AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1236640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236640 MtrunA17_Chr8g0346721 99.174 969 8 0 1 969 1 969 0.0 1973
Msa1236640 MtrunA17_Chr6g0469661 74.966 731 181 2 1 729 1 731 0.0 1078
Msa1236640 MtrunA17_Chr7g0221671 26.587 252 156 8 18 262 13 242 1.35e-13 75.5
Msa1236640 MtrunA17_Chr1g0213861 25.911 247 160 5 18 262 11 236 1.16e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236640 AT2G46520.1 68.557 970 298 3 1 965 1 968 0.0 1411
Msa1236640 AT3G59020.2 26.190 252 159 6 19 265 15 244 5.89e-15 80.5
Msa1236640 AT3G59020.1 26.087 253 160 6 18 265 14 244 6.86e-15 80.1
Msa1236640 AT2G31660.1 27.426 237 142 6 19 246 15 230 1.11e-13 76.3
Msa1236640 AT1G26170.1 31.788 151 92 3 6 151 5 149 2.80e-11 68.2

Find 284 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAATGAGGAGGAGTTTA+AGG 0.075617 8_2:-15722632 Msa1236640:CDS
GATATTCAGTTCACTGTTTC+TGG 0.091376 8_2:-15721120 Msa1236640:CDS
CGCCACCGGGTTTGCATTAA+AGG 0.121487 8_2:+15722231 None:intergenic
TCGGCGTGGCGGCGGGGTTC+AGG 0.167402 8_2:+15723423 None:intergenic
CGCCTTATGTTTCTCACATT+TGG 0.169130 8_2:-15721202 Msa1236640:CDS
CTTGCTGTGTGGACTTTGTT+AGG 0.222365 8_2:-15722589 Msa1236640:CDS
CAAGGATTGTGCGATATATT+TGG 0.232980 8_2:-15722197 Msa1236640:CDS
CAAGCGGAAATGCAGGAAAT+TGG 0.242407 8_2:+15719248 None:intergenic
CCGAATCTTAAGCTGATTAC+TGG 0.249866 8_2:-15721011 Msa1236640:CDS
TTGTGAGTCTCCAGTACTTC+TGG 0.252989 8_2:-15720943 Msa1236640:CDS
ATCCTGCAGCTTCTGCATCC+TGG 0.258895 8_2:-15720920 Msa1236640:CDS
TGAGAATATTAATCTTTATA+TGG 0.266958 8_2:-15722656 Msa1236640:CDS
TTCTGCATCCTGGGGTAAAA+TGG 0.284025 8_2:-15720910 Msa1236640:CDS
CAGCTTTGTGCACAGTTCCC+TGG 0.284744 8_2:-15720696 Msa1236640:CDS
CGAATTTGCATTGAGGGGTT+GGG 0.285078 8_2:-15721713 Msa1236640:CDS
TTGAGAAGAAAAGAGAAGTT+TGG 0.287920 8_2:+15723538 None:intergenic
TTCAGACTCTGGGAGCTTAA+AGG 0.289130 8_2:+15721805 None:intergenic
GCCTTATGTTTCTCACATTT+GGG 0.308273 8_2:-15721201 Msa1236640:CDS
TGAAGTGCCATTTGGTCTAT+TGG 0.316250 8_2:-15719307 Msa1236640:three_prime_UTR
TCCCCTTGGCTGATCTCATT+TGG 0.319827 8_2:+15721341 None:intergenic
AGAAGCGAGGGCCATGATTT+GGG 0.321584 8_2:+15723126 None:intergenic
TTGCTCTTGTGGATGAGCTT+AGG 0.321661 8_2:-15722690 Msa1236640:CDS
TGAATCATATTGAGTATATT+AGG 0.323794 8_2:-15722384 Msa1236640:CDS
TCCTGCAGCTTCTGCATCCT+GGG 0.325044 8_2:-15720919 Msa1236640:CDS
CCATGGTGAATGTGCGATTA+GGG 0.332349 8_2:+15723508 None:intergenic
TGGCGGCGGGGTTCAGGGAG+AGG 0.333918 8_2:+15723429 None:intergenic
TTCATCAGCATTGAGAAAAC+TGG 0.336053 8_2:+15721842 None:intergenic
AAGAAGCGAGGGCCATGATT+TGG 0.336122 8_2:+15723125 None:intergenic
ATGCAAACCCGGTGGCGAAT+TGG 0.341622 8_2:-15722225 Msa1236640:CDS
AAGCGGAAATGCAGGAAATT+GGG 0.347791 8_2:+15719249 None:intergenic
AGTCACAGAAATTGTGTTGT+AGG 0.352604 8_2:-15722840 Msa1236640:CDS
GAAGTGCCATTTGGTCTATT+GGG 0.356405 8_2:-15719306 Msa1236640:three_prime_UTR
ATCATGGCCCTCGCTTCTTC+CGG 0.357089 8_2:-15723121 Msa1236640:CDS
GGAAGCATTCGGAGAGGAAT+TGG 0.359953 8_2:+15723466 None:intergenic
GATTGCTTGTGAGTTGCTTA+AGG 0.364735 8_2:-15722323 Msa1236640:CDS
AGCTTTGTGCACAGTTCCCT+GGG 0.366805 8_2:-15720695 Msa1236640:CDS
GTATTGTGACACTTCTTTCT+CGG 0.370722 8_2:-15720881 Msa1236640:CDS
CTACTGACTCAAACAGATAA+TGG 0.371221 8_2:+15721642 None:intergenic
TCGTGACCAGCTTGCGGTTA+CGG 0.373029 8_2:-15722545 Msa1236640:CDS
TCCCGGGGATCATTAATATC+TGG 0.373759 8_2:+15720741 None:intergenic
AAATGTATTATGAGGGTTCT+TGG 0.376293 8_2:-15721764 Msa1236640:CDS
ACCATTGATTGAAGCGTAAT+CGG 0.377577 8_2:+15723062 None:intergenic
TGCTCTTGTGGATGAGCTTA+GGG 0.378445 8_2:-15722689 Msa1236640:CDS
AGAGGATTCGGCGTGGCGGC+GGG 0.379976 8_2:+15723416 None:intergenic
TGAGTATATTAGGAGGGATA+TGG 0.381340 8_2:-15722374 Msa1236640:CDS
TCGAATTTGCATTGAGGGGT+TGG 0.382244 8_2:-15721714 Msa1236640:CDS
AAGGGGATTGCTACGCGTTA+TGG 0.383164 8_2:-15722304 Msa1236640:CDS
GCTTTACTGTCCGCCTTCTC+TGG 0.384838 8_2:+15721159 None:intergenic
TGAAGACTAGCAACAAGTTC+CGG 0.387862 8_2:+15723102 None:intergenic
AGAGCATGAGAGGTACGATT+AGG 0.389704 8_2:+15723214 None:intergenic
AAAATCGCACTAAATATATC+AGG 0.393109 8_2:+15721050 None:intergenic
CAGGGAACTGTGCACAAAGC+TGG 0.393904 8_2:+15720697 None:intergenic
ACAATTTCTGTGACTCGAAA+AGG 0.393953 8_2:+15722848 None:intergenic
GATTATACCGCAGATTTGTC+AGG 0.398128 8_2:-15722461 Msa1236640:CDS
TGCTGATGGTCTTGCTCTTG+TGG 0.398506 8_2:-15722701 Msa1236640:CDS
CTTGTTGCTAGTCTTCAAAA+AGG 0.400301 8_2:-15723096 Msa1236640:CDS
ATGCAGGAAATTGGGGAAAG+GGG 0.403420 8_2:+15719257 None:intergenic
CGGCGTGGCGGCGGGGTTCA+GGG 0.404169 8_2:+15723424 None:intergenic
CATAGTTTGTTTGCGGCCGA+TGG 0.405046 8_2:-15722484 Msa1236640:CDS
TCCGATTACGCTTCAATCAA+TGG 0.406354 8_2:-15723063 Msa1236640:CDS
GCAAGGAAACGAACCAAATC+AGG 0.407252 8_2:+15721971 None:intergenic
CGGTCTTGTGAAGCGGGCTT+CGG 0.408402 8_2:-15721618 Msa1236640:CDS
TCCATGGTGAATGTGCGATT+AGG 0.408488 8_2:+15723507 None:intergenic
ATGAATGGATGGGTGAGTTT+AGG 0.409263 8_2:-15722762 Msa1236640:CDS
TGCCCTTGTGCGTCTACTCC+AGG 0.410838 8_2:-15721381 Msa1236640:CDS
GCTTGATTTGAAGTATTGTT+TGG 0.411121 8_2:-15722974 Msa1236640:CDS
TTTAGTGTTTCTGGTGGTGG+GGG 0.412756 8_2:+15722874 None:intergenic
ATGTTATGAAATGTATTATG+AGG 0.413049 8_2:-15721772 Msa1236640:CDS
GAGCATGAGAGGTACGATTA+GGG 0.413296 8_2:+15723215 None:intergenic
TTGCTGTGTGGACTTTGTTA+GGG 0.413943 8_2:-15722588 Msa1236640:CDS
GAGAGGATTCGGCGTGGCGG+CGG 0.414397 8_2:+15723415 None:intergenic
TCTGCAATATCTGGCATGTC+AGG 0.421184 8_2:+15720831 None:intergenic
TAAGATTCGGAATCCAGAAC+TGG 0.422640 8_2:+15721024 None:intergenic
TCCTCCCTCAACCTCACATT+CGG 0.426403 8_2:+15722427 None:intergenic
TCAAATATCTGCATGTAGAT+TGG 0.426703 8_2:+15721449 None:intergenic
TCTCTTGAGGGGAGTGCTGA+TGG 0.427391 8_2:-15722715 Msa1236640:CDS
GGCGGAGGAGAGAGAGGATT+CGG 0.429321 8_2:+15723404 None:intergenic
GTTAGGTTGGGAGGAGGCGG+AGG 0.429322 8_2:+15723389 None:intergenic
GAAGTTAGGTTGGGAGGAGG+CGG 0.430922 8_2:+15723386 None:intergenic
GTCAAATATGCCAAGTACTT+TGG 0.431949 8_2:+15721310 None:intergenic
GGAGGAGGCGGAGGAGAGAG+AGG 0.432967 8_2:+15723398 None:intergenic
TGAGAAGAAAAGAGAAGTTT+GGG 0.433876 8_2:+15723539 None:intergenic
AGGACGGCGAGGGCGAAGTT+AGG 0.434374 8_2:+15723372 None:intergenic
CGGCGAGGGCGAAGTTAGGT+TGG 0.440463 8_2:+15723376 None:intergenic
ATTGCTTGTGAGTTGCTTAA+GGG 0.442178 8_2:-15722322 Msa1236640:CDS
GCTGCAGGATCCAGAAGTAC+TGG 0.443966 8_2:+15720933 None:intergenic
CATGCATGCCTTTGAGCAAA+TGG 0.445037 8_2:-15719220 Msa1236640:three_prime_UTR
CGTGATTCCCGATGATAGCT+AGG 0.445613 8_2:+15723154 None:intergenic
TCCTTCCAGCATTGTAAAGT+TGG 0.446082 8_2:+15720781 None:intergenic
TTGTCCTTCCAATTCGCCAC+CGG 0.447945 8_2:+15722217 None:intergenic
CAATTTCTGTGACTCGAAAA+GGG 0.452985 8_2:+15722849 None:intergenic
