AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1388790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1388790 MtrunA17_Chr8g0346721 99.174 969 8 0 1 969 1 969 0.0 1973
Msa1388790 MtrunA17_Chr6g0469661 74.829 731 182 2 1 729 1 731 0.0 1078
Msa1388790 MtrunA17_Chr7g0221671 26.984 252 155 8 18 262 13 242 2.91e-14 77.4
Msa1388790 MtrunA17_Chr1g0213861 25.506 247 161 5 18 262 11 236 8.32e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1388790 AT2G46520.1 68.557 970 298 3 1 965 1 968 0.0 1411
Msa1388790 AT3G59020.2 27.273 253 157 7 18 265 14 244 1.17e-15 82.4
Msa1388790 AT3G59020.1 27.273 253 157 7 18 265 14 244 1.35e-15 82.4
Msa1388790 AT2G31660.1 28.151 238 141 6 18 246 14 230 7.58e-15 80.1
Msa1388790 AT1G26170.1 21.326 558 337 14 6 511 5 512 7.99e-13 73.2

Find 285 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAATGAGGAGGAGTTTA+AGG 0.075617 tig0021182:-99043 Msa1388790:CDS
GATATTCAGTTCACTGTTTC+TGG 0.091376 tig0021182:-97531 Msa1388790:CDS
CGCCACCGGGTTTGCATTAA+AGG 0.121487 tig0021182:+98642 None:intergenic
TCGGCGTGGCGGCGGGGTTC+AGG 0.167402 tig0021182:+99834 None:intergenic
CGCCTTATGTTTCTCACATT+TGG 0.169130 tig0021182:-97613 Msa1388790:CDS
CTTGCTGTGTGGACTTTGTT+AGG 0.222365 tig0021182:-99000 Msa1388790:CDS
CAAGGATTGTGCGATATATT+TGG 0.232980 tig0021182:-98608 Msa1388790:CDS
CAAGCGGAAATGCAGGAAAT+TGG 0.242407 tig0021182:+95636 None:intergenic
CCGAATCTTAAGCTGATTAC+TGG 0.249866 tig0021182:-97422 Msa1388790:CDS
TTGTGAGTCTCCAGTACTTC+TGG 0.252989 tig0021182:-97354 Msa1388790:CDS
ATCCTGCAGCTTCTGCATCC+TGG 0.258895 tig0021182:-97331 Msa1388790:CDS
TGAGAATATTAATCTTTATA+TGG 0.266958 tig0021182:-99067 Msa1388790:CDS
TTCTGCATCCTGGGGTAAAA+TGG 0.284025 tig0021182:-97321 Msa1388790:CDS
CAGCTTTGTGCACAGTTCCC+TGG 0.284744 tig0021182:-97107 Msa1388790:CDS
CGAATTTGCATTGAGGGGTT+GGG 0.285078 tig0021182:-98124 Msa1388790:CDS
TTGAGAAGAAAAGAGAAGTT+TGG 0.287920 tig0021182:+99949 None:intergenic
TTCAGACTCTGGGAGCTTAA+AGG 0.289130 tig0021182:+98216 None:intergenic
GCCTTATGTTTCTCACATTT+GGG 0.308273 tig0021182:-97612 Msa1388790:CDS
TGAAGTGCCATTTGGTCTAT+TGG 0.316250 tig0021182:-95695 Msa1388790:three_prime_UTR
TCCCCTTGGCTGATCTCATT+TGG 0.319827 tig0021182:+97752 None:intergenic
AGAAGCGAGGGCCATGATTT+GGG 0.321584 tig0021182:+99537 None:intergenic
TTGCTCTTGTGGATGAGCTT+AGG 0.321661 tig0021182:-99101 Msa1388790:CDS
TGAATCATATTGAGTATATT+AGG 0.323794 tig0021182:-98795 Msa1388790:CDS
TCCTGCAGCTTCTGCATCCT+GGG 0.325044 tig0021182:-97330 Msa1388790:CDS
CCATGGTGAATGTGCGATTA+GGG 0.332349 tig0021182:+99919 None:intergenic
TGGCGGCGGGGTTCAGGGAG+AGG 0.333918 tig0021182:+99840 None:intergenic
TTCATCAGCATTGAGAAAAC+TGG 0.336053 tig0021182:+98253 None:intergenic
AAGAAGCGAGGGCCATGATT+TGG 0.336122 tig0021182:+99536 None:intergenic
ATGCAAACCCGGTGGCGAAT+TGG 0.341622 tig0021182:-98636 Msa1388790:CDS
AAGCGGAAATGCAGGAAATT+GGG 0.347791 tig0021182:+95637 None:intergenic
AGTCACAGAAATTGTGTTGT+AGG 0.352604 tig0021182:-99251 Msa1388790:CDS
GAAGTGCCATTTGGTCTATT+GGG 0.356405 tig0021182:-95694 Msa1388790:three_prime_UTR
ATCATGGCCCTCGCTTCTTC+CGG 0.357089 tig0021182:-99532 Msa1388790:CDS
GGAAGCATTCGGAGAGGAAT+TGG 0.359953 tig0021182:+99877 None:intergenic
GATTGCTTGTGAGTTGCTTA+AGG 0.364735 tig0021182:-98734 Msa1388790:CDS
AGCTTTGTGCACAGTTCCCT+GGG 0.366805 tig0021182:-97106 Msa1388790:CDS
GTATTGTGACACTTCTTTCT+CGG 0.370722 tig0021182:-97292 Msa1388790:CDS
CTACTGACTCAAACAGATAA+TGG 0.371221 tig0021182:+98053 None:intergenic
TCGTGACCAGCTTGCGGTTA+CGG 0.373029 tig0021182:-98956 Msa1388790:CDS
TCCCGGGGATCATTAATATC+TGG 0.373759 tig0021182:+97152 None:intergenic
AAATGTATTATGAGGGTTCT+TGG 0.376293 tig0021182:-98175 Msa1388790:CDS
ACCATTGATTGAAGCGTAAT+CGG 0.377577 tig0021182:+99473 None:intergenic
TGCTCTTGTGGATGAGCTTA+GGG 0.378445 tig0021182:-99100 Msa1388790:CDS
AGAGGATTCGGCGTGGCGGC+GGG 0.379976 tig0021182:+99827 None:intergenic
TGAGTATATTAGGAGGGATA+TGG 0.381340 tig0021182:-98785 Msa1388790:CDS
TCGAATTTGCATTGAGGGGT+TGG 0.382244 tig0021182:-98125 Msa1388790:CDS
AAGGGGATTGCTACGCGTTA+TGG 0.383164 tig0021182:-98715 Msa1388790:CDS
GCTTTACTGTCCGCCTTCTC+TGG 0.384838 tig0021182:+97570 None:intergenic
TGAAGACTAGCAACAAGTTC+CGG 0.387862 tig0021182:+99513 None:intergenic
AGAGCATGAGAGGTACGATT+AGG 0.389704 tig0021182:+99625 None:intergenic
AAAATCGCACTAAATATATC+AGG 0.393109 tig0021182:+97461 None:intergenic
CAGGGAACTGTGCACAAAGC+TGG 0.393904 tig0021182:+97108 None:intergenic
GATTATACCGCAGATTTGTC+AGG 0.398128 tig0021182:-98872 Msa1388790:CDS
TGCTGATGGTCTTGCTCTTG+TGG 0.398506 tig0021182:-99112 Msa1388790:CDS
CTTGTTGCTAGTCTTCAAAA+AGG 0.400301 tig0021182:-99507 Msa1388790:CDS
ATGCAGGAAATTGGGGAAAG+GGG 0.403420 tig0021182:+95645 None:intergenic
CGGCGTGGCGGCGGGGTTCA+GGG 0.404169 tig0021182:+99835 None:intergenic
CATAGTTTGTTTGCGGCCGA+TGG 0.405046 tig0021182:-98895 Msa1388790:CDS
TCCGATTACGCTTCAATCAA+TGG 0.406354 tig0021182:-99474 Msa1388790:CDS
GCAAGGAAACGAACCAAATC+AGG 0.407252 tig0021182:+98382 None:intergenic
TCCATGGTGAATGTGCGATT+AGG 0.408488 tig0021182:+99918 None:intergenic
ATGAATGGATGGGTGAGTTT+AGG 0.409263 tig0021182:-99173 Msa1388790:CDS
TGCCCTTGTGCGTCTACTCC+AGG 0.410838 tig0021182:-97792 Msa1388790:CDS
GCTTGATTTGAAGTATTGTT+TGG 0.411121 tig0021182:-99385 Msa1388790:CDS
ATGTTATGAAATGTATTATG+AGG 0.413049 tig0021182:-98183 Msa1388790:CDS
GAGCATGAGAGGTACGATTA+GGG 0.413296 tig0021182:+99626 None:intergenic
TTGCTGTGTGGACTTTGTTA+GGG 0.413943 tig0021182:-98999 Msa1388790:CDS
GAGAGGATTCGGCGTGGCGG+CGG 0.414397 tig0021182:+99826 None:intergenic
TCTGCAATATCTGGCATGTC+AGG 0.421184 tig0021182:+97242 None:intergenic
GTTTAAGAGTTTCCAGTGGT+GGG 0.421941 tig0021182:+99283 None:intergenic
TAAGATTCGGAATCCAGAAC+TGG 0.422640 tig0021182:+97435 None:intergenic
TCCTCCCTCAACCTCACATT+CGG 0.426403 tig0021182:+98838 None:intergenic
TCAAATATCTGCATGTAGAT+TGG 0.426703 tig0021182:+97860 None:intergenic
TCTCTTGAGGGGAGTGCTGA+TGG 0.427391 tig0021182:-99126 Msa1388790:CDS
GGCGGAGGAGAGAGAGGATT+CGG 0.429321 tig0021182:+99815 None:intergenic
GTTAGGTTGGGAGGAGGCGG+AGG 0.429322 tig0021182:+99800 None:intergenic
GAAGTTAGGTTGGGAGGAGG+CGG 0.430922 tig0021182:+99797 None:intergenic
GTCAAATATGCCAAGTACTT+TGG 0.431949 tig0021182:+97721 None:intergenic
GGAGGAGGCGGAGGAGAGAG+AGG 0.432967 tig0021182:+99809 None:intergenic
TGAGAAGAAAAGAGAAGTTT+GGG 0.433876 tig0021182:+99950 None:intergenic
AGGACGGCGAGGGCGAAGTT+AGG 0.434374 tig0021182:+99783 None:intergenic
CGGCGAGGGCGAAGTTAGGT+TGG 0.440463 tig0021182:+99787 None:intergenic
ATTGCTTGTGAGTTGCTTAA+GGG 0.442178 tig0021182:-98733 Msa1388790:CDS
GCTGCAGGATCCAGAAGTAC+TGG 0.443966 tig0021182:+97344 None:intergenic
CATGCATGCCTTTGAGCAAA+TGG 0.445037 tig0021182:-95608 Msa1388790:three_prime_UTR
CGTGATTCCCGATGATAGCT+AGG 0.445613 tig0021182:+99565 None:intergenic
