Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108070 | XP_003589717.2 | 94.340 | 477 | 27 | 0 | 1 | 477 | 1 | 477 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108070 | sp|Q9FMX6|DJC76_ARATH | 52.093 | 430 | 192 | 5 | 53 | 475 | 37 | 459 | 2.69e-154 | 449 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108070 | A0A396JQ54 | 94.340 | 477 | 27 | 0 | 1 | 477 | 1 | 477 | 0.0 | 934 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000780 | Msa0108070 | 0.800581 | 1.347672e-48 | -8.615850e-47 |
| Msa0004340 | Msa0108070 | 0.802416 | 5.668681e-49 | -8.615850e-47 |
| Msa0006050 | Msa0108070 | 0.810526 | 1.103248e-50 | -8.615850e-47 |
| Msa0012380 | Msa0108070 | 0.815414 | 9.358257e-52 | -8.615850e-47 |
| Msa0014410 | Msa0108070 | 0.914026 | 3.103614e-84 | -8.615850e-47 |
| Msa0020320 | Msa0108070 | 0.817684 | 2.903037e-52 | -8.615850e-47 |
| Msa0020630 | Msa0108070 | 0.807211 | 5.645865e-50 | -8.615850e-47 |
| Msa0026930 | Msa0108070 | 0.803330 | 3.669621e-49 | -8.615850e-47 |
| Msa0040550 | Msa0108070 | -0.836758 | 7.754439e-57 | -8.615850e-47 |
| Msa0044180 | Msa0108070 | 0.839269 | 1.753325e-57 | -8.615850e-47 |
| Msa0064550 | Msa0108070 | 0.899095 | 2.780867e-77 | -8.615850e-47 |
| Msa0072860 | Msa0108070 | 0.801641 | 8.180314e-49 | -8.615850e-47 |
| Msa0101170 | Msa0108070 | -0.813123 | 3.000991e-51 | -8.615850e-47 |
| Msa0103160 | Msa0108070 | 0.817519 | 3.161768e-52 | -8.615850e-47 |
| Msa0104360 | Msa0108070 | 0.831863 | 1.311656e-55 | -8.615850e-47 |
| Msa0108070 | Msa0109490 | 0.899217 | 2.466172e-77 | -8.615850e-47 |
| Msa0108070 | Msa0114700 | 0.815587 | 8.565137e-52 | -8.615850e-47 |
| Msa0108070 | Msa0116510 | 0.802744 | 4.850681e-49 | -8.615850e-47 |
| Msa0108070 | Msa0143280 | 0.822399 | 2.419347e-53 | -8.615850e-47 |
| Msa0108070 | Msa0154200 | 0.816200 | 6.249857e-52 | -8.615850e-47 |
| Msa0108070 | Msa0154220 | 0.837683 | 4.497341e-57 | -8.615850e-47 |
| Msa0108070 | Msa0154240 | 0.888104 | 7.933627e-73 | -8.615850e-47 |
| Msa0108070 | Msa0154270 | 0.930420 | 1.680665e-93 | -8.615850e-47 |
| Msa0108070 | Msa0155610 | 0.835334 | 1.782989e-56 | -8.615850e-47 |
| Msa0108070 | Msa0159750 | 0.804859 | 1.764530e-49 | -8.615850e-47 |
| Msa0108070 | Msa0171920 | 0.811686 | 6.183434e-51 | -8.615850e-47 |
| Msa0108070 | Msa0178350 | 0.802995 | 4.306301e-49 | -8.615850e-47 |
| Msa0108070 | Msa0183560 | 0.826800 | 2.223666e-54 | -8.615850e-47 |
| Msa0108070 | Msa0185640 | -0.814735 | 1.323961e-51 | -8.615850e-47 |
| Msa0108070 | Msa0187980 | 0.812228 | 4.712080e-51 | -8.615850e-47 |
| Msa0108070 | Msa0197030 | 0.866199 | 3.393845e-65 | -8.615850e-47 |
| Msa0108070 | Msa0198440 | 0.831188 | 1.923198e-55 | -8.615850e-47 |
