Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0692650 | XP_013458668.1 | 85.714 | 63 | 6 | 2 | 147 | 206 | 251 | 313 | 8.52e-24 | 107 |
| Msa0692650 | XP_013458668.1 | 88.462 | 130 | 9 | 3 | 4 | 130 | 19 | 145 | 3.64e-66 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0692650 | G7ZZT9 | 85.714 | 63 | 6 | 2 | 147 | 206 | 251 | 313 | 4.07e-24 | 107 |
| Msa0692650 | G7ZZT9 | 88.462 | 130 | 9 | 3 | 4 | 130 | 19 | 145 | 1.74e-66 | 216 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa0692650 | 0.830848 | 2.330899e-55 | -8.615850e-47 |
| Msa0065650 | Msa0692650 | 0.808778 | 2.620274e-50 | -8.615850e-47 |
| Msa0111080 | Msa0692650 | 0.820241 | 7.611991e-53 | -8.615850e-47 |
| Msa0615340 | Msa0692650 | 0.817145 | 3.837408e-52 | -8.615850e-47 |
| Msa0626850 | Msa0692650 | 0.815792 | 7.709117e-52 | -8.615850e-47 |
| Msa0664970 | Msa0692650 | 0.807035 | 6.152458e-50 | -8.615850e-47 |
| Msa0678220 | Msa0692650 | 0.803170 | 3.960514e-49 | -8.615850e-47 |
| Msa0679550 | Msa0692650 | 0.834731 | 2.530377e-56 | -8.615850e-47 |
| Msa0692650 | Msa0742150 | 0.821621 | 3.663754e-53 | -8.615850e-47 |
| Msa0692650 | Msa0775560 | 0.822611 | 2.159432e-53 | -8.615850e-47 |
| Msa0692650 | Msa0786070 | 0.826693 | 2.357783e-54 | -8.615850e-47 |
| Msa0692650 | Msa0805920 | 0.802321 | 5.931214e-49 | -8.615850e-47 |
| Msa0692650 | Msa0812950 | 0.838441 | 2.870207e-57 | -8.615850e-47 |
| Msa0692650 | Msa0847470 | 0.807253 | 5.531064e-50 | -8.615850e-47 |
| Msa0692650 | Msa0853440 | 0.808431 | 3.107824e-50 | -8.615850e-47 |
| Msa0692650 | Msa0862280 | 0.808181 | 3.513624e-50 | -8.615850e-47 |
| Msa0692650 | Msa0870060 | 0.805587 | 1.242193e-49 | -8.615850e-47 |
| Msa0692650 | Msa0935770 | 0.810526 | 1.103056e-50 | -8.615850e-47 |
| Msa0692650 | Msa0998460 | 0.801301 | 9.606716e-49 | -8.615850e-47 |
| Msa0692650 | Msa1023300 | 0.833407 | 5.428682e-56 | -8.615850e-47 |
| Msa0692650 | Msa1062030 | 0.812127 | 4.956637e-51 | -8.615850e-47 |
| Msa0692650 | Msa1077340 | 0.817812 | 2.716143e-52 | -8.615850e-47 |
| Msa0692650 | Msa1115280 | 0.813540 | 2.430442e-51 | -8.615850e-47 |
| Msa0692650 | Msa1150790 | 0.804190 | 2.433277e-49 | -8.615850e-47 |
| Msa0692650 | Msa1150800 | 0.815238 | 1.024187e-51 | -8.615850e-47 |
| Msa0692650 | Msa1150810 | 0.837676 | 4.517779e-57 | -8.615850e-47 |
| Msa0692650 | Msa1209190 | 0.812619 | 3.870490e-51 | -8.615850e-47 |
| Msa0692650 | Msa1209860 | 0.809775 | 1.601733e-50 | -8.615850e-47 |
| Msa0692650 | Msa1224200 | 0.918532 | 1.386817e-86 | -8.615850e-47 |
| Msa0692650 | Msa1229610 | 0.811948 | 5.422338e-51 | -8.615850e-47 |
| Msa0692650 | Msa1270660 | 0.809088 | 2.248518e-50 | -8.615850e-47 |
| Msa0692650 | Msa1270730 | 0.821442 | 4.029416e-53 | -8.615850e-47 |
| Msa0692650 | Msa1272320 | 0.812211 | 4.752390e-51 | -8.615850e-47 |
| Msa0692650 | Msa1291450 | 0.808827 | 2.557726e-50 | -8.615850e-47 |
| Msa0692650 | Msa1310220 | 0.803818 | 2.907965e-49 | -8.615850e-47 |
| Msa0692650 | Msa1333780 | 0.802598 | 5.199150e-49 | -8.615850e-47 |
| Msa0692650 | Msa1335230 | 0.820902 | 5.365682e-53 | -8.615850e-47 |
| Msa0692650 | Msa1421210 | 0.802947 | 4.404035e-49 | -8.615850e-47 |
| Msa0692650 | Msa1423820 | 0.810541 | 1.095356e-50 | -8.615850e-47 |
| Msa0692650 | Msa1430130 | 0.822320 | 2.522964e-53 | -8.615850e-47 |
| Msa0692650 | Msa1442790 | 0.801341 | 9.424984e-49 | -8.615850e-47 |
| Msa0692650 | Msa1460750 | 0.823027 | 1.728041e-53 | -8.615850e-47 |
| Msa0692650 | Msa1463600 | 0.819464 | 1.145922e-52 | -8.615850e-47 |
| Msa0135410 | Msa0692650 | 0.800272 | 1.557644e-48 | -8.615850e-47 |
| Msa0138020 | Msa0692650 | 0.806697 | 7.251567e-50 | -8.615850e-47 |
| Msa0142280 | Msa0692650 | 0.944764 | 1.070126e-103 | -8.615850e-47 |
| Msa0154920 | Msa0692650 | 0.808083 | 3.686007e-50 | -8.615850e-47 |
| Msa0155340 | Msa0692650 | 0.803573 | 3.267910e-49 | -8.615850e-47 |
| Msa0189610 | Msa0692650 | 0.814171 | 1.764791e-51 | -8.615850e-47 |
| Msa0200850 | Msa0692650 | 0.817472 | 3.239933e-52 | -8.615850e-47 |
| Msa0201530 | Msa0692650 | 0.802656 | 5.059306e-49 | -8.615850e-47 |
| Msa0222980 | Msa0692650 | 0.806351 | 8.581461e-50 | -8.615850e-47 |
| Msa0371950 | Msa0692650 | 0.801388 | 9.218686e-49 | -8.615850e-47 |
