340:CDS 40.0%
! TAAATTGGGAGCACAAGATG+GGG - chr4_2:54139932-54139951 None:intergenic 40.0%
! CATAAATTGGGAGCACAAGA+TGG - chr4_2:54139934-54139953 None:intergenic 40.0%
AACTGCCATGAGTAAGAGTT+GGG - chr4_2:54139977-54139996 None:intergenic 40.0%
ACAGCTAAGGCACGAATTAA+AGG - chr4_2:54140062-54140081 None:intergenic 40.0%
AAGGGGATCACATAGATACT+CGG - chr4_2:54140120-54140139 None:intergenic 40.0%
TCCCCTTCAAAGATGTCTAA+AGG + chr4_2:54140133-54140152 Msa0607340:CDS 40.0%
GCACCTTTAGACATCTTTGA+AGG - chr4_2:54140139-54140158 None:intergenic 40.0%
ATTCCGGTGACATTCGTATT+TGG + chr4_2:54140227-54140246 Msa0607340:intron 40.0%
AGTCCAAATACGAATGTCAC+CGG - chr4_2:54140233-54140252 None:intergenic 40.0%
!!! GGGTTTTTTGGAATCACTGA+AGG + chr4_2:54140378-54140397 Msa0607340:CDS 40.0%
ACAGCATTAGCAACAACCAT+TGG - chr4_2:54140424-54140443 None:intergenic 40.0%
TATAGTGCAACTCCTCTGAT+AGG + chr4_2:54140608-54140627 Msa0607340:intron 40.0%
! TCTGAAACAGTACCTATCAG+AGG - chr4_2:54140623-54140642 None:intergenic 40.0%
!! TTTTGGAGAGGATCTTAGAG+CGG - chr4_2:54140719-54140738 None:intergenic 40.0%
!!! GGACATCATTAGTTTTGGAG+AGG - chr4_2:54140731-54140750 None:intergenic 40.0%
GGAGCAGTTGAATAGTTAGT+TGG - chr4_2:54140915-54140934 None:intergenic 40.0%
GACAGTCAATATGAAATGGG+GGG - chr4_2:54140936-54140955 None:intergenic 40.0%
CGACAGTCAATATGAAATGG+GGG - chr4_2:54140937-54140956 None:intergenic 40.0%
GCGACAGTCAATATGAAATG+GGG - chr4_2:54140938-54140957 None:intergenic 40.0%
GAGCGACAGTCAATATGAAA+TGG - chr4_2:54140940-54140959 None:intergenic 40.0%
!! GTCGTTTAAGGTTTTCCACA+AGG - chr4_2:54141144-54141163 None:intergenic 40.0%
GAGGACAAGGTGAATGTTTA+GGG - chr4_2:54141224-54141243 None:intergenic 40.0%
TGAGGACAAGGTGAATGTTT+AGG - chr4_2:54141225-54141244 None:intergenic 40.0%
AACTCTTGATCTTAGAGGCA+GGG - chr4_2:54141338-54141357 None:intergenic 40.0%
TAACTCTTGATCTTAGAGGC+AGG - chr4_2:54141339-54141358 None:intergenic 40.0%
ACTTGGTTTCACTTACCAGA+TGG + chr4_2:54141663-54141682 Msa0607340:intron 40.0%
CTTGGTTTCACTTACCAGAT+GGG + chr4_2:54141664-54141683 Msa0607340:intron 40.0%
TTGGTTTCACTTACCAGATG+GGG + chr4_2:54141665-54141684 Msa0607340:intron 40.0%
TTGTAGAAAGAGTTACCCCA+CGG + chr4_2:54141753-54141772 Msa0607340:CDS 40.0%
CAATTGTGCAGTTGTACTGT+CGG + chr4_2:54141787-54141806 Msa0607340:CDS 40.0%
ATCACTAATCACATTCTGCC+TGG + chr4_2:54141886-54141905 Msa0607340:intron 40.0%
TAAATTGTGGTTAGCACACC+AGG - chr4_2:54141907-54141926 None:intergenic 40.0%
CCGGAATCTTTGCAAAAAGA+TGG + chr4_2:54141984-54142003 Msa0607340:CDS 40.0%
AGGGCAACATATTGTATCTC+AGG - chr4_2:54142042-54142061 None:intergenic 40.0%
AAACTAGGTCACCGGATTAT+GGG + chr4_2:54142166-54142185 Msa0607340:intron 40.0%
AGAACACCTACAGATAGAAC+AGG - chr4_2:54142228-54142247 None:intergenic 40.0%
TTCAGACCGAAATATAGACC+AGG + chr4_2:54142312-54142331 Msa0607340:CDS 40.0%
TAAAAAAAATGGGGAGGGGA+GGG - chr4_2:54142380-54142399 None:intergenic 40.0%
ATAAAAAAAATGGGGAGGGG+AGG - chr4_2:54142381-54142400 None:intergenic 40.0%
TTGTGAAAGGAAACCCTTGT+TGG - chr4_2:54142559-54142578 None:intergenic 40.0%
ACAAGGGTTTCCTTTCACAA+AGG + chr4_2:54142559-54142578 Msa0607340:intron 40.0%
TAAGGGAACTTCGCTAGATA+GGG - chr4_2:54142656-54142675 None:intergenic 40.0%
AAAAGAAAGGTGAGCCTGTT+AGG - chr4_2:54142712-54142731 None:intergenic 40.0%
! TGACCCATTGGTTACAACAT+TGG + chr4_2:54142862-54142881 Msa0607340:intron 40.0%
CTGCCAATGTTGTAACCAAT+GGG - chr4_2:54142868-54142887 None:intergenic 40.0%
!! ACAACATTGGCAGGTTTTGT+TGG + chr4_2:54142875-54142894 Msa0607340:intron 40.0%
!!! TTCTTTTTTTTGGGAGGTGG+GGG + chr4_2:54143123-54143142 Msa0607340:intron 40.0%
CGAGCTTCTTGAAAGTTTCT+TGG + chr4_2:54143409-54143428 Msa0607340:CDS 40.0%
TAGCTGTCAGCAATTGTAGT+TGG - chr4_2:54143463-54143482 None:intergenic 40.0%
TTTCCTTAAGAAGCCAACTG+AGG + chr4_2:54143493-54143512 Msa0607340:CDS 40.0%
TTCCTTAAGAAGCCAACTGA+GGG + chr4_2:54143494-54143513 Msa0607340:CDS 40.0%
AATTAGTTGAGGTGGATACC+TGG + chr4_2:54144206-54144225 Msa0607340:intron 40.0%
TAGGTATACAATCTACAGCC+AGG - chr4_2:54144227-54144246 None:intergenic 40.0%
TGATCATTTGTCTAGCCACA+TGG + chr4_2:54144340-54144359 Msa0607340:intron 40.0%
GACAAGCTAGGTACATCAAA+GGG - chr4_2:54144415-54144434 None:intergenic 40.0%
AGACAAGCTAGGTACATCAA+AGG - chr4_2:54144416-54144435 None:intergenic 40.0%