| Msa0108070 | Msa0199740 | 0.820521 | 6.564104e-53 | -8.615850e-47 |
| Msa0108070 | Msa0202740 | 0.814198 | 1.741058e-51 | -8.615850e-47 |
| Msa0108070 | Msa0224370 | 0.835878 | 1.298273e-56 | -8.615850e-47 |
| Msa0108070 | Msa0224400 | 0.827211 | 1.773693e-54 | -8.615850e-47 |
| Msa0108070 | Msa0225880 | 0.831822 | 1.342333e-55 | -8.615850e-47 |
| Msa0108070 | Msa0238860 | 0.845861 | 3.118767e-59 | -8.615850e-47 |
| Msa0108070 | Msa0245870 | 0.845657 | 3.542960e-59 | -8.615850e-47 |
| Msa0108070 | Msa0253160 | 0.818408 | 1.990632e-52 | -8.615850e-47 |
| Msa0108070 | Msa0258220 | -0.809427 | 1.902025e-50 | -8.615850e-47 |
| Msa0108070 | Msa0258700 | -0.808144 | 3.577963e-50 | -8.615850e-47 |
| Msa0108070 | Msa0260190 | 0.850021 | 2.222996e-60 | -8.615850e-47 |
| Msa0108070 | Msa0260470 | 0.835158 | 1.974978e-56 | -8.615850e-47 |
| Msa0108070 | Msa0264940 | -0.802684 | 4.991994e-49 | -8.615850e-47 |
| Msa0108070 | Msa0265580 | 0.825780 | 3.889667e-54 | -8.615850e-47 |
| Msa0108070 | Msa0265980 | -0.840655 | 7.631056e-58 | -8.615850e-47 |
| Msa0108070 | Msa0276590 | 0.857247 | 1.858757e-62 | -8.615850e-47 |
| Msa0108070 | Msa0278670 | 0.831475 | 1.635003e-55 | -8.615850e-47 |
| Msa0108070 | Msa0295570 | 0.818616 | 1.786565e-52 | -8.615850e-47 |
| Msa0108070 | Msa0302990 | -0.805473 | 1.312588e-49 | -8.615850e-47 |
| Msa0108070 | Msa0303440 | 0.832658 | 8.337526e-56 | -8.615850e-47 |
| Msa0108070 | Msa0303500 | 0.823748 | 1.172018e-53 | -8.615850e-47 |
| Msa0108070 | Msa0304110 | 0.835253 | 1.868767e-56 | -8.615850e-47 |
| Msa0108070 | Msa0308570 | 0.879921 | 8.397072e-70 | -8.615850e-47 |
| Msa0108070 | Msa0316610 | 0.828705 | 7.747355e-55 | -8.615850e-47 |
| Msa0108070 | Msa0318070 | 0.831010 | 2.126343e-55 | -8.615850e-47 |
| Msa0108070 | Msa0341190 | 0.835617 | 1.511980e-56 | -8.615850e-47 |
| Msa0108070 | Msa0343370 | 0.815974 | 7.022272e-52 | -8.615850e-47 |
| Msa0108070 | Msa0344680 | 0.903483 | 3.311945e-79 | -8.615850e-47 |
| Msa0108070 | Msa0346790 | 0.800919 | 1.149614e-48 | -8.615850e-47 |
| Msa0108070 | Msa0354390 | 0.829055 | 6.376270e-55 | -8.615850e-47 |
| Msa0108070 | Msa0366870 | 0.801028 | 1.092227e-48 | -8.615850e-47 |
| Msa0108070 | Msa0377280 | 0.858261 | 9.299229e-63 | -8.615850e-47 |
| Msa0108070 | Msa0379340 | -0.813629 | 2.323114e-51 | -8.615850e-47 |
| Msa0108070 | Msa0382590 | 0.850716 | 1.418153e-60 | -8.615850e-47 |
| Msa0108070 | Msa0384530 | 0.820571 | 6.393849e-53 | -8.615850e-47 |
| Msa0108070 | Msa0387970 | 0.872691 | 2.617494e-67 | -8.615850e-47 |
| Msa0108070 | Msa0389060 | 0.853015 | 3.159617e-61 | -8.615850e-47 |
| Msa0108070 | Msa0392050 | 0.905286 | 5.036839e-80 | -8.615850e-47 |