| Msa0403490 | Msa0692650 | 0.809187 | 2.141985e-50 | -8.615850e-47 |
| Msa0240270 | Msa0692650 | 0.801762 | 7.725011e-49 | -8.615850e-47 |
| Msa0243480 | Msa0692650 | 0.810699 | 1.012522e-50 | -8.615850e-47 |
| Msa0244140 | Msa0692650 | 0.833545 | 5.016041e-56 | -8.615850e-47 |
| Msa0244190 | Msa0692650 | 0.834332 | 3.186303e-56 | -8.615850e-47 |
| Msa0271550 | Msa0692650 | 0.819420 | 1.172168e-52 | -8.615850e-47 |
| Msa0281930 | Msa0692650 | 0.816997 | 4.143258e-52 | -8.615850e-47 |
| Msa0319290 | Msa0692650 | 0.835132 | 2.005298e-56 | -8.615850e-47 |
| Msa0321080 | Msa0692650 | 0.822379 | 2.445324e-53 | -8.615850e-47 |
| Msa0329430 | Msa0692650 | 0.816789 | 4.613732e-52 | -8.615850e-47 |
| Msa0530650 | Msa0692650 | 0.800464 | 1.424010e-48 | -8.615850e-47 |
| Msa0534410 | Msa0692650 | 0.804280 | 2.330729e-49 | -8.615850e-47 |
| Msa0566350 | Msa0692650 | 0.808935 | 2.425711e-50 | -8.615850e-47 |
| Msa0566750 | Msa0692650 | 0.808211 | 3.462125e-50 | -8.615850e-47 |
| Msa0569780 | Msa0692650 | 0.811084 | 8.354374e-51 | -8.615850e-47 |
| Msa0587030 | Msa0692650 | 0.817621 | 2.999448e-52 | -8.615850e-47 |
| Msa0587190 | Msa0692650 | 0.819505 | 1.121454e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0692650 | MtrunA17_Chr4g0076471 | 88.462 | 130 | 9 | 3 | 4 | 130 | 19 | 145 | 3.35e-70 | 216 |
| Msa0692650 | MtrunA17_Chr4g0076471 | 85.714 | 63 | 6 | 2 | 147 | 206 | 251 | 313 | 7.84e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATCTATCATGGTTATTT+AGG | 0.209565 | 4_4:-61290859 | Msa0692650:CDS |
| CAAGTGTTTGATTACAATTT+CGG | 0.312597 | 4_4:-61292838 | Msa0692650:CDS |
| GTGATCGACCAGATGATTAA+TGG | 0.319312 | 4_4:-61290977 | Msa0692650:CDS |
| CCTAAATAACCATGATAGAT+TGG | 0.346815 | 4_4:+61290859 | None:intergenic |
| TTTGAAGAAGGAAAGTAGAT+TGG | 0.355768 | 4_4:-61292773 | Msa0692650:CDS |
| CAAGCATGGAAGCACTTTCA+TGG | 0.384069 | 4_4:-61292630 | Msa0692650:CDS |
| AATGTAATATTTACTCATCT+TGG | 0.392233 | 4_4:+61290821 | None:intergenic |
| AATAAAACCACAACCACAAC+TGG | 0.394819 | 4_4:+61292876 | None:intergenic |
| AATACCTGATAAAACTTTCA+TGG | 0.410998 | 4_4:+61291206 | None:intergenic |
| TTGGAATTAGTTTGACTTGA+GGG | 0.414606 | 4_4:+61292551 | None:intergenic |
| AAGTGGACCCATTAATCATC+TGG | 0.419370 | 4_4:+61290969 | None:intergenic |
| TGTGGAACTGCTACTGTCTC+TGG | 0.426326 | 4_4:+61290937 | None:intergenic |
| AGAGAAACAGTAGTTGTAGA+AGG | 0.431084 | 4_4:+61292586 | None:intergenic |
| GAAATCTCCAGTTGTGGTTG+TGG | 0.445667 | 4_4:-61292883 | Msa0692650:CDS |
| TGATCGACCAGATGATTAAT+GGG | 0.456946 | 4_4:-61290976 | Msa0692650:CDS |
| GTTTGAGATAAATTTGAAGA+AGG | 0.464932 | 4_4:-61292785 | Msa0692650:CDS |
| CTAAATAACCATGATAGATT+GGG | 0.468991 | 4_4:+61290860 | None:intergenic |
| AGGTGTCACGGCATGTTTCA+AGG | 0.477649 | 4_4:+61292606 | None:intergenic |
| TATAGATGATGTTGTTTATG+TGG | 0.505857 | 4_4:-61292677 | Msa0692650:CDS |
| AATTTCGGAGACGACGATGA+TGG | 0.516786 | 4_4:-61292823 | Msa0692650:CDS |
| AAGGAGTAGTTACATGGAGT+TGG | 0.519333 | 4_4:+61292532 | None:intergenic |
| CGAAATTGTAATCAAACACT+TGG | 0.523720 | 4_4:+61292839 | None:intergenic |
| CTCTACTTGATGAGAAATTG+TGG | 0.527299 | 4_4:+61290919 | None:intergenic |
| ATTGGATTCAATAAGAGAAG+AGG | 0.530259 | 4_4:-61292755 | Msa0692650:CDS |
| CACAATTTCTCATCAAGTAG+AGG | 0.536462 | 4_4:-61290918 | Msa0692650:CDS |
| TGTTTACCGTTACCGTTGAG+AGG | 0.544969 | 4_4:-61291233 | Msa0692650:CDS |
| CCTGATAAAACTTTCATGGC+AGG | 0.549684 | 4_4:+61291210 | None:intergenic |
| TATGTGGCAGTGGGAACAAA+TGG | 0.556548 | 4_4:-61292661 | Msa0692650:CDS |
| TGATGTTGTTTATGTGGCAG+TGG | 0.557388 | 4_4:-61292671 | Msa0692650:CDS |
| GGCAGGCCTCTCAACGGTAA+CGG | 0.567529 | 4_4:+61291227 | None:intergenic |
| TTGGGCATCAAAAGCTTGAG+TGG | 0.587193 | 4_4:+61290878 | None:intergenic |
| GTTGGAATTAGTTTGACTTG+AGG | 0.589120 | 4_4:+61292550 | None:intergenic |
| TGACTTGAGGGAAAACGTGT+AGG | 0.604542 | 4_4:+61292563 | None:intergenic |
| AAATGGTGGAAGTTCAAGCA+TGG | 0.604604 | 4_4:-61292644 | Msa0692650:CDS |
| CTTGAGTGGAACAAAACCAT+GGG | 0.629470 | 4_4:+61290892 | None:intergenic |
| CATCAAGTAGAGGAATCCCA+TGG | 0.636091 | 4_4:-61290908 | Msa0692650:CDS |
| GCTTGAGTGGAACAAAACCA+TGG | 0.639680 | 4_4:+61290891 | None:intergenic |