GAAGATGATGACTATCCTGA+TGG + chr4_2:54144614-54144633 Msa0607340:CDS 40.0%
AGCAGGATTTACAGATGACT+CGG - chr4_2:54144648-54144667 None:intergenic 40.0%
ATTGTATAGCTGGAAGTAGG+AGG - chr4_2:54144686-54144705 None:intergenic 40.0%
GGTATTGTATAGCTGGAAGT+AGG - chr4_2:54144689-54144708 None:intergenic 40.0%
! AGATGCAGGTATTGTATAGC+TGG - chr4_2:54144696-54144715 None:intergenic 40.0%
CTATACAATACCTGCATCTG+TGG + chr4_2:54144697-54144716 Msa0607340:CDS 40.0%
GTCTTTGTATGGCGTTAAAG+AGG + chr4_2:54145040-54145059 Msa0607340:intron 40.0%
CTTTGTATGGCGTTAAAGAG+GGG + chr4_2:54145042-54145061 Msa0607340:intron 40.0%
TTTGTATGGCGTTAAAGAGG+GGG + chr4_2:54145043-54145062 Msa0607340:intron 40.0%
GGGACTAAAACACAACTTCA+GGG + chr4_2:54145067-54145086 Msa0607340:intron 40.0%
TGGTCTTTGTATGGGGTTAA+AGG + chr4_2:54145107-54145126 Msa0607340:intron 40.0%
GGTCTTTGTATGGGGTTAAA+GGG + chr4_2:54145108-54145127 Msa0607340:intron 40.0%
GTCTTTGTATGGGGTTAAAG+GGG + chr4_2:54145109-54145128 Msa0607340:intron 40.0%
GGGACTAAAACACAACTTCA+GGG + chr4_2:54145067-54145086 Msa0607340:intron 40.0%
!!! ACGTTACTTTTTAGTTGGGG+AGG + chr4_2:54145196-54145215 Msa0607340:intron 40.0%
!!! CGTTACTTTTTAGTTGGGGA+GGG + chr4_2:54145197-54145216 Msa0607340:intron 40.0%
!!! GTTACTTTTTAGTTGGGGAG+GGG + chr4_2:54145198-54145217 Msa0607340:intron 40.0%
!!! TTACTTTTTAGTTGGGGAGG+GGG + chr4_2:54145199-54145218 Msa0607340:intron 40.0%
GTCCTTGTGGTAGAAATCAA+AGG + chr4_2:54145235-54145254 Msa0607340:intron 40.0%
CCTTGTGGTAGAAATCAAAG+GGG + chr4_2:54145237-54145256 Msa0607340:intron 40.0%
! GGTACTGAAACCCAATTTCA+GGG + chr4_2:54145264-54145283 Msa0607340:intron 40.0%
! ATGTTCACATGACTTTGGGA+TGG + chr4_2:54145507-54145526 Msa0607340:intron 40.0%
AAATCAGTGCACAGCTTACT+AGG + chr4_2:54145677-54145696 Msa0607340:CDS 40.0%
TGGATCATGAATCCATCAAG+TGG - chr4_2:54145754-54145773 None:intergenic 40.0%
AACGAGTTCATTAACGTGGT+TGG - chr4_2:54146228-54146247 None:intergenic 40.0%
CTTGAACGAGTTCATTAACG+TGG - chr4_2:54146232-54146251 None:intergenic 40.0%
CACGTTAATGAACTCGTTCA+AGG + chr4_2:54146230-54146249 Msa0607340:CDS 40.0%
TCGTTCAAGGAATCATCGAA+GGG + chr4_2:54146243-54146262 Msa0607340:CDS 40.0%
GTGTCAGAAGCTAAGATGAA+AGG + chr4_2:54146491-54146510 Msa0607340:CDS 40.0%
GAAAATTGATGCAGAGACGA+AGG + chr4_2:54146562-54146581 Msa0607340:CDS 40.0%
ACAAGGAGGGAATTAAAGTG+AGG + chr4_2:54146615-54146634 Msa0607340:CDS 40.0%
! TGAGTTGGCTAAGAAGAAAG+CGG + chr4_2:54146694-54146713 Msa0607340:CDS 40.0%
AGTTACAAGGTGAAGTTGAG+AGG + chr4_2:54146783-54146802 Msa0607340:CDS 40.0%
TGCTTGGACTAAACTAACCT+TGG - chr4_2:54146879-54146898 None:intergenic 40.0%
AAGCTGAAAAGTGAAAAGGC+TGG - chr4_2:54147086-54147105 None:intergenic 40.0%
TGTAGGTACAAGAAGCAAAC+TGG + chr4_2:54147219-54147238 Msa0607340:intron 40.0%
GTAGGTACAAGAAGCAAACT+GGG + chr4_2:54147220-54147239 Msa0607340:intron 40.0%
GCTATACGCAAAGAAAAAGG+AGG + chr4_2:54147364-54147383 Msa0607340:CDS 40.0%
ATACGCAAAGAAAAAGGAGG+CGG + chr4_2:54147367-54147386 Msa0607340:CDS 40.0%
AGTACACTTCTCAATGCACT+TGG + chr4_2:54147431-54147450 Msa0607340:CDS 40.0%
GAAACAACTACACAGCTGTA+AGG + chr4_2:54147453-54147472 Msa0607340:CDS 40.0%
ATTAATGCTGAGGCTATACG+CGG + chr4_2:54147521-54147540 Msa0607340:CDS 40.0%
! AATGGTGGTGATAATAGTGG+TGG + chr4_2:54147572-54147591 Msa0607340:CDS 40.0%
! AGTGGTGGTGATAAAACTGA+AGG + chr4_2:54147587-54147606 Msa0607340:CDS 40.0%
!! TGATAAAACTGAAGGTGCCA+TGG + chr4_2:54147595-54147614 Msa0607340:CDS 40.0%
AGCAACTTCTTTCATAGCCA+TGG - chr4_2:54147615-54147634 None:intergenic 40.0%
ATGGCTATGAAAGAAGTTGC+TGG + chr4_2:54147614-54147633 Msa0607340:CDS 40.0%
TGGACAGTCTTAAACAAAGG+TGG - chr4_2:54147656-54147675 None:intergenic 40.0%
ATGTCTGGGGAGGAAAAACT+TGG - chr4_2:54138172-54138191 None:intergenic 45.0%
TCAAATGTCAATGTCTGGGG+AGG - chr4_2:54138182-54138201 None:intergenic 45.0%
TACTTCTCCACCACGAAGAA+GGG + chr4_2:54138251-54138270 Msa0607340:CDS 45.0%
! CTACCTCCGTATTTCTGATC+TGG + chr4_2:54138405-54138424 Msa0607340:intron 45.0%
GGAGAGTAGAGTAGATCAGA+TGG + chr4_2:54138761-54138780 Msa0607340:intron 45.0%
GAGTAGATCAGATGGGTAGT+AGG + chr4_2:54138769-54138788 Msa0607340:intron 45.0%
ATGGGTAGTAGGCAAATCAC+TGG + chr4_2:54138780-54138799 Msa0607340:intron 45.0%
CTAATCCCACTAAGTGAGAC+AGG - chr4_2:54138907-54138926 None:intergenic 45.0%