| Msa0108070 | Msa0392540 | 0.816752 | 4.703295e-52 | -8.615850e-47 |
| Msa0108070 | Msa0401340 | 0.852727 | 3.819340e-61 | -8.615850e-47 |
| Msa0108070 | Msa0404690 | 0.868209 | 7.740777e-66 | -8.615850e-47 |
| Msa0108070 | Msa0412190 | 0.834559 | 2.794452e-56 | -8.615850e-47 |
| Msa0108070 | Msa0428850 | -0.823332 | 1.466400e-53 | -8.615850e-47 |
| Msa0108070 | Msa0432720 | 0.841252 | 5.318926e-58 | -8.615850e-47 |
| Msa0108070 | Msa0435010 | 0.837106 | 6.321471e-57 | -8.615850e-47 |
| Msa0108070 | Msa0440310 | 0.824837 | 6.501381e-54 | -8.615850e-47 |
| Msa0108070 | Msa0448120 | 0.876315 | 1.539761e-68 | -8.615850e-47 |
| Msa0108070 | Msa0462590 | 0.831765 | 1.386570e-55 | -8.615850e-47 |
| Msa0108070 | Msa0465800 | 0.801608 | 8.308437e-49 | -8.615850e-47 |
| Msa0108070 | Msa0469950 | 0.905457 | 4.207279e-80 | -8.615850e-47 |
| Msa0108070 | Msa0479030 | 0.820466 | 6.759685e-53 | -8.615850e-47 |
| Msa0108070 | Msa0479100 | 0.820095 | 8.218863e-53 | -8.615850e-47 |
| Msa0108070 | Msa0481490 | 0.805233 | 1.473770e-49 | -8.615850e-47 |
| Msa0108070 | Msa0487490 | 0.838878 | 2.213615e-57 | -8.615850e-47 |
| Msa0108070 | Msa0525270 | 0.863370 | 2.612647e-64 | -8.615850e-47 |
| Msa0108070 | Msa0525280 | 0.869299 | 3.436692e-66 | -8.615850e-47 |
| Msa0108070 | Msa0530340 | 0.887746 | 1.088223e-72 | -8.615850e-47 |
| Msa0108070 | Msa0530950 | 0.847159 | 1.379757e-59 | -8.615850e-47 |
| Msa0108070 | Msa0545230 | 0.865944 | 4.088670e-65 | -8.615850e-47 |
| Msa0108070 | Msa0546080 | 0.822300 | 2.550563e-53 | -8.615850e-47 |
| Msa0108070 | Msa0548210 | 0.847239 | 1.311661e-59 | -8.615850e-47 |
| Msa0108070 | Msa0549540 | 0.892059 | 2.249597e-74 | -8.615850e-47 |
| Msa0108070 | Msa0556070 | 0.853591 | 2.159307e-61 | -8.615850e-47 |
| Msa0108070 | Msa0569230 | 0.841547 | 4.447188e-58 | -8.615850e-47 |
| Msa0108070 | Msa0569360 | 0.813732 | 2.204954e-51 | -8.615850e-47 |
| Msa0108070 | Msa0569930 | 0.816062 | 6.710974e-52 | -8.615850e-47 |
| Msa0108070 | Msa0570680 | 0.837186 | 6.031205e-57 | -8.615850e-47 |
| Msa0108070 | Msa0583740 | 0.820304 | 7.361324e-53 | -8.615850e-47 |
| Msa0108070 | Msa0584280 | 0.854830 | 9.474257e-62 | -8.615850e-47 |
| Msa0108070 | Msa0589640 | 0.806002 | 1.016084e-49 | -8.615850e-47 |
| Msa0108070 | Msa0600820 | 0.869674 | 2.593386e-66 | -8.615850e-47 |
| Msa0108070 | Msa0604880 | 0.889025 | 3.502154e-73 | -8.615850e-47 |
| Msa0108070 | Msa0605250 | 0.877792 | 4.728944e-69 | -8.615850e-47 |
| Msa0108070 | Msa0610780 | 0.840266 | 9.641782e-58 | -8.615850e-47 |
| Msa0108070 | Msa0610810 | 0.831436 | 1.670735e-55 | -8.615850e-47 |
| Msa0108070 | Msa0618520 | 0.801270 | 9.747528e-49 | -8.615850e-47 |