TCCTTCCAGCATTGTAAAGT+TGG 0.446082 tig0021182:+97192 None:intergenic
TTGTCCTTCCAATTCGCCAC+CGG 0.447945 tig0021182:+98628 None:intergenic
CATGTGTTTGAAGTGCCATT+TGG 0.453119 tig0021182:-95703 Msa1388790:three_prime_UTR
TTAATTCTCAGGATCTGTGC+TGG 0.454020 tig0021182:-95928 Msa1388790:intron
TTCGTCCAACTTTACAATGC+TGG 0.457686 tig0021182:-97197 Msa1388790:CDS
AGAGGAATTGGAGAGTTTGT+TGG 0.459131 tig0021182:+99889 None:intergenic
GAATTTGCATTGAGGGGTTG+GGG 0.459250 tig0021182:-98123 Msa1388790:CDS
TGTCCTTCCAATTCGCCACC+GGG 0.461059 tig0021182:+98629 None:intergenic
CCCGATGATAGCTAGGGCTT+CGG 0.461908 tig0021182:+99572 None:intergenic
GGGCTTCGGAGAGCTGAGAT+TGG 0.462047 tig0021182:+99586 None:intergenic
TTATTTCAAGCCGAGGGAAA+AGG 0.463307 tig0021182:+97969 None:intergenic
TACTGATTCTCTTCAGACTC+TGG 0.463688 tig0021182:+98205 None:intergenic
TAAAATCCCAATAGACCAAA+TGG 0.464525 tig0021182:+95688 None:intergenic
TTGAGGATCATATGAATGAA+TGG 0.467479 tig0021182:-99188 Msa1388790:CDS
AGTTTGTTGGTTCCATTCCA+TGG 0.468298 tig0021182:+99902 None:intergenic
CAGGGAGAGGAGAGAGAGTG+TGG 0.469257 tig0021182:+99853 None:intergenic
CCAGTAATCAGCTTAAGATT+CGG 0.472206 tig0021182:+97422 None:intergenic
TTTCTCGGCAAGAACAAGAC+AGG 0.475623 tig0021182:-97277 Msa1388790:CDS
TGTTCATCATAGTTTGTTTG+CGG 0.478214 tig0021182:-98902 Msa1388790:CDS
TAGTAAAGGACGAGGGTGGC+AGG 0.478712 tig0021182:-98303 Msa1388790:CDS
TGCTCAACAAGCGGAAATGC+AGG 0.478829 tig0021182:+95629 None:intergenic
GAGAGTGTGGAGGAAGCATT+CGG 0.480598 tig0021182:+99866 None:intergenic
TGGAGTAGACGCACAAGGGC+AGG 0.484502 tig0021182:+97794 None:intergenic
CTCAGGATCTGTGCTGGGAT+GGG 0.485325 tig0021182:-95922 Msa1388790:intron
TCTACAAAGAAGGCTGCAAC+CGG 0.487821 tig0021182:-98574 Msa1388790:CDS
AGTAGCCGGTCTTGTGAAGC+GGG 0.488425 tig0021182:-98035 Msa1388790:CDS
CTCAAACAGATAATGGTTGA+AGG 0.488910 tig0021182:+98060 None:intergenic
AACCACTCAAATGTTGCAAA+AGG 0.489513 tig0021182:+95872 None:intergenic
AGTGCACCTGCCTTAAGCAT+TGG 0.489711 tig0021182:+98463 None:intergenic
GTTGCTCGAATTTGCATTGA+GGG 0.490878 tig0021182:-98130 Msa1388790:CDS
TTAAGAGTTTCCAGTGGTGG+GGG 0.492506 tig0021182:+99285 None:intergenic
ACTAGTTATCCTTCTCTTGA+GGG 0.494715 tig0021182:-99138 Msa1388790:CDS
AAGATCTGTGGAGACATAAC+CGG 0.495143 tig0021182:+98555 None:intergenic
TTTAAGAGTTTCCAGTGGTG+GGG 0.502566 tig0021182:+99284 None:intergenic
AGCAACGCTGTCTGATTCAC+AGG 0.503224 tig0021182:+97050 None:intergenic
CTTTGGTCAGTCTATCCCCT+TGG 0.503293 tig0021182:+97738 None:intergenic
ATCACGATTTCCCCAAATCA+TGG 0.503511 tig0021182:-99548 Msa1388790:CDS
TGGAGACTCACAAATGAGTC+TGG 0.504113 tig0021182:+97364 None:intergenic
TAATTCTCAGGATCTGTGCT+GGG 0.504229 tig0021182:-95927 Msa1388790:intron
TGCATGTAGATTGGTGGGAT+GGG 0.505019 tig0021182:+97869 None:intergenic
CCCAATCCTCGATTCCGAAA+AGG 0.505753 tig0021182:-99661 Msa1388790:CDS
GAATGAGTATCCAATGCTTA+AGG 0.506930 tig0021182:-98473 Msa1388790:CDS
TCTCAGGATCTGTGCTGGGA+TGG 0.508425 tig0021182:-95923 Msa1388790:intron
TGAGAAACTCTTAATAGTAA+AGG 0.508710 tig0021182:-98317 Msa1388790:CDS
AGGGAACTGTGCACAAAGCT+GGG 0.510033 tig0021182:+97109 None:intergenic
GCATCAAGCACTTCTGATCA+AGG 0.510248 tig0021182:-97686 Msa1388790:CDS
GAGGGTGGCAGGCTACGTTA+TGG 0.511357 tig0021182:-98292 Msa1388790:CDS
TGTGGATGAGCTTAGGGCTG+CGG 0.511547 tig0021182:-99094 Msa1388790:CDS
GCAAGTAACTGAAATGCGTA+TGG 0.512567 tig0021182:+97917 None:intergenic
TACTAGTTATCCTTCTCTTG+AGG 0.515638 tig0021182:-99139 Msa1388790:CDS
GGCGAGGGCGAAGTTAGGTT+GGG 0.516568 tig0021182:+99788 None:intergenic
TGGGATTGAGCATTACTGTC+TGG 0.518638 tig0021182:-95903 Msa1388790:three_prime_UTR
ACAGATAATGGTTGAAGGTG+GGG 0.520696 tig0021182:+98065 None:intergenic
ATGACTTGAGGGAACCTCCC+AGG 0.521093 tig0021182:+97089 None:intergenic
TTCCAGATATTAATGATCCC+CGG 0.522021 tig0021182:-97154 Msa1388790:CDS
CCAGATATTGCAGAAAATGT+AGG 0.524692 tig0021182:-97233 Msa1388790:CDS
AATGCAGGAAATTGGGGAAA+GGG 0.526890 tig0021182:+95644 None:intergenic
CATTTGCAGTGATGACTTGA+GGG 0.527183 tig0021182:+97078 None:intergenic
CCGAAGCCCTAGCTATCATC+GGG 0.527980 tig0021182:-99572 Msa1388790:CDS
CCCCAGGATGCAGAAGCTGC+AGG 0.528376 tig0021182:+97329 None:intergenic
TCCGAAGCCCTAGCTATCAT+CGG 0.530404 tig0021182:-99573 Msa1388790:CDS
GACGAGACGGAGGACGGCGA+GGG 0.536397 tig0021182:+99773 None:intergenic
ACTCCAGGCCTTCCTTCAAA+AGG 0.538342 tig0021182:-97777 Msa1388790:CDS
TCACTGTTTCTGGTTAAGCA+TGG 0.538604 tig0021182:-97521 Msa1388790:CDS
AACAGATAATGGTTGAAGGT+GGG 0.538694 tig0021182:+98064 None:intergenic
GGTCTCTCTTTCTACAAAGA+AGG 0.540099 tig0021182:-98584 Msa1388790:CDS
ATAGTTTGTTTGCGGCCGAT+GGG 0.540550 tig0021182:-98894 Msa1388790:CDS
TCTTTATATGGAGAAGAATG+AGG 0.540847 tig0021182:-99055 Msa1388790:CDS
GGTTTAAGAGTTTCCAGTGG+TGG 0.540962 tig0021182:+99282 None:intergenic
GATAGACTGACCAAAGTACT+TGG 0.541303 tig0021182:-97731 Msa1388790:CDS
AGTTGACGGCAGCGGCTTGA+CGG 0.542493 tig0021182:+99724 None:intergenic
CTGCATGTAGATTGGTGGGA+TGG 0.546010 tig0021182:+97868 None:intergenic
GCCCAAATGTGAGAAACATA+AGG 0.547648 tig0021182:+97611 None:intergenic
AACTAATGCTCGGTTGTAAG+TGG 0.547807 tig0021182:+97016 None:intergenic
GGATCATATGAATGAATGGA+TGG 0.549813 tig0021182:-99184 Msa1388790:CDS
ATGTAGATTGGTGGGATGGG+TGG 0.550873 tig0021182:+97872 None:intergenic
TCCAGATATTAATGATCCCC+GGG 0.552430 tig0021182:-97153 Msa1388790:CDS
TCAAATGTTGCAAAAGGCTG+AGG 0.555939 tig0021182:+95878 None:intergenic
ACATTTGCAGTGATGACTTG+AGG 0.556182 tig0021182:+97077 None:intergenic
TGTTATGAAATGTATTATGA+GGG 0.556990 tig0021182:-98182 Msa1388790:CDS
GGTTATCTTCAGCGGACCAA+CGG 0.558438 tig0021182:+99682 None:intergenic
AATATCTGCATGTAGATTGG+TGG 0.558745 tig0021182:+97863 None:intergenic
GCAGAAGTATACTCGAAAGT+AGG 0.559104 tig0021182:+95837 None:intergenic
TTGCTTGTGAGTTGCTTAAG+GGG 0.562415 tig0021182:-98732 Msa1388790:CDS
CAGTAGCCGGTCTTGTGAAG+CGG 0.563321 tig0021182:-98036 Msa1388790:CDS
TGATTCCGAATGTGAGGTTG+AGG 0.563458 tig0021182:-98843 Msa1388790:CDS
CGGACCAACGGAGACGGAGG+TGG 0.565978 tig0021182:+99694 None:intergenic
GGCGAAGTTAGGTTGGGAGG+AGG 0.567027 tig0021182:+99794 None:intergenic
ACGGATCTGATCGGAGATGG+AGG 0.567473 tig0021182:+99743 None:intergenic
TTGACGGATCTGATCGGAGA+TGG 0.567532 tig0021182:+99740 None:intergenic
TGTGAAGCGGGCTTCTGAGA+GGG 0.568121 tig0021182:-98023 Msa1388790:CDS
AGCGGAAATGCAGGAAATTG+GGG 0.572270 tig0021182:+95638 None:intergenic
ACTGATTCTCTTCAGACTCT+GGG 0.573743 tig0021182:+98206 None:intergenic
GAGTATCCAATGCTTAAGGC+AGG 0.575297 tig0021182:-98469 Msa1388790:CDS
ATATTTAAGTAAATGTCAGA+AGG 0.575750 tig0021182:-95549 Msa1388790:three_prime_UTR
TATCTGTTTGAGTCAGTAGC+CGG 0.575956 tig0021182:-98049 Msa1388790:CDS
ATGAGAATAACAGTAAATCT+CGG 0.576138 tig0021182:+95741 None:intergenic
AGAACAAGACAGGGTTGAGG+AGG 0.576975 tig0021182:-97267 Msa1388790:CDS
ATTATACCGCAGATTTGTCA+GGG 0.577085 tig0021182:-98871 Msa1388790:CDS