! AGGATTGTGTGTAAGGTGTC+TGG + chr4_2:54139096-54139115 Msa0607340:intron 45.0%
! GGATTGTGTGTAAGGTGTCT+GGG + chr4_2:54139097-54139116 Msa0607340:intron 45.0%
TGTTCCCCAACTCTTACTCA+TGG + chr4_2:54139969-54139988 Msa0607340:intron 45.0%
ACTGCCATGAGTAAGAGTTG+GGG - chr4_2:54139976-54139995 None:intergenic 45.0%
CAACTGCCATGAGTAAGAGT+TGG - chr4_2:54139978-54139997 None:intergenic 45.0%
AACAATGGGATGCATTCGTG+TGG + chr4_2:54140085-54140104 Msa0607340:CDS 45.0%
ATGCAGAGTTAGTTGAGGAC+AGG + chr4_2:54140356-54140375 Msa0607340:CDS 45.0%
TGCAGAGTTAGTTGAGGACA+GGG + chr4_2:54140357-54140376 Msa0607340:CDS 45.0%
!!! AGTTGAGGACAGGGGTTTTT+TGG + chr4_2:54140366-54140385 Msa0607340:CDS 45.0%
GGTTGTTGCTAATGCTGTTG+CGG + chr4_2:54140426-54140445 Msa0607340:CDS 45.0%
TTTGGAGAGGATCTTAGAGC+GGG - chr4_2:54140718-54140737 None:intergenic 45.0%
GACTAGGTCACTCAAATACC+TGG - chr4_2:54140797-54140816 None:intergenic 45.0%
ATCTAAGAGGAGGAGAGACT+AGG - chr4_2:54140813-54140832 None:intergenic 45.0%
TTTGGAGAGGATCTAAGAGG+AGG - chr4_2:54140823-54140842 None:intergenic 45.0%
GTTAGGTAGTGAGAGATGGT+AGG - chr4_2:54140893-54140912 None:intergenic 45.0%
GTTGGTTAGGTAGTGAGAGA+TGG - chr4_2:54140897-54140916 None:intergenic 45.0%
ACTACAAGCTGTTCAGCTTG+AGG - chr4_2:54141243-54141262 None:intergenic 45.0%
GATGATGACAGCTGAAACAG+TGG - chr4_2:54141595-54141614 None:intergenic 45.0%
AAAGATGGGCAAGGAAAGAC+AGG - chr4_2:54141617-54141636 None:intergenic 45.0%
GGACGCTCTTTCTAGATACA+AGG + chr4_2:54141703-54141722 Msa0607340:CDS 45.0%
AATTGGCATGCTGTAACCGT+GGG - chr4_2:54141772-54141791 None:intergenic 45.0%
CGACAGTACAACTGCACAAT+TGG - chr4_2:54141789-54141808 None:intergenic 45.0%
! AGTTGTACTGTCGGCTGTTA+AGG + chr4_2:54141796-54141815 Msa0607340:CDS 45.0%
GAGAGTAATGTCACAAGAGG+AGG - chr4_2:54142012-54142031 None:intergenic 45.0%
GCTGAGAGTAATGTCACAAG+AGG - chr4_2:54142015-54142034 None:intergenic 45.0%
CAAACTAGGTCACCGGATTA+TGG + chr4_2:54142165-54142184 Msa0607340:intron 45.0%
ACAGGAGGCCCATAATCATT+TGG - chr4_2:54142210-54142229 None:intergenic 45.0%
ACACCTACAGATAGAACAGG+AGG - chr4_2:54142225-54142244 None:intergenic 45.0%
AGAAGAGAGGCTTTCCAACA+AGG + chr4_2:54142542-54142561 Msa0607340:intron 45.0%
GAAGAGAGGCTTTCCAACAA+GGG + chr4_2:54142543-54142562 Msa0607340:intron 45.0%
AAGGGAACTTCGCTAGATAG+GGG - chr4_2:54142655-54142674 None:intergenic 45.0%
GTAAGGGAACTTCGCTAGAT+AGG - chr4_2:54142657-54142676 None:intergenic 45.0%
CCTGCCAATGTTGTAACCAA+TGG - chr4_2:54142869-54142888 None:intergenic 45.0%
! CCATTGGTTACAACATTGGC+AGG + chr4_2:54142866-54142885 Msa0607340:intron 45.0%
AGAAAGGCTGTTCGTGCAAT+TGG + chr4_2:54142939-54142958 Msa0607340:CDS 45.0%
TTGTGAGAGCTTAGACACCT+TGG + chr4_2:54143233-54143252 Msa0607340:CDS 45.0%
ATCCACTTTCCTATCTGGAC+AGG + chr4_2:54143334-54143353 Msa0607340:intron 45.0%
TCATTGATGCCTGTCCAGAT+AGG - chr4_2:54143346-54143365 None:intergenic 45.0%
!! AATTGTAGTTGGACTAGCGC+AGG - chr4_2:54143452-54143471 None:intergenic 45.0%
CCACTTGAAGAAAGAGGGAA+AGG - chr4_2:54143721-54143740 None:intergenic 45.0%
CCTTTCCCTCTTTCTTCAAG+TGG + chr4_2:54143718-54143737 Msa0607340:intron 45.0%
CTGTGTGCGTTCACCATTAT+TGG + chr4_2:54143798-54143817 Msa0607340:intron 45.0%
TATGCACGATCTCGCAAATC+AGG - chr4_2:54144103-54144122 None:intergenic 45.0%
AGCTAGGTACATCAAAGGGA+GGG - chr4_2:54144411-54144430 None:intergenic 45.0%
AAGCTAGGTACATCAAAGGG+AGG - chr4_2:54144412-54144431 None:intergenic 45.0%
AGAAGCTCGTCAAGTAGAGA+AGG - chr4_2:54144509-54144528 None:intergenic 45.0%
TTCAGGGGGCTTGTGATAAA+CGG - chr4_2:54144555-54144574 None:intergenic 45.0%
TGCGGGTAACAAATGCTTCA+GGG - chr4_2:54144571-54144590 None:intergenic 45.0%
TAAATCCTGCTAATGGCCCT+GGG + chr4_2:54144657-54144676 Msa0607340:CDS 45.0%
TCACCAAGTAAATCTGGCAC+TGG - chr4_2:54144752-54144771 None:intergenic 45.0%
! ACTTGGTGATTTGATGGGCA+TGG + chr4_2:54144763-54144782 Msa0607340:CDS 45.0%
TTGTATGGCGTTAAAGAGGG+GGG + chr4_2:54145044-54145063 Msa0607340:intron 45.0%
GGGGACTAAAACACAACTTC+AGG + chr4_2:54145066-54145085 Msa0607340:intron 45.0%
TTTGTATGGGGTTAAAGGGG+CGG + chr4_2:54145112-54145131 Msa0607340:intron 45.0%
GGGGACTAAAACACAACTTC+AGG + chr4_2:54145066-54145085 Msa0607340:intron 45.0%
! CCCCTTTGATTTCTACCACA+AGG - chr4_2:54145240-54145259 None:intergenic 45.0%
TGTGGTAGAAATCAAAGGGG+CGG + chr4_2:54145240-54145259 Msa0607340:intron 45.0%