| Msa0108070 | Msa0622250 | 0.864551 | 1.121025e-64 | -8.615850e-47 |
| Msa0108070 | Msa0627050 | 0.873387 | 1.529321e-67 | -8.615850e-47 |
| Msa0108070 | Msa0628100 | 0.820106 | 8.170812e-53 | -8.615850e-47 |
| Msa0108070 | Msa0633720 | 0.817102 | 3.924389e-52 | -8.615850e-47 |
| Msa0108070 | Msa0646190 | 0.868009 | 8.973829e-66 | -8.615850e-47 |
| Msa0108070 | Msa0646340 | 0.864310 | 1.333078e-64 | -8.615850e-47 |
| Msa0108070 | Msa0649310 | 0.823782 | 1.150496e-53 | -8.615850e-47 |
| Msa0108070 | Msa0651310 | 0.838236 | 3.242193e-57 | -8.615850e-47 |
| Msa0108070 | Msa0651400 | 0.807301 | 5.405385e-50 | -8.615850e-47 |
| Msa0108070 | Msa0659300 | -0.830112 | 3.526932e-55 | -8.615850e-47 |
| Msa0108070 | Msa0675010 | 0.841801 | 3.811287e-58 | -8.615850e-47 |
| Msa0108070 | Msa0676100 | 0.817507 | 3.181925e-52 | -8.615850e-47 |
| Msa0108070 | Msa0679780 | 0.855348 | 6.701900e-62 | -8.615850e-47 |
| Msa0108070 | Msa0681210 | 0.817236 | 3.660947e-52 | -8.615850e-47 |
| Msa0108070 | Msa0685890 | 0.840808 | 6.958204e-58 | -8.615850e-47 |
| Msa0108070 | Msa0688110 | 0.823866 | 1.099814e-53 | -8.615850e-47 |
| Msa0108070 | Msa0693400 | 0.858746 | 6.665783e-63 | -8.615850e-47 |
| Msa0108070 | Msa0693500 | 0.824506 | 7.777584e-54 | -8.615850e-47 |
| Msa0108070 | Msa0702200 | 0.810894 | 9.186218e-51 | -8.615850e-47 |
| Msa0108070 | Msa0705480 | -0.800871 | 1.175764e-48 | -8.615850e-47 |
| Msa0108070 | Msa0709660 | 0.834237 | 3.366379e-56 | -8.615850e-47 |
| Msa0108070 | Msa0740210 | 0.828563 | 8.384783e-55 | -8.615850e-47 |
| Msa0108070 | Msa0748330 | 0.860294 | 2.282749e-63 | -8.615850e-47 |
| Msa0108070 | Msa0749150 | 0.818488 | 1.909715e-52 | -8.615850e-47 |
| Msa0108070 | Msa0769830 | 0.802118 | 6.529466e-49 | -8.615850e-47 |
| Msa0108070 | Msa0775580 | 0.812771 | 3.584419e-51 | -8.615850e-47 |
| Msa0108070 | Msa0781390 | 0.829886 | 4.005020e-55 | -8.615850e-47 |
| Msa0108070 | Msa0786100 | 0.836704 | 8.007791e-57 | -8.615850e-47 |
| Msa0108070 | Msa0790640 | 0.834674 | 2.614677e-56 | -8.615850e-47 |
| Msa0108070 | Msa0792880 | 0.812810 | 3.515037e-51 | -8.615850e-47 |
| Msa0108070 | Msa0793100 | 0.816093 | 6.604730e-52 | -8.615850e-47 |
| Msa0108070 | Msa0806720 | 0.826522 | 2.589881e-54 | -8.615850e-47 |
| Msa0108070 | Msa0806760 | 0.824994 | 5.967912e-54 | -8.615850e-47 |
| Msa0108070 | Msa0812970 | 0.803382 | 3.580619e-49 | -8.615850e-47 |
| Msa0108070 | Msa0820520 | 0.811509 | 6.754966e-51 | -8.615850e-47 |
| Msa0108070 | Msa0828570 | 0.859394 | 4.263983e-63 | -8.615850e-47 |
| Msa0108070 | Msa0828900 | 0.812120 | 4.973997e-51 | -8.615850e-47 |
| Msa0108070 | Msa0853480 | 0.803107 | 4.082156e-49 | -8.615850e-47 |