CATGTGTTTGAAGTGCCATT+TGG 0.453119 8_2:-15719315 Msa1236640:three_prime_UTR
TTAATTCTCAGGATCTGTGC+TGG 0.454020 8_2:-15719540 Msa1236640:intron
TTCGTCCAACTTTACAATGC+TGG 0.457686 8_2:-15720786 Msa1236640:CDS
AGAGGAATTGGAGAGTTTGT+TGG 0.459131 8_2:+15723478 None:intergenic
GAATTTGCATTGAGGGGTTG+GGG 0.459250 8_2:-15721712 Msa1236640:CDS
TGTCCTTCCAATTCGCCACC+GGG 0.461059 8_2:+15722218 None:intergenic
CCCGATGATAGCTAGGGCTT+CGG 0.461908 8_2:+15723161 None:intergenic
GGGCTTCGGAGAGCTGAGAT+TGG 0.462047 8_2:+15723175 None:intergenic
TTATTTCAAGCCGAGGGAAA+AGG 0.463307 8_2:+15721558 None:intergenic
TACTGATTCTCTTCAGACTC+TGG 0.463688 8_2:+15721794 None:intergenic
TAAAATCCCAATAGACCAAA+TGG 0.464525 8_2:+15719300 None:intergenic
TTGAGGATCATATGAATGAA+TGG 0.467479 8_2:-15722777 Msa1236640:CDS
AGTTTGTTGGTTCCATTCCA+TGG 0.468298 8_2:+15723491 None:intergenic
CAGGGAGAGGAGAGAGAGTG+TGG 0.469257 8_2:+15723442 None:intergenic
CCAGTAATCAGCTTAAGATT+CGG 0.472206 8_2:+15721011 None:intergenic
TTTCTCGGCAAGAACAAGAC+AGG 0.475623 8_2:-15720866 Msa1236640:CDS
TGTTCATCATAGTTTGTTTG+CGG 0.478214 8_2:-15722491 Msa1236640:CDS
TAGTAAAGGACGAGGGTGGC+AGG 0.478712 8_2:-15721892 Msa1236640:CDS
TGCTCAACAAGCGGAAATGC+AGG 0.478829 8_2:+15719241 None:intergenic
GAGAGTGTGGAGGAAGCATT+CGG 0.480598 8_2:+15723455 None:intergenic
TGGAGTAGACGCACAAGGGC+AGG 0.484502 8_2:+15721383 None:intergenic
CTCAGGATCTGTGCTGGGAT+GGG 0.485325 8_2:-15719534 Msa1236640:intron
TCTACAAAGAAGGCTGCAAC+CGG 0.487821 8_2:-15722163 Msa1236640:CDS
AGTAGCCGGTCTTGTGAAGC+GGG 0.488425 8_2:-15721624 Msa1236640:CDS
CTCAAACAGATAATGGTTGA+AGG 0.488910 8_2:+15721649 None:intergenic
AACCACTCAAATGTTGCAAA+AGG 0.489513 8_2:+15719484 None:intergenic
AGTGCACCTGCCTTAAGCAT+TGG 0.489711 8_2:+15722052 None:intergenic
GTTGCTCGAATTTGCATTGA+GGG 0.490878 8_2:-15721719 Msa1236640:CDS
ACTAGTTATCCTTCTCTTGA+GGG 0.494715 8_2:-15722727 Msa1236640:CDS
AAGATCTGTGGAGACATAAC+CGG 0.495143 8_2:+15722144 None:intergenic
AGCAACGCTGTCTGATTCAC+AGG 0.503224 8_2:+15720639 None:intergenic
CTTTGGTCAGTCTATCCCCT+TGG 0.503293 8_2:+15721327 None:intergenic
ATCACGATTTCCCCAAATCA+TGG 0.503511 8_2:-15723137 Msa1236640:CDS
TGGAGACTCACAAATGAGTC+TGG 0.504113 8_2:+15720953 None:intergenic
TAATTCTCAGGATCTGTGCT+GGG 0.504229 8_2:-15719539 Msa1236640:intron
TGCATGTAGATTGGTGGGAT+GGG 0.505019 8_2:+15721458 None:intergenic
CCCAATCCTCGATTCCGAAA+AGG 0.505753 8_2:-15723250 Msa1236640:CDS
GAATGAGTATCCAATGCTTA+AGG 0.506930 8_2:-15722062 Msa1236640:CDS
TCTCAGGATCTGTGCTGGGA+TGG 0.508425 8_2:-15719535 Msa1236640:intron
TGAGAAACTCTTAATAGTAA+AGG 0.508710 8_2:-15721906 Msa1236640:CDS
AGGGAACTGTGCACAAAGCT+GGG 0.510033 8_2:+15720698 None:intergenic
GCATCAAGCACTTCTGATCA+AGG 0.510248 8_2:-15721275 Msa1236640:CDS
GAGGGTGGCAGGCTACGTTA+TGG 0.511357 8_2:-15721881 Msa1236640:CDS
TGTGGATGAGCTTAGGGCTG+CGG 0.511547 8_2:-15722683 Msa1236640:CDS
GCAAGTAACTGAAATGCGTA+TGG 0.512567 8_2:+15721506 None:intergenic
TACTAGTTATCCTTCTCTTG+AGG 0.515638 8_2:-15722728 Msa1236640:CDS
GGCGAGGGCGAAGTTAGGTT+GGG 0.516568 8_2:+15723377 None:intergenic
TGGGATTGAGCATTACTGTC+TGG 0.518638 8_2:-15719515 Msa1236640:three_prime_UTR
ACAGATAATGGTTGAAGGTG+GGG 0.520696 8_2:+15721654 None:intergenic
ATGACTTGAGGGAACCTCCC+AGG 0.521093 8_2:+15720678 None:intergenic
TTCCAGATATTAATGATCCC+CGG 0.522021 8_2:-15720743 Msa1236640:CDS
TGTGAAGCGGGCTTCGGAGA+GGG 0.523126 8_2:-15721612 Msa1236640:CDS
CCAGATATTGCAGAAAATGT+AGG 0.524692 8_2:-15720822 Msa1236640:CDS
AATGCAGGAAATTGGGGAAA+GGG 0.526890 8_2:+15719256 None:intergenic
CATTTGCAGTGATGACTTGA+GGG 0.527183 8_2:+15720667 None:intergenic
CCGAAGCCCTAGCTATCATC+GGG 0.527980 8_2:-15723161 Msa1236640:CDS
CCCCAGGATGCAGAAGCTGC+AGG 0.528376 8_2:+15720918 None:intergenic
TCCGAAGCCCTAGCTATCAT+CGG 0.530404 8_2:-15723162 Msa1236640:CDS
GACGAGACGGAGGACGGCGA+GGG 0.536397 8_2:+15723362 None:intergenic
ACTCCAGGCCTTCCTTCAAA+AGG 0.538342 8_2:-15721366 Msa1236640:CDS
TCACTGTTTCTGGTTAAGCA+TGG 0.538604 8_2:-15721110 Msa1236640:CDS
AACAGATAATGGTTGAAGGT+GGG 0.538694 8_2:+15721653 None:intergenic
GGTCTCTCTTTCTACAAAGA+AGG 0.540099 8_2:-15722173 Msa1236640:CDS
ATAGTTTGTTTGCGGCCGAT+GGG 0.540550 8_2:-15722483 Msa1236640:CDS
TCTTTATATGGAGAAGAATG+AGG 0.540847 8_2:-15722644 Msa1236640:CDS
GATAGACTGACCAAAGTACT+TGG 0.541303 8_2:-15721320 Msa1236640:CDS
AGTTGACGGCAGCGGCTTGA+CGG 0.542493 8_2:+15723313 None:intergenic
CTGCATGTAGATTGGTGGGA+TGG 0.546010 8_2:+15721457 None:intergenic
GCCCAAATGTGAGAAACATA+AGG 0.547648 8_2:+15721200 None:intergenic
AACTAATGCTCGGTTGTAAG+TGG 0.547807 8_2:+15720605 None:intergenic
GGATCATATGAATGAATGGA+TGG 0.549813 8_2:-15722773 Msa1236640:CDS
ATGTAGATTGGTGGGATGGG+TGG 0.550873 8_2:+15721461 None:intergenic
TCCAGATATTAATGATCCCC+GGG 0.552430 8_2:-15720742 Msa1236640:CDS
CGAAGCCCGCTTCACAAGAC+CGG 0.554051 8_2:+15721619 None:intergenic
TCAAATGTTGCAAAAGGCTG+AGG 0.555939 8_2:+15719490 None:intergenic
ACATTTGCAGTGATGACTTG+AGG 0.556182 8_2:+15720666 None:intergenic
TGTTATGAAATGTATTATGA+GGG 0.556990 8_2:-15721771 Msa1236640:CDS
GGTTATCTTCAGCGGACCAA+CGG 0.558438 8_2:+15723271 None:intergenic
AATATCTGCATGTAGATTGG+TGG 0.558745 8_2:+15721452 None:intergenic
GCAGAAGTATACTCGAAAGT+AGG 0.559104 8_2:+15719449 None:intergenic
TTGCTTGTGAGTTGCTTAAG+GGG 0.562415 8_2:-15722321 Msa1236640:CDS
CAGTAGCCGGTCTTGTGAAG+CGG 0.563321 8_2:-15721625 Msa1236640:CDS
TGATTCCGAATGTGAGGTTG+AGG 0.563458 8_2:-15722432 Msa1236640:CDS
CGGACCAACGGAGACGGAGG+TGG 0.565978 8_2:+15723283 None:intergenic
GGCGAAGTTAGGTTGGGAGG+AGG 0.567027 8_2:+15723383 None:intergenic
ACGGATCTGATCGGAGATGG+AGG 0.567473 8_2:+15723332 None:intergenic
TTGACGGATCTGATCGGAGA+TGG 0.567532 8_2:+15723329 None:intergenic
AGCGGAAATGCAGGAAATTG+GGG 0.572270 8_2:+15719250 None:intergenic
ACTGATTCTCTTCAGACTCT+GGG 0.573743 8_2:+15721795 None:intergenic
GAGTATCCAATGCTTAAGGC+AGG 0.575297 8_2:-15722058 Msa1236640:CDS
ATATTTAAGTAAATGTCAGA+AGG 0.575750 8_2:-15719161 Msa1236640:three_prime_UTR
TATCTGTTTGAGTCAGTAGC+CGG 0.575956 8_2:-15721638 Msa1236640:CDS
ATGAGAATAACAGTAAATCT+CGG 0.576138 8_2:+15719353 None:intergenic
AGAACAAGACAGGGTTGAGG+AGG 0.576975 8_2:-15720856 Msa1236640:CDS
ATTATACCGCAGATTTGTCA+GGG 0.577085 8_2:-15722460 Msa1236640:CDS
TCGCACTAAATATATCAGGC+TGG 0.577096 8_2:+15721054 None:intergenic
GGATTGTGCGATATATTTGG+TGG 0.577400 8_2:-15722194 Msa1236640:CDS
TTCAGCGACGAGACGGAGGA+CGG 0.581545 8_2:+15723356 None:intergenic
TATCAAAAGAAGTAGCATTG+AGG 0.583401 8_2:-15722000 Msa1236640:CDS
ATCGCACATTCACCATGGAA+TGG 0.583806 8_2:-15723503 Msa1236640:exon
AATCACTGCCATTTGCTCAA+AGG 0.584363 8_2:+15719212 None:intergenic
ATCATATTGAGTATATTAGG+AGG 0.584593 8_2:-15722381 Msa1236640:CDS
GAAGCGAGGGCCATGATTTG+GGG 0.585140 8_2:+15723127 None:intergenic
GACAGTATTATTTCAAGCCG+AGG 0.585780 8_2:+15721551 None:intergenic
AGTGAGTGTGAAATATATAA+CGG 0.586562 8_2:+15723575 None:intergenic