!! GGGTACTGAAACCCAATTTC+AGG + chr4_2:54145263-54145282 Msa0607340:intron 45.0%
AGTTGAAGCAGGCAGTACAA+CGG - chr4_2:54145644-54145663 None:intergenic 45.0%
ATGTGTAGTTTACCGGTGAG+AGG - chr4_2:54146073-54146092 None:intergenic 45.0%
AGGACCAATTGTGAAGACAG+CGG - chr4_2:54146141-54146160 None:intergenic 45.0%
GTTCATTAACGTGGTTGGAG+TGG - chr4_2:54146223-54146242 None:intergenic 45.0%
CTCGTTCAAGGAATCATCGA+AGG + chr4_2:54146242-54146261 Msa0607340:CDS 45.0%
CGTTCAAGGAATCATCGAAG+GGG + chr4_2:54146244-54146263 Msa0607340:CDS 45.0%
TTTGGGTCAAAAGACGCAGA+TGG + chr4_2:54146442-54146461 Msa0607340:CDS 45.0%
TGGAAGCCAAGAATCAAGCT+AGG + chr4_2:54146462-54146481 Msa0607340:CDS 45.0%
GGAAGCCAAGAATCAAGCTA+GGG + chr4_2:54146463-54146482 Msa0607340:CDS 45.0%
GTCAACCCTAGCTTGATTCT+TGG - chr4_2:54146471-54146490 None:intergenic 45.0%
GAAGGTTATTGCGATGCAGA+GGG + chr4_2:54146580-54146599 Msa0607340:CDS 45.0%
GAATCAAAGAGAGGCTGAAG+TGG + chr4_2:54146658-54146677 Msa0607340:CDS 45.0%
GGCTCAAGCTAATTCTGAGT+TGG + chr4_2:54146679-54146698 Msa0607340:CDS 45.0%
CTAAGGGAAGCTGAGTTACA+AGG + chr4_2:54146770-54146789 Msa0607340:CDS 45.0%
TCTGTATGAGAAGAAGGCAG+AGG + chr4_2:54147277-54147296 Msa0607340:CDS 45.0%
AAGACTGTCCATGAGCAAAC+AGG + chr4_2:54147665-54147684 Msa0607340:CDS 45.0%
!! ACAAAAAAAATAAAAAAAAT+GGG - chr4_2:54142390-54142409 None:intergenic 5.0%
!!! AAAAAAAATAAAAATCTTTT+TGG - chr4_2:54145395-54145414 None:intergenic 5.0%
!! CTTCGTGGTGGAGAAGTACT+TGG - chr4_2:54138249-54138268 None:intergenic 50.0%
GTACTTCTCCACCACGAAGA+AGG + chr4_2:54138250-54138269 Msa0607340:CDS 50.0%
GATTTCACCCTTCTTCGTGG+TGG - chr4_2:54138261-54138280 None:intergenic 50.0%
AGGGATTTCACCCTTCTTCG+TGG - chr4_2:54138264-54138283 None:intergenic 50.0%
GAAAACGGATCGGGATCTGA+GGG - chr4_2:54138328-54138347 None:intergenic 50.0%
AGAAAACGGATCGGGATCTG+AGG - chr4_2:54138329-54138348 None:intergenic 50.0%
GTGGGGTAGGTTCTGTAGTA+AGG + chr4_2:54138740-54138759 Msa0607340:intron 50.0%
GGTAGTAGGCAAATCACTGG+AGG + chr4_2:54138783-54138802 Msa0607340:intron 50.0%
ACTAAGTGAGACAGGCTGCA+TGG - chr4_2:54138899-54138918 None:intergenic 50.0%
ATGCAGCCTGTCTCACTTAG+TGG + chr4_2:54138898-54138917 Msa0607340:intron 50.0%
TGCAGCCTGTCTCACTTAGT+GGG + chr4_2:54138899-54138918 Msa0607340:intron 50.0%
GTGATTGCTGCTATGACGGT+TGG + chr4_2:54139605-54139624 Msa0607340:CDS 50.0%
TGCTGCTATGACGGTTGGAA+AGG + chr4_2:54139610-54139629 Msa0607340:CDS 50.0%
ACTGCGAGTATAGCAAGGTC+CGG - chr4_2:54139740-54139759 None:intergenic 50.0%
TGCCTTAGCTGTGCGAACAA+TGG + chr4_2:54140070-54140089 Msa0607340:CDS 50.0%
GCCTTAGCTGTGCGAACAAT+GGG + chr4_2:54140071-54140090 Msa0607340:CDS 50.0%
TCCCATTGTTCGCACAGCTA+AGG - chr4_2:54140075-54140094 None:intergenic 50.0%
GCTGCTGTCTTGCGAACATA+TGG - chr4_2:54140307-54140326 None:intergenic 50.0%
GCAGAGTTAGTTGAGGACAG+GGG + chr4_2:54140358-54140377 Msa0607340:CDS 50.0%
TTGGAGAGGATCTTAGAGCG+GGG - chr4_2:54140717-54140736 None:intergenic 50.0%
AGCTGTTCAGCTTGAGGACA+AGG - chr4_2:54141237-54141256 None:intergenic 50.0%
CAAACAGTGGGACCCTAACA+GGG - chr4_2:54141280-54141299 None:intergenic 50.0%
TCAAACAGTGGGACCCTAAC+AGG - chr4_2:54141281-54141300 None:intergenic 50.0%
ATTGGCATGCTGTAACCGTG+GGG - chr4_2:54141771-54141790 None:intergenic 50.0%
CAATTGGCATGCTGTAACCG+TGG - chr4_2:54141773-54141792 None:intergenic 50.0%
!! ACTCATCACCAGCACTGATG+TGG + chr4_2:54141960-54141979 Msa0607340:CDS 50.0%
TGCCTGTCCAGATAGGAAAG+TGG - chr4_2:54143339-54143358 None:intergenic 50.0%
CTGGACAGGCATCAATGATC+TGG + chr4_2:54143348-54143367 Msa0607340:intron 50.0%
GGACCTGAATCATCTGCTGT+GGG - chr4_2:54143520-54143539 None:intergenic 50.0%
AGGACCTGAATCATCTGCTG+TGG - chr4_2:54143521-54143540 None:intergenic 50.0%
GAAAGAGGGAAAGGACTGCA+CGG - chr4_2:54143712-54143731 None:intergenic 50.0%
AAACCTCAGGGTCAGTTGAG+AGG - chr4_2:54144141-54144160 None:intergenic 50.0%
! GTACCTAGCTTGTCTTCTCC+AGG + chr4_2:54144421-54144440 Msa0607340:intron 50.0%
TTGTCTTCTCCAGGCAGCTA+AGG + chr4_2:54144430-54144449 Msa0607340:intron 50.0%
CGTCAAGTAGAGAAGGATCG+AGG - chr4_2:54144502-54144521 None:intergenic 50.0%
CGGGTAACAAATGCTTCAGG+GGG - chr4_2:54144569-54144588 None:intergenic 50.0%
GCGGGTAACAAATGCTTCAG+GGG - chr4_2:54144570-54144589 None:intergenic 50.0%
GTGCGGGTAACAAATGCTTC+AGG - chr4_2:54144572-54144591 None:intergenic 50.0%