| Msa0108070 | Msa0860920 | 0.834327 | 3.194985e-56 | -8.615850e-47 |
| Msa0108070 | Msa0879650 | 0.809550 | 1.790337e-50 | -8.615850e-47 |
| Msa0108070 | Msa0882700 | 0.833084 | 6.533488e-56 | -8.615850e-47 |
| Msa0108070 | Msa0893350 | 0.807844 | 4.144723e-50 | -8.615850e-47 |
| Msa0108070 | Msa0893360 | 0.800022 | 1.751536e-48 | -8.615850e-47 |
| Msa0108070 | Msa0899700 | 0.828797 | 7.364010e-55 | -8.615850e-47 |
| Msa0108070 | Msa0936650 | 0.808211 | 3.461597e-50 | -8.615850e-47 |
| Msa0108070 | Msa0936690 | 0.802813 | 4.695834e-49 | -8.615850e-47 |
| Msa0108070 | Msa0938420 | 0.807432 | 5.069041e-50 | -8.615850e-47 |
| Msa0108070 | Msa0944690 | 0.821373 | 4.178498e-53 | -8.615850e-47 |
| Msa0108070 | Msa0945960 | 0.807291 | 5.431357e-50 | -8.615850e-47 |
| Msa0108070 | Msa0956980 | 0.814319 | 1.636535e-51 | -8.615850e-47 |
| Msa0108070 | Msa0964680 | 0.811186 | 7.942137e-51 | -8.615850e-47 |
| Msa0108070 | Msa0968780 | 0.831846 | 1.324077e-55 | -8.615850e-47 |
| Msa0108070 | Msa0973890 | 0.820822 | 5.598702e-53 | -8.615850e-47 |
| Msa0108070 | Msa0984000 | 0.917915 | 2.962800e-86 | -8.615850e-47 |
| Msa0108070 | Msa1004210 | 0.814582 | 1.432006e-51 | -8.615850e-47 |
| Msa0108070 | Msa1036250 | 0.829524 | 4.906620e-55 | -8.615850e-47 |
| Msa0108070 | Msa1041080 | 0.806203 | 9.217453e-50 | -8.615850e-47 |
| Msa0108070 | Msa1046610 | 0.810785 | 9.698833e-51 | -8.615850e-47 |
| Msa0108070 | Msa1053690 | 0.808088 | 3.677225e-50 | -8.615850e-47 |
| Msa0108070 | Msa1055360 | 0.810375 | 1.189489e-50 | -8.615850e-47 |
| Msa0108070 | Msa1076520 | 0.842661 | 2.256394e-58 | -8.615850e-47 |
| Msa0108070 | Msa1080840 | 0.802458 | 5.556839e-49 | -8.615850e-47 |
| Msa0108070 | Msa1082150 | 0.889265 | 2.826847e-73 | -8.615850e-47 |
| Msa0108070 | Msa1118980 | 0.809817 | 1.568760e-50 | -8.615850e-47 |
| Msa0108070 | Msa1119570 | 0.812168 | 4.856545e-51 | -8.615850e-47 |
| Msa0108070 | Msa1120660 | 0.813754 | 2.180823e-51 | -8.615850e-47 |
| Msa0108070 | Msa1122720 | 0.810576 | 1.076252e-50 | -8.615850e-47 |
| Msa0108070 | Msa1125450 | 0.820097 | 8.213370e-53 | -8.615850e-47 |
| Msa0108070 | Msa1128650 | -0.829280 | 5.621771e-55 | -8.615850e-47 |
| Msa0108070 | Msa1131180 | -0.823507 | 1.334562e-53 | -8.615850e-47 |
| Msa0108070 | Msa1134560 | 0.817274 | 3.591032e-52 | -8.615850e-47 |
| Msa0108070 | Msa1137940 | 0.822594 | 2.179474e-53 | -8.615850e-47 |
| Msa0108070 | Msa1141250 | -0.823231 | 1.548638e-53 | -8.615850e-47 |
| Msa0108070 | Msa1144730 | 0.906867 | 9.373484e-81 | -8.615850e-47 |
| Msa0108070 | Msa1158090 | 0.814203 | 1.735941e-51 | -8.615850e-47 |
| Msa0108070 | Msa1164570 | 0.817550 | 3.111836e-52 | -8.615850e-47 |
| Msa0108070 | Msa1173380 | 0.895500 | 9.038824e-76 | -8.615850e-47 |