TCGCACTAAATATATCAGGC+TGG 0.577096 tig0021182:+97465 None:intergenic
GGATTGTGCGATATATTTGG+TGG 0.577400 tig0021182:-98605 Msa1388790:CDS
TTCAGCGACGAGACGGAGGA+CGG 0.581545 tig0021182:+99767 None:intergenic
TATCAAAAGAAGTAGCATTG+AGG 0.583401 tig0021182:-98411 Msa1388790:CDS
ATCGCACATTCACCATGGAA+TGG 0.583806 tig0021182:-99914 Msa1388790:exon
AGAAGCCCGCTTCACAAGAC+CGG 0.584077 tig0021182:+98030 None:intergenic
AATCACTGCCATTTGCTCAA+AGG 0.584363 tig0021182:+95600 None:intergenic
ATCATATTGAGTATATTAGG+AGG 0.584593 tig0021182:-98792 Msa1388790:CDS
AATTTCTGTGACTCGAAAAG+CGG 0.584834 tig0021182:+99261 None:intergenic
GAAGCGAGGGCCATGATTTG+GGG 0.585140 tig0021182:+99538 None:intergenic
GACAGTATTATTTCAAGCCG+AGG 0.585780 tig0021182:+97962 None:intergenic
AGTGAGTGTGAAATATATAA+CGG 0.586562 tig0021182:+99985 None:intergenic
TTTGGTTCGTTTCCTTGCTG+CGG 0.587294 tig0021182:-98377 Msa1388790:CDS
CGCGTCGTTGATTGACGCTG+CGG 0.589913 tig0021182:-99322 Msa1388790:CDS
GAGGATTCGGCGTGGCGGCG+GGG 0.590284 tig0021182:+99828 None:intergenic
CGACGAGACGGAGGACGGCG+AGG 0.590663 tig0021182:+99772 None:intergenic
GAGGTTGAGGGAGGATGATG+AGG 0.591211 tig0021182:-98830 Msa1388790:CDS
TGCATCCTGGGGTAAAATGG+TGG 0.591851 tig0021182:-97318 Msa1388790:CDS
TAATTGCCGTAACCGCAAGC+TGG 0.592087 tig0021182:+98950 None:intergenic
TCAGCACTCCCCTCAAGAGA+AGG 0.592983 tig0021182:+99129 None:intergenic
AGGCCTGGAGTAGACGCACA+AGG 0.593702 tig0021182:+97789 None:intergenic
GGGATCATTAATATCTGGAA+GGG 0.594843 tig0021182:+97157 None:intergenic
AAACTGACTAAAATTAAACA+TGG 0.595245 tig0021182:+95510 None:intergenic
AAACAGATAATGGTTGAAGG+TGG 0.595794 tig0021182:+98063 None:intergenic
AACTTACTCAAACTAATGCT+CGG 0.596616 tig0021182:+97006 None:intergenic
TGACTTGAGGGAACCTCCCA+GGG 0.597802 tig0021182:+97090 None:intergenic
GTATACTCGAAAGTAGGCAG+AGG 0.598469 tig0021182:+95843 None:intergenic
AACAAGTTCCGGAAGAAGCG+AGG 0.599510 tig0021182:+99524 None:intergenic
GGAGAGGAGAGAGAGTGTGG+AGG 0.600742 tig0021182:+99856 None:intergenic
AAATGCAGGAAATTGGGGAA+AGG 0.601789 tig0021182:+95643 None:intergenic
TGGAGGGTTCAGCGACGAGA+CGG 0.603655 tig0021182:+99760 None:intergenic
GGATCATTAATATCTGGAAG+GGG 0.603768 tig0021182:+97158 None:intergenic
AAGCTCCTTTAATGCAAACC+CGG 0.603899 tig0021182:-98647 Msa1388790:CDS
ACAAGTTCCGGAAGAAGCGA+GGG 0.604193 tig0021182:+99525 None:intergenic
CGGATCTGATCGGAGATGGA+GGG 0.605850 tig0021182:+99744 None:intergenic
TGCAGGAAATTGGGGAAAGG+GGG 0.607711 tig0021182:+95646 None:intergenic
TTAGAGAGCTCCAGAGAAGG+CGG 0.607962 tig0021182:-97580 Msa1388790:CDS
TTCTCGGCAAGAACAAGACA+GGG 0.608184 tig0021182:-97276 Msa1388790:CDS
TCATATTGAGTATATTAGGA+GGG 0.608345 tig0021182:-98791 Msa1388790:CDS
GCACCAAATGAGATCAGCCA+AGG 0.608644 tig0021182:-97755 Msa1388790:CDS
AGCGGCTTGACGGATCTGAT+CGG 0.609749 tig0021182:+99734 None:intergenic
TATATTAGGAGGGATATGGA+AGG 0.611021 tig0021182:-98781 Msa1388790:CDS
CCCTAATCGCACATTCACCA+TGG 0.613496 tig0021182:-99919 Msa1388790:exon
TTGGTGGCGGAGAGCATGAG+AGG 0.615233 tig0021182:+99615 None:intergenic
AAAACCACCTCCGTCTCCGT+TGG 0.615604 tig0021182:-99698 Msa1388790:CDS
TTGTGAAGCGGGCTTCTGAG+AGG 0.615980 tig0021182:-98024 Msa1388790:CDS
TGTTGCTCGAATTTGCATTG+AGG 0.616016 tig0021182:-98131 Msa1388790:CDS
ACTAAATATATCAGGCTGGA+CGG 0.616909 tig0021182:+97469 None:intergenic
CTAGTTATCCTTCTCTTGAG+GGG 0.618255 tig0021182:-99137 Msa1388790:CDS
ACTCTTAATAGTAAAGGACG+AGG 0.618274 tig0021182:-98311 Msa1388790:CDS
GTGATCTTGATACAAGGAGG+AGG 0.620319 tig0021182:-98756 Msa1388790:CDS
GATTCCGAATGTGAGGTTGA+GGG 0.620733 tig0021182:-98842 Msa1388790:CDS
ACAGTATTATTTCAAGCCGA+GGG 0.621118 tig0021182:+97963 None:intergenic
CAAGTAACTGAAATGCGTAT+GGG 0.621742 tig0021182:+97918 None:intergenic
CTTCAGCGGACCAACGGAGA+CGG 0.622307 tig0021182:+99688 None:intergenic
CACCAAATGAGATCAGCCAA+GGG 0.623350 tig0021182:-97754 Msa1388790:CDS
ATTGTAAAGTTGGACGAAGG+TGG 0.623656 tig0021182:+97202 None:intergenic
ATATCTGCATGTAGATTGGT+GGG 0.627188 tig0021182:+97864 None:intergenic
TTGAACATCAACAAGATCTG+TGG 0.627448 tig0021182:+98543 None:intergenic
TATTTAAGTAAATGTCAGAA+GGG 0.628117 tig0021182:-95548 Msa1388790:three_prime_UTR
GAGGATTGGGTTATCTTCAG+CGG 0.631308 tig0021182:+99674 None:intergenic
TTTGTGCACAGTTCCCTGGG+AGG 0.632283 tig0021182:-97103 Msa1388790:CDS
TCCAACTTTACAATGCTGGA+AGG 0.632984 tig0021182:-97193 Msa1388790:CDS
AAACCCGGTGGCGAATTGGA+AGG 0.633015 tig0021182:-98632 Msa1388790:CDS
CCTGCAGCTTCTGCATCCTG+GGG 0.635126 tig0021182:-97329 Msa1388790:CDS
AGGCATGCATGCTCAACAAG+CGG 0.635282 tig0021182:+95620 None:intergenic
AAGGTAGTGATCTTGATACA+AGG 0.638914 tig0021182:-98762 Msa1388790:CDS
GTGATTCCCGATGATAGCTA+GGG 0.638935 tig0021182:+99566 None:intergenic
CAGCGGACCAACGGAGACGG+AGG 0.640762 tig0021182:+99691 None:intergenic
ACCGCATAAAATCACGACAC+TGG 0.642109 tig0021182:+95770 None:intergenic
GGGGATCATTAATATCTGGA+AGG 0.642825 tig0021182:+97156 None:intergenic
GACTAGTCGTGACCAGCTTG+CGG 0.643562 tig0021182:-98962 Msa1388790:CDS
AAGATTCGGAATCCAGAACT+GGG 0.643798 tig0021182:+97436 None:intergenic
TTGCTCGAATTTGCATTGAG+GGG 0.644156 tig0021182:-98129 Msa1388790:CDS
GCAAGAACAAGACAGGGTTG+AGG 0.647585 tig0021182:-97270 Msa1388790:CDS
CAACATTTGACTCCGCAGCA+AGG 0.650912 tig0021182:+98365 None:intergenic
GGCCTGGAGTAGACGCACAA+GGG 0.654528 tig0021182:+97790 None:intergenic
TTATATGGAGAAGAATGAGG+AGG 0.657740 tig0021182:-99052 Msa1388790:CDS
TGAATATCAAGAGAGACTTG+AGG 0.658051 tig0021182:+97546 None:intergenic
GATCATATGAATGAATGGAT+GGG 0.659145 tig0021182:-99183 Msa1388790:CDS
AATCTGCGGTATAATCCCAT+CGG 0.662771 tig0021182:+98879 None:intergenic
AGCATTGTAAAGTTGGACGA+AGG 0.671018 tig0021182:+97199 None:intergenic
AGGGTTCAGCGACGAGACGG+AGG 0.675337 tig0021182:+99763 None:intergenic
AGAGAGAGGATTCGGCGTGG+CGG 0.684559 tig0021182:+99823 None:intergenic
TTATACCGCAGATTTGTCAG+GGG 0.685030 tig0021182:-98870 Msa1388790:CDS
TGTGGAGGAAGCATTCGGAG+AGG 0.686501 tig0021182:+99871 None:intergenic
TTAATAGTAAAGGACGAGGG+TGG 0.686705 tig0021182:-98307 Msa1388790:CDS
GGATTGTGATTCCGAATGTG+AGG 0.687428 tig0021182:-98849 Msa1388790:CDS
AGCGGTTTAAGAGTTTCCAG+TGG 0.688575 tig0021182:+99279 None:intergenic
CTCCTTTAATGCAAACCCGG+TGG 0.691872 tig0021182:-98644 Msa1388790:CDS
CGCAGCGTCAATCAACGACG+CGG 0.696713 tig0021182:+99323 None:intergenic
TCCGAATGTGAGGTTGAGGG+AGG 0.708339 tig0021182:-98839 Msa1388790:CDS
GATCATTAATATCTGGAAGG+GGG 0.710644 tig0021182:+97159 None:intergenic
ACAATCCCCTGACAAATCTG+CGG 0.710797 tig0021182:+98865 None:intergenic
GTAGTGATCTTGATACAAGG+AGG 0.711592 tig0021182:-98759 Msa1388790:CDS
CTCTTAATAGTAAAGGACGA+GGG 0.713370 tig0021182:-98310 Msa1388790:CDS
ACCAAATGAGATCAGCCAAG+GGG 0.717940 tig0021182:-97753 Msa1388790:CDS
GGTGGCGAATTGGAAGGACA+AGG 0.722542 tig0021182:-98626 Msa1388790:CDS