TTTGGTTCGTTTCCTTGCTG+CGG 0.587294 8_2:-15721966 Msa1236640:CDS
CGCGTCGTTGATTGACGCTG+CGG 0.589913 8_2:-15722911 Msa1236640:CDS
GAGGATTCGGCGTGGCGGCG+GGG 0.590284 8_2:+15723417 None:intergenic
CGACGAGACGGAGGACGGCG+AGG 0.590663 8_2:+15723361 None:intergenic
GAGGTTGAGGGAGGATGATG+AGG 0.591211 8_2:-15722419 Msa1236640:CDS
TGCATCCTGGGGTAAAATGG+TGG 0.591851 8_2:-15720907 Msa1236640:CDS
TAATTGCCGTAACCGCAAGC+TGG 0.592087 8_2:+15722539 None:intergenic
TCAGCACTCCCCTCAAGAGA+AGG 0.592983 8_2:+15722718 None:intergenic
AGGCCTGGAGTAGACGCACA+AGG 0.593702 8_2:+15721378 None:intergenic
GGGATCATTAATATCTGGAA+GGG 0.594843 8_2:+15720746 None:intergenic
AAACTGACTAAAATTAAACA+TGG 0.595245 8_2:+15719122 None:intergenic
AAACAGATAATGGTTGAAGG+TGG 0.595794 8_2:+15721652 None:intergenic
AACTTACTCAAACTAATGCT+CGG 0.596616 8_2:+15720595 None:intergenic
AATTTCTGTGACTCGAAAAG+GGG 0.597237 8_2:+15722850 None:intergenic
TGACTTGAGGGAACCTCCCA+GGG 0.597802 8_2:+15720679 None:intergenic
GTATACTCGAAAGTAGGCAG+AGG 0.598469 8_2:+15719455 None:intergenic
AACAAGTTCCGGAAGAAGCG+AGG 0.599510 8_2:+15723113 None:intergenic
GGAGAGGAGAGAGAGTGTGG+AGG 0.600742 8_2:+15723445 None:intergenic
AAATGCAGGAAATTGGGGAA+AGG 0.601789 8_2:+15719255 None:intergenic
TGGAGGGTTCAGCGACGAGA+CGG 0.603655 8_2:+15723349 None:intergenic
GGATCATTAATATCTGGAAG+GGG 0.603768 8_2:+15720747 None:intergenic
AAGCTCCTTTAATGCAAACC+CGG 0.603899 8_2:-15722236 Msa1236640:CDS
ACAAGTTCCGGAAGAAGCGA+GGG 0.604193 8_2:+15723114 None:intergenic
CGGATCTGATCGGAGATGGA+GGG 0.605850 8_2:+15723333 None:intergenic
TGCAGGAAATTGGGGAAAGG+GGG 0.607711 8_2:+15719258 None:intergenic
TTAGAGAGCTCCAGAGAAGG+CGG 0.607962 8_2:-15721169 Msa1236640:CDS
TTCTCGGCAAGAACAAGACA+GGG 0.608184 8_2:-15720865 Msa1236640:CDS
TCATATTGAGTATATTAGGA+GGG 0.608345 8_2:-15722380 Msa1236640:CDS
GCACCAAATGAGATCAGCCA+AGG 0.608644 8_2:-15721344 Msa1236640:CDS
AGCGGCTTGACGGATCTGAT+CGG 0.609749 8_2:+15723323 None:intergenic
TATATTAGGAGGGATATGGA+AGG 0.611021 8_2:-15722370 Msa1236640:CDS
CCCTAATCGCACATTCACCA+TGG 0.613496 8_2:-15723508 Msa1236640:exon
TTGGTGGCGGAGAGCATGAG+AGG 0.615233 8_2:+15723204 None:intergenic
AAAACCACCTCCGTCTCCGT+TGG 0.615604 8_2:-15723287 Msa1236640:CDS
TGTTGCTCGAATTTGCATTG+AGG 0.616016 8_2:-15721720 Msa1236640:CDS
ACTAAATATATCAGGCTGGA+CGG 0.616909 8_2:+15721058 None:intergenic
CTAGTTATCCTTCTCTTGAG+GGG 0.618255 8_2:-15722726 Msa1236640:CDS
ACTCTTAATAGTAAAGGACG+AGG 0.618274 8_2:-15721900 Msa1236640:CDS
GTGATCTTGATACAAGGAGG+AGG 0.620319 8_2:-15722345 Msa1236640:CDS
GATTCCGAATGTGAGGTTGA+GGG 0.620733 8_2:-15722431 Msa1236640:CDS
ACAGTATTATTTCAAGCCGA+GGG 0.621118 8_2:+15721552 None:intergenic
CAAGTAACTGAAATGCGTAT+GGG 0.621742 8_2:+15721507 None:intergenic
CTTCAGCGGACCAACGGAGA+CGG 0.622307 8_2:+15723277 None:intergenic
CACCAAATGAGATCAGCCAA+GGG 0.623350 8_2:-15721343 Msa1236640:CDS
ATTGTAAAGTTGGACGAAGG+TGG 0.623656 8_2:+15720791 None:intergenic
TTGTGAAGCGGGCTTCGGAG+AGG 0.626448 8_2:-15721613 Msa1236640:CDS
ATATCTGCATGTAGATTGGT+GGG 0.627188 8_2:+15721453 None:intergenic
TTGAACATCAACAAGATCTG+TGG 0.627448 8_2:+15722132 None:intergenic
TATTTAAGTAAATGTCAGAA+GGG 0.628117 8_2:-15719160 Msa1236640:three_prime_UTR
GAGGATTGGGTTATCTTCAG+CGG 0.631308 8_2:+15723263 None:intergenic
TTTGTGCACAGTTCCCTGGG+AGG 0.632283 8_2:-15720692 Msa1236640:CDS
TCCAACTTTACAATGCTGGA+AGG 0.632984 8_2:-15720782 Msa1236640:CDS
AAACCCGGTGGCGAATTGGA+AGG 0.633015 8_2:-15722221 Msa1236640:CDS
CCTGCAGCTTCTGCATCCTG+GGG 0.635126 8_2:-15720918 Msa1236640:CDS
AGGCATGCATGCTCAACAAG+CGG 0.635282 8_2:+15719232 None:intergenic
AAGGTAGTGATCTTGATACA+AGG 0.638914 8_2:-15722351 Msa1236640:CDS
GTGATTCCCGATGATAGCTA+GGG 0.638935 8_2:+15723155 None:intergenic
CAGCGGACCAACGGAGACGG+AGG 0.640762 8_2:+15723280 None:intergenic
ACCGCATAAAATCACGACAC+TGG 0.642109 8_2:+15719382 None:intergenic
GGGGATCATTAATATCTGGA+AGG 0.642825 8_2:+15720745 None:intergenic
GACTAGTCGTGACCAGCTTG+CGG 0.643562 8_2:-15722551 Msa1236640:CDS
AAGATTCGGAATCCAGAACT+GGG 0.643798 8_2:+15721025 None:intergenic
TTGCTCGAATTTGCATTGAG+GGG 0.644156 8_2:-15721718 Msa1236640:CDS
GCAAGAACAAGACAGGGTTG+AGG 0.647585 8_2:-15720859 Msa1236640:CDS
CAACATTCGACTCCGCAGCA+AGG 0.650912 8_2:+15721954 None:intergenic
GGCCTGGAGTAGACGCACAA+GGG 0.654528 8_2:+15721379 None:intergenic
TTATATGGAGAAGAATGAGG+AGG 0.657740 8_2:-15722641 Msa1236640:CDS
TGAATATCAAGAGAGACTTG+AGG 0.658051 8_2:+15721135 None:intergenic
GATCATATGAATGAATGGAT+GGG 0.659145 8_2:-15722772 Msa1236640:CDS
AATCTGCGGTATAATCCCAT+CGG 0.662771 8_2:+15722468 None:intergenic
AGCATTGTAAAGTTGGACGA+AGG 0.671018 8_2:+15720788 None:intergenic
AGGGTTCAGCGACGAGACGG+AGG 0.675337 8_2:+15723352 None:intergenic
AGAGAGAGGATTCGGCGTGG+CGG 0.684559 8_2:+15723412 None:intergenic
TTATACCGCAGATTTGTCAG+GGG 0.685030 8_2:-15722459 Msa1236640:CDS
TGTGGAGGAAGCATTCGGAG+AGG 0.686501 8_2:+15723460 None:intergenic
TTAATAGTAAAGGACGAGGG+TGG 0.686705 8_2:-15721896 Msa1236640:CDS
GGATTGTGATTCCGAATGTG+AGG 0.687428 8_2:-15722438 Msa1236640:CDS
CTCCTTTAATGCAAACCCGG+TGG 0.691872 8_2:-15722233 Msa1236640:CDS
CGCAGCGTCAATCAACGACG+CGG 0.696713 8_2:+15722912 None:intergenic
TCCGAATGTGAGGTTGAGGG+AGG 0.708339 8_2:-15722428 Msa1236640:CDS
GATCATTAATATCTGGAAGG+GGG 0.710644 8_2:+15720748 None:intergenic
ACAATCCCCTGACAAATCTG+CGG 0.710797 8_2:+15722454 None:intergenic
GTAGTGATCTTGATACAAGG+AGG 0.711592 8_2:-15722348 Msa1236640:CDS
CTCTTAATAGTAAAGGACGA+GGG 0.713370 8_2:-15721899 Msa1236640:CDS
ACCAAATGAGATCAGCCAAG+GGG 0.717940 8_2:-15721342 Msa1236640:CDS
GGTGGCGAATTGGAAGGACA+AGG 0.722542 8_2:-15722215 Msa1236640:CDS
AGGAGAGAGAGGATTCGGCG+TGG 0.725402 8_2:+15723409 None:intergenic
GAGGGCGAAGTTAGGTTGGG+AGG 0.730306 8_2:+15723380 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAATATTGTTGTTATA+TGG - chr8_2:15723505-15723524 Msa1236640:exon 10.0%
!!! TAAAAATATTGTTGTTATAT+GGG - chr8_2:15723506-15723525 Msa1236640:exon 10.0%
!! AAAACGAAATTTCTTAAAAA+TGG + chr8_2:15719589-15719608 None:intergenic 15.0%
!! TGAGAATATTAATCTTTATA+TGG - chr8_2:15719950-15719969 Msa1236640:intron 15.0%
!! TGTATCTCAAAATATATTAA+GGG + chr8_2:15722108-15722127 None:intergenic 15.0%
!! ATGTATCTCAAAATATATTA+AGG + chr8_2:15722109-15722128 None:intergenic 15.0%
!! AGATATAAATAGACAAAAAA+GGG + chr8_2:15722330-15722349 None:intergenic 15.0%
!! TGAAATTATATAAAGATTGA+TGG + chr8_2:15722716-15722735 None:intergenic 15.0%
!!! AAAAAAATCATGTTACTTTT+AGG - chr8_2:15722997-15723016 Msa1236640:CDS 15.0%
!!! TTTAGTGTAAATTTTTTTCA+TGG - chr8_2:15723325-15723344 Msa1236640:CDS 15.0%
!!! AATGAATTTTTTTTAAGCAA+AGG + chr8_2:15723547-15723566 None:intergenic 15.0%
!! TGAATCATATTGAGTATATT+AGG - chr8_2:15720222-15720241 Msa1236640:intron 20.0%
!! ATGTTATGAAATGTATTATG+AGG - chr8_2:15720834-15720853 Msa1236640:CDS 20.0%