| GATGTTGTTTATGTGGCAGT+GGG | 0.642705 | 4_4:-61292670 | Msa0692650:CDS |
| TTTCATGGCAGGCCTCTCAA+CGG | 0.643550 | 4_4:+61291221 | None:intergenic |
| AGTAGTTGTAGAAGGTGTCA+CGG | 0.650946 | 4_4:+61292594 | None:intergenic |
| ATTCAATAAGAGAAGAGGAG+TGG | 0.652515 | 4_4:-61292750 | Msa0692650:CDS |
| GTGGCAGTGGGAACAAATGG+TGG | 0.662195 | 4_4:-61292658 | Msa0692650:CDS |
| GATGATGAAATCTCCAGTTG+TGG | 0.697511 | 4_4:-61292889 | Msa0692650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTAATTAATTAATTAA+TGG | - | chr4_4:61292236-61292255 | Msa0692650:intron | 0.0% |
| !! | TTAATTAATTAATTAATTAA+TGG | - | chr4_4:61292236-61292255 | Msa0692650:intron | 0.0% |
| !!! | AATTAATTAATTAATGGATA+TGG | - | chr4_4:61292266-61292285 | Msa0692650:intron | 10.0% |
| !!! | AATTAATTAATTAATGGATA+TGG | - | chr4_4:61292266-61292285 | Msa0692650:intron | 10.0% |
| !! | CAATTAGATAAAGTTAAATT+TGG | + | chr4_4:61291300-61291319 | None:intergenic | 15.0% |
| !!! | TGACAATAATATGTTTTTTT+TGG | - | chr4_4:61291481-61291500 | Msa0692650:intron | 15.0% |
| !!! | AAAACTTATTTTGAATGTTA+TGG | + | chr4_4:61291554-61291573 | None:intergenic | 15.0% |
| !! | ATTATATTCCAATATCATTA+TGG | - | chr4_4:61292111-61292130 | Msa0692650:intron | 15.0% |
| !! | TTATATTCCAATATCATTAT+GGG | - | chr4_4:61292112-61292131 | Msa0692650:intron | 15.0% |
| !!! | ATATTAAGAAATAAGGTATT+AGG | + | chr4_4:61292568-61292587 | None:intergenic | 15.0% |
| !! | TATCAAGATATTAAGAAATA+AGG | + | chr4_4:61292575-61292594 | None:intergenic | 15.0% |
| !! | CAATTAGATAAAGTTAAATT+TGG | + | chr4_4:61291300-61291319 | None:intergenic | 15.0% |
| !!! | TGACAATAATATGTTTTTTT+TGG | - | chr4_4:61291481-61291500 | Msa0692650:intron | 15.0% |
| !!! | AAAACTTATTTTGAATGTTA+TGG | + | chr4_4:61291554-61291573 | None:intergenic | 15.0% |
| !! | ATTATATTCCAATATCATTA+TGG | - | chr4_4:61292111-61292130 | Msa0692650:intron | 15.0% |
| !! | TTATATTCCAATATCATTAT+GGG | - | chr4_4:61292112-61292131 | Msa0692650:intron | 15.0% |
| !!! | ATATTAAGAAATAAGGTATT+AGG | + | chr4_4:61292568-61292587 | None:intergenic | 15.0% |
| !! | TATCAAGATATTAAGAAATA+AGG | + | chr4_4:61292575-61292594 | None:intergenic | 15.0% |
| !!! | TTTTGTTTGAAAATAAGACA+AGG | + | chr4_4:61291238-61291257 | None:intergenic | 20.0% |
| !!! | AATGTTATGGTTATGTTTTT+GGG | + | chr4_4:61291541-61291560 | None:intergenic | 20.0% |
| !! | TTTCATAATCTTAAACAACT+TGG | - | chr4_4:61291583-61291602 | Msa0692650:intron | 20.0% |
| !! | AAACCTTATATATGTATTGA+TGG | - | chr4_4:61291756-61291775 | Msa0692650:intron | 20.0% |
| !! | GAAACTAAATATAAGGAAAT+TGG | - | chr4_4:61291891-61291910 | Msa0692650:intron | 20.0% |
| !! | AGTGATCAAATTAAGTAATA+CGG | - | chr4_4:61292190-61292209 | Msa0692650:intron | 20.0% |
| !!! | CTTTTTAATGTTGGAAATTT+AGG | + | chr4_4:61292707-61292726 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGAAAATAAGACA+AGG | + | chr4_4:61291238-61291257 | None:intergenic | 20.0% |
| !!! | AATGTTATGGTTATGTTTTT+GGG | + | chr4_4:61291541-61291560 | None:intergenic | 20.0% |
| !! | TTTCATAATCTTAAACAACT+TGG | - | chr4_4:61291583-61291602 | Msa0692650:intron | 20.0% |
| !! | AAACCTTATATATGTATTGA+TGG | - | chr4_4:61291756-61291775 | Msa0692650:intron | 20.0% |
| !! | GAAACTAAATATAAGGAAAT+TGG | - | chr4_4:61291891-61291910 | Msa0692650:intron | 20.0% |
| !! | AGTGATCAAATTAAGTAATA+CGG | - | chr4_4:61292190-61292209 | Msa0692650:intron | 20.0% |
| !!! | CTTTTTAATGTTGGAAATTT+AGG | + | chr4_4:61292707-61292726 | None:intergenic | 20.0% |
| ! | CAAGTGTTTGATTACAATTT+CGG | - | chr4_4:61290910-61290929 | Msa0692650:CDS | 25.0% |
| !! | GTTTGAGATAAATTTGAAGA+AGG | - | chr4_4:61290963-61290982 | Msa0692650:CDS | 25.0% |
| !! | TATAGATGATGTTGTTTATG+TGG | - | chr4_4:61291071-61291090 | Msa0692650:intron | 25.0% |
| ! | TATGATGTGCAATTAATAAG+AGG | + | chr4_4:61291340-61291359 | None:intergenic | 25.0% |
| !! | AAAGATTTGATCACATCTTT+TGG | + | chr4_4:61291429-61291448 | None:intergenic | 25.0% |
| !! | GAATGTTATGGTTATGTTTT+TGG | + | chr4_4:61291542-61291561 | None:intergenic | 25.0% |
| ! | GAAGCTATATAGTATGATTT+AGG | + | chr4_4:61291627-61291646 | None:intergenic | 25.0% |
| ! | ACTCCATCAATACATATATA+AGG | + | chr4_4:61291762-61291781 | None:intergenic | 25.0% |