AGGAGAGAGAGGATTCGGCG+TGG 0.725402 tig0021182:+99820 None:intergenic
GAGGGCGAAGTTAGGTTGGG+AGG 0.730306 tig0021182:+99791 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGTTATTTGATTATTA+TGG - tig0021182:98881-98900 Msa1388790:CDS 10.0%
!!! TTAAAAATATTGTTGTTATA+TGG - tig0021182:99917-99936 Msa1388790:exon 10.0%
!!! TAAAAATATTGTTGTTATAT+GGG - tig0021182:99918-99937 Msa1388790:exon 10.0%
!! TGAGAATATTAATCTTTATA+TGG - tig0021182:96339-96358 Msa1388790:intron 15.0%
!! TGTATCTCAAAATATATTAA+GGG + tig0021182:98497-98516 None:intergenic 15.0%
!! ATGTATCTCAAAATATATTA+AGG + tig0021182:98498-98517 None:intergenic 15.0%
!! AGATATAAATAGACAAAAAA+GGG + tig0021182:98720-98739 None:intergenic 15.0%
!! TGAAATTATATAAAGATTGA+TGG + tig0021182:99127-99146 None:intergenic 15.0%
!!! AAAAAAATCATGTTACTTTT+AGG - tig0021182:99409-99428 Msa1388790:CDS 15.0%
!!! TTTAGTGTAAATTTTTTTCA+TGG - tig0021182:99737-99756 Msa1388790:CDS 15.0%
!! TGAATCATATTGAGTATATT+AGG - tig0021182:96611-96630 Msa1388790:intron 20.0%
!! ATGTTATGAAATGTATTATG+AGG - tig0021182:97223-97242 Msa1388790:CDS 20.0%
!! TGTTATGAAATGTATTATGA+GGG - tig0021182:97224-97243 Msa1388790:CDS 20.0%
!! AATATATTAAGGGTAGATTA+AGG + tig0021182:98487-98506 None:intergenic 20.0%
!! GTAATATTTATCTGCTTTAT+TGG - tig0021182:98654-98673 Msa1388790:CDS 20.0%
!! CAGATATAAATAGACAAAAA+AGG + tig0021182:98721-98740 None:intergenic 20.0%
!!! TTTCCATGTTTCATTTTATA+TGG - tig0021182:98836-98855 Msa1388790:CDS 20.0%
!!! TTCCATGTTTCATTTTATAT+GGG - tig0021182:98837-98856 Msa1388790:CDS 20.0%
!! CTAAATTGAAATATTGTGAA+AGG - tig0021182:98938-98957 Msa1388790:CDS 20.0%
!! AATTTAAATACTAAACATCC+AGG + tig0021182:99056-99075 None:intergenic 20.0%
!! CAATCTTTATATAATTTCAC+CGG - tig0021182:99128-99147 Msa1388790:CDS 20.0%
!! ATATTTAAGTAAATGTCAGA+AGG - tig0021182:99857-99876 Msa1388790:CDS 20.0%
!! TATTTAAGTAAATGTCAGAA+GGG - tig0021182:99858-99877 Msa1388790:CDS 20.0%
!! AAACTGACTAAAATTAAACA+TGG + tig0021182:99899-99918 None:intergenic 20.0%
!!! ATAATGAATTTTTTAAGCGA+AGG + tig0021182:99959-99978 None:intergenic 20.0%
!!! AACAAATTTTGAGAAAAATG+TGG + tig0021182:99992-100011 None:intergenic 20.0%
! AGTGAGTGTGAAATATATAA+CGG + tig0021182:95424-95443 None:intergenic 25.0%
! TTTCTTAAAAATCGAATTCG+CGG + tig0021182:95969-95988 None:intergenic 25.0%
! ATCATATTGAGTATATTAGG+AGG - tig0021182:96614-96633 Msa1388790:intron 25.0%
! TCATATTGAGTATATTAGGA+GGG - tig0021182:96615-96634 Msa1388790:intron 25.0%
!!! CTTCTTTTGATATTTGAGAT+CGG + tig0021182:96987-97006 None:intergenic 25.0%
! TGAGAAACTCTTAATAGTAA+AGG - tig0021182:97089-97108 Msa1388790:CDS 25.0%
! GAAAAATTCAGTTACATCAT+TGG + tig0021182:97469-97488 None:intergenic 25.0%
! AAAATCGCACTAAATATATC+AGG + tig0021182:97948-97967 None:intergenic 25.0%
! ATGAAGAAACAAAAAATTCC+CGG + tig0021182:98274-98293 None:intergenic 25.0%
!!! GGAATTTTTTGTTTCTTCAT+TGG - tig0021182:98274-98293 Msa1388790:CDS 25.0%
! ATACAGAATAAAATAGCAAC+TGG + tig0021182:98543-98562 None:intergenic 25.0%
! ACGATATATAAAAGCTTGAT+TGG + tig0021182:98592-98611 None:intergenic 25.0%
!! TCCATGTTTCATTTTATATG+GGG - tig0021182:98838-98857 Msa1388790:CDS 25.0%
! AATACATGATTACAGTGATA+CGG + tig0021182:98965-98984 None:intergenic 25.0%
! CACATATACAAGCTATTTAT+TGG + tig0021182:99176-99195 None:intergenic 25.0%
!!! TATGTGATTGAGTTTTTTCT+TGG - tig0021182:99190-99209 Msa1388790:CDS 25.0%
! GAGAAAGATAATAAACTGTT+TGG - tig0021182:99221-99240 Msa1388790:CDS 25.0%
!!! AGGCATTTATTTTAATTCTC+AGG - tig0021182:99467-99486 Msa1388790:CDS 25.0%
! ATGAGAATAACAGTAAATCT+CGG + tig0021182:99668-99687 None:intergenic 25.0%
!! ATTCTCATTTTGAATTCTGT+AGG - tig0021182:99680-99699 Msa1388790:CDS 25.0%
! AGAAGTTTGGGTTTGAAAAA+TGG + tig0021182:95447-95466 None:intergenic 30.0%
TGAGAAGAAAAGAGAAGTTT+GGG + tig0021182:95459-95478 None:intergenic 30.0%
TTGAGAAGAAAAGAGAAGTT+TGG + tig0021182:95460-95479 None:intergenic 30.0%
!!! GGTTTTGATTTGTTCCTTTT+CGG + tig0021182:95762-95781 None:intergenic 30.0%
!! GCTTGATTTGAAGTATTGTT+TGG - tig0021182:96021-96040 Msa1388790:intron 30.0%
TTGAGAAAAATCTCAAGCAA+AGG + tig0021182:96061-96080 None:intergenic 30.0%
ATATGATCCTCAAAAAACTC+AGG + tig0021182:96211-96230 None:intergenic 30.0%
TTGAGGATCATATGAATGAA+TGG - tig0021182:96218-96237 Msa1388790:intron 30.0%
GATCATATGAATGAATGGAT+GGG - tig0021182:96223-96242 Msa1388790:intron 30.0%
TCTTTATATGGAGAAGAATG+AGG - tig0021182:96351-96370 Msa1388790:intron 30.0%
!! TGTTCATCATAGTTTGTTTG+CGG - tig0021182:96504-96523 Msa1388790:intron 30.0%
TATCAAAAGAAGTAGCATTG+AGG - tig0021182:96995-97014 Msa1388790:intron 30.0%
! ATTGAGGTTTTTACCTGATT+TGG - tig0021182:97011-97030 Msa1388790:intron 30.0%
AAATGTATTATGAGGGTTCT+TGG - tig0021182:97231-97250 Msa1388790:CDS 30.0%
TCAAATATCTGCATGTAGAT+TGG + tig0021182:97549-97568 None:intergenic 30.0%
TGAAGAAACAAAAAATTCCC+GGG + tig0021182:98273-98292 None:intergenic 30.0%
AACTTACTCAAACTAATGCT+CGG + tig0021182:98403-98422 None:intergenic 30.0%
!! TCTGTTTTGAATGTGCTTAT+TGG - tig0021182:98442-98461 Msa1388790:CDS 30.0%
! TGTATTCATCTCAGTTCTTT+TGG - tig0021182:98558-98577 Msa1388790:CDS 30.0%
TGCACTAAAATTTGCAAGAA+CGG - tig0021182:98763-98782 Msa1388790:CDS 30.0%
TCCCCATATAAAATGAAACA+TGG + tig0021182:98842-98861 None:intergenic 30.0%
TGGATTTCTCATTGAACTTA+AGG - tig0021182:98901-98920 Msa1388790:CDS 30.0%
!!! TGATTGAGTTTTTTCTTGGT+TGG - tig0021182:99194-99213 Msa1388790:CDS 30.0%
! TTCATCTTTCTCCTTTTGTT+TGG - tig0021182:99271-99290 Msa1388790:CDS 30.0%
AGACTTATATATGCTTCTGA+AGG - tig0021182:99335-99354 Msa1388790:CDS 30.0%
GACTTATATATGCTTCTGAA+GGG - tig0021182:99336-99355 Msa1388790:CDS 30.0%
TAAACATGTGATCTCTAATC+AGG - tig0021182:99447-99466 Msa1388790:CDS 30.0%
TAAAATCCCAATAGACCAAA+TGG + tig0021182:99721-99740 None:intergenic 30.0%
TTGAGAAAAATGTGGATTTG+AGG + tig0021182:99984-100003 None:intergenic 30.0%
!! CTTGTTGCTAGTCTTCAAAA+AGG - tig0021182:95899-95918 Msa1388790:three_prime_UTR 35.0%
! ACCATTGATTGAAGCGTAAT+CGG + tig0021182:95936-95955 None:intergenic 35.0%
AATTTCTGTGACTCGAAAAG+CGG + tig0021182:96148-96167 None:intergenic 35.0%
AGTCACAGAAATTGTGTTGT+AGG - tig0021182:96155-96174 Msa1388790:intron 35.0%
GGATCATATGAATGAATGGA+TGG - tig0021182:96222-96241 Msa1388790:intron 35.0%
TACTAGTTATCCTTCTCTTG+AGG - tig0021182:96267-96286 Msa1388790:intron 35.0%
ACTAGTTATCCTTCTCTTGA+GGG - tig0021182:96268-96287 Msa1388790:intron 35.0%
TTATATGGAGAAGAATGAGG+AGG - tig0021182:96354-96373 Msa1388790:intron 35.0%
! GGCAATTAAGTTTTTGACGA+CGG - tig0021182:96471-96490 Msa1388790:intron 35.0%
ATTATACCGCAGATTTGTCA+GGG - tig0021182:96535-96554 Msa1388790:intron 35.0%
TGAGTATATTAGGAGGGATA+TGG - tig0021182:96621-96640 Msa1388790:intron 35.0%
TATATTAGGAGGGATATGGA+AGG - tig0021182:96625-96644 Msa1388790:intron 35.0%
AAGGTAGTGATCTTGATACA+AGG - tig0021182:96644-96663 Msa1388790:intron 35.0%