!! TGTTATGAAATGTATTATGA+GGG - chr8_2:15720835-15720854 Msa1236640:CDS 20.0%
!! AATATATTAAGGGTAGATTA+AGG + chr8_2:15722098-15722117 None:intergenic 20.0%
!! ATACAGAATAAAATAACAAC+TGG + chr8_2:15722154-15722173 None:intergenic 20.0%
!! GTAATATTTATCTGCTTTAT+TGG - chr8_2:15722264-15722283 Msa1236640:CDS 20.0%
!! CAGATATAAATAGACAAAAA+AGG + chr8_2:15722331-15722350 None:intergenic 20.0%
!!! TTTCCATGTTTCATTTTATA+TGG - chr8_2:15722446-15722465 Msa1236640:CDS 20.0%
!!! TTCCATGTTTCATTTTATAT+GGG - chr8_2:15722447-15722466 Msa1236640:CDS 20.0%
!!! GAGTCATCTAAAATATATTA+TGG - chr8_2:15722470-15722489 Msa1236640:CDS 20.0%
!! AATTTAAATACTAAACATCC+AGG + chr8_2:15722645-15722664 None:intergenic 20.0%
!! CAATCTTTATATAATTTCAC+CGG - chr8_2:15722717-15722736 Msa1236640:CDS 20.0%
!! ATATTTAAGTAAATGTCAGA+AGG - chr8_2:15723445-15723464 Msa1236640:CDS 20.0%
!! TATTTAAGTAAATGTCAGAA+GGG - chr8_2:15723446-15723465 Msa1236640:CDS 20.0%
!! AAACTGACTAAAATTAAACA+TGG + chr8_2:15723487-15723506 None:intergenic 20.0%
!!! AACAAATTTTGAGAAAAATG+TGG + chr8_2:15723582-15723601 None:intergenic 20.0%
! AGTGAGTGTGAAATATATAA+CGG + chr8_2:15719034-15719053 None:intergenic 25.0%
! TTTCTTAAAAATGGAATTCG+CGG + chr8_2:15719580-15719599 None:intergenic 25.0%
! ATCATATTGAGTATATTAGG+AGG - chr8_2:15720225-15720244 Msa1236640:intron 25.0%
! TCATATTGAGTATATTAGGA+GGG - chr8_2:15720226-15720245 Msa1236640:intron 25.0%
!!! CTTCTTTTGATATTTGAGAT+CGG + chr8_2:15720598-15720617 None:intergenic 25.0%
! TGAGAAACTCTTAATAGTAA+AGG - chr8_2:15720700-15720719 Msa1236640:CDS 25.0%
! GAAAAATTCAGTTACATCAT+TGG + chr8_2:15721080-15721099 None:intergenic 25.0%
! AAAATCGCACTAAATATATC+AGG + chr8_2:15721559-15721578 None:intergenic 25.0%
! ATGAAGAAACAAAAAATTCC+CGG + chr8_2:15721885-15721904 None:intergenic 25.0%
!!! GGAATTTTTTGTTTCTTCAT+TGG - chr8_2:15721885-15721904 Msa1236640:CDS 25.0%
! AACGATATATAAAGCTTGAT+TGG + chr8_2:15722203-15722222 None:intergenic 25.0%
!! TCCATGTTTCATTTTATATG+GGG - chr8_2:15722448-15722467 Msa1236640:CDS 25.0%
! CTAGATTGAAATATTGTGAA+AGG - chr8_2:15722527-15722546 Msa1236640:CDS 25.0%
! AATACATGATTACAGTGATA+CGG + chr8_2:15722554-15722573 None:intergenic 25.0%
! CACATATACAAGCTATTTAT+TGG + chr8_2:15722765-15722784 None:intergenic 25.0%
!!! TATGTGATTGAGTTTTTTCT+TGG - chr8_2:15722779-15722798 Msa1236640:CDS 25.0%
! GAGAAAGATAATAAACTGTT+TGG - chr8_2:15722810-15722829 Msa1236640:CDS 25.0%
!!! AGGCATTTATTTTAATTCTC+AGG - chr8_2:15723055-15723074 Msa1236640:CDS 25.0%
! ATGAGAATAACAGTAAATCT+CGG + chr8_2:15723256-15723275 None:intergenic 25.0%
!! ATTCTCATTTTGAATTCTGT+AGG - chr8_2:15723268-15723287 Msa1236640:CDS 25.0%
! GAAGTTTGGGTTTGAAAAAA+TGG + chr8_2:15719057-15719076 None:intergenic 30.0%
TGAGAAGAAAAGAGAAGTTT+GGG + chr8_2:15719070-15719089 None:intergenic 30.0%
TTGAGAAGAAAAGAGAAGTT+TGG + chr8_2:15719071-15719090 None:intergenic 30.0%
!!! GGTTTTGATTTGTTCCTTTT+CGG + chr8_2:15719373-15719392 None:intergenic 30.0%
!! GCTTGATTTGAAGTATTGTT+TGG - chr8_2:15719632-15719651 Msa1236640:intron 30.0%
TTGAGAAAAATCTCAAGCAA+AGG + chr8_2:15719672-15719691 None:intergenic 30.0%
ATATGATCCTCAAAAAACTC+AGG + chr8_2:15719822-15719841 None:intergenic 30.0%
TTGAGGATCATATGAATGAA+TGG - chr8_2:15719829-15719848 Msa1236640:intron 30.0%
GATCATATGAATGAATGGAT+GGG - chr8_2:15719834-15719853 Msa1236640:intron 30.0%
TCTTTATATGGAGAAGAATG+AGG - chr8_2:15719962-15719981 Msa1236640:intron 30.0%
!! TGTTCATCATAGTTTGTTTG+CGG - chr8_2:15720115-15720134 Msa1236640:intron 30.0%
TATCAAAAGAAGTAGCATTG+AGG - chr8_2:15720606-15720625 Msa1236640:CDS 30.0%
! ATTGAGGTTTTTACCTGATT+TGG - chr8_2:15720622-15720641 Msa1236640:CDS 30.0%
AAATGTATTATGAGGGTTCT+TGG - chr8_2:15720842-15720861 Msa1236640:CDS 30.0%
TCAAATATCTGCATGTAGAT+TGG + chr8_2:15721160-15721179 None:intergenic 30.0%
TGAAGAAACAAAAAATTCCC+GGG + chr8_2:15721884-15721903 None:intergenic 30.0%
AACTTACTCAAACTAATGCT+CGG + chr8_2:15722014-15722033 None:intergenic 30.0%
!! TCTGTTTTGAATGTGCTTAT+TGG - chr8_2:15722053-15722072 Msa1236640:CDS 30.0%
! TGTATTCATCTCAGTTCTTT+TGG - chr8_2:15722169-15722188 Msa1236640:CDS 30.0%
TGCACTAAAATTTGCAAGAA+CGG - chr8_2:15722373-15722392 Msa1236640:CDS 30.0%
TCCCCATATAAAATGAAACA+TGG + chr8_2:15722452-15722471 None:intergenic 30.0%
TGGATTTCTCATTGAACTTA+AGG - chr8_2:15722490-15722509 Msa1236640:CDS 30.0%
!!! TGATTGAGTTTTTTCTTGGT+TGG - chr8_2:15722783-15722802 Msa1236640:CDS 30.0%
! TTCATCTTTCTCCTTTTGTT+TGG - chr8_2:15722859-15722878 Msa1236640:CDS 30.0%
AGACTTATATATGCTTCTGA+AGG - chr8_2:15722923-15722942 Msa1236640:CDS 30.0%
GACTTATATATGCTTCTGAA+GGG - chr8_2:15722924-15722943 Msa1236640:CDS 30.0%
TAAACATGTGATCTCTAATC+AGG - chr8_2:15723035-15723054 Msa1236640:CDS 30.0%
TAAAATCCCAATAGACCAAA+TGG + chr8_2:15723309-15723328 None:intergenic 30.0%
TTGAGAAAAATGTGGATTTG+AGG + chr8_2:15723574-15723593 None:intergenic 30.0%
!! CTTGTTGCTAGTCTTCAAAA+AGG - chr8_2:15719510-15719529 Msa1236640:three_prime_UTR 35.0%
! ACCATTGATTGAAGCGTAAT+CGG + chr8_2:15719547-15719566 None:intergenic 35.0%
!! AAAAGGGGTTTTAGTGTTTC+TGG + chr8_2:15719744-15719763 None:intergenic 35.0%
AATTTCTGTGACTCGAAAAG+GGG + chr8_2:15719759-15719778 None:intergenic 35.0%
CAATTTCTGTGACTCGAAAA+GGG + chr8_2:15719760-15719779 None:intergenic 35.0%
ACAATTTCTGTGACTCGAAA+AGG + chr8_2:15719761-15719780 None:intergenic 35.0%
AGTCACAGAAATTGTGTTGT+AGG - chr8_2:15719766-15719785 Msa1236640:intron 35.0%
GGATCATATGAATGAATGGA+TGG - chr8_2:15719833-15719852 Msa1236640:intron 35.0%
TACTAGTTATCCTTCTCTTG+AGG - chr8_2:15719878-15719897 Msa1236640:intron 35.0%
ACTAGTTATCCTTCTCTTGA+GGG - chr8_2:15719879-15719898 Msa1236640:intron 35.0%
TTATATGGAGAAGAATGAGG+AGG - chr8_2:15719965-15719984 Msa1236640:intron 35.0%
! GGCAATTAAGTTTTTGACGA+CGG - chr8_2:15720082-15720101 Msa1236640:intron 35.0%
ATTATACCGCAGATTTGTCA+GGG - chr8_2:15720146-15720165 Msa1236640:intron 35.0%
TGAGTATATTAGGAGGGATA+TGG - chr8_2:15720232-15720251 Msa1236640:intron 35.0%
TATATTAGGAGGGATATGGA+AGG - chr8_2:15720236-15720255 Msa1236640:intron 35.0%
AAGGTAGTGATCTTGATACA+AGG - chr8_2:15720255-15720274 Msa1236640:intron 35.0%
ATTGCTTGTGAGTTGCTTAA+GGG - chr8_2:15720284-15720303 Msa1236640:intron 35.0%
CAAGGATTGTGCGATATATT+TGG - chr8_2:15720409-15720428 Msa1236640:intron 35.0%
TTGAACATCAACAAGATCTG+TGG + chr8_2:15720477-15720496 None:intergenic 35.0%
GAATGAGTATCCAATGCTTA+AGG - chr8_2:15720544-15720563 Msa1236640:intron 35.0%
ACTCTTAATAGTAAAGGACG+AGG - chr8_2:15720706-15720725 Msa1236640:CDS 35.0%
CTCTTAATAGTAAAGGACGA+GGG - chr8_2:15720707-15720726 Msa1236640:CDS 35.0%
! TTCATCAGCATTGAGAAAAC+TGG + chr8_2:15720767-15720786 None:intergenic 35.0%
! AACAGATAATGGTTGAAGGT+GGG + chr8_2:15720956-15720975 None:intergenic 35.0%
! AAACAGATAATGGTTGAAGG+TGG + chr8_2:15720957-15720976 None:intergenic 35.0%
! CTCAAACAGATAATGGTTGA+AGG + chr8_2:15720960-15720979 None:intergenic 35.0%