| ! | TTGTAGGGAAACTAAATATA+AGG | - | chr4_4:61291884-61291903 | Msa0692650:intron | 25.0% |
| !! | AATATAAGGAAATTGGTGAT+TGG | - | chr4_4:61291898-61291917 | Msa0692650:intron | 25.0% |
| ! | ATGTTACCTTAGATTAGATT+GGG | + | chr4_4:61291929-61291948 | None:intergenic | 25.0% |
| ! | TATGTTACCTTAGATTAGAT+TGG | + | chr4_4:61291930-61291949 | None:intergenic | 25.0% |
| ! | TGAATATTGAGTAGCAAAAA+AGG | - | chr4_4:61292027-61292046 | Msa0692650:intron | 25.0% |
| ! | GAATATTGAGTAGCAAAAAA+GGG | - | chr4_4:61292028-61292047 | Msa0692650:intron | 25.0% |
| ! | ATATTTGCCCATAATGATAT+TGG | + | chr4_4:61292122-61292141 | None:intergenic | 25.0% |
| ! | TTTATATTGGATGACCATTA+GGG | + | chr4_4:61292342-61292361 | None:intergenic | 25.0% |
| !! | TTTTATATTGGATGACCATT+AGG | + | chr4_4:61292343-61292362 | None:intergenic | 25.0% |
| ! | ATGGTCATCCAATATAAAAT+AGG | - | chr4_4:61292344-61292363 | Msa0692650:intron | 25.0% |
| ! | ATCCAATATAAAATAGGCTA+TGG | - | chr4_4:61292350-61292369 | Msa0692650:intron | 25.0% |
| ! | AATACCTGATAAAACTTTCA+TGG | + | chr4_4:61292545-61292564 | None:intergenic | 25.0% |
| ! | ACAATGAACATGAATATGAA+CGG | + | chr4_4:61292617-61292636 | None:intergenic | 25.0% |
| ! | CTAAATAACCATGATAGATT+GGG | + | chr4_4:61292891-61292910 | None:intergenic | 25.0% |
| ! | CAAGTGTTTGATTACAATTT+CGG | - | chr4_4:61290910-61290929 | Msa0692650:CDS | 25.0% |
| !! | GTTTGAGATAAATTTGAAGA+AGG | - | chr4_4:61290963-61290982 | Msa0692650:CDS | 25.0% |
| !! | TATAGATGATGTTGTTTATG+TGG | - | chr4_4:61291071-61291090 | Msa0692650:intron | 25.0% |
| ! | TATGATGTGCAATTAATAAG+AGG | + | chr4_4:61291340-61291359 | None:intergenic | 25.0% |
| !! | AAAGATTTGATCACATCTTT+TGG | + | chr4_4:61291429-61291448 | None:intergenic | 25.0% |
| !! | GAATGTTATGGTTATGTTTT+TGG | + | chr4_4:61291542-61291561 | None:intergenic | 25.0% |
| ! | GAAGCTATATAGTATGATTT+AGG | + | chr4_4:61291627-61291646 | None:intergenic | 25.0% |
| ! | ACTCCATCAATACATATATA+AGG | + | chr4_4:61291762-61291781 | None:intergenic | 25.0% |
| ! | TTGTAGGGAAACTAAATATA+AGG | - | chr4_4:61291884-61291903 | Msa0692650:intron | 25.0% |
| !! | AATATAAGGAAATTGGTGAT+TGG | - | chr4_4:61291898-61291917 | Msa0692650:intron | 25.0% |
| ! | ATGTTACCTTAGATTAGATT+GGG | + | chr4_4:61291929-61291948 | None:intergenic | 25.0% |
| ! | TATGTTACCTTAGATTAGAT+TGG | + | chr4_4:61291930-61291949 | None:intergenic | 25.0% |
| ! | TGAATATTGAGTAGCAAAAA+AGG | - | chr4_4:61292027-61292046 | Msa0692650:intron | 25.0% |
| ! | GAATATTGAGTAGCAAAAAA+GGG | - | chr4_4:61292028-61292047 | Msa0692650:intron | 25.0% |
| ! | ATATTTGCCCATAATGATAT+TGG | + | chr4_4:61292122-61292141 | None:intergenic | 25.0% |
| ! | TTTATATTGGATGACCATTA+GGG | + | chr4_4:61292342-61292361 | None:intergenic | 25.0% |
| !! | TTTTATATTGGATGACCATT+AGG | + | chr4_4:61292343-61292362 | None:intergenic | 25.0% |
| ! | ATGGTCATCCAATATAAAAT+AGG | - | chr4_4:61292344-61292363 | Msa0692650:intron | 25.0% |
| ! | ATCCAATATAAAATAGGCTA+TGG | - | chr4_4:61292350-61292369 | Msa0692650:intron | 25.0% |
| ! | AATACCTGATAAAACTTTCA+TGG | + | chr4_4:61292545-61292564 | None:intergenic | 25.0% |
| ! | ACAATGAACATGAATATGAA+CGG | + | chr4_4:61292617-61292636 | None:intergenic | 25.0% |
| ! | CTAAATAACCATGATAGATT+GGG | + | chr4_4:61292891-61292910 | None:intergenic | 25.0% |
| CGAAATTGTAATCAAACACT+TGG | + | chr4_4:61290912-61290931 | None:intergenic | 30.0% | |
| TTTGAAGAAGGAAAGTAGAT+TGG | - | chr4_4:61290975-61290994 | Msa0692650:CDS | 30.0% | |
| ATTGGATTCAATAAGAGAAG+AGG | - | chr4_4:61290993-61291012 | Msa0692650:intron | 30.0% | |
| !! | TTGGAATTAGTTTGACTTGA+GGG | + | chr4_4:61291200-61291219 | None:intergenic | 30.0% |
| ! | TTGGTGATTTATGCTTATGT+TGG | + | chr4_4:61291281-61291300 | None:intergenic | 30.0% |
| CATGAATTATTACTACGAGA+AGG | - | chr4_4:61291646-61291665 | Msa0692650:intron | 30.0% | |
| !! | GCTTCATGTATTATTTCTGA+AGG | + | chr4_4:61291697-61291716 | None:intergenic | 30.0% |
| ! | TAATGAAAAGCGTAACATAC+AGG | - | chr4_4:61291804-61291823 | Msa0692650:intron | 30.0% |
| GTAGAAATGATGCTTATTGA+GGG | - | chr4_4:61291832-61291851 | Msa0692650:intron | 30.0% | |
| AGGAATGCAAAATTACATTG+CGG | - | chr4_4:61292053-61292072 | Msa0692650:intron | 30.0% | |