ATTGCTTGTGAGTTGCTTAA+GGG - tig0021182:96673-96692 Msa1388790:intron 35.0%
CAAGGATTGTGCGATATATT+TGG - tig0021182:96798-96817 Msa1388790:intron 35.0%
TTGAACATCAACAAGATCTG+TGG + tig0021182:96866-96885 None:intergenic 35.0%
GAATGAGTATCCAATGCTTA+AGG - tig0021182:96933-96952 Msa1388790:intron 35.0%
ACTCTTAATAGTAAAGGACG+AGG - tig0021182:97095-97114 Msa1388790:CDS 35.0%
CTCTTAATAGTAAAGGACGA+GGG - tig0021182:97096-97115 Msa1388790:CDS 35.0%
! TTCATCAGCATTGAGAAAAC+TGG + tig0021182:97156-97175 None:intergenic 35.0%
! AACAGATAATGGTTGAAGGT+GGG + tig0021182:97345-97364 None:intergenic 35.0%
! AAACAGATAATGGTTGAAGG+TGG + tig0021182:97346-97365 None:intergenic 35.0%
! CTCAAACAGATAATGGTTGA+AGG + tig0021182:97349-97368 None:intergenic 35.0%
!! CTACTGACTCAAACAGATAA+TGG + tig0021182:97356-97375 None:intergenic 35.0%
CAAAAACAGACACAAGAGTT+GGG + tig0021182:97410-97429 None:intergenic 35.0%
TCAAAAACAGACACAAGAGT+TGG + tig0021182:97411-97430 None:intergenic 35.0%
ACAGTATTATTTCAAGCCGA+GGG + tig0021182:97446-97465 None:intergenic 35.0%
CAAGTAACTGAAATGCGTAT+GGG + tig0021182:97491-97510 None:intergenic 35.0%
ATATCTGCATGTAGATTGGT+GGG + tig0021182:97545-97564 None:intergenic 35.0%
AATATCTGCATGTAGATTGG+TGG + tig0021182:97546-97565 None:intergenic 35.0%
! TTCTTTTGTCACCTGATTCT+TGG - tig0021182:97571-97590 Msa1388790:CDS 35.0%
GTCAAATATGCCAAGTACTT+TGG + tig0021182:97688-97707 None:intergenic 35.0%
GCCTTATGTTTCTCACATTT+GGG - tig0021182:97794-97813 Msa1388790:CDS 35.0%
TGAATATCAAGAGAGACTTG+AGG + tig0021182:97863-97882 None:intergenic 35.0%
GATATTCAGTTCACTGTTTC+TGG - tig0021182:97875-97894 Msa1388790:CDS 35.0%
ACTAAATATATCAGGCTGGA+CGG + tig0021182:97940-97959 None:intergenic 35.0%
CCAGTAATCAGCTTAAGATT+CGG + tig0021182:97987-98006 None:intergenic 35.0%
GTATTGTGACACTTCTTTCT+CGG - tig0021182:98114-98133 Msa1388790:CDS 35.0%
! CCTACATTTTCTGCAATATC+TGG + tig0021182:98176-98195 None:intergenic 35.0%
CCAGATATTGCAGAAAATGT+AGG - tig0021182:98173-98192 Msa1388790:CDS 35.0%
GATCATTAATATCTGGAAGG+GGG + tig0021182:98250-98269 None:intergenic 35.0%
GGATCATTAATATCTGGAAG+GGG + tig0021182:98251-98270 None:intergenic 35.0%
GGGATCATTAATATCTGGAA+GGG + tig0021182:98252-98271 None:intergenic 35.0%
TTCCAGATATTAATGATCCC+CGG - tig0021182:98252-98271 Msa1388790:CDS 35.0%
GAAGAAACAAAAAATTCCCG+GGG + tig0021182:98272-98291 None:intergenic 35.0%
! GAGCATTAGTTTGAGTAAGT+TGG - tig0021182:98402-98421 Msa1388790:CDS 35.0%
GGTAGATTAAGGAAAAGTCA+TGG + tig0021182:98476-98495 None:intergenic 35.0%
CAAAATACCCACAGCTAAAA+GGG + tig0021182:98618-98637 None:intergenic 35.0%
! TTTATTGGTAGCAACTAGCA+AGG - tig0021182:98669-98688 Msa1388790:CDS 35.0%
! TTATTGGTAGCAACTAGCAA+GGG - tig0021182:98670-98689 Msa1388790:CDS 35.0%
! TATGTCTCTTTTGTTCCTCT+TGG - tig0021182:98797-98816 Msa1388790:CDS 35.0%
!! TTTTGTTCCTCTTGGTTTGA+TGG - tig0021182:98805-98824 Msa1388790:CDS 35.0%
ACACTATGGAAGTCAATGAT+GGG + tig0021182:99003-99022 None:intergenic 35.0%
CGCAAAATGAATTCACACTA+TGG + tig0021182:99017-99036 None:intergenic 35.0%
!!! TTGAGTTTTTTCTTGGTTGG+AGG - tig0021182:99197-99216 Msa1388790:CDS 35.0%
!! ATCTTTCTCCTTTTGTTTGG+TGG - tig0021182:99274-99293 Msa1388790:CDS 35.0%
!! TCTTTCTCCTTTTGTTTGGT+GGG - tig0021182:99275-99294 Msa1388790:CDS 35.0%
AACCACTCAAATGTTGCAAA+AGG + tig0021182:99537-99556 None:intergenic 35.0%
!! AGTTTGTTGGTTCCATTCCA+TGG + tig0021182:95507-95526 None:intergenic 40.0%
AGAGGAATTGGAGAGTTTGT+TGG + tig0021182:95520-95539 None:intergenic 40.0%
!!! GAGGTGGTTTTTGAAGTTGA+CGG + tig0021182:95699-95718 None:intergenic 40.0%
! TTTGTTCCTTTTCGGAATCG+AGG + tig0021182:95754-95773 None:intergenic 40.0%
!! AGATTGGATTTTGTTGGTGG+CGG + tig0021182:95807-95826 None:intergenic 40.0%
! CTGAGATTGGATTTTGTTGG+TGG + tig0021182:95810-95829 None:intergenic 40.0%
! GAGCTGAGATTGGATTTTGT+TGG + tig0021182:95813-95832 None:intergenic 40.0%
ATCACGATTTCCCCAAATCA+TGG - tig0021182:95858-95877 Msa1388790:three_prime_UTR 40.0%
TGAAGACTAGCAACAAGTTC+CGG + tig0021182:95896-95915 None:intergenic 40.0%
TCCGATTACGCTTCAATCAA+TGG - tig0021182:95932-95951 Msa1388790:intron 40.0%
TTTAAGAGTTTCCAGTGGTG+GGG + tig0021182:96125-96144 None:intergenic 40.0%
GTTTAAGAGTTTCCAGTGGT+GGG + tig0021182:96126-96145 None:intergenic 40.0%
!!! AGAGTTGCCTGAGTTTTTTG+AGG - tig0021182:96201-96220 Msa1388790:intron 40.0%
ATGAATGGATGGGTGAGTTT+AGG - tig0021182:96233-96252 Msa1388790:intron 40.0%
CTAGTTATCCTTCTCTTGAG+GGG - tig0021182:96269-96288 Msa1388790:intron 40.0%
GAAGAATGAGGAGGAGTTTA+AGG - tig0021182:96363-96382 Msa1388790:intron 40.0%
!!! ATGATTTTGCACTTGCTGTG+TGG - tig0021182:96395-96414 Msa1388790:intron 40.0%
TTGCTGTGTGGACTTTGTTA+GGG - tig0021182:96407-96426 Msa1388790:intron 40.0%
AATCTGCGGTATAATCCCAT+CGG + tig0021182:96530-96549 None:intergenic 40.0%
GATTATACCGCAGATTTGTC+AGG - tig0021182:96534-96553 Msa1388790:intron 40.0%
TTATACCGCAGATTTGTCAG+GGG - tig0021182:96536-96555 Msa1388790:intron 40.0%
GTAGTGATCTTGATACAAGG+AGG - tig0021182:96647-96666 Msa1388790:intron 40.0%
GATTGCTTGTGAGTTGCTTA+AGG - tig0021182:96672-96691 Msa1388790:intron 40.0%
TTGCTTGTGAGTTGCTTAAG+GGG - tig0021182:96674-96693 Msa1388790:intron 40.0%
AAGCTCCTTTAATGCAAACC+CGG - tig0021182:96759-96778 Msa1388790:intron 40.0%
GGATTGTGCGATATATTTGG+TGG - tig0021182:96801-96820 Msa1388790:intron 40.0%
GGTCTCTCTTTCTACAAAGA+AGG - tig0021182:96822-96841 Msa1388790:intron 40.0%
AAGATCTGTGGAGACATAAC+CGG + tig0021182:96854-96873 None:intergenic 40.0%
!!! CATCTGCTTTTTGCAACTCA+GGG + tig0021182:96912-96931 None:intergenic 40.0%
!!! ACATCTGCTTTTTGCAACTC+AGG + tig0021182:96913-96932 None:intergenic 40.0%
TTAATAGTAAAGGACGAGGG+TGG - tig0021182:97099-97118 Msa1388790:CDS 40.0%
! ACTGATTCTCTTCAGACTCT+GGG + tig0021182:97203-97222 None:intergenic 40.0%
!! TACTGATTCTCTTCAGACTC+TGG + tig0021182:97204-97223 None:intergenic 40.0%
TGTTGCTCGAATTTGCATTG+AGG - tig0021182:97275-97294 Msa1388790:CDS 40.0%
GTTGCTCGAATTTGCATTGA+GGG - tig0021182:97276-97295 Msa1388790:CDS 40.0%
TTGCTCGAATTTGCATTGAG+GGG - tig0021182:97277-97296 Msa1388790:CDS 40.0%
! ACAGATAATGGTTGAAGGTG+GGG + tig0021182:97344-97363 None:intergenic 40.0%
TATCTGTTTGAGTCAGTAGC+CGG - tig0021182:97357-97376 Msa1388790:CDS 40.0%
! TTGAAACAAGCCTTTTCCCT+CGG - tig0021182:97427-97446 Msa1388790:CDS 40.0%
TTATTTCAAGCCGAGGGAAA+AGG + tig0021182:97440-97459 None:intergenic 40.0%
GACAGTATTATTTCAAGCCG+AGG + tig0021182:97447-97466 None:intergenic 40.0%
GCAAGTAACTGAAATGCGTA+TGG + tig0021182:97492-97511 None:intergenic 40.0%
!!! ATTTGGTGCCTTTTGAAGGA+AGG + tig0021182:97640-97659 None:intergenic 40.0%
!!! TCTCATTTGGTGCCTTTTGA+AGG + tig0021182:97644-97663 None:intergenic 40.0%
! GATAGACTGACCAAAGTACT+TGG - tig0021182:97675-97694 Msa1388790:CDS 40.0%
CGCCTTATGTTTCTCACATT+TGG - tig0021182:97793-97812 Msa1388790:CDS 40.0%
GCCCAAATGTGAGAAACATA+AGG + tig0021182:97798-97817 None:intergenic 40.0%