!! CTACTGACTCAAACAGATAA+TGG + chr8_2:15720967-15720986 None:intergenic 35.0%
CAAAAACAGACACAAGAGTT+GGG + chr8_2:15721021-15721040 None:intergenic 35.0%
TCAAAAACAGACACAAGAGT+TGG + chr8_2:15721022-15721041 None:intergenic 35.0%
ACAGTATTATTTCAAGCCGA+GGG + chr8_2:15721057-15721076 None:intergenic 35.0%
CAAGTAACTGAAATGCGTAT+GGG + chr8_2:15721102-15721121 None:intergenic 35.0%
ATATCTGCATGTAGATTGGT+GGG + chr8_2:15721156-15721175 None:intergenic 35.0%
AATATCTGCATGTAGATTGG+TGG + chr8_2:15721157-15721176 None:intergenic 35.0%
! TTCTTTTGTCACCTGATTCT+TGG - chr8_2:15721182-15721201 Msa1236640:CDS 35.0%
GTCAAATATGCCAAGTACTT+TGG + chr8_2:15721299-15721318 None:intergenic 35.0%
GCCTTATGTTTCTCACATTT+GGG - chr8_2:15721405-15721424 Msa1236640:CDS 35.0%
TGAATATCAAGAGAGACTTG+AGG + chr8_2:15721474-15721493 None:intergenic 35.0%
GATATTCAGTTCACTGTTTC+TGG - chr8_2:15721486-15721505 Msa1236640:CDS 35.0%
ACTAAATATATCAGGCTGGA+CGG + chr8_2:15721551-15721570 None:intergenic 35.0%
CCAGTAATCAGCTTAAGATT+CGG + chr8_2:15721598-15721617 None:intergenic 35.0%
GTATTGTGACACTTCTTTCT+CGG - chr8_2:15721725-15721744 Msa1236640:CDS 35.0%
! CCTACATTTTCTGCAATATC+TGG + chr8_2:15721787-15721806 None:intergenic 35.0%
CCAGATATTGCAGAAAATGT+AGG - chr8_2:15721784-15721803 Msa1236640:CDS 35.0%
GATCATTAATATCTGGAAGG+GGG + chr8_2:15721861-15721880 None:intergenic 35.0%
GGATCATTAATATCTGGAAG+GGG + chr8_2:15721862-15721881 None:intergenic 35.0%
GGGATCATTAATATCTGGAA+GGG + chr8_2:15721863-15721882 None:intergenic 35.0%
TTCCAGATATTAATGATCCC+CGG - chr8_2:15721863-15721882 Msa1236640:CDS 35.0%
GAAGAAACAAAAAATTCCCG+GGG + chr8_2:15721883-15721902 None:intergenic 35.0%
! GAGCATTAGTTTGAGTAAGT+TGG - chr8_2:15722013-15722032 Msa1236640:CDS 35.0%
GGTAGATTAAGGAAAAGTCA+TGG + chr8_2:15722087-15722106 None:intergenic 35.0%
CAAAATACCCACAGCTAAAA+GGG + chr8_2:15722228-15722247 None:intergenic 35.0%
! TTTATTGGTAGCAACTAGCA+AGG - chr8_2:15722279-15722298 Msa1236640:CDS 35.0%
! TTATTGGTAGCAACTAGCAA+GGG - chr8_2:15722280-15722299 Msa1236640:CDS 35.0%
! TATGTCTCTTTTGTTCCTCT+TGG - chr8_2:15722407-15722426 Msa1236640:CDS 35.0%
!! TTTTGTTCCTCTTGGTTTGA+TGG - chr8_2:15722415-15722434 Msa1236640:CDS 35.0%
ACACTATGGAAGTCAATGAT+GGG + chr8_2:15722592-15722611 None:intergenic 35.0%
CGCAAAATGAATTCACACTA+TGG + chr8_2:15722606-15722625 None:intergenic 35.0%
!!! TTGAGTTTTTTCTTGGTTGG+AGG - chr8_2:15722786-15722805 Msa1236640:CDS 35.0%
!! ATCTTTCTCCTTTTGTTTGG+TGG - chr8_2:15722862-15722881 Msa1236640:CDS 35.0%
!! TCTTTCTCCTTTTGTTTGGT+GGG - chr8_2:15722863-15722882 Msa1236640:CDS 35.0%
AACCACTCAAATGTTGCAAA+AGG + chr8_2:15723125-15723144 None:intergenic 35.0%
!! AGTTTGTTGGTTCCATTCCA+TGG + chr8_2:15719118-15719137 None:intergenic 40.0%
AGAGGAATTGGAGAGTTTGT+TGG + chr8_2:15719131-15719150 None:intergenic 40.0%
!!! GAGGTGGTTTTTGAAGTTGA+CGG + chr8_2:15719310-15719329 None:intergenic 40.0%
! TTTGTTCCTTTTCGGAATCG+AGG + chr8_2:15719365-15719384 None:intergenic 40.0%
!! AGATTGGATTTTGTTGGTGG+CGG + chr8_2:15719418-15719437 None:intergenic 40.0%
! CTGAGATTGGATTTTGTTGG+TGG + chr8_2:15719421-15719440 None:intergenic 40.0%
! GAGCTGAGATTGGATTTTGT+TGG + chr8_2:15719424-15719443 None:intergenic 40.0%
ATCACGATTTCCCCAAATCA+TGG - chr8_2:15719469-15719488 Msa1236640:three_prime_UTR 40.0%
TGAAGACTAGCAACAAGTTC+CGG + chr8_2:15719507-15719526 None:intergenic 40.0%
TCCGATTACGCTTCAATCAA+TGG - chr8_2:15719543-15719562 Msa1236640:intron 40.0%
!!! TTTTAGTGTTTCTGGTGGTG+GGG + chr8_2:15719736-15719755 None:intergenic 40.0%
!!! GTTTTAGTGTTTCTGGTGGT+GGG + chr8_2:15719737-15719756 None:intergenic 40.0%
!!! AGAGTTGCCTGAGTTTTTTG+AGG - chr8_2:15719812-15719831 Msa1236640:intron 40.0%
ATGAATGGATGGGTGAGTTT+AGG - chr8_2:15719844-15719863 Msa1236640:intron 40.0%
CTAGTTATCCTTCTCTTGAG+GGG - chr8_2:15719880-15719899 Msa1236640:intron 40.0%
GAAGAATGAGGAGGAGTTTA+AGG - chr8_2:15719974-15719993 Msa1236640:intron 40.0%
!!! ATGATTTTGCACTTGCTGTG+TGG - chr8_2:15720006-15720025 Msa1236640:intron 40.0%
TTGCTGTGTGGACTTTGTTA+GGG - chr8_2:15720018-15720037 Msa1236640:intron 40.0%
AATCTGCGGTATAATCCCAT+CGG + chr8_2:15720141-15720160 None:intergenic 40.0%
GATTATACCGCAGATTTGTC+AGG - chr8_2:15720145-15720164 Msa1236640:intron 40.0%
TTATACCGCAGATTTGTCAG+GGG - chr8_2:15720147-15720166 Msa1236640:intron 40.0%
GTAGTGATCTTGATACAAGG+AGG - chr8_2:15720258-15720277 Msa1236640:intron 40.0%
GATTGCTTGTGAGTTGCTTA+AGG - chr8_2:15720283-15720302 Msa1236640:intron 40.0%
TTGCTTGTGAGTTGCTTAAG+GGG - chr8_2:15720285-15720304 Msa1236640:intron 40.0%
AAGCTCCTTTAATGCAAACC+CGG - chr8_2:15720370-15720389 Msa1236640:intron 40.0%
GGATTGTGCGATATATTTGG+TGG - chr8_2:15720412-15720431 Msa1236640:intron 40.0%
GGTCTCTCTTTCTACAAAGA+AGG - chr8_2:15720433-15720452 Msa1236640:intron 40.0%
AAGATCTGTGGAGACATAAC+CGG + chr8_2:15720465-15720484 None:intergenic 40.0%
!!! CATCTGCTTTTTGCAACTCA+GGG + chr8_2:15720523-15720542 None:intergenic 40.0%
!!! ACATCTGCTTTTTGCAACTC+AGG + chr8_2:15720524-15720543 None:intergenic 40.0%
TTAATAGTAAAGGACGAGGG+TGG - chr8_2:15720710-15720729 Msa1236640:CDS 40.0%
! ACTGATTCTCTTCAGACTCT+GGG + chr8_2:15720814-15720833 None:intergenic 40.0%
!! TACTGATTCTCTTCAGACTC+TGG + chr8_2:15720815-15720834 None:intergenic 40.0%
TGTTGCTCGAATTTGCATTG+AGG - chr8_2:15720886-15720905 Msa1236640:CDS 40.0%
GTTGCTCGAATTTGCATTGA+GGG - chr8_2:15720887-15720906 Msa1236640:CDS 40.0%
TTGCTCGAATTTGCATTGAG+GGG - chr8_2:15720888-15720907 Msa1236640:CDS 40.0%
! ACAGATAATGGTTGAAGGTG+GGG + chr8_2:15720955-15720974 None:intergenic 40.0%
TATCTGTTTGAGTCAGTAGC+CGG - chr8_2:15720968-15720987 Msa1236640:CDS 40.0%
! TTGAAACAAGCCTTTTCCCT+CGG - chr8_2:15721038-15721057 Msa1236640:CDS 40.0%
TTATTTCAAGCCGAGGGAAA+AGG + chr8_2:15721051-15721070 None:intergenic 40.0%
GACAGTATTATTTCAAGCCG+AGG + chr8_2:15721058-15721077 None:intergenic 40.0%
GCAAGTAACTGAAATGCGTA+TGG + chr8_2:15721103-15721122 None:intergenic 40.0%
!!! ATTTGGTGCCTTTTGAAGGA+AGG + chr8_2:15721251-15721270 None:intergenic 40.0%
!!! TCTCATTTGGTGCCTTTTGA+AGG + chr8_2:15721255-15721274 None:intergenic 40.0%
! GATAGACTGACCAAAGTACT+TGG - chr8_2:15721286-15721305 Msa1236640:CDS 40.0%
CGCCTTATGTTTCTCACATT+TGG - chr8_2:15721404-15721423 Msa1236640:CDS 40.0%
GCCCAAATGTGAGAAACATA+AGG + chr8_2:15721409-15721428 None:intergenic 40.0%
!! TTTTTAGAGAGCTCCAGAGA+AGG - chr8_2:15721434-15721453 Msa1236640:CDS 40.0%
!! TCACTGTTTCTGGTTAAGCA+TGG - chr8_2:15721496-15721515 Msa1236640:CDS 40.0%
TCGCACTAAATATATCAGGC+TGG + chr8_2:15721555-15721574 None:intergenic 40.0%
AAGATTCGGAATCCAGAACT+GGG + chr8_2:15721584-15721603 None:intergenic 40.0%
TAAGATTCGGAATCCAGAAC+TGG + chr8_2:15721585-15721604 None:intergenic 40.0%
CCGAATCTTAAGCTGATTAC+TGG - chr8_2:15721595-15721614 Msa1236640:CDS 40.0%