| TTTCCCATTATTCCGTTAAT+GGG | + | chr4_4:61292319-61292338 | None:intergenic | 30.0% | |
| ! | GACCATAGCCTATTTTATAT+TGG | + | chr4_4:61292355-61292374 | None:intergenic | 30.0% |
| CAACAATTATGAATCAACAG+CGG | + | chr4_4:61292652-61292671 | None:intergenic | 30.0% | |
| !! | TCTTGTACGCTTTTTAATGT+TGG | + | chr4_4:61292716-61292735 | None:intergenic | 30.0% |
| CCTAAATAACCATGATAGAT+TGG | + | chr4_4:61292892-61292911 | None:intergenic | 30.0% | |
| CCAATCTATCATGGTTATTT+AGG | - | chr4_4:61292889-61292908 | Msa0692650:CDS | 30.0% | |
| ! | TCATCTTGGTGATAAAAATC+TGG | + | chr4_4:61292916-61292935 | None:intergenic | 30.0% |
| CGAAATTGTAATCAAACACT+TGG | + | chr4_4:61290912-61290931 | None:intergenic | 30.0% | |
| TTTGAAGAAGGAAAGTAGAT+TGG | - | chr4_4:61290975-61290994 | Msa0692650:CDS | 30.0% | |
| ATTGGATTCAATAAGAGAAG+AGG | - | chr4_4:61290993-61291012 | Msa0692650:intron | 30.0% | |
| !! | TTGGAATTAGTTTGACTTGA+GGG | + | chr4_4:61291200-61291219 | None:intergenic | 30.0% |
| ! | TTGGTGATTTATGCTTATGT+TGG | + | chr4_4:61291281-61291300 | None:intergenic | 30.0% |
| CATGAATTATTACTACGAGA+AGG | - | chr4_4:61291646-61291665 | Msa0692650:intron | 30.0% | |
| !! | GCTTCATGTATTATTTCTGA+AGG | + | chr4_4:61291697-61291716 | None:intergenic | 30.0% |
| ! | TAATGAAAAGCGTAACATAC+AGG | - | chr4_4:61291804-61291823 | Msa0692650:intron | 30.0% |
| GTAGAAATGATGCTTATTGA+GGG | - | chr4_4:61291832-61291851 | Msa0692650:intron | 30.0% | |
| AGGAATGCAAAATTACATTG+CGG | - | chr4_4:61292053-61292072 | Msa0692650:intron | 30.0% | |
| TTTCCCATTATTCCGTTAAT+GGG | + | chr4_4:61292319-61292338 | None:intergenic | 30.0% | |
| ! | GACCATAGCCTATTTTATAT+TGG | + | chr4_4:61292355-61292374 | None:intergenic | 30.0% |
| CAACAATTATGAATCAACAG+CGG | + | chr4_4:61292652-61292671 | None:intergenic | 30.0% | |
| !! | TCTTGTACGCTTTTTAATGT+TGG | + | chr4_4:61292716-61292735 | None:intergenic | 30.0% |
| CCTAAATAACCATGATAGAT+TGG | + | chr4_4:61292892-61292911 | None:intergenic | 30.0% | |
| CCAATCTATCATGGTTATTT+AGG | - | chr4_4:61292889-61292908 | Msa0692650:CDS | 30.0% | |
| ! | TCATCTTGGTGATAAAAATC+TGG | + | chr4_4:61292916-61292935 | None:intergenic | 30.0% |
| AATAAAACCACAACCACAAC+TGG | + | chr4_4:61290875-61290894 | None:intergenic | 35.0% | |
| !!! | AGTTGTGGTTGTGGTTTTAT+TGG | - | chr4_4:61290874-61290893 | Msa0692650:CDS | 35.0% |
| !!! | GTTGTGGTTGTGGTTTTATT+GGG | - | chr4_4:61290875-61290894 | Msa0692650:CDS | 35.0% |
| ATTCAATAAGAGAAGAGGAG+TGG | - | chr4_4:61290998-61291017 | Msa0692650:intron | 35.0% | |
| AGAGAAACAGTAGTTGTAGA+AGG | + | chr4_4:61291165-61291184 | None:intergenic | 35.0% | |
| !! | GTTGGAATTAGTTTGACTTG+AGG | + | chr4_4:61291201-61291220 | None:intergenic | 35.0% |
| TAAGACAAGGAGTAGTTACA+TGG | + | chr4_4:61291225-61291244 | None:intergenic | 35.0% | |
| GTGATTTATGCTTATGTTGG+AGG | + | chr4_4:61291278-61291297 | None:intergenic | 35.0% | |
| AAAGCGTAACATACAGGTTA+AGG | - | chr4_4:61291810-61291829 | Msa0692650:intron | 35.0% | |
| GGTAGAAATGATGCTTATTG+AGG | - | chr4_4:61291831-61291850 | Msa0692650:intron | 35.0% | |
| GAACTACCCAATCTAATCTA+AGG | - | chr4_4:61291920-61291939 | Msa0692650:intron | 35.0% | |
| ACATGAGTTGTTTGTAGACA+AGG | + | chr4_4:61291953-61291972 | None:intergenic | 35.0% | |
| ! | GCAATGTAATTTTGCATTCC+TGG | + | chr4_4:61292054-61292073 | None:intergenic | 35.0% |
| ATGACCCATTAACGGAATAA+TGG | - | chr4_4:61292312-61292331 | Msa0692650:intron | 35.0% | |
| TGACCCATTAACGGAATAAT+GGG | - | chr4_4:61292313-61292332 | Msa0692650:intron | 35.0% | |
| GTTTCCCATTATTCCGTTAA+TGG | + | chr4_4:61292320-61292339 | None:intergenic | 35.0% | |
| GAAGAGAACTTGAGTCATAA+AGG | - | chr4_4:61292418-61292437 | Msa0692650:intron | 35.0% | |
| CAAACAAACAAGAACGTTAG+CGG | + | chr4_4:61292477-61292496 | None:intergenic | 35.0% | |
| GTGATGTCAAAATCATGTGA+AGG | - | chr4_4:61292741-61292760 | Msa0692650:CDS | 35.0% | |
| TGATCGACCAGATGATTAAT+GGG | - | chr4_4:61292772-61292791 | Msa0692650:CDS | 35.0% | |
| CTCTACTTGATGAGAAATTG+TGG | + | chr4_4:61292832-61292851 | None:intergenic | 35.0% | |
| CACAATTTCTCATCAAGTAG+AGG | - | chr4_4:61292830-61292849 | Msa0692650:CDS | 35.0% | |
| ! | TTTTGATGCCCAATCTATCA+TGG | - | chr4_4:61292880-61292899 | Msa0692650:CDS | 35.0% |