!! TTTTTAGAGAGCTCCAGAGA+AGG - tig0021182:97823-97842 Msa1388790:CDS 40.0%
!! TCACTGTTTCTGGTTAAGCA+TGG - tig0021182:97885-97904 Msa1388790:CDS 40.0%
TCGCACTAAATATATCAGGC+TGG + tig0021182:97944-97963 None:intergenic 40.0%
AAGATTCGGAATCCAGAACT+GGG + tig0021182:97973-97992 None:intergenic 40.0%
TAAGATTCGGAATCCAGAAC+TGG + tig0021182:97974-97993 None:intergenic 40.0%
CCGAATCTTAAGCTGATTAC+TGG - tig0021182:97984-98003 Msa1388790:CDS 40.0%
ATTGTAAAGTTGGACGAAGG+TGG + tig0021182:98207-98226 None:intergenic 40.0%
AGCATTGTAAAGTTGGACGA+AGG + tig0021182:98210-98229 None:intergenic 40.0%
TTCGTCCAACTTTACAATGC+TGG - tig0021182:98209-98228 Msa1388790:CDS 40.0%
TCCAACTTTACAATGCTGGA+AGG - tig0021182:98213-98232 Msa1388790:CDS 40.0%
TCCTTCCAGCATTGTAAAGT+TGG + tig0021182:98217-98236 None:intergenic 40.0%
GGGGATCATTAATATCTGGA+AGG + tig0021182:98253-98272 None:intergenic 40.0%
TCCAGATATTAATGATCCCC+GGG - tig0021182:98253-98272 Msa1388790:CDS 40.0%
CATTTGCAGTGATGACTTGA+GGG + tig0021182:98331-98350 None:intergenic 40.0%
ACATTTGCAGTGATGACTTG+AGG + tig0021182:98332-98351 None:intergenic 40.0%
AACTAATGCTCGGTTGTAAG+TGG + tig0021182:98393-98412 None:intergenic 40.0%
CCAAAATACCCACAGCTAAA+AGG + tig0021182:98619-98638 None:intergenic 40.0%
!! CCTTTTAGCTGTGGGTATTT+TGG - tig0021182:98616-98635 Msa1388790:CDS 40.0%
GAGTATACCATCAAACCAAG+AGG + tig0021182:98815-98834 None:intergenic 40.0%
CACACTATGGAAGTCAATGA+TGG + tig0021182:99004-99023 None:intergenic 40.0%
CGAAAATACACAAACTAGCC+TGG - tig0021182:99035-99054 Msa1388790:CDS 40.0%
CTTACTACCCACCAAACAAA+AGG + tig0021182:99285-99304 None:intergenic 40.0%
TTCACTCCAAACATGAGAAG+AGG + tig0021182:99390-99409 None:intergenic 40.0%
TTAATTCTCAGGATCTGTGC+TGG - tig0021182:99478-99497 Msa1388790:CDS 40.0%
TAATTCTCAGGATCTGTGCT+GGG - tig0021182:99479-99498 Msa1388790:CDS 40.0%
TCAAATGTTGCAAAAGGCTG+AGG + tig0021182:99531-99550 None:intergenic 40.0%
! AGCCTTTTGCAACATTTGAG+TGG - tig0021182:99532-99551 Msa1388790:CDS 40.0%
! GCAGAAGTATACTCGAAAGT+AGG + tig0021182:99572-99591 None:intergenic 40.0%
ATCACGACACTGGCAAAAAT+TGG + tig0021182:99629-99648 None:intergenic 40.0%
! CATGTGTTTGAAGTGCCATT+TGG - tig0021182:99703-99722 Msa1388790:CDS 40.0%
!! TGAAGTGCCATTTGGTCTAT+TGG - tig0021182:99711-99730 Msa1388790:CDS 40.0%
!! GAAGTGCCATTTGGTCTATT+GGG - tig0021182:99712-99731 Msa1388790:CDS 40.0%
AATGCAGGAAATTGGGGAAA+GGG + tig0021182:99765-99784 None:intergenic 40.0%
AAATGCAGGAAATTGGGGAA+AGG + tig0021182:99766-99785 None:intergenic 40.0%
AAGCGGAAATGCAGGAAATT+GGG + tig0021182:99772-99791 None:intergenic 40.0%
! AATCACTGCCATTTGCTCAA+AGG + tig0021182:99809-99828 None:intergenic 40.0%
CCATGGTGAATGTGCGATTA+GGG + tig0021182:95490-95509 None:intergenic 45.0%
TCCATGGTGAATGTGCGATT+AGG + tig0021182:95491-95510 None:intergenic 45.0%
ATCGCACATTCACCATGGAA+TGG - tig0021182:95492-95511 Msa1388790:three_prime_UTR 45.0%
!!! GTTTTTGAAGTTGACGGCAG+CGG + tig0021182:95693-95712 None:intergenic 45.0%
GAGGATTGGGTTATCTTCAG+CGG + tig0021182:95735-95754 None:intergenic 45.0%
! CCTTTTCGGAATCGAGGATT+GGG + tig0021182:95748-95767 None:intergenic 45.0%
! TCCTTTTCGGAATCGAGGAT+TGG + tig0021182:95749-95768 None:intergenic 45.0%
! GAGCATGAGAGGTACGATTA+GGG + tig0021182:95783-95802 None:intergenic 45.0%
! AGAGCATGAGAGGTACGATT+AGG + tig0021182:95784-95803 None:intergenic 45.0%
GTGATTCCCGATGATAGCTA+GGG + tig0021182:95843-95862 None:intergenic 45.0%
TTAAGAGTTTCCAGTGGTGG+GGG + tig0021182:96124-96143 None:intergenic 45.0%
GGTTTAAGAGTTTCCAGTGG+TGG + tig0021182:96127-96146 None:intergenic 45.0%
AGCGGTTTAAGAGTTTCCAG+TGG + tig0021182:96130-96149 None:intergenic 45.0%
TTGCTCTTGTGGATGAGCTT+AGG - tig0021182:96305-96324 Msa1388790:intron 45.0%
TGCTCTTGTGGATGAGCTTA+GGG - tig0021182:96306-96325 Msa1388790:intron 45.0%
! CTTGCTGTGTGGACTTTGTT+AGG - tig0021182:96406-96425 Msa1388790:intron 45.0%
!! ATAGTTTGTTTGCGGCCGAT+GGG - tig0021182:96512-96531 Msa1388790:intron 45.0%
ACAATCCCCTGACAAATCTG+CGG + tig0021182:96544-96563 None:intergenic 45.0%
GGATTGTGATTCCGAATGTG+AGG - tig0021182:96557-96576 Msa1388790:intron 45.0%
TGATTCCGAATGTGAGGTTG+AGG - tig0021182:96563-96582 Msa1388790:intron 45.0%
GATTCCGAATGTGAGGTTGA+GGG - tig0021182:96564-96583 Msa1388790:intron 45.0%
GTGATCTTGATACAAGGAGG+AGG - tig0021182:96650-96669 Msa1388790:intron 45.0%
TCTACAAAGAAGGCTGCAAC+CGG - tig0021182:96832-96851 Msa1388790:intron 45.0%
GAGTATCCAATGCTTAAGGC+AGG - tig0021182:96937-96956 Msa1388790:intron 45.0%
GCAAGGAAACGAACCAAATC+AGG + tig0021182:97027-97046 None:intergenic 45.0%
! TTTGGTTCGTTTCCTTGCTG+CGG - tig0021182:97029-97048 Msa1388790:CDS 45.0%
! TTCAGACTCTGGGAGCTTAA+AGG + tig0021182:97193-97212 None:intergenic 45.0%
TCGAATTTGCATTGAGGGGT+TGG - tig0021182:97281-97300 Msa1388790:CDS 45.0%
CGAATTTGCATTGAGGGGTT+GGG - tig0021182:97282-97301 Msa1388790:CDS 45.0%
GAATTTGCATTGAGGGGTTG+GGG - tig0021182:97283-97302 Msa1388790:CDS 45.0%
!!! TGGTTGAAGGTGGGGTTTTT+TGG + tig0021182:97336-97355 None:intergenic 45.0%
TGCATGTAGATTGGTGGGAT+GGG + tig0021182:97540-97559 None:intergenic 45.0%
! GCGCTTCTTTTCCAAGAATC+AGG + tig0021182:97585-97604 None:intergenic 45.0%
CACCAAATGAGATCAGCCAA+GGG - tig0021182:97652-97671 Msa1388790:CDS 45.0%
ACCAAATGAGATCAGCCAAG+GGG - tig0021182:97653-97672 Msa1388790:CDS 45.0%
GCATCAAGCACTTCTGATCA+AGG - tig0021182:97720-97739 Msa1388790:CDS 45.0%
TGGAGACTCACAAATGAGTC+TGG + tig0021182:98045-98064 None:intergenic 45.0%
TTGTGAGTCTCCAGTACTTC+TGG - tig0021182:98052-98071 Msa1388790:CDS 45.0%
TTCTGCATCCTGGGGTAAAA+TGG - tig0021182:98085-98104 Msa1388790:CDS 45.0%
TTTCTCGGCAAGAACAAGAC+AGG - tig0021182:98129-98148 Msa1388790:CDS 45.0%
TTCTCGGCAAGAACAAGACA+GGG - tig0021182:98130-98149 Msa1388790:CDS 45.0%
TCTGCAATATCTGGCATGTC+AGG + tig0021182:98167-98186 None:intergenic 45.0%
TCCCGGGGATCATTAATATC+TGG + tig0021182:98257-98276 None:intergenic 45.0%
!! ATCGTTGACCCTTTTAGCTG+TGG - tig0021182:98607-98626 Msa1388790:CDS 45.0%
!! TCGTTGACCCTTTTAGCTGT+GGG - tig0021182:98608-98627 Msa1388790:CDS 45.0%
CAGAGAAACAACTATGCAGC+CGG + tig0021182:99150-99169 None:intergenic 45.0%
TACGCTCCTCTTCTCATGTT+TGG - tig0021182:99381-99400 Msa1388790:CDS 45.0%
TGGGATTGAGCATTACTGTC+TGG - tig0021182:99503-99522 Msa1388790:CDS 45.0%
GTATACTCGAAAGTAGGCAG+AGG + tig0021182:99566-99585 None:intergenic 45.0%
! GCCAGTGTCGTGATTTTATG+CGG - tig0021182:99635-99654 Msa1388790:CDS 45.0%
ACCGCATAAAATCACGACAC+TGG + tig0021182:99639-99658 None:intergenic 45.0%
ATGCAGGAAATTGGGGAAAG+GGG + tig0021182:99764-99783 None:intergenic 45.0%
AGCGGAAATGCAGGAAATTG+GGG + tig0021182:99771-99790 None:intergenic 45.0%
CAAGCGGAAATGCAGGAAAT+TGG + tig0021182:99773-99792 None:intergenic 45.0%
CATGCATGCCTTTGAGCAAA+TGG - tig0021182:99798-99817 Msa1388790:CDS 45.0%
CCCTAATCGCACATTCACCA+TGG - tig0021182:95487-95506 Msa1388790:three_prime_UTR 50.0%