ATTGTAAAGTTGGACGAAGG+TGG + chr8_2:15721818-15721837 None:intergenic 40.0%
AGCATTGTAAAGTTGGACGA+AGG + chr8_2:15721821-15721840 None:intergenic 40.0%
TTCGTCCAACTTTACAATGC+TGG - chr8_2:15721820-15721839 Msa1236640:CDS 40.0%
TCCAACTTTACAATGCTGGA+AGG - chr8_2:15721824-15721843 Msa1236640:CDS 40.0%
TCCTTCCAGCATTGTAAAGT+TGG + chr8_2:15721828-15721847 None:intergenic 40.0%
GGGGATCATTAATATCTGGA+AGG + chr8_2:15721864-15721883 None:intergenic 40.0%
TCCAGATATTAATGATCCCC+GGG - chr8_2:15721864-15721883 Msa1236640:CDS 40.0%
CATTTGCAGTGATGACTTGA+GGG + chr8_2:15721942-15721961 None:intergenic 40.0%
ACATTTGCAGTGATGACTTG+AGG + chr8_2:15721943-15721962 None:intergenic 40.0%
AACTAATGCTCGGTTGTAAG+TGG + chr8_2:15722004-15722023 None:intergenic 40.0%
CCAAAATACCCACAGCTAAA+AGG + chr8_2:15722229-15722248 None:intergenic 40.0%
!! CCTTTTAGCTGTGGGTATTT+TGG - chr8_2:15722226-15722245 Msa1236640:CDS 40.0%
GAGTATACCATCAAACCAAG+AGG + chr8_2:15722425-15722444 None:intergenic 40.0%
CACACTATGGAAGTCAATGA+TGG + chr8_2:15722593-15722612 None:intergenic 40.0%
CGAAAATACACAAACTAGCC+TGG - chr8_2:15722624-15722643 Msa1236640:CDS 40.0%
CTTACTACCCACCAAACAAA+AGG + chr8_2:15722873-15722892 None:intergenic 40.0%
TTCACTCCAAACATGAGAAG+AGG + chr8_2:15722978-15722997 None:intergenic 40.0%
TTAATTCTCAGGATCTGTGC+TGG - chr8_2:15723066-15723085 Msa1236640:CDS 40.0%
TAATTCTCAGGATCTGTGCT+GGG - chr8_2:15723067-15723086 Msa1236640:CDS 40.0%
TCAAATGTTGCAAAAGGCTG+AGG + chr8_2:15723119-15723138 None:intergenic 40.0%
! AGCCTTTTGCAACATTTGAG+TGG - chr8_2:15723120-15723139 Msa1236640:CDS 40.0%
! GCAGAAGTATACTCGAAAGT+AGG + chr8_2:15723160-15723179 None:intergenic 40.0%
ATCACGACACTGGCAAAAAT+TGG + chr8_2:15723217-15723236 None:intergenic 40.0%
! CATGTGTTTGAAGTGCCATT+TGG - chr8_2:15723291-15723310 Msa1236640:CDS 40.0%
!! TGAAGTGCCATTTGGTCTAT+TGG - chr8_2:15723299-15723318 Msa1236640:CDS 40.0%
!! GAAGTGCCATTTGGTCTATT+GGG - chr8_2:15723300-15723319 Msa1236640:CDS 40.0%
AATGCAGGAAATTGGGGAAA+GGG + chr8_2:15723353-15723372 None:intergenic 40.0%
AAATGCAGGAAATTGGGGAA+AGG + chr8_2:15723354-15723373 None:intergenic 40.0%
AAGCGGAAATGCAGGAAATT+GGG + chr8_2:15723360-15723379 None:intergenic 40.0%
! AATCACTGCCATTTGCTCAA+AGG + chr8_2:15723397-15723416 None:intergenic 40.0%
CCATGGTGAATGTGCGATTA+GGG + chr8_2:15719101-15719120 None:intergenic 45.0%
TCCATGGTGAATGTGCGATT+AGG + chr8_2:15719102-15719121 None:intergenic 45.0%
ATCGCACATTCACCATGGAA+TGG - chr8_2:15719103-15719122 Msa1236640:three_prime_UTR 45.0%
!!! GTTTTTGAAGTTGACGGCAG+CGG + chr8_2:15719304-15719323 None:intergenic 45.0%
GAGGATTGGGTTATCTTCAG+CGG + chr8_2:15719346-15719365 None:intergenic 45.0%
! CCTTTTCGGAATCGAGGATT+GGG + chr8_2:15719359-15719378 None:intergenic 45.0%
! TCCTTTTCGGAATCGAGGAT+TGG + chr8_2:15719360-15719379 None:intergenic 45.0%
! GAGCATGAGAGGTACGATTA+GGG + chr8_2:15719394-15719413 None:intergenic 45.0%
! AGAGCATGAGAGGTACGATT+AGG + chr8_2:15719395-15719414 None:intergenic 45.0%
GTGATTCCCGATGATAGCTA+GGG + chr8_2:15719454-15719473 None:intergenic 45.0%
!! TTTAGTGTTTCTGGTGGTGG+GGG + chr8_2:15719735-15719754 None:intergenic 45.0%
!!! GGTTTTAGTGTTTCTGGTGG+TGG + chr8_2:15719738-15719757 None:intergenic 45.0%
!!! AGGGGTTTTAGTGTTTCTGG+TGG + chr8_2:15719741-15719760 None:intergenic 45.0%
TTGCTCTTGTGGATGAGCTT+AGG - chr8_2:15719916-15719935 Msa1236640:intron 45.0%
TGCTCTTGTGGATGAGCTTA+GGG - chr8_2:15719917-15719936 Msa1236640:intron 45.0%
! CTTGCTGTGTGGACTTTGTT+AGG - chr8_2:15720017-15720036 Msa1236640:intron 45.0%
!! ATAGTTTGTTTGCGGCCGAT+GGG - chr8_2:15720123-15720142 Msa1236640:intron 45.0%
ACAATCCCCTGACAAATCTG+CGG + chr8_2:15720155-15720174 None:intergenic 45.0%
GGATTGTGATTCCGAATGTG+AGG - chr8_2:15720168-15720187 Msa1236640:intron 45.0%
TGATTCCGAATGTGAGGTTG+AGG - chr8_2:15720174-15720193 Msa1236640:intron 45.0%
GATTCCGAATGTGAGGTTGA+GGG - chr8_2:15720175-15720194 Msa1236640:intron 45.0%
GTGATCTTGATACAAGGAGG+AGG - chr8_2:15720261-15720280 Msa1236640:intron 45.0%
TCTACAAAGAAGGCTGCAAC+CGG - chr8_2:15720443-15720462 Msa1236640:intron 45.0%
GAGTATCCAATGCTTAAGGC+AGG - chr8_2:15720548-15720567 Msa1236640:intron 45.0%
GCAAGGAAACGAACCAAATC+AGG + chr8_2:15720638-15720657 None:intergenic 45.0%
! TTTGGTTCGTTTCCTTGCTG+CGG - chr8_2:15720640-15720659 Msa1236640:CDS 45.0%
! TTCAGACTCTGGGAGCTTAA+AGG + chr8_2:15720804-15720823 None:intergenic 45.0%
TCGAATTTGCATTGAGGGGT+TGG - chr8_2:15720892-15720911 Msa1236640:CDS 45.0%
CGAATTTGCATTGAGGGGTT+GGG - chr8_2:15720893-15720912 Msa1236640:CDS 45.0%
GAATTTGCATTGAGGGGTTG+GGG - chr8_2:15720894-15720913 Msa1236640:CDS 45.0%
!!! TGGTTGAAGGTGGGGTTTTT+TGG + chr8_2:15720947-15720966 None:intergenic 45.0%
TGCATGTAGATTGGTGGGAT+GGG + chr8_2:15721151-15721170 None:intergenic 45.0%
! GCGCTTCTTTTCCAAGAATC+AGG + chr8_2:15721196-15721215 None:intergenic 45.0%
CACCAAATGAGATCAGCCAA+GGG - chr8_2:15721263-15721282 Msa1236640:CDS 45.0%
ACCAAATGAGATCAGCCAAG+GGG - chr8_2:15721264-15721283 Msa1236640:CDS 45.0%
GCATCAAGCACTTCTGATCA+AGG - chr8_2:15721331-15721350 Msa1236640:CDS 45.0%
TGGAGACTCACAAATGAGTC+TGG + chr8_2:15721656-15721675 None:intergenic 45.0%
TTGTGAGTCTCCAGTACTTC+TGG - chr8_2:15721663-15721682 Msa1236640:CDS 45.0%
TTCTGCATCCTGGGGTAAAA+TGG - chr8_2:15721696-15721715 Msa1236640:CDS 45.0%
TTTCTCGGCAAGAACAAGAC+AGG - chr8_2:15721740-15721759 Msa1236640:CDS 45.0%
TTCTCGGCAAGAACAAGACA+GGG - chr8_2:15721741-15721760 Msa1236640:CDS 45.0%
TCTGCAATATCTGGCATGTC+AGG + chr8_2:15721778-15721797 None:intergenic 45.0%
TCCCGGGGATCATTAATATC+TGG + chr8_2:15721868-15721887 None:intergenic 45.0%
!! ATCGTTGACCCTTTTAGCTG+TGG - chr8_2:15722217-15722236 Msa1236640:CDS 45.0%
!! TCGTTGACCCTTTTAGCTGT+GGG - chr8_2:15722218-15722237 Msa1236640:CDS 45.0%
CAGAGAAACAACTATGCAGC+CGG + chr8_2:15722739-15722758 None:intergenic 45.0%
TACGCTCCTCTTCTCATGTT+TGG - chr8_2:15722969-15722988 Msa1236640:CDS 45.0%
TGGGATTGAGCATTACTGTC+TGG - chr8_2:15723091-15723110 Msa1236640:CDS 45.0%
GTATACTCGAAAGTAGGCAG+AGG + chr8_2:15723154-15723173 None:intergenic 45.0%
! GCCAGTGTCGTGATTTTATG+CGG - chr8_2:15723223-15723242 Msa1236640:CDS 45.0%
ACCGCATAAAATCACGACAC+TGG + chr8_2:15723227-15723246 None:intergenic 45.0%
ATGCAGGAAATTGGGGAAAG+GGG + chr8_2:15723352-15723371 None:intergenic 45.0%
AGCGGAAATGCAGGAAATTG+GGG + chr8_2:15723359-15723378 None:intergenic 45.0%
CAAGCGGAAATGCAGGAAAT+TGG + chr8_2:15723361-15723380 None:intergenic 45.0%
CATGCATGCCTTTGAGCAAA+TGG - chr8_2:15723386-15723405 Msa1236640:CDS 45.0%
CCCTAATCGCACATTCACCA+TGG - chr8_2:15719098-15719117 Msa1236640:three_prime_UTR 50.0%
!! GGAAGCATTCGGAGAGGAAT+TGG + chr8_2:15719143-15719162 None:intergenic 50.0%
!! GAGAGTGTGGAGGAAGCATT+CGG + chr8_2:15719154-15719173 None:intergenic 50.0%
! TTGACGGATCTGATCGGAGA+TGG + chr8_2:15719280-15719299 None:intergenic 50.0%
GGTTATCTTCAGCGGACCAA+CGG + chr8_2:15719338-15719357 None:intergenic 50.0%