| AATAAAACCACAACCACAAC+TGG | + | chr4_4:61290875-61290894 | None:intergenic | 35.0% | |
| !!! | AGTTGTGGTTGTGGTTTTAT+TGG | - | chr4_4:61290874-61290893 | Msa0692650:CDS | 35.0% |
| !!! | GTTGTGGTTGTGGTTTTATT+GGG | - | chr4_4:61290875-61290894 | Msa0692650:CDS | 35.0% |
| ATTCAATAAGAGAAGAGGAG+TGG | - | chr4_4:61290998-61291017 | Msa0692650:intron | 35.0% | |
| AGAGAAACAGTAGTTGTAGA+AGG | + | chr4_4:61291165-61291184 | None:intergenic | 35.0% | |
| !! | GTTGGAATTAGTTTGACTTG+AGG | + | chr4_4:61291201-61291220 | None:intergenic | 35.0% |
| TAAGACAAGGAGTAGTTACA+TGG | + | chr4_4:61291225-61291244 | None:intergenic | 35.0% | |
| GTGATTTATGCTTATGTTGG+AGG | + | chr4_4:61291278-61291297 | None:intergenic | 35.0% | |
| AAAGCGTAACATACAGGTTA+AGG | - | chr4_4:61291810-61291829 | Msa0692650:intron | 35.0% | |
| GGTAGAAATGATGCTTATTG+AGG | - | chr4_4:61291831-61291850 | Msa0692650:intron | 35.0% | |
| GAACTACCCAATCTAATCTA+AGG | - | chr4_4:61291920-61291939 | Msa0692650:intron | 35.0% | |
| ACATGAGTTGTTTGTAGACA+AGG | + | chr4_4:61291953-61291972 | None:intergenic | 35.0% | |
| ! | GCAATGTAATTTTGCATTCC+TGG | + | chr4_4:61292054-61292073 | None:intergenic | 35.0% |
| ATGACCCATTAACGGAATAA+TGG | - | chr4_4:61292312-61292331 | Msa0692650:intron | 35.0% | |
| TGACCCATTAACGGAATAAT+GGG | - | chr4_4:61292313-61292332 | Msa0692650:intron | 35.0% | |
| GTTTCCCATTATTCCGTTAA+TGG | + | chr4_4:61292320-61292339 | None:intergenic | 35.0% | |
| GAAGAGAACTTGAGTCATAA+AGG | - | chr4_4:61292418-61292437 | Msa0692650:intron | 35.0% | |
| CAAACAAACAAGAACGTTAG+CGG | + | chr4_4:61292477-61292496 | None:intergenic | 35.0% | |
| GTGATGTCAAAATCATGTGA+AGG | - | chr4_4:61292741-61292760 | Msa0692650:CDS | 35.0% | |
| TGATCGACCAGATGATTAAT+GGG | - | chr4_4:61292772-61292791 | Msa0692650:CDS | 35.0% | |
| CTCTACTTGATGAGAAATTG+TGG | + | chr4_4:61292832-61292851 | None:intergenic | 35.0% | |
| CACAATTTCTCATCAAGTAG+AGG | - | chr4_4:61292830-61292849 | Msa0692650:CDS | 35.0% | |
| ! | TTTTGATGCCCAATCTATCA+TGG | - | chr4_4:61292880-61292899 | Msa0692650:CDS | 35.0% |
| GATGATGAAATCTCCAGTTG+TGG | - | chr4_4:61290859-61290878 | Msa0692650:CDS | 40.0% | |
| ! | TGATGTTGTTTATGTGGCAG+TGG | - | chr4_4:61291077-61291096 | Msa0692650:intron | 40.0% |
| ! | GATGTTGTTTATGTGGCAGT+GGG | - | chr4_4:61291078-61291097 | Msa0692650:intron | 40.0% |
| ! | AAATGGTGGAAGTTCAAGCA+TGG | - | chr4_4:61291104-61291123 | Msa0692650:intron | 40.0% |
| !! | AGTAGTTGTAGAAGGTGTCA+CGG | + | chr4_4:61291157-61291176 | None:intergenic | 40.0% |
| AAGGAGTAGTTACATGGAGT+TGG | + | chr4_4:61291219-61291238 | None:intergenic | 40.0% | |
| AGAAGGTTTCATGAAGCAAG+AGG | - | chr4_4:61291663-61291682 | Msa0692650:intron | 40.0% | |
| AAGCCATTGTGGAACTTGTA+GGG | - | chr4_4:61291869-61291888 | Msa0692650:intron | 40.0% | |
| TTTCCCTACAAGTTCCACAA+TGG | + | chr4_4:61291875-61291894 | None:intergenic | 40.0% | |
| GCAAAATTACATTGCGGACA+TGG | - | chr4_4:61292059-61292078 | Msa0692650:intron | 40.0% | |
| GGATATGGACTCAATATGAG+TGG | - | chr4_4:61292281-61292300 | Msa0692650:intron | 40.0% | |
| ACTCAATATGAGTGGATGTC+TGG | - | chr4_4:61292289-61292308 | Msa0692650:intron | 40.0% | |
| ATGTCTGGATGACCCATTAA+CGG | - | chr4_4:61292304-61292323 | Msa0692650:intron | 40.0% | |
| ! | GGAATAATGGGAAACCCTAA+TGG | - | chr4_4:61292325-61292344 | Msa0692650:intron | 40.0% |
| ACTCAAGTTCTCTTCAGATG+GGG | + | chr4_4:61292413-61292432 | None:intergenic | 40.0% | |
| GACTCAAGTTCTCTTCAGAT+GGG | + | chr4_4:61292414-61292433 | None:intergenic | 40.0% | |
| TGACTCAAGTTCTCTTCAGA+TGG | + | chr4_4:61292415-61292434 | None:intergenic | 40.0% | |
| !! | TGATTTGGTTCTTCCTCAAC+CGG | + | chr4_4:61292450-61292469 | None:intergenic | 40.0% |
| CCTGATAAAACTTTCATGGC+AGG | + | chr4_4:61292541-61292560 | None:intergenic | 40.0% | |
| !! | CCTGCCATGAAAGTTTTATC+AGG | - | chr4_4:61292538-61292557 | Msa0692650:intron | 40.0% |
| GTGATCGACCAGATGATTAA+TGG | - | chr4_4:61292771-61292790 | Msa0692650:CDS | 40.0% | |
| AAGTGGACCCATTAATCATC+TGG | + | chr4_4:61292782-61292801 | None:intergenic | 40.0% | |
| CTTGAGTGGAACAAAACCAT+GGG | + | chr4_4:61292859-61292878 | None:intergenic | 40.0% | |