| Msa0108070 | Msa1177240 | 0.807750 | 4.340629e-50 | -8.615850e-47 |
| Msa0108070 | Msa1178120 | 0.843369 | 1.461826e-58 | -8.615850e-47 |
| Msa0108070 | Msa1180050 | 0.822778 | 1.974489e-53 | -8.615850e-47 |
| Msa0108070 | Msa1182800 | 0.863530 | 2.331416e-64 | -8.615850e-47 |
| Msa0108070 | Msa1182830 | 0.843118 | 1.705594e-58 | -8.615850e-47 |
| Msa0108070 | Msa1184010 | 0.816853 | 4.463367e-52 | -8.615850e-47 |
| Msa0108070 | Msa1193400 | 0.815632 | 8.369395e-52 | -8.615850e-47 |
| Msa0108070 | Msa1193430 | 0.807407 | 5.132562e-50 | -8.615850e-47 |
| Msa0108070 | Msa1204430 | 0.802248 | 6.139873e-49 | -8.615850e-47 |
| Msa0108070 | Msa1204980 | -0.802302 | 5.983590e-49 | -8.615850e-47 |
| Msa0108070 | Msa1205010 | -0.803315 | 3.695786e-49 | -8.615850e-47 |
| Msa0108070 | Msa1211390 | 0.816167 | 6.357621e-52 | -8.615850e-47 |
| Msa0108070 | Msa1222030 | -0.800444 | 1.437143e-48 | -8.615850e-47 |
| Msa0108070 | Msa1232270 | 0.828207 | 1.022262e-54 | -8.615850e-47 |
| Msa0108070 | Msa1237260 | 0.817107 | 3.913916e-52 | -8.615850e-47 |
| Msa0108070 | Msa1241820 | 0.831666 | 1.466685e-55 | -8.615850e-47 |
| Msa0108070 | Msa1243730 | 0.829647 | 4.579382e-55 | -8.615850e-47 |
| Msa0108070 | Msa1245120 | -0.843073 | 1.752912e-58 | -8.615850e-47 |
| Msa0108070 | Msa1249410 | 0.817175 | 3.779921e-52 | -8.615850e-47 |
| Msa0108070 | Msa1252300 | 0.848659 | 5.323639e-60 | -8.615850e-47 |
| Msa0108070 | Msa1256540 | -0.803823 | 2.900610e-49 | -8.615850e-47 |
| Msa0108070 | Msa1270770 | 0.815687 | 8.137203e-52 | -8.615850e-47 |
| Msa0108070 | Msa1272950 | 0.851961 | 6.309405e-61 | -8.615850e-47 |
| Msa0108070 | Msa1278420 | 0.824731 | 6.884404e-54 | -8.615850e-47 |
| Msa0108070 | Msa1281270 | 0.802441 | 5.601912e-49 | -8.615850e-47 |
| Msa0108070 | Msa1293050 | 0.808578 | 2.891330e-50 | -8.615850e-47 |
| Msa0108070 | Msa1296960 | -0.811852 | 5.688778e-51 | -8.615850e-47 |
| Msa0108070 | Msa1306190 | 0.819483 | 1.133988e-52 | -8.615850e-47 |
| Msa0108070 | Msa1306200 | 0.823947 | 1.052424e-53 | -8.615850e-47 |
| Msa0108070 | Msa1313050 | 0.822076 | 2.873723e-53 | -8.615850e-47 |
| Msa0108070 | Msa1317710 | 0.843149 | 1.673359e-58 | -8.615850e-47 |
| Msa0108070 | Msa1320380 | 0.811434 | 7.015906e-51 | -8.615850e-47 |
| Msa0108070 | Msa1326400 | 0.858985 | 5.653175e-63 | -8.615850e-47 |
| Msa0108070 | Msa1335970 | -0.803431 | 3.497815e-49 | -8.615850e-47 |
| Msa0108070 | Msa1349810 | 0.896364 | 3.960073e-76 | -8.615850e-47 |
| Msa0108070 | Msa1354090 | 0.869147 | 3.848712e-66 | -8.615850e-47 |
| Msa0108070 | Msa1358340 | 0.855140 | 7.702986e-62 | -8.615850e-47 |
| Msa0108070 | Msa1359620 | 0.816535 | 5.259233e-52 | -8.615850e-47 |