CCCAATCCTCGATTCCGAAA+AGG - chr8_2:15719356-15719375 Msa1236640:three_prime_UTR 50.0%
TCCGAAGCCCTAGCTATCAT+CGG - chr8_2:15719444-15719463 Msa1236640:three_prime_UTR 50.0%
CGTGATTCCCGATGATAGCT+AGG + chr8_2:15719455-15719474 None:intergenic 50.0%
AGAAGCGAGGGCCATGATTT+GGG + chr8_2:15719483-15719502 None:intergenic 50.0%
AAGAAGCGAGGGCCATGATT+TGG + chr8_2:15719484-15719503 None:intergenic 50.0%
ACAAGTTCCGGAAGAAGCGA+GGG + chr8_2:15719495-15719514 None:intergenic 50.0%
AACAAGTTCCGGAAGAAGCG+AGG + chr8_2:15719496-15719515 None:intergenic 50.0%
! TGCTGATGGTCTTGCTCTTG+TGG - chr8_2:15719905-15719924 Msa1236640:intron 50.0%
TAATTGCCGTAACCGCAAGC+TGG + chr8_2:15720070-15720089 None:intergenic 50.0%
!! CATAGTTTGTTTGCGGCCGA+TGG - chr8_2:15720122-15720141 Msa1236640:intron 50.0%
TCCTCCCTCAACCTCACATT+CGG + chr8_2:15720182-15720201 None:intergenic 50.0%
AAGGGGATTGCTACGCGTTA+TGG - chr8_2:15720302-15720321 Msa1236640:intron 50.0%
CTCCTTTAATGCAAACCCGG+TGG - chr8_2:15720373-15720392 Msa1236640:intron 50.0%
TTGTCCTTCCAATTCGCCAC+CGG + chr8_2:15720392-15720411 None:intergenic 50.0%
AGTGCACCTGCCTTAAGCAT+TGG + chr8_2:15720557-15720576 None:intergenic 50.0%
ATGTAGATTGGTGGGATGGG+TGG + chr8_2:15721148-15721167 None:intergenic 50.0%
CTGCATGTAGATTGGTGGGA+TGG + chr8_2:15721152-15721171 None:intergenic 50.0%
ACTCCAGGCCTTCCTTCAAA+AGG - chr8_2:15721240-15721259 Msa1236640:CDS 50.0%
GCACCAAATGAGATCAGCCA+AGG - chr8_2:15721262-15721281 Msa1236640:CDS 50.0%
TCCCCTTGGCTGATCTCATT+TGG + chr8_2:15721268-15721287 None:intergenic 50.0%
CTTTGGTCAGTCTATCCCCT+TGG + chr8_2:15721282-15721301 None:intergenic 50.0%
TTAGAGAGCTCCAGAGAAGG+CGG - chr8_2:15721437-15721456 Msa1236640:CDS 50.0%
!! GTGCGATTTTGACCCAGTTC+TGG - chr8_2:15721569-15721588 Msa1236640:CDS 50.0%
TGCATCCTGGGGTAAAATGG+TGG - chr8_2:15721699-15721718 Msa1236640:CDS 50.0%
! ACTGTCCACCATTTTACCCC+AGG + chr8_2:15721707-15721726 None:intergenic 50.0%
GCAAGAACAAGACAGGGTTG+AGG - chr8_2:15721747-15721766 Msa1236640:CDS 50.0%
AGAACAAGACAGGGTTGAGG+AGG - chr8_2:15721750-15721769 Msa1236640:CDS 50.0%
TATCTGGAAGGGGGTCTTCT+TGG + chr8_2:15721852-15721871 None:intergenic 50.0%
AGGGAACTGTGCACAAAGCT+GGG + chr8_2:15721911-15721930 None:intergenic 50.0%
! AGCTTTGTGCACAGTTCCCT+GGG - chr8_2:15721911-15721930 Msa1236640:CDS 50.0%
AGCAACGCTGTCTGATTCAC+AGG + chr8_2:15721970-15721989 None:intergenic 50.0%
TGCAGGAAATTGGGGAAAGG+GGG + chr8_2:15723351-15723370 None:intergenic 50.0%
TGCTCAACAAGCGGAAATGC+AGG + chr8_2:15723368-15723387 None:intergenic 50.0%
AGGCATGCATGCTCAACAAG+CGG + chr8_2:15723377-15723396 None:intergenic 50.0%
!! TGTGGAGGAAGCATTCGGAG+AGG + chr8_2:15719149-15719168 None:intergenic 55.0%
!! GAAGTTAGGTTGGGAGGAGG+CGG + chr8_2:15719223-15719242 None:intergenic 55.0%
CGGATCTGATCGGAGATGGA+GGG + chr8_2:15719276-15719295 None:intergenic 55.0%
ACGGATCTGATCGGAGATGG+AGG + chr8_2:15719277-15719296 None:intergenic 55.0%
! AGCGGCTTGACGGATCTGAT+CGG + chr8_2:15719286-15719305 None:intergenic 55.0%
AAAACCACCTCCGTCTCCGT+TGG - chr8_2:15719319-15719338 Msa1236640:three_prime_UTR 55.0%
CCCGATGATAGCTAGGGCTT+CGG + chr8_2:15719448-15719467 None:intergenic 55.0%
CCGAAGCCCTAGCTATCATC+GGG - chr8_2:15719445-15719464 Msa1236640:three_prime_UTR 55.0%
GAAGCGAGGGCCATGATTTG+GGG + chr8_2:15719482-15719501 None:intergenic 55.0%
ATCATGGCCCTCGCTTCTTC+CGG - chr8_2:15719485-15719504 Msa1236640:three_prime_UTR 55.0%
TCAGCACTCCCCTCAAGAGA+AGG + chr8_2:15719891-15719910 None:intergenic 55.0%
!! TCTCTTGAGGGGAGTGCTGA+TGG - chr8_2:15719891-15719910 Msa1236640:intron 55.0%
TGTGGATGAGCTTAGGGCTG+CGG - chr8_2:15719923-15719942 Msa1236640:intron 55.0%
! GACTAGTCGTGACCAGCTTG+CGG - chr8_2:15720055-15720074 Msa1236640:intron 55.0%
TCGTGACCAGCTTGCGGTTA+CGG - chr8_2:15720061-15720080 Msa1236640:intron 55.0%
TCCGAATGTGAGGTTGAGGG+AGG - chr8_2:15720178-15720197 Msa1236640:intron 55.0%
GAGGTTGAGGGAGGATGATG+AGG - chr8_2:15720187-15720206 Msa1236640:intron 55.0%
CGCCACCGGGTTTGCATTAA+AGG + chr8_2:15720378-15720397 None:intergenic 55.0%
ATGCAAACCCGGTGGCGAAT+TGG - chr8_2:15720381-15720400 Msa1236640:intron 55.0%
AAACCCGGTGGCGAATTGGA+AGG - chr8_2:15720385-15720404 Msa1236640:intron 55.0%
TGTCCTTCCAATTCGCCACC+GGG + chr8_2:15720391-15720410 None:intergenic 55.0%
GGTGGCGAATTGGAAGGACA+AGG - chr8_2:15720391-15720410 Msa1236640:intron 55.0%
CAACATTCGACTCCGCAGCA+AGG + chr8_2:15720655-15720674 None:intergenic 55.0%
TAGTAAAGGACGAGGGTGGC+AGG - chr8_2:15720714-15720733 Msa1236640:CDS 55.0%
! CAGTAGCCGGTCTTGTGAAG+CGG - chr8_2:15720981-15721000 Msa1236640:CDS 55.0%
! AGTAGCCGGTCTTGTGAAGC+GGG - chr8_2:15720982-15721001 Msa1236640:CDS 55.0%
!! GTGCCTTTTGAAGGAAGGCC+TGG + chr8_2:15721246-15721265 None:intergenic 55.0%
GCTTTACTGTCCGCCTTCTC+TGG + chr8_2:15721450-15721469 None:intergenic 55.0%
! GCTGCAGGATCCAGAAGTAC+TGG + chr8_2:15721676-15721695 None:intergenic 55.0%
ATCCTGCAGCTTCTGCATCC+TGG - chr8_2:15721686-15721705 Msa1236640:CDS 55.0%
TCCTGCAGCTTCTGCATCCT+GGG - chr8_2:15721687-15721706 Msa1236640:CDS 55.0%
CAGGGAACTGTGCACAAAGC+TGG + chr8_2:15721912-15721931 None:intergenic 55.0%
! CAGCTTTGTGCACAGTTCCC+TGG - chr8_2:15721910-15721929 Msa1236640:CDS 55.0%
TTTGTGCACAGTTCCCTGGG+AGG - chr8_2:15721914-15721933 Msa1236640:CDS 55.0%
TGACTTGAGGGAACCTCCCA+GGG + chr8_2:15721930-15721949 None:intergenic 55.0%
ATGACTTGAGGGAACCTCCC+AGG + chr8_2:15721931-15721950 None:intergenic 55.0%
TCTCAGGATCTGTGCTGGGA+TGG - chr8_2:15723071-15723090 Msa1236640:CDS 55.0%
CTCAGGATCTGTGCTGGGAT+GGG - chr8_2:15723072-15723091 Msa1236640:CDS 55.0%
! GGAGAGGAGAGAGAGTGTGG+AGG + chr8_2:15719164-15719183 None:intergenic 60.0%
CAGGGAGAGGAGAGAGAGTG+TGG + chr8_2:15719167-15719186 None:intergenic 60.0%
AGAGAGAGGATTCGGCGTGG+CGG + chr8_2:15719197-15719216 None:intergenic 60.0%
AGGAGAGAGAGGATTCGGCG+TGG + chr8_2:15719200-15719219 None:intergenic 60.0%
GGCGGAGGAGAGAGAGGATT+CGG + chr8_2:15719205-15719224 None:intergenic 60.0%
!! GGCGAAGTTAGGTTGGGAGG+AGG + chr8_2:15719226-15719245 None:intergenic 60.0%
!! GAGGGCGAAGTTAGGTTGGG+AGG + chr8_2:15719229-15719248 None:intergenic 60.0%
GGCGAGGGCGAAGTTAGGTT+GGG + chr8_2:15719232-15719251 None:intergenic 60.0%
TTCAGCGACGAGACGGAGGA+CGG + chr8_2:15719253-15719272 None:intergenic 60.0%
TGGAGGGTTCAGCGACGAGA+CGG + chr8_2:15719260-15719279 None:intergenic 60.0%
AGTTGACGGCAGCGGCTTGA+CGG + chr8_2:15719296-15719315 None:intergenic 60.0%
CTTCAGCGGACCAACGGAGA+CGG + chr8_2:15719332-15719351 None:intergenic 60.0%
!! TTGGTGGCGGAGAGCATGAG+AGG + chr8_2:15719405-15719424 None:intergenic 60.0%
GGGCTTCGGAGAGCTGAGAT+TGG + chr8_2:15719434-15719453 None:intergenic 60.0%
CGCAGCGTCAATCAACGACG+CGG + chr8_2:15719697-15719716 None:intergenic 60.0%
! CGCGTCGTTGATTGACGCTG+CGG - chr8_2:15719695-15719714 Msa1236640:intron 60.0%