TGTTACCCGCACACTTGCTT+CGG + chr4_2:54144580-54144599 Msa0607340:CDS 50.0%
GACTCGGATTCACTTCCATC+AGG - chr4_2:54144632-54144651 None:intergenic 50.0%
GTAAATCCTGCTAATGGCCC+TGG + chr4_2:54144656-54144675 Msa0607340:CDS 50.0%
GCACCAGTGCCAGATTTACT+TGG + chr4_2:54144746-54144765 Msa0607340:CDS 50.0%
TGTATGGCGTTAAAGAGGGG+GGG + chr4_2:54145045-54145064 Msa0607340:intron 50.0%
TTGTATGGGGTTAAAGGGGC+GGG + chr4_2:54145113-54145132 Msa0607340:intron 50.0%
CATGTCATCTGTGGTCCTTG+TGG + chr4_2:54145222-54145241 Msa0607340:intron 50.0%
GTGGTAGAAATCAAAGGGGC+GGG + chr4_2:54145241-54145260 Msa0607340:intron 50.0%
TGGTAGAAATCAAAGGGGCG+GGG + chr4_2:54145242-54145261 Msa0607340:intron 50.0%
GTTGAAGCAGGCAGTACAAC+GGG - chr4_2:54145643-54145662 None:intergenic 50.0%
GTTGTACTGCCTGCTTCAAC+TGG + chr4_2:54145643-54145662 Msa0607340:CDS 50.0%
AAACCCTGACCAGTTGAAGC+AGG - chr4_2:54145655-54145674 None:intergenic 50.0%
TCAGTGCACAGCTTACTAGG+CGG + chr4_2:54145680-54145699 Msa0607340:CDS 50.0%
!! ACATTTGGTCTTGCAGCTGC+TGG + chr4_2:54145787-54145806 Msa0607340:CDS 50.0%
!! CATTTGGTCTTGCAGCTGCT+GGG + chr4_2:54145788-54145807 Msa0607340:CDS 50.0%
AAGACAGCGGGGAGAACAAA+AGG - chr4_2:54146128-54146147 None:intergenic 50.0%
GACCAATTGTGAAGACAGCG+GGG - chr4_2:54146139-54146158 None:intergenic 50.0%
GGACCAATTGTGAAGACAGC+GGG - chr4_2:54146140-54146159 None:intergenic 50.0%
CTTTCCTGATCGTCAACACG+AGG - chr4_2:54146161-54146180 None:intergenic 50.0%
GAAAACCTCCTCCATCGTCA+TGG - chr4_2:54146291-54146310 None:intergenic 50.0%
! ACGATGGAGGAGGTTTTCAG+AGG + chr4_2:54146293-54146312 Msa0607340:intron 50.0%
! TAGCAATTGGTGGATGTGCC+TGG + chr4_2:54146401-54146420 Msa0607340:intron 50.0%
CGAAGGTTATTGCGATGCAG+AGG + chr4_2:54146579-54146598 Msa0607340:CDS 50.0%
TGGCTAAGAAGAAAGCGGCT+TGG + chr4_2:54146699-54146718 Msa0607340:CDS 50.0%
GCAAAGAAAAAGGAGGCGGA+AGG + chr4_2:54147371-54147390 Msa0607340:CDS 50.0%
CGGAAGGAATTGCGACACTT+GGG + chr4_2:54147387-54147406 Msa0607340:CDS 50.0%
GCAACATGCCTGTTTGCTCA+TGG - chr4_2:54147676-54147695 None:intergenic 50.0%
ATGTTGCCTCCTGCTTGGAT+GGG + chr4_2:54147689-54147708 Msa0607340:CDS 50.0%
GATAAGGATCCCATCCAAGC+AGG - chr4_2:54147701-54147720 None:intergenic 50.0%
GAATCGAGCAGAAGGAAGGG+CGG + chr4_2:54138200-54138219 Msa0607340:five_prime_UTR 55.0%
AGGGCGGAGCAAAGATGAGT+CGG + chr4_2:54138216-54138235 Msa0607340:exon 55.0%
! TTGGGAGCACAAGATGGGGA+GGG - chr4_2:54139928-54139947 None:intergenic 55.0%
! ATTGGGAGCACAAGATGGGG+AGG - chr4_2:54139929-54139948 None:intergenic 55.0%
TGCGGCACTCGCTGAAATTC+AGG + chr4_2:54140444-54140463 Msa0607340:CDS 55.0%
TGGAGAGGATCTTAGAGCGG+GGG - chr4_2:54140716-54140735 None:intergenic 55.0%
!! TCACCAGCACTGATGTGGTC+CGG + chr4_2:54141965-54141984 Msa0607340:CDS 55.0%
ATTCCGGACCACATCAGTGC+TGG - chr4_2:54141971-54141990 None:intergenic 55.0%
GGGCCTCCTGTTCTATCTGT+AGG + chr4_2:54142219-54142238 Msa0607340:intron 55.0%
AAAAATGGGGAGGGGAGGGA+AGG - chr4_2:54142376-54142395 None:intergenic 55.0%
GAGGTGGGGGATAGAGAAGT+TGG + chr4_2:54143136-54143155 Msa0607340:intron 55.0%
! GGACTAGCGCAGGTTCTTCA+GGG - chr4_2:54143442-54143461 None:intergenic 55.0%
!! TGGACTAGCGCAGGTTCTTC+AGG - chr4_2:54143443-54143462 None:intergenic 55.0%
! GGCCCTCAGTTGGCTTCTTA+AGG - chr4_2:54143499-54143518 None:intergenic 55.0%
TCTCCTCTCAACTGACCCTG+AGG + chr4_2:54144135-54144154 Msa0607340:CDS 55.0%
CTGCCTGGAGAAGACAAGCT+AGG - chr4_2:54144427-54144446 None:intergenic 55.0%
ACACGACATCCTTAGCTGCC+TGG - chr4_2:54144442-54144461 None:intergenic 55.0%
TGGAAGTAGGAGGTGACCCA+GGG - chr4_2:54144676-54144695 None:intergenic 55.0%
GTATGGCGTTAAAGAGGGGG+GGG + chr4_2:54145046-54145065 Msa0607340:intron 55.0%
TATGGCGTTAAAGAGGGGGG+GGG + chr4_2:54145047-54145066 Msa0607340:intron 55.0%
TGTATGGGGTTAAAGGGGCG+GGG + chr4_2:54145114-54145133 Msa0607340:intron 55.0%
GGTAGAAATCAAAGGGGCGG+GGG + chr4_2:54145243-54145262 Msa0607340:intron 55.0%
TCCTCCTCTGTCCTGATTGC+AGG + chr4_2:54145608-54145627 Msa0607340:intron 55.0%
ACTGCCTGCTTCAACTGGTC+AGG + chr4_2:54145648-54145667 Msa0607340:CDS 55.0%
CTGCCTGCTTCAACTGGTCA+GGG + chr4_2:54145649-54145668 Msa0607340:CDS 55.0%
CAGTGCACAGCTTACTAGGC+GGG + chr4_2:54145681-54145700 Msa0607340:CDS 55.0%
AAGACGGTGCAGGATTGACC+GGG - chr4_2:54146047-54146066 None:intergenic 55.0%