| GATGATGAAATCTCCAGTTG+TGG | - | chr4_4:61290859-61290878 | Msa0692650:CDS | 40.0% | |
| ! | TGATGTTGTTTATGTGGCAG+TGG | - | chr4_4:61291077-61291096 | Msa0692650:intron | 40.0% |
| ! | GATGTTGTTTATGTGGCAGT+GGG | - | chr4_4:61291078-61291097 | Msa0692650:intron | 40.0% |
| ! | AAATGGTGGAAGTTCAAGCA+TGG | - | chr4_4:61291104-61291123 | Msa0692650:intron | 40.0% |
| !! | AGTAGTTGTAGAAGGTGTCA+CGG | + | chr4_4:61291157-61291176 | None:intergenic | 40.0% |
| AAGGAGTAGTTACATGGAGT+TGG | + | chr4_4:61291219-61291238 | None:intergenic | 40.0% | |
| AGAAGGTTTCATGAAGCAAG+AGG | - | chr4_4:61291663-61291682 | Msa0692650:intron | 40.0% | |
| AAGCCATTGTGGAACTTGTA+GGG | - | chr4_4:61291869-61291888 | Msa0692650:intron | 40.0% | |
| TTTCCCTACAAGTTCCACAA+TGG | + | chr4_4:61291875-61291894 | None:intergenic | 40.0% | |
| GCAAAATTACATTGCGGACA+TGG | - | chr4_4:61292059-61292078 | Msa0692650:intron | 40.0% | |
| GGATATGGACTCAATATGAG+TGG | - | chr4_4:61292281-61292300 | Msa0692650:intron | 40.0% | |
| ACTCAATATGAGTGGATGTC+TGG | - | chr4_4:61292289-61292308 | Msa0692650:intron | 40.0% | |
| ATGTCTGGATGACCCATTAA+CGG | - | chr4_4:61292304-61292323 | Msa0692650:intron | 40.0% | |
| ! | GGAATAATGGGAAACCCTAA+TGG | - | chr4_4:61292325-61292344 | Msa0692650:intron | 40.0% |
| ACTCAAGTTCTCTTCAGATG+GGG | + | chr4_4:61292413-61292432 | None:intergenic | 40.0% | |
| GACTCAAGTTCTCTTCAGAT+GGG | + | chr4_4:61292414-61292433 | None:intergenic | 40.0% | |
| TGACTCAAGTTCTCTTCAGA+TGG | + | chr4_4:61292415-61292434 | None:intergenic | 40.0% | |
| !! | TGATTTGGTTCTTCCTCAAC+CGG | + | chr4_4:61292450-61292469 | None:intergenic | 40.0% |
| CCTGATAAAACTTTCATGGC+AGG | + | chr4_4:61292541-61292560 | None:intergenic | 40.0% | |
| !! | CCTGCCATGAAAGTTTTATC+AGG | - | chr4_4:61292538-61292557 | Msa0692650:intron | 40.0% |
| GTGATCGACCAGATGATTAA+TGG | - | chr4_4:61292771-61292790 | Msa0692650:CDS | 40.0% | |
| AAGTGGACCCATTAATCATC+TGG | + | chr4_4:61292782-61292801 | None:intergenic | 40.0% | |
| CTTGAGTGGAACAAAACCAT+GGG | + | chr4_4:61292859-61292878 | None:intergenic | 40.0% | |
| GAAATCTCCAGTTGTGGTTG+TGG | - | chr4_4:61290865-61290884 | Msa0692650:CDS | 45.0% | |
| AATTTCGGAGACGACGATGA+TGG | - | chr4_4:61290925-61290944 | Msa0692650:CDS | 45.0% | |
| TATGTGGCAGTGGGAACAAA+TGG | - | chr4_4:61291087-61291106 | Msa0692650:intron | 45.0% | |
| !! | CAAGCATGGAAGCACTTTCA+TGG | - | chr4_4:61291118-61291137 | Msa0692650:intron | 45.0% |
| TGACTTGAGGGAAAACGTGT+AGG | + | chr4_4:61291188-61291207 | None:intergenic | 45.0% | |
| GAAGCCATTGTGGAACTTGT+AGG | - | chr4_4:61291868-61291887 | Msa0692650:intron | 45.0% | |
| TTGAGTAGCAAAAAAGGGCC+AGG | - | chr4_4:61292033-61292052 | Msa0692650:intron | 45.0% | |
| ! | GCGGACATGGTGTTAAATGT+TGG | - | chr4_4:61292072-61292091 | Msa0692650:intron | 45.0% |
| TTCGCCGTGTACGGTATATT+GGG | + | chr4_4:61292378-61292397 | None:intergenic | 45.0% | |
| CTCAAGTTCTCTTCAGATGG+GGG | + | chr4_4:61292412-61292431 | None:intergenic | 45.0% | |
| ACAAACAAGAACGTTAGCGG+CGG | + | chr4_4:61292474-61292493 | None:intergenic | 45.0% | |
| TGTTTACCGTTACCGTTGAG+AGG | - | chr4_4:61292515-61292534 | Msa0692650:intron | 45.0% | |
| !!! | GTCTCTGGTGTGTTTTGAAG+TGG | + | chr4_4:61292799-61292818 | None:intergenic | 45.0% |
| CATCAAGTAGAGGAATCCCA+TGG | - | chr4_4:61292840-61292859 | Msa0692650:CDS | 45.0% | |
| GCTTGAGTGGAACAAAACCA+TGG | + | chr4_4:61292860-61292879 | None:intergenic | 45.0% | |
| TTGGGCATCAAAAGCTTGAG+TGG | + | chr4_4:61292873-61292892 | None:intergenic | 45.0% | |
| GAAATCTCCAGTTGTGGTTG+TGG | - | chr4_4:61290865-61290884 | Msa0692650:CDS | 45.0% | |
| AATTTCGGAGACGACGATGA+TGG | - | chr4_4:61290925-61290944 | Msa0692650:CDS | 45.0% | |
| TATGTGGCAGTGGGAACAAA+TGG | - | chr4_4:61291087-61291106 | Msa0692650:intron | 45.0% | |
| !! | CAAGCATGGAAGCACTTTCA+TGG | - | chr4_4:61291118-61291137 | Msa0692650:intron | 45.0% |
| TGACTTGAGGGAAAACGTGT+AGG | + | chr4_4:61291188-61291207 | None:intergenic | 45.0% | |
| GAAGCCATTGTGGAACTTGT+AGG | - | chr4_4:61291868-61291887 | Msa0692650:intron | 45.0% | |
| TTGAGTAGCAAAAAAGGGCC+AGG | - | chr4_4:61292033-61292052 | Msa0692650:intron | 45.0% | |
| ! | GCGGACATGGTGTTAAATGT+TGG | - | chr4_4:61292072-61292091 | Msa0692650:intron | 45.0% |