!! GGAAGCATTCGGAGAGGAAT+TGG + tig0021182:95532-95551 None:intergenic 50.0%
!! GAGAGTGTGGAGGAAGCATT+CGG + tig0021182:95543-95562 None:intergenic 50.0%
! TTGACGGATCTGATCGGAGA+TGG + tig0021182:95669-95688 None:intergenic 50.0%
GGTTATCTTCAGCGGACCAA+CGG + tig0021182:95727-95746 None:intergenic 50.0%
CCCAATCCTCGATTCCGAAA+AGG - tig0021182:95745-95764 Msa1388790:three_prime_UTR 50.0%
TCCGAAGCCCTAGCTATCAT+CGG - tig0021182:95833-95852 Msa1388790:three_prime_UTR 50.0%
CGTGATTCCCGATGATAGCT+AGG + tig0021182:95844-95863 None:intergenic 50.0%
AGAAGCGAGGGCCATGATTT+GGG + tig0021182:95872-95891 None:intergenic 50.0%
AAGAAGCGAGGGCCATGATT+TGG + tig0021182:95873-95892 None:intergenic 50.0%
ACAAGTTCCGGAAGAAGCGA+GGG + tig0021182:95884-95903 None:intergenic 50.0%
AACAAGTTCCGGAAGAAGCG+AGG + tig0021182:95885-95904 None:intergenic 50.0%
! TGCTGATGGTCTTGCTCTTG+TGG - tig0021182:96294-96313 Msa1388790:intron 50.0%
TAATTGCCGTAACCGCAAGC+TGG + tig0021182:96459-96478 None:intergenic 50.0%
!! CATAGTTTGTTTGCGGCCGA+TGG - tig0021182:96511-96530 Msa1388790:intron 50.0%
TCCTCCCTCAACCTCACATT+CGG + tig0021182:96571-96590 None:intergenic 50.0%
AAGGGGATTGCTACGCGTTA+TGG - tig0021182:96691-96710 Msa1388790:intron 50.0%
CTCCTTTAATGCAAACCCGG+TGG - tig0021182:96762-96781 Msa1388790:intron 50.0%
TTGTCCTTCCAATTCGCCAC+CGG + tig0021182:96781-96800 None:intergenic 50.0%
AGTGCACCTGCCTTAAGCAT+TGG + tig0021182:96946-96965 None:intergenic 50.0%
CAACATTTGACTCCGCAGCA+AGG + tig0021182:97044-97063 None:intergenic 50.0%
ATGTAGATTGGTGGGATGGG+TGG + tig0021182:97537-97556 None:intergenic 50.0%
CTGCATGTAGATTGGTGGGA+TGG + tig0021182:97541-97560 None:intergenic 50.0%
ACTCCAGGCCTTCCTTCAAA+AGG - tig0021182:97629-97648 Msa1388790:CDS 50.0%
GCACCAAATGAGATCAGCCA+AGG - tig0021182:97651-97670 Msa1388790:CDS 50.0%
TCCCCTTGGCTGATCTCATT+TGG + tig0021182:97657-97676 None:intergenic 50.0%
CTTTGGTCAGTCTATCCCCT+TGG + tig0021182:97671-97690 None:intergenic 50.0%
TTAGAGAGCTCCAGAGAAGG+CGG - tig0021182:97826-97845 Msa1388790:CDS 50.0%
!! GTGCGATTTTGACCCAGTTC+TGG - tig0021182:97958-97977 Msa1388790:CDS 50.0%
TGCATCCTGGGGTAAAATGG+TGG - tig0021182:98088-98107 Msa1388790:CDS 50.0%
! ACTGTCCACCATTTTACCCC+AGG + tig0021182:98096-98115 None:intergenic 50.0%
GCAAGAACAAGACAGGGTTG+AGG - tig0021182:98136-98155 Msa1388790:CDS 50.0%
AGAACAAGACAGGGTTGAGG+AGG - tig0021182:98139-98158 Msa1388790:CDS 50.0%
TATCTGGAAGGGGGTCTTCT+TGG + tig0021182:98241-98260 None:intergenic 50.0%
AGGGAACTGTGCACAAAGCT+GGG + tig0021182:98300-98319 None:intergenic 50.0%
! AGCTTTGTGCACAGTTCCCT+GGG - tig0021182:98300-98319 Msa1388790:CDS 50.0%
AGCAACGCTGTCTGATTCAC+AGG + tig0021182:98359-98378 None:intergenic 50.0%
TGCAGGAAATTGGGGAAAGG+GGG + tig0021182:99763-99782 None:intergenic 50.0%
TGCTCAACAAGCGGAAATGC+AGG + tig0021182:99780-99799 None:intergenic 50.0%
AGGCATGCATGCTCAACAAG+CGG + tig0021182:99789-99808 None:intergenic 50.0%
!! TGTGGAGGAAGCATTCGGAG+AGG + tig0021182:95538-95557 None:intergenic 55.0%
!! GAAGTTAGGTTGGGAGGAGG+CGG + tig0021182:95612-95631 None:intergenic 55.0%
CGGATCTGATCGGAGATGGA+GGG + tig0021182:95665-95684 None:intergenic 55.0%
ACGGATCTGATCGGAGATGG+AGG + tig0021182:95666-95685 None:intergenic 55.0%
! AGCGGCTTGACGGATCTGAT+CGG + tig0021182:95675-95694 None:intergenic 55.0%
AAAACCACCTCCGTCTCCGT+TGG - tig0021182:95708-95727 Msa1388790:three_prime_UTR 55.0%
CCCGATGATAGCTAGGGCTT+CGG + tig0021182:95837-95856 None:intergenic 55.0%
CCGAAGCCCTAGCTATCATC+GGG - tig0021182:95834-95853 Msa1388790:three_prime_UTR 55.0%
GAAGCGAGGGCCATGATTTG+GGG + tig0021182:95871-95890 None:intergenic 55.0%
ATCATGGCCCTCGCTTCTTC+CGG - tig0021182:95874-95893 Msa1388790:three_prime_UTR 55.0%
TCAGCACTCCCCTCAAGAGA+AGG + tig0021182:96280-96299 None:intergenic 55.0%
!! TCTCTTGAGGGGAGTGCTGA+TGG - tig0021182:96280-96299 Msa1388790:intron 55.0%
TGTGGATGAGCTTAGGGCTG+CGG - tig0021182:96312-96331 Msa1388790:intron 55.0%
! GACTAGTCGTGACCAGCTTG+CGG - tig0021182:96444-96463 Msa1388790:intron 55.0%
TCGTGACCAGCTTGCGGTTA+CGG - tig0021182:96450-96469 Msa1388790:intron 55.0%
TCCGAATGTGAGGTTGAGGG+AGG - tig0021182:96567-96586 Msa1388790:intron 55.0%
GAGGTTGAGGGAGGATGATG+AGG - tig0021182:96576-96595 Msa1388790:intron 55.0%
CGCCACCGGGTTTGCATTAA+AGG + tig0021182:96767-96786 None:intergenic 55.0%
ATGCAAACCCGGTGGCGAAT+TGG - tig0021182:96770-96789 Msa1388790:intron 55.0%
AAACCCGGTGGCGAATTGGA+AGG - tig0021182:96774-96793 Msa1388790:intron 55.0%
TGTCCTTCCAATTCGCCACC+GGG + tig0021182:96780-96799 None:intergenic 55.0%
GGTGGCGAATTGGAAGGACA+AGG - tig0021182:96780-96799 Msa1388790:intron 55.0%
TAGTAAAGGACGAGGGTGGC+AGG - tig0021182:97103-97122 Msa1388790:CDS 55.0%
! CAGTAGCCGGTCTTGTGAAG+CGG - tig0021182:97370-97389 Msa1388790:CDS 55.0%
! AGTAGCCGGTCTTGTGAAGC+GGG - tig0021182:97371-97390 Msa1388790:CDS 55.0%
AGAAGCCCGCTTCACAAGAC+CGG + tig0021182:97379-97398 None:intergenic 55.0%
! TTGTGAAGCGGGCTTCTGAG+AGG - tig0021182:97382-97401 Msa1388790:CDS 55.0%
! TGTGAAGCGGGCTTCTGAGA+GGG - tig0021182:97383-97402 Msa1388790:CDS 55.0%
!! GTGCCTTTTGAAGGAAGGCC+TGG + tig0021182:97635-97654 None:intergenic 55.0%
GCTTTACTGTCCGCCTTCTC+TGG + tig0021182:97839-97858 None:intergenic 55.0%
! GCTGCAGGATCCAGAAGTAC+TGG + tig0021182:98065-98084 None:intergenic 55.0%
ATCCTGCAGCTTCTGCATCC+TGG - tig0021182:98075-98094 Msa1388790:CDS 55.0%
TCCTGCAGCTTCTGCATCCT+GGG - tig0021182:98076-98095 Msa1388790:CDS 55.0%
CAGGGAACTGTGCACAAAGC+TGG + tig0021182:98301-98320 None:intergenic 55.0%
! CAGCTTTGTGCACAGTTCCC+TGG - tig0021182:98299-98318 Msa1388790:CDS 55.0%
TTTGTGCACAGTTCCCTGGG+AGG - tig0021182:98303-98322 Msa1388790:CDS 55.0%
TGACTTGAGGGAACCTCCCA+GGG + tig0021182:98319-98338 None:intergenic 55.0%
ATGACTTGAGGGAACCTCCC+AGG + tig0021182:98320-98339 None:intergenic 55.0%
TCTCAGGATCTGTGCTGGGA+TGG - tig0021182:99483-99502 Msa1388790:CDS 55.0%
CTCAGGATCTGTGCTGGGAT+GGG - tig0021182:99484-99503 Msa1388790:CDS 55.0%
! GGAGAGGAGAGAGAGTGTGG+AGG + tig0021182:95553-95572 None:intergenic 60.0%
CAGGGAGAGGAGAGAGAGTG+TGG + tig0021182:95556-95575 None:intergenic 60.0%
AGAGAGAGGATTCGGCGTGG+CGG + tig0021182:95586-95605 None:intergenic 60.0%
AGGAGAGAGAGGATTCGGCG+TGG + tig0021182:95589-95608 None:intergenic 60.0%
GGCGGAGGAGAGAGAGGATT+CGG + tig0021182:95594-95613 None:intergenic 60.0%
!! GGCGAAGTTAGGTTGGGAGG+AGG + tig0021182:95615-95634 None:intergenic 60.0%
!! GAGGGCGAAGTTAGGTTGGG+AGG + tig0021182:95618-95637 None:intergenic 60.0%
GGCGAGGGCGAAGTTAGGTT+GGG + tig0021182:95621-95640 None:intergenic 60.0%
TTCAGCGACGAGACGGAGGA+CGG + tig0021182:95642-95661 None:intergenic 60.0%
TGGAGGGTTCAGCGACGAGA+CGG + tig0021182:95649-95668 None:intergenic 60.0%
AGTTGACGGCAGCGGCTTGA+CGG + tig0021182:95685-95704 None:intergenic 60.0%
CTTCAGCGGACCAACGGAGA+CGG + tig0021182:95721-95740 None:intergenic 60.0%