CAAGACGGTGCAGGATTGAC+CGG - chr4_2:54146048-54146067 None:intergenic 55.0%
TACCGGTGAGAGGTCCAAGA+CGG - chr4_2:54146063-54146082 None:intergenic 55.0%
CTCCCCGCTGTCTTCACAAT+TGG + chr4_2:54146134-54146153 Msa0607340:CDS 55.0%
! TGGTCCTCGTGTTGACGATC+AGG + chr4_2:54146154-54146173 Msa0607340:CDS 55.0%
TGGTTGGAGTGGCGATCATG+AGG - chr4_2:54146212-54146231 None:intergenic 55.0%
TGCTTCCATGACGATGGAGG+AGG + chr4_2:54146283-54146302 Msa0607340:CDS 55.0%
GTTATTGCGATGCAGAGGGC+AGG + chr4_2:54146584-54146603 Msa0607340:CDS 55.0%
! GAAGAAAGCGGCTTGGACCA+AGG + chr4_2:54146706-54146725 Msa0607340:CDS 55.0%
GGCTGAAGTTGAGGCGAAGA+AGG + chr4_2:54146739-54146758 Msa0607340:CDS 55.0%
!! GAAGAAGGCCGTGGCTCTAA+GGG + chr4_2:54146754-54146773 Msa0607340:CDS 55.0%
CTCAGCTTCCCTTAGAGCCA+CGG - chr4_2:54146765-54146784 None:intergenic 55.0%
! GGCAGAAGCACAGAAAGCGT+CGG + chr4_2:54147298-54147317 Msa0607340:CDS 55.0%
GCGGAAGGAATTGCGACACT+TGG + chr4_2:54147386-54147405 Msa0607340:CDS 55.0%
GCGACACTTGGGAATGCTCA+AGG + chr4_2:54147398-54147417 Msa0607340:CDS 55.0%
CATGTTGCCTCCTGCTTGGA+TGG + chr4_2:54147688-54147707 Msa0607340:CDS 55.0%
AAGGATCCCATCCAAGCAGG+AGG - chr4_2:54147698-54147717 None:intergenic 55.0%
CGGATCGGGATCTGAGGGAA+AGG - chr4_2:54138323-54138342 None:intergenic 60.0%
CGAGTATAGCAAGGTCCGGC+TGG - chr4_2:54139736-54139755 None:intergenic 60.0%
GGAGAGGATCTTAGAGCGGG+GGG - chr4_2:54140715-54140734 None:intergenic 60.0%
CAAGGCTGCTGATGCACGTG+AGG + chr4_2:54141721-54141740 Msa0607340:CDS 60.0%
CTTGGCTTCGGGCTCATCCA+AGG - chr4_2:54143253-54143272 None:intergenic 60.0%
CTTGGATGAGCCCGAAGCCA+AGG + chr4_2:54143251-54143270 Msa0607340:CDS 60.0%
ATCTGCTGTGGGCCCTCAGT+TGG - chr4_2:54143509-54143528 None:intergenic 60.0%
GGGCCCACAGCAGATGATTC+AGG + chr4_2:54143514-54143533 Msa0607340:CDS 60.0%
TCTGGGCCGAAGCAAGTGTG+CGG - chr4_2:54144589-54144608 None:intergenic 60.0%
CTGGAAGTAGGAGGTGACCC+AGG - chr4_2:54144677-54144696 None:intergenic 60.0%
!! GAAGCTGGTGCCACAGATGC+AGG - chr4_2:54144710-54144729 None:intergenic 60.0%
GCAGAAGGTGGAGGTGAAGC+TGG - chr4_2:54144725-54144744 None:intergenic 60.0%
ACTGGTGCAGCAGAAGGTGG+AGG - chr4_2:54144734-54144753 None:intergenic 60.0%
!! TCTGGCACTGGTGCAGCAGA+AGG - chr4_2:54144740-54144759 None:intergenic 60.0%
ACCAGCCAGCTGCTCCTTCA+GGG + chr4_2:54144810-54144829 Msa0607340:CDS 60.0%
ACTCACCCTGAAGGAGCAGC+TGG - chr4_2:54144818-54144837 None:intergenic 60.0%
GTATGGGGTTAAAGGGGCGG+GGG + chr4_2:54145115-54145134 Msa0607340:intron 60.0%
GCCTGCAATCAGGACAGAGG+AGG - chr4_2:54145612-54145631 None:intergenic 60.0%
GAGGCCTGCAATCAGGACAG+AGG - chr4_2:54145615-54145634 None:intergenic 60.0%
GGCAAAGGAGGCCTGCAATC+AGG - chr4_2:54145622-54145641 None:intergenic 60.0%
GGCAGTACAACGGGCAAAGG+AGG - chr4_2:54145634-54145653 None:intergenic 60.0%
GCAGGCAGTACAACGGGCAA+AGG - chr4_2:54145637-54145656 None:intergenic 60.0%
GCACAGCTTACTAGGCGGGA+TGG + chr4_2:54145685-54145704 Msa0607340:CDS 60.0%
CGGTCAATCCTGCACCGTCT+TGG + chr4_2:54146046-54146065 Msa0607340:CDS 60.0%
TGAGAGGTCCAAGACGGTGC+AGG - chr4_2:54146057-54146076 None:intergenic 60.0%
CACCGTCTTGGACCTCTCAC+CGG + chr4_2:54146058-54146077 Msa0607340:CDS 60.0%
CCATCGTCATGGAAGCAGCG+AGG - chr4_2:54146280-54146299 None:intergenic 60.0%
CCTCGCTGCTTCCATGACGA+TGG + chr4_2:54146277-54146296 Msa0607340:CDS 60.0%
CGCTGCTTCCATGACGATGG+AGG + chr4_2:54146280-54146299 Msa0607340:CDS 60.0%
GCAGGAGAGGGTGACAAGGA+GGG + chr4_2:54146602-54146621 Msa0607340:CDS 60.0%
! GAAAGCGGCTTGGACCAAGG+CGG + chr4_2:54146709-54146728 Msa0607340:CDS 60.0%
GGCTCAGGTGGCTGAAGTTG+AGG + chr4_2:54146730-54146749 Msa0607340:CDS 60.0%
AGTTGAGGCGAAGAAGGCCG+TGG + chr4_2:54146745-54146764 Msa0607340:CDS 60.0%
! CGAAGAAGGCCGTGGCTCTA+AGG + chr4_2:54146753-54146772 Msa0607340:CDS 60.0%
CAGGCATGTTGCCTCCTGCT+TGG + chr4_2:54147684-54147703 Msa0607340:CDS 60.0%
CTGGGCCGAAGCAAGTGTGC+GGG - chr4_2:54144588-54144607 None:intergenic 65.0%
GGTGACCCAGGGCCATTAGC+AGG - chr4_2:54144665-54144684 None:intergenic 65.0%
!! GGCACTGGTGCAGCAGAAGG+TGG - chr4_2:54144737-54144756 None:intergenic 65.0%
! GGAGCAGCTGGCTGGTCAAG+AGG - chr4_2:54144806-54144825 None:intergenic 65.0%
GACCAGCCAGCTGCTCCTTC+AGG + chr4_2:54144809-54144828 Msa0607340:CDS 65.0%
ACCCTGAAGGAGCAGCTGGC+TGG - chr4_2:54144814-54144833 None:intergenic 65.0%