| TTCGCCGTGTACGGTATATT+GGG | + | chr4_4:61292378-61292397 | None:intergenic | 45.0% | |
| CTCAAGTTCTCTTCAGATGG+GGG | + | chr4_4:61292412-61292431 | None:intergenic | 45.0% | |
| ACAAACAAGAACGTTAGCGG+CGG | + | chr4_4:61292474-61292493 | None:intergenic | 45.0% | |
| TGTTTACCGTTACCGTTGAG+AGG | - | chr4_4:61292515-61292534 | Msa0692650:intron | 45.0% | |
| !!! | GTCTCTGGTGTGTTTTGAAG+TGG | + | chr4_4:61292799-61292818 | None:intergenic | 45.0% |
| CATCAAGTAGAGGAATCCCA+TGG | - | chr4_4:61292840-61292859 | Msa0692650:CDS | 45.0% | |
| GCTTGAGTGGAACAAAACCA+TGG | + | chr4_4:61292860-61292879 | None:intergenic | 45.0% | |
| TTGGGCATCAAAAGCTTGAG+TGG | + | chr4_4:61292873-61292892 | None:intergenic | 45.0% | |
| ! | AGGTGTCACGGCATGTTTCA+AGG | + | chr4_4:61291145-61291164 | None:intergenic | 50.0% |
| CAACGTTGCTGAAGCCATTG+TGG | - | chr4_4:61291858-61291877 | Msa0692650:intron | 50.0% | |
| GGTCCCCAATATACCGTACA+CGG | - | chr4_4:61292371-61292390 | Msa0692650:intron | 50.0% | |
| TCGCCGTGTACGGTATATTG+GGG | + | chr4_4:61292377-61292396 | None:intergenic | 50.0% | |
| GTTCGCCGTGTACGGTATAT+TGG | + | chr4_4:61292379-61292398 | None:intergenic | 50.0% | |
| AAGAGAGAGTTCGCCGTGTA+CGG | + | chr4_4:61292387-61292406 | None:intergenic | 50.0% | |
| !! | TGAGTCATAAAGGCACCGAC+CGG | - | chr4_4:61292428-61292447 | Msa0692650:intron | 50.0% |
| ! | TTGGTTCTTCCTCAACCGGT+CGG | + | chr4_4:61292446-61292465 | None:intergenic | 50.0% |
| TTTCATGGCAGGCCTCTCAA+CGG | + | chr4_4:61292530-61292549 | None:intergenic | 50.0% | |
| TGTGGAACTGCTACTGTCTC+TGG | + | chr4_4:61292814-61292833 | None:intergenic | 50.0% | |
| ! | AGGTGTCACGGCATGTTTCA+AGG | + | chr4_4:61291145-61291164 | None:intergenic | 50.0% |
| CAACGTTGCTGAAGCCATTG+TGG | - | chr4_4:61291858-61291877 | Msa0692650:intron | 50.0% | |
| GGTCCCCAATATACCGTACA+CGG | - | chr4_4:61292371-61292390 | Msa0692650:intron | 50.0% | |
| TCGCCGTGTACGGTATATTG+GGG | + | chr4_4:61292377-61292396 | None:intergenic | 50.0% | |
| GTTCGCCGTGTACGGTATAT+TGG | + | chr4_4:61292379-61292398 | None:intergenic | 50.0% | |
| AAGAGAGAGTTCGCCGTGTA+CGG | + | chr4_4:61292387-61292406 | None:intergenic | 50.0% | |
| !! | TGAGTCATAAAGGCACCGAC+CGG | - | chr4_4:61292428-61292447 | Msa0692650:intron | 50.0% |
| ! | TTGGTTCTTCCTCAACCGGT+CGG | + | chr4_4:61292446-61292465 | None:intergenic | 50.0% |
| TTTCATGGCAGGCCTCTCAA+CGG | + | chr4_4:61292530-61292549 | None:intergenic | 50.0% | |
| TGTGGAACTGCTACTGTCTC+TGG | + | chr4_4:61292814-61292833 | None:intergenic | 50.0% | |
| GTGGCAGTGGGAACAAATGG+TGG | - | chr4_4:61291090-61291109 | Msa0692650:intron | 55.0% | |
| !! | ATAAAGGCACCGACCGGTTG+AGG | - | chr4_4:61292434-61292453 | Msa0692650:intron | 55.0% |
| AACGTTAGCGGCGGCTGATT+TGG | + | chr4_4:61292465-61292484 | None:intergenic | 55.0% | |
| GTGGCAGTGGGAACAAATGG+TGG | - | chr4_4:61291090-61291109 | Msa0692650:intron | 55.0% | |
| !! | ATAAAGGCACCGACCGGTTG+AGG | - | chr4_4:61292434-61292453 | Msa0692650:intron | 55.0% |
| AACGTTAGCGGCGGCTGATT+TGG | + | chr4_4:61292465-61292484 | None:intergenic | 55.0% | |
| GGCAGGCCTCTCAACGGTAA+CGG | + | chr4_4:61292524-61292543 | None:intergenic | 60.0% | |
| GGCAGGCCTCTCAACGGTAA+CGG | + | chr4_4:61292524-61292543 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 61290835 | 61292935 | 61290835 | ID=Msa0692650;Name=Msa0692650 |
| chr4_4 | mRNA | 61290835 | 61292935 | 61290835 | ID=Msa0692650-mRNA-1;Parent=Msa0692650;Name=Msa0692650-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|0.66|1|1|3|0|206 |
| chr4_4 | exon | 61292545 | 61292935 | 61292545 | ID=Msa0692650-mRNA-1:exon:16926;Parent=Msa0692650-mRNA-1 |
| chr4_4 | exon | 61291211 | 61291267 | 61291211 | ID=Msa0692650-mRNA-1:exon:16925;Parent=Msa0692650-mRNA-1 |
| chr4_4 | exon | 61290835 | 61291007 | 61290835 | ID=Msa0692650-mRNA-1:exon:16924;Parent=Msa0692650-mRNA-1 |
| chr4_4 | CDS | 61292545 | 61292935 | 61292545 | ID=Msa0692650-mRNA-1:cds;Parent=Msa0692650-mRNA-1 |
| chr4_4 | CDS | 61291211 | 61291267 | 61291211 | ID=Msa0692650-mRNA-1:cds;Parent=Msa0692650-mRNA-1 |
| chr4_4 | CDS | 61290835 | 61291007 | 61290835 | ID=Msa0692650-mRNA-1:cds;Parent=Msa0692650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