!! TTGGTGGCGGAGAGCATGAG+AGG + tig0021182:95794-95813 None:intergenic 60.0%
GGGCTTCGGAGAGCTGAGAT+TGG + tig0021182:95823-95842 None:intergenic 60.0%
CGCAGCGTCAATCAACGACG+CGG + tig0021182:96086-96105 None:intergenic 60.0%
! CGCGTCGTTGATTGACGCTG+CGG - tig0021182:96084-96103 Msa1388790:intron 60.0%
! AGAGTTTCCAGTGGTGGGGG+CGG + tig0021182:96121-96140 None:intergenic 60.0%
GAGGGTGGCAGGCTACGTTA+TGG - tig0021182:97114-97133 Msa1388790:CDS 60.0%
TGGAGTAGACGCACAAGGGC+AGG + tig0021182:97615-97634 None:intergenic 60.0%
TGCCCTTGTGCGTCTACTCC+AGG - tig0021182:97614-97633 Msa1388790:CDS 60.0%
GGCCTGGAGTAGACGCACAA+GGG + tig0021182:97619-97638 None:intergenic 60.0%
AGGCCTGGAGTAGACGCACA+AGG + tig0021182:97620-97639 None:intergenic 60.0%
CCTGCAGCTTCTGCATCCTG+GGG - tig0021182:98077-98096 Msa1388790:CDS 60.0%
!! GTTAGGTTGGGAGGAGGCGG+AGG + tig0021182:95609-95628 None:intergenic 65.0%
CGGCGAGGGCGAAGTTAGGT+TGG + tig0021182:95622-95641 None:intergenic 65.0%
AGGACGGCGAGGGCGAAGTT+AGG + tig0021182:95626-95645 None:intergenic 65.0%
AGGGTTCAGCGACGAGACGG+AGG + tig0021182:95646-95665 None:intergenic 65.0%
CCCCAGGATGCAGAAGCTGC+AGG + tig0021182:98080-98099 None:intergenic 65.0%
AGAGGATTCGGCGTGGCGGC+GGG + tig0021182:95582-95601 None:intergenic 70.0%
GAGAGGATTCGGCGTGGCGG+CGG + tig0021182:95583-95602 None:intergenic 70.0%
GGAGGAGGCGGAGGAGAGAG+AGG + tig0021182:95600-95619 None:intergenic 70.0%
GACGAGACGGAGGACGGCGA+GGG + tig0021182:95636-95655 None:intergenic 70.0%
CGGACCAACGGAGACGGAGG+TGG + tig0021182:95715-95734 None:intergenic 70.0%
CAGCGGACCAACGGAGACGG+AGG + tig0021182:95718-95737 None:intergenic 70.0%
TGGCGGCGGGGTTCAGGGAG+AGG + tig0021182:95569-95588 None:intergenic 75.0%
GAGGATTCGGCGTGGCGGCG+GGG + tig0021182:95581-95600 None:intergenic 75.0%
CGACGAGACGGAGGACGGCG+AGG + tig0021182:95637-95656 None:intergenic 75.0%
ACAGCAGCCGCCCCCACCAC+TGG - tig0021182:96111-96130 Msa1388790:intron 75.0%
! CGGCGTGGCGGCGGGGTTCA+GGG + tig0021182:95574-95593 None:intergenic 80.0%
! TCGGCGTGGCGGCGGGGTTC+AGG + tig0021182:95575-95594 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0021182 gene 95396 100032 95396 ID=Msa1388790;Name=Msa1388790
tig0021182 mRNA 95396 100032 95396 ID=Msa1388790-mRNA-1;Parent=Msa1388790;Name=Msa1388790-mRNA-1;_AED=0.00;_eAED=0.00;_QI=110|1|1|1|0|0.5|2|544|969
tig0021182 exon 95396 95939 95396 ID=Msa1388790-mRNA-1:exon:11303;Parent=Msa1388790-mRNA-1
tig0021182 exon 97013 100032 97013 ID=Msa1388790-mRNA-1:exon:11302;Parent=Msa1388790-mRNA-1
tig0021182 five_prime_UTR 99923 100032 99923 ID=Msa1388790-mRNA-1:five_prime_utr;Parent=Msa1388790-mRNA-1
tig0021182 CDS 97013 99922 97013 ID=Msa1388790-mRNA-1:cds;Parent=Msa1388790-mRNA-1
tig0021182 three_prime_UTR 95396 95939 95396 ID=Msa1388790-mRNA-1:three_prime_utr;Parent=Msa1388790-mRNA-1
Gene Sequence

>Msa1388790

ATGGAATGGAACCAACAAACTCTCCAATTCCTCTCCGAATGCTTCCTCCACACTCTCTCTCCTCTCCCTGAACCCCGCCGCCACGCCGAATCCTCTCTCTCCTCCGCCTCCTCCCAACCTAACTTCGCCCTCGCCGTCCTCCGTCTCGTCGCTGAACCCTCCATCTCCGATCAGATCCGTCAAGCCGCTGCCGTCAACTTCAAAAACCACCTCCGTCTCCGTTGGTCCGCTGAAGATAACCCAATCCTCGATTCCGAAAAGGAACAAATCAAAACCCTAATCGTACCTCTCATGCTCTCCGCCACCAACAAAATCCAATCTCAGCTCTCCGAAGCCCTAGCTATCATCGGGAATCACGATTTCCCCAAATCATGGCCCTCGCTTCTTCCGGAACTTGTTGCTAGTCTTCAAAAAGGTTCTCAGAGTTCCGATTACGCTTCAATCAATGGTATTCTCAGTACCGCGAATTCGATTTTTAAGAAATTTCGTTTTCAGTATAAAACTAATGATTTATTGCTTGATTTGAAGTATTGTTTGGATAATTTTGCTGCTCCTTTGCTTGAGATTTTTCTCAAAACCGCGTCGTTGATTGACGCTGCGGCTGCACAGCAGCCGCCCCCACCACTGGAAACTCTTAAACCGCTTTTCGAGTCACAGAAATTGTGTTGTAGGATATTTTTTTCACTGAATTTTCAAGAGTTGCCTGAGTTTTTTGAGGATCATATGAATGAATGGATGGGTGAGTTTAGGAAGTATTTGACTACTAGTTATCCTTCTCTTGAGGGGAGTGCTGATGGTCTTGCTCTTGTGGATGAGCTTAGGGCTGCGGTTTGTGAGAATATTAATCTTTATATGGAGAAGAATGAGGAGGAGTTTAAGGTTTTTTTGAATGATTTTGCACTTGCTGTGTGGACTTTGTTAGGGAATGTGTCGCAGTCGACTAGTCGTGACCAGCTTGCGGTTACGGCAATTAAGTTTTTGACGACGGTTAGTACGAGTGTTCATCATAGTTTGTTTGCGGCCGATGGGATTATACCGCAGATTTGTCAGGGGATTGTGATTCCGAATGTGAGGTTGAGGGAGGATGATGAGGAGTTGTTTGAGATGAATCATATTGAGTATATTAGGAGGGATATGGAAGGTAGTGATCTTGATACAAGGAGGAGGATTGCTTGTGAGTTGCTTAAGGGGATTGCTACGCGTTATGGAGATGCTGTTAGAAGCATTGTTTCTGCGCAAGTACAGAGTTTGTTAAGCTCCTTTAATGCAAACCCGGTGGCGAATTGGAAGGACAAGGATTGTGCGATATATTTGGTGGTCTCTCTTTCTACAAAGAAGGCTGCAACCGGTTATGTCTCCACAGATCTTGTTGATGTTCAAAGCTTTTTTGAATCTGTGATTGTCCCTGAGTTGCAAAAAGCAGATGTGAATGAGTATCCAATGCTTAAGGCAGGTGCACTCAAGTTCTTTACTATGTTCCGATCTCAAATATCAAAAGAAGTAGCATTGAGGTTTTTACCTGATTTGGTTCGTTTCCTTGCTGCGGAGTCAAATGTTGTTCATTCTTATGCTGCTAGCTGTATTGAGAAACTCTTAATAGTAAAGGACGAGGGTGGCAGGCTACGTTATGGTTCAGCAGATATCGCTCCAGTTTTCTCAATGCTGATGAACAATCTTTTCAGTGCCTTTAAGCTCCCAGAGTCTGAAGAGAATCAGTATGTTATGAAATGTATTATGAGGGTTCTTGGTGTTGCAGATATACAACTTGATGTTGCTCGAATTTGCATTGAGGGGTTGGGGTCAATTCTTTCTGAAGTTTGCAGAAATCCAAAAAACCCCACCTTCAACCATTATCTGTTTGAGTCAGTAGCCGGTCTTGTGAAGCGGGCTTCTGAGAGGGACCCAACTCTTGTGTCTGTTTTTGAAACAAGCCTTTTCCCTCGGCTTGAAATAATACTGTCCAATGATGTAACTGAATTTTTCCCATACGCATTTCAGTTACTTGCTCTGCTTGTTGAGTTAAACAGACCACCCATCCCACCAATCTACATGCAGATATTTGAGATTCTTTTGTCACCTGATTCTTGGAAAAGAAGCGCAAGTGTTCCTGCCCTTGTGCGTCTACTCCAGGCCTTCCTTCAAAAGGCACCAAATGAGATCAGCCAAGGGGATAGACTGACCAAAGTACTTGGCATATTTGACACGCTAATACAAGCATCAAGCACTTCTGATCAAGGATTTTACGTGCTTAACACAGTCATTGAAAGTCTTCAGTATGATGTTCTTACGCCTTATGTTTCTCACATTTGGGCTGCTATTTTTAGAGAGCTCCAGAGAAGGCGGACAGTAAAGCTCCTCAAGTCTCTCTTGATATTCAGTTCACTGTTTCTGGTTAAGCATGGTTCTGCAAATCTAGTTAATACTATGAATGCCGTCCAGCCTGATATATTTAGTGCGATTTTGACCCAGTTCTGGATTCCGAATCTTAAGCTGATTACTGGAACTATAGAGCTCAAACTGACTGCAGTTGCTTCAACCAGACTCATTTGTGAGTCTCCAGTACTTCTGGATCCTGCAGCTTCTGCATCCTGGGGTAAAATGGTGGACAGTATTGTGACACTTCTTTCTCGGCAAGAACAAGACAGGGTTGAGGAGGAGCCTGACATGCCAGATATTGCAGAAAATGTAGGTTATACTGCCACCTTCGTCCAACTTTACAATGCTGGAAGGAACCAAGAAGACCCCCTTCCAGATATTAATGATCCCCGGGAATTTTTTGTTTCTTCATTGGCCCAGCTTTGTGCACAGTTCCCTGGGAGGTTCCCTCAAGTCATCACTGCAAATGTTGATCCTGTGAATCAGACAGCGTTGCTTCAACTTTGCACCACTTACAACCGAGCATTAGTTTGA
Protein sequence

>Msa1388790

MEWNQQTLQFLSECFLHTLSPLPEPRRHAESSLSSASSQPNFALAVLRLVAEPSISDQIRQAAAVNFKNHLRLRWSAEDNPILDSEKEQIKTLIVPLMLSATNKIQSQLSEALAIIGNHDFPKSWPSLLPELVASLQKGSQSSDYASINGILSTANSIFKKFRFQYKTNDLLLDLKYCLDNFAAPLLEIFLKTASLIDAAAAQQPPPPLETLKPLFESQKLCCRIFFSLNFQELPEFFEDHMNEWMGEFRKYLTTSYPSLEGSADGLALVDELRAAVCENINLYMEKNEEEFKVFLNDFALAVWTLLGNVSQSTSRDQLAVTAIKFLTTVSTSVHHSLFAADGIIPQICQGIVIPNVRLREDDEELFEMNHIEYIRRDMEGSDLDTRRRIACELLKGIATRYGDAVRSIVSAQVQSLLSSFNANPVANWKDKDCAIYLVVSLSTKKAATGYVSTDLVDVQSFFESVIVPELQKADVNEYPMLKAGALKFFTMFRSQISKEVALRFLPDLVRFLAAESNVVHSYAASCIEKLLIVKDEGGRLRYGSADIAPVFSMLMNNLFSAFKLPESEENQYVMKCIMRVLGVADIQLDVARICIEGLGSILSEVCRNPKNPTFNHYLFESVAGLVKRASERDPTLVSVFETSLFPRLEIILSNDVTEFFPYAFQLLALLVELNRPPIPPIYMQIFEILLSPDSWKRSASVPALVRLLQAFLQKAPNEISQGDRLTKVLGIFDTLIQASSTSDQGFYVLNTVIESLQYDVLTPYVSHIWAAIFRELQRRRTVKLLKSLLIFSSLFLVKHGSANLVNTMNAVQPDIFSAILTQFWIPNLKLITGTIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRQEQDRVEEEPDMPDIAENVGYTATFVQLYNAGRNQEDPLPDINDPREFFVSSLAQLCAQFPGRFPQVITANVDPVNQTALLQLCTTYNRALV*