! GGGAGGGGGCATGTCATCTG+TGG + chr4_2:54145213-54145232 Msa0607340:intron 65.0%
TGCGATGCAGAGGGCAGGAG+AGG + chr4_2:54146589-54146608 Msa0607340:CDS 65.0%
GCGATGCAGAGGGCAGGAGA+GGG + chr4_2:54146590-54146609 Msa0607340:CDS 65.0%
GAGGGCAGGAGAGGGTGACA+AGG + chr4_2:54146598-54146617 Msa0607340:CDS 65.0%
GGCAGGAGAGGGTGACAAGG+AGG + chr4_2:54146601-54146620 Msa0607340:CDS 65.0%
TTGGACCAAGGCGGCTCAGG+TGG + chr4_2:54146718-54146737 Msa0607340:CDS 65.0%
TTCAGCCACCTGAGCCGCCT+TGG - chr4_2:54146726-54146745 None:intergenic 65.0%
GGCTTGGACCAAGGCGGCTC+AGG + chr4_2:54146715-54146734 Msa0607340:CDS 70.0%
TGCAGCTGCTGGGCCCCTGC+AGG + chr4_2:54145798-54145817 Msa0607340:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 54138128 54147949 54138128 ID=Msa0607340;Name=Msa0607340
chr4_2 mRNA 54138128 54147949 54138128 ID=Msa0607340-mRNA-1;Parent=Msa0607340;Name=Msa0607340-mRNA-1;_AED=0.08;_eAED=0.08;_QI=102|0.73|0.75|1|1|1|16|213|1160
chr4_2 exon 54138128 54138316 54138128 ID=Msa0607340-mRNA-1:exon:13489;Parent=Msa0607340-mRNA-1
chr4_2 exon 54139578 54139805 54139578 ID=Msa0607340-mRNA-1:exon:13490;Parent=Msa0607340-mRNA-1
chr4_2 exon 54140041 54140154 54140041 ID=Msa0607340-mRNA-1:exon:13491;Parent=Msa0607340-mRNA-1
chr4_2 exon 54140295 54140545 54140295 ID=Msa0607340-mRNA-1:exon:13492;Parent=Msa0607340-mRNA-1
chr4_2 exon 54141682 54141817 54141682 ID=Msa0607340-mRNA-1:exon:13493;Parent=Msa0607340-mRNA-1
chr4_2 exon 54141940 54142119 54141940 ID=Msa0607340-mRNA-1:exon:13494;Parent=Msa0607340-mRNA-1
chr4_2 exon 54142241 54142333 54142241 ID=Msa0607340-mRNA-1:exon:13495;Parent=Msa0607340-mRNA-1
chr4_2 exon 54142888 54143099 54142888 ID=Msa0607340-mRNA-1:exon:13496;Parent=Msa0607340-mRNA-1
chr4_2 exon 54143209 54143272 54143209 ID=Msa0607340-mRNA-1:exon:13497;Parent=Msa0607340-mRNA-1
chr4_2 exon 54143356 54143535 54143356 ID=Msa0607340-mRNA-1:exon:13498;Parent=Msa0607340-mRNA-1
chr4_2 exon 54144064 54144156 54144064 ID=Msa0607340-mRNA-1:exon:13499;Parent=Msa0607340-mRNA-1
chr4_2 exon 54144443 54144831 54144443 ID=Msa0607340-mRNA-1:exon:13500;Parent=Msa0607340-mRNA-1
chr4_2 exon 54145630 54145819 54145630 ID=Msa0607340-mRNA-1:exon:13501;Parent=Msa0607340-mRNA-1
chr4_2 exon 54146029 54146304 54146029 ID=Msa0607340-mRNA-1:exon:13502;Parent=Msa0607340-mRNA-1
chr4_2 exon 54146404 54146880 54146404 ID=Msa0607340-mRNA-1:exon:13503;Parent=Msa0607340-mRNA-1
chr4_2 exon 54147224 54147949 54147224 ID=Msa0607340-mRNA-1:exon:13504;Parent=Msa0607340-mRNA-1
chr4_2 five_prime_UTR 54138128 54138229 54138128 ID=Msa0607340-mRNA-1:five_prime_utr;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54138230 54138316 54138230 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54139578 54139805 54139578 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54140041 54140154 54140041 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54140295 54140545 54140295 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54141682 54141817 54141682 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54141940 54142119 54141940 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54142241 54142333 54142241 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54142888 54143099 54142888 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54143209 54143272 54143209 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54143356 54143535 54143356 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54144064 54144156 54144064 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54144443 54144831 54144443 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54145630 54145819 54145630 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54146029 54146304 54146029 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54146404 54146880 54146404 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 CDS 54147224 54147736 54147224 ID=Msa0607340-mRNA-1:cds;Parent=Msa0607340-mRNA-1
chr4_2 three_prime_UTR 54147737 54147949 54147737 ID=Msa0607340-mRNA-1:three_prime_utr;Parent=Msa0607340-mRNA-1
Gene Sequence

>Msa0607340