!! AGTGTTTCTGGTGGTGGGGG+CGG + chr8_2:15719732-15719751 None:intergenic 60.0%
GAGGGTGGCAGGCTACGTTA+TGG - chr8_2:15720725-15720744 Msa1236640:CDS 60.0%
CGAAGCCCGCTTCACAAGAC+CGG + chr8_2:15720990-15721009 None:intergenic 60.0%
! CGGTCTTGTGAAGCGGGCTT+CGG - chr8_2:15720988-15721007 Msa1236640:CDS 60.0%
! TTGTGAAGCGGGCTTCGGAG+AGG - chr8_2:15720993-15721012 Msa1236640:CDS 60.0%
! TGTGAAGCGGGCTTCGGAGA+GGG - chr8_2:15720994-15721013 Msa1236640:CDS 60.0%
TGGAGTAGACGCACAAGGGC+AGG + chr8_2:15721226-15721245 None:intergenic 60.0%
TGCCCTTGTGCGTCTACTCC+AGG - chr8_2:15721225-15721244 Msa1236640:CDS 60.0%
GGCCTGGAGTAGACGCACAA+GGG + chr8_2:15721230-15721249 None:intergenic 60.0%
AGGCCTGGAGTAGACGCACA+AGG + chr8_2:15721231-15721250 None:intergenic 60.0%
CCTGCAGCTTCTGCATCCTG+GGG - chr8_2:15721688-15721707 Msa1236640:CDS 60.0%
!! GTTAGGTTGGGAGGAGGCGG+AGG + chr8_2:15719220-15719239 None:intergenic 65.0%
CGGCGAGGGCGAAGTTAGGT+TGG + chr8_2:15719233-15719252 None:intergenic 65.0%
AGGACGGCGAGGGCGAAGTT+AGG + chr8_2:15719237-15719256 None:intergenic 65.0%
AGGGTTCAGCGACGAGACGG+AGG + chr8_2:15719257-15719276 None:intergenic 65.0%
CCCCAGGATGCAGAAGCTGC+AGG + chr8_2:15721691-15721710 None:intergenic 65.0%
AGAGGATTCGGCGTGGCGGC+GGG + chr8_2:15719193-15719212 None:intergenic 70.0%
GAGAGGATTCGGCGTGGCGG+CGG + chr8_2:15719194-15719213 None:intergenic 70.0%
GGAGGAGGCGGAGGAGAGAG+AGG + chr8_2:15719211-15719230 None:intergenic 70.0%
GACGAGACGGAGGACGGCGA+GGG + chr8_2:15719247-15719266 None:intergenic 70.0%
CGGACCAACGGAGACGGAGG+TGG + chr8_2:15719326-15719345 None:intergenic 70.0%
CAGCGGACCAACGGAGACGG+AGG + chr8_2:15719329-15719348 None:intergenic 70.0%
TGGCGGCGGGGTTCAGGGAG+AGG + chr8_2:15719180-15719199 None:intergenic 75.0%
GAGGATTCGGCGTGGCGGCG+GGG + chr8_2:15719192-15719211 None:intergenic 75.0%
CGACGAGACGGAGGACGGCG+AGG + chr8_2:15719248-15719267 None:intergenic 75.0%
! CGGCGTGGCGGCGGGGTTCA+GGG + chr8_2:15719185-15719204 None:intergenic 80.0%
! TCGGCGTGGCGGCGGGGTTC+AGG + chr8_2:15719186-15719205 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 15719006 15723622 15719006 ID=Msa1236640;Name=Msa1236640
chr8_2 mRNA 15719006 15723622 15719006 ID=Msa1236640-mRNA-1;Parent=Msa1236640;Name=Msa1236640-mRNA-1;_AED=0.00;_eAED=0.00;_QI=111|1|1|1|0|0.5|2|546|969
chr8_2 exon 15719006 15719551 15719006 ID=Msa1236640-mRNA-1:exon:5906;Parent=Msa1236640-mRNA-1
chr8_2 exon 15720602 15723622 15720602 ID=Msa1236640-mRNA-1:exon:5905;Parent=Msa1236640-mRNA-1
chr8_2 five_prime_UTR 15723512 15723622 15723512 ID=Msa1236640-mRNA-1:five_prime_utr;Parent=Msa1236640-mRNA-1
chr8_2 CDS 15720602 15723511 15720602 ID=Msa1236640-mRNA-1:cds;Parent=Msa1236640-mRNA-1
chr8_2 three_prime_UTR 15719006 15719551 15719006 ID=Msa1236640-mRNA-1:three_prime_utr;Parent=Msa1236640-mRNA-1
Gene Sequence

>Msa1236640

ATGGAATGGAACCAACAAACTCTCCAATTCCTCTCCGAATGCTTCCTCCACACTCTCTCTCCTCTCCCTGAACCCCGCCGCCACGCCGAATCCTCTCTCTCCTCCGCCTCCTCCCAACCTAACTTCGCCCTCGCCGTCCTCCGTCTCGTCGCTGAACCCTCCATCTCCGATCAGATCCGTCAAGCCGCTGCCGTCAACTTCAAAAACCACCTCCGTCTCCGTTGGTCCGCTGAAGATAACCCAATCCTCGATTCCGAAAAGGAACAAATCAAAACCCTAATCGTACCTCTCATGCTCTCCGCCACCAACAAAATCCAATCTCAGCTCTCCGAAGCCCTAGCTATCATCGGGAATCACGATTTCCCCAAATCATGGCCCTCGCTTCTTCCGGAACTTGTTGCTAGTCTTCAAAAAGGTTCTCAGAGTTCCGATTACGCTTCAATCAATGGTATTCTCAGTACCGCGAATTCCATTTTTAAGAAATTTCGTTTTCAGTATAAAACTAATGATTTATTGCTTGATTTGAAGTATTGTTTGGATAATTTTGCTGCTCCTTTGCTTGAGATTTTTCTCAAAACCGCGTCGTTGATTGACGCTGCGGCTGCTGCGCAGCCGCCCCCACCACCAGAAACACTAAAACCCCTTTTCGAGTCACAGAAATTGTGTTGTAGGATATTTTTTTCACTGAATTTTCAAGAGTTGCCTGAGTTTTTTGAGGATCATATGAATGAATGGATGGGTGAGTTTAGGAAGTATTTGACTACTAGTTATCCTTCTCTTGAGGGGAGTGCTGATGGTCTTGCTCTTGTGGATGAGCTTAGGGCTGCGGTTTGTGAGAATATTAATCTTTATATGGAGAAGAATGAGGAGGAGTTTAAGGTTTTTTTGAATGATTTTGCACTTGCTGTGTGGACTTTGTTAGGGAATGTGTCGCAGTCGACTAGTCGTGACCAGCTTGCGGTTACGGCAATTAAGTTTTTGACGACGGTTAGTACGAGTGTTCATCATAGTTTGTTTGCGGCCGATGGGATTATACCGCAGATTTGTCAGGGGATTGTGATTCCGAATGTGAGGTTGAGGGAGGATGATGAGGAGTTGTTTGAGATGAATCATATTGAGTATATTAGGAGGGATATGGAAGGTAGTGATCTTGATACAAGGAGGAGGATTGCTTGTGAGTTGCTTAAGGGGATTGCTACGCGTTATGGAGATGCTGTTAGAAGCATTGTTTCTGCGCAAGTACAGAGTTTGTTAAGCTCCTTTAATGCAAACCCGGTGGCGAATTGGAAGGACAAGGATTGTGCGATATATTTGGTGGTCTCTCTTTCTACAAAGAAGGCTGCAACCGGTTATGTCTCCACAGATCTTGTTGATGTTCAAAGCTTTTTTGAATCTGTGATTGTCCCTGAGTTGCAAAAAGCAGATGTGAATGAGTATCCAATGCTTAAGGCAGGTGCACTCAAGTTCTTTACTATGTTCCGATCTCAAATATCAAAAGAAGTAGCATTGAGGTTTTTACCTGATTTGGTTCGTTTCCTTGCTGCGGAGTCGAATGTTGTTCATTCTTATGCTGCTAGCTGTATTGAGAAACTCTTAATAGTAAAGGACGAGGGTGGCAGGCTACGTTATGGTTCAGCAGATATCGCTCCAGTTTTCTCAATGCTGATGAACAATCTTTTCAGTGCCTTTAAGCTCCCAGAGTCTGAAGAGAATCAGTATGTTATGAAATGTATTATGAGGGTTCTTGGTGTTGCAGATATACAACTTGATGTTGCTCGAATTTGCATTGAGGGGTTGGGGTCAATTCTTTCTGAAGTTTGCAGAAATCCAAAAAACCCCACCTTCAACCATTATCTGTTTGAGTCAGTAGCCGGTCTTGTGAAGCGGGCTTCGGAGAGGGACCCAACTCTTGTGTCTGTTTTTGAAACAAGCCTTTTCCCTCGGCTTGAAATAATACTGTCCAATGATGTAACTGAATTTTTCCCATACGCATTTCAGTTACTTGCTCTGCTTGTTGAGTTAAACAGACCACCCATCCCACCAATCTACATGCAGATATTTGAGATTCTTTTGTCACCTGATTCTTGGAAAAGAAGCGCAAGCGTTCCTGCCCTTGTGCGTCTACTCCAGGCCTTCCTTCAAAAGGCACCAAATGAGATCAGCCAAGGGGATAGACTGACCAAAGTACTTGGCATATTTGACACGCTAATACAAGCATCAAGCACTTCTGATCAAGGATTTTACGTGCTTAACACAGTCATTGAAAGTCTTCAGTATGATGTTCTTACGCCTTATGTTTCTCACATTTGGGCTGCTATTTTTAGAGAGCTCCAGAGAAGGCGGACAGTAAAGCTCCTCAAGTCTCTCTTGATATTCAGTTCACTGTTTCTGGTTAAGCATGGTTCTGCAAATCTAGTTAATACTATGAATGCCGTCCAGCCTGATATATTTAGTGCGATTTTGACCCAGTTCTGGATTCCGAATCTTAAGCTGATTACTGGAACTATAGAGCTCAAACTGACTGCAGTTGCTTCAACCAGACTCATTTGTGAGTCTCCAGTACTTCTGGATCCTGCAGCTTCTGCATCCTGGGGTAAAATGGTGGACAGTATTGTGACACTTCTTTCTCGGCAAGAACAAGACAGGGTTGAGGAGGAGCCTGACATGCCAGATATTGCAGAAAATGTAGGTTATACTGCCACCTTCGTCCAACTTTACAATGCTGGAAGGAACCAAGAAGACCCCCTTCCAGATATTAATGATCCCCGGGAATTTTTTGTTTCTTCATTGGCCCAGCTTTGTGCACAGTTCCCTGGGAGGTTCCCTCAAGTCATCACTGCAAATGTTGATCCTGTGAATCAGACAGCGTTGCTTCAACTTTGCACCACTTACAACCGAGCATTAGTTTGA

Protein sequence

>Msa1236640

MEWNQQTLQFLSECFLHTLSPLPEPRRHAESSLSSASSQPNFALAVLRLVAEPSISDQIRQAAAVNFKNHLRLRWSAEDNPILDSEKEQIKTLIVPLMLSATNKIQSQLSEALAIIGNHDFPKSWPSLLPELVASLQKGSQSSDYASINGILSTANSIFKKFRFQYKTNDLLLDLKYCLDNFAAPLLEIFLKTASLIDAAAAAQPPPPPETLKPLFESQKLCCRIFFSLNFQELPEFFEDHMNEWMGEFRKYLTTSYPSLEGSADGLALVDELRAAVCENINLYMEKNEEEFKVFLNDFALAVWTLLGNVSQSTSRDQLAVTAIKFLTTVSTSVHHSLFAADGIIPQICQGIVIPNVRLREDDEELFEMNHIEYIRRDMEGSDLDTRRRIACELLKGIATRYGDAVRSIVSAQVQSLLSSFNANPVANWKDKDCAIYLVVSLSTKKAATGYVSTDLVDVQSFFESVIVPELQKADVNEYPMLKAGALKFFTMFRSQISKEVALRFLPDLVRFLAAESNVVHSYAASCIEKLLIVKDEGGRLRYGSADIAPVFSMLMNNLFSAFKLPESEENQYVMKCIMRVLGVADIQLDVARICIEGLGSILSEVCRNPKNPTFNHYLFESVAGLVKRASERDPTLVSVFETSLFPRLEIILSNDVTEFFPYAFQLLALLVELNRPPIPPIYMQIFEILLSPDSWKRSASVPALVRLLQAFLQKAPNEISQGDRLTKVLGIFDTLIQASSTSDQGFYVLNTVIESLQYDVLTPYVSHIWAAIFRELQRRRTVKLLKSLLIFSSLFLVKHGSANLVNTMNAVQPDIFSAILTQFWIPNLKLITGTIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRQEQDRVEEEPDMPDIAENVGYTATFVQLYNAGRNQEDPLPDINDPREFFVSSLAQLCAQFPGRFPQVITANVDPVNQTALLQLCTTYNRALV*