ATGAGTCGGAACGACTCCAAGTACTTCTCCACCACGAAGAAGGGTGAAATCCCTGAACTCAAAGAAGAGCTTAATTCTCAGTACAAGGATAAGAGAAAAGATGCAGTGAAAAAAGTGATTGCTGCTATGACGGTTGGAAAGGATGTGTCATCACTGTTTACAGATGTAGTGAATTGCATGCAAACAGAAAATTTGGAGCTGAAAAAGTTGGTATACTTGTATCTGATAAATTATGCAAAGAGCCAGCCGGACCTTGCTATACTCGCAGTAAATACATTTGTAAAGGTGAAAGCTCGAATGACCATTCTTTTGTCTGATTCACAAGATCCAAATCCTTTAATTCGTGCCTTAGCTGTGCGAACAATGGGATGCATTCGTGTGGATAAAATTACCGAGTATCTATGTGATCCCCTTCAAAGATGTCTAAAGGACGATGATCCATATGTTCGCAAGACAGCAGCCATTTGTGTTGCAAAGCTGTATGACATAAATGCAGAGTTAGTTGAGGACAGGGGTTTTTTGGAATCACTGAAGGATTTGATATCCGACAATAATCCAATGGTTGTTGCTAATGCTGTTGCGGCACTCGCTGAAATTCAGGACAATAGCACTAGACCCATCTTTGAGATCACTAGTCATACACTGTCAAAGCTCCTCACTGCATTAAATGAATGTACAGAATGGGGTCAAGTTTTTATACTGGACGCTCTTTCTAGATACAAGGCTGCTGATGCACGTGAGGCAGAAAACATTGTAGAAAGAGTTACCCCACGGTTACAGCATGCCAATTGTGCAGTTGTACTGTCGGCTGTTAAGATGATCCTTCAACAAATGGAACTCATCACCAGCACTGATGTGGTCCGGAATCTTTGCAAAAAGATGGCTCCTCCTCTTGTGACATTACTCTCAGCAGAACCTGAGATACAATATGTTGCCCTGCGAAATATCAATCTTATTGTACAAAGAAGGCCGACAATTCTTGCACATGAAATTAAGGTGTTCTTCTGCAAATACAATGATCCTATCTATGTGAAAATGGAGAAATTAGAAATCATGATAAAACTTGCTTCAGACCGAAATATAGACCAGGTTTTGTTGGAATTTAAGGAGTATGCTACTGAAGTTGACGTAGATTTTGTTAGAAAGGCTGTTCGTGCAATTGGTCGTTGTGCCATTAAATTAGAGAGAGCAGCTGAAAGATGCATTAGTGTTTTGCTAGAGCTGATCAAGATAAAAGTAAATTATGTGGTTCAAGAGGCAATCATTGTTATCAAAGACATATTTAGACGATACCCCAACACATATGAGTCCATAATTGCAACTCTTTGTGAGAGCTTAGACACCTTGGATGAGCCCGAAGCCAAGGCATCAATGATCTGGATAATTGGTGAATATGCGGAAAGAATTGACAATGCTGACGAGCTTCTTGAAAGTTTCTTGGAAAGTTTCCCTGAAGAACCTGCGCTAGTCCAACTACAATTGCTGACAGCTACTGTTAAACTTTTCCTTAAGAAGCCAACTGAGGGCCCACAGCAGATGATTCAGGTTGTTTTGAACAATGCGACTATGGAGACAGATAATCCTGATTTGCGAGATCGTGCATACATATATTGGCGTCTCCTCTCAACTGACCCTGAGGCAGCTAAGGATGTCGTGTTAGCTGAGAAGCCTGTGATAACTGATGACTCAAACAACCTCGATCCTTCTCTACTTGACGAGCTTCTAGTCAATATTGCTACATTATCTTCCGTTTATCACAAGCCCCCTGAAGCATTTGTTACCCGCACACTTGCTTCGGCCCAGAAAACTGAAGATGATGACTATCCTGATGGAAGTGAATCCGAGTCATCTGTAAATCCTGCTAATGGCCCTGGGTCACCTCCTACTTCCAGCTATACAATACCTGCATCTGTGGCACCAGCTTCACCTCCACCTTCTGCTGCACCAGTGCCAGATTTACTTGGTGATTTGATGGGCATGGATAATAGTTCTATTGTTCCTCTTGACCAGCCAGCTGCTCCTTCAGGGCCTCCTTTGCCCGTTGTACTGCCTGCTTCAACTGGTCAGGGTTTACAAATCAGTGCACAGCTTACTAGGCGGGATGGTCAAGTATTCTACAATATGTTATTTGAGAACAATTCTCAAGTTCCACTTGATGGATTCATGATCCAATTTAACAAGAACACATTTGGTCTTGCAGCTGCTGGGCCCCTGCAGAAAGCATGGATTTTTCCCGGTCAATCCTGCACCGTCTTGGACCTCTCACCGGTAAACTACACATTCGAAGTTCAAGCTATGAGTGCCGAGAAACTTCCTTTTGTTCTCCCCGCTGTCTTCACAATTGGTCCTCGTGTTGACGATCAGGAAAGCCTTCTCAAATATGCCAAACTTATTTCACCTCATGATCGCCACTCCAACCACGTTAATGAACTCGTTCAAGGAATCATCGAAGGGGAGACACGTGTCCTCGCTGCTTCCATGACGATGGAGGAGCAATTGGTGGATGTGCCTGGTCATGAGTATTTCTCATATTTGGGTCAAAAGACGCAGATGGAAGCCAAGAATCAAGCTAGGGTTGACGTGTCAGAAGCTAAGATGAAAGGTGAAATTGGTTCAAAATTGAGGGAAGGACAAACGCTGCAGAATGCAGCGAAAATTGATGCAGAGACGAAGGTTATTGCGATGCAGAGGGCAGGAGAGGGTGACAAGGAGGGAATTAAAGTGAGGAGTGAAGTGAAAGTTTATGAGAATCAAAGAGAGGCTGAAGTGGCTCAAGCTAATTCTGAGTTGGCTAAGAAGAAAGCGGCTTGGACCAAGGCGGCTCAGGTGGCTGAAGTTGAGGCGAAGAAGGCCGTGGCTCTAAGGGAAGCTGAGTTACAAGGTGAAGTTGAGAGGATGAATGCTTTGACTACTACTGAAAAGCTTAAAGCAGAGTTCCTTAGCAAAGCTAGTGTTCAATATGAAACCAAGGTACAAGAAGCAAACTGGGAGCTGTACAAGAAACAAAAAGAGGCTGAAGCAATTCTGTATGAGAAGAAGGCAGAGGCAGAAGCACAGAAAGCGTCGGCAGATGCAACATTTTATGCTCGCAAGCAAGAAGCTGAAGCAGAGCTATACGCAAAGAAAAAGGAGGCGGAAGGAATTGCGACACTTGGGAATGCTCAAGGAGCGTATGTAAGTACACTTCTCAATGCACTTGGAAACAACTACACAGCTGTAAGGGATTACTTGATGATAAATGGTGGCATGTTTCAAGAGATTGCTAAGATTAATGCTGAGGCTATACGCGGACTTGAGCCTAAGATTAGTATTTGGACTAATGGTGGTGATAATAGTGGTGGTGATAAAACTGAAGGTGCCATGGCTATGAAAGAAGTTGCTGGTGTCTACAAGATGTTGCCACCTTTGTTTAAGACTGTCCATGAGCAAACAGGCATGTTGCCTCCTGCTTGGATGGGATCCTTATCTGACAAAAGCTCTTAA
Protein sequence

>Msa0607340

MSRNDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKVKARMTILLSDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVANAVAALAEIQDNSTRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPALVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATMETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNNLDPSLLDELLVNIATLSSVYHKPPEAFVTRTLASAQKTEDDDYPDGSESESSVNPANGPGSPPTSSYTIPASVAPASPPPSAAPVPDLLGDLMGMDNSSIVPLDQPAAPSGPPLPVVLPASTGQGLQISAQLTRRDGQVFYNMLFENNSQVPLDGFMIQFNKNTFGLAAAGPLQKAWIFPGQSCTVLDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRVDDQESLLKYAKLISPHDRHSNHVNELVQGIIEGETRVLAASMTMEEQLVDVPGHEYFSYLGQKTQMEAKNQARVDVSEAKMKGEIGSKLREGQTLQNAAKIDAETKVIAMQRAGEGDKEGIKVRSEVKVYENQREAEVAQANSELAKKKAAWTKAAQVAEVEAKKAVALREAELQGEVERMNALTTTEKLKAEFLSKASVQYETKVQEANWELYKKQKEAEAILYEKKAEAEAQKASADATFYARKQEAEAELYAKKKEAEGIATLGNAQGAYVSTLLNALGNNYTAVRDYLMINGGMFQEIAKINAEAIRGLEPKISIWTNGGDNSGGDKTEGAMAMKEVAGVYKMLPPLFKTVHEQTGMLPPAWMGSLSDKSS*