| Msa0108070 | Msa1359890 | 0.847310 | 1.253641e-59 | -8.615850e-47 |
| Msa0108070 | Msa1378470 | 0.810919 | 9.072825e-51 | -8.615850e-47 |
| Msa0108070 | Msa1386250 | 0.830123 | 3.506881e-55 | -8.615850e-47 |
| Msa0108070 | Msa1394900 | 0.845536 | 3.819423e-59 | -8.615850e-47 |
| Msa0108070 | Msa1403700 | 0.814904 | 1.214588e-51 | -8.615850e-47 |
| Msa0108070 | Msa1406020 | 0.860531 | 1.936307e-63 | -8.615850e-47 |
| Msa0108070 | Msa1420520 | 0.811388 | 7.178452e-51 | -8.615850e-47 |
| Msa0108070 | Msa1434660 | 0.890220 | 1.199204e-73 | -8.615850e-47 |
| Msa0108070 | Msa1443550 | 0.839263 | 1.759029e-57 | -8.615850e-47 |
| Msa0108070 | Msa1459540 | 0.843149 | 1.673717e-58 | -8.615850e-47 |
| Msa0108070 | Msa1460310 | -0.804257 | 2.356589e-49 | -8.615850e-47 |
| Msa0108070 | Msa1463560 | -0.807337 | 5.309331e-50 | -8.615850e-47 |
| Msa0108070 | Msa1466350 | 0.816258 | 6.067924e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108070 | MtrunA17_Chr1g0164721 | 94.340 | 477 | 27 | 0 | 1 | 477 | 1 | 477 | 0.0 | 934 |
| Msa0108070 | MtrunA17_Chr2g0319981 | 31.982 | 222 | 140 | 4 | 51 | 270 | 53 | 265 | 1.15e-29 | 118 |
| Msa0108070 | MtrunA17_Chr4g0041461 | 33.621 | 232 | 128 | 6 | 37 | 253 | 29 | 249 | 6.03e-29 | 116 |
| Msa0108070 | MtrunA17_Chr1g0164711 | 52.113 | 71 | 28 | 2 | 139 | 208 | 2 | 67 | 1.11e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0108070 | AT5G23240.1 | 52.093 | 430 | 192 | 5 | 53 | 475 | 37 | 459 | 2.73e-155 | 449 |
| Msa0108070 | AT2G42750.1 | 31.944 | 216 | 136 | 4 | 57 | 270 | 65 | 271 | 9.03e-29 | 116 |
Find 91 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGGATGAATGGAATTTA+AGG | 0.177418 | 1_3:+19407031 | None:intergenic |
| TGAAACAGTAGACATGTTTA+TGG | 0.185098 | 1_3:+19409927 | None:intergenic |
| CTGACATTCTTGATTCTCTT+TGG | 0.194662 | 1_3:+19407234 | None:intergenic |
| CAATTTCCAATTGGTTATAT+TGG | 0.206460 | 1_3:-19407193 | Msa0108070:CDS |
| TTTGACTTGTATGATCTTCT+AGG | 0.212676 | 1_3:-19409775 | Msa0108070:CDS |
| CCTGATATTGCTGGTCCTTC+TGG | 0.231877 | 1_3:-19409685 | Msa0108070:CDS |
| TCTCTTAGTTTACTAAGATT+TGG | 0.254346 | 1_3:+19407107 | None:intergenic |
| TTCGCGATAGAATCCGTTTA+TGG | 0.262210 | 1_3:-19408500 | Msa0108070:CDS |
| CCATTCATCCTGAGGAATAT+TGG | 0.276497 | 1_3:-19407022 | Msa0108070:CDS |
| ACTGGCAATCCCCATCTAAT+TGG | 0.277395 | 1_3:+19406867 | None:intergenic |
| GAGATCCAACCTTGCTGCTT+TGG | 0.303926 | 1_3:-19408146 | Msa0108070:CDS |
| ATGGTTTGAGTTTGAGAATA+AGG | 0.336019 | 1_3:+19409946 | None:intergenic |
| ATGAAAATAGTCCAATTAGA+TGG | 0.341134 | 1_3:-19406878 | Msa0108070:CDS |
| TTGGGGAGGTTCTCTAGCTT+TGG | 0.351415 | 1_3:-19406769 | Msa0108070:CDS |
| TGATGCTTATTCCATTCTTT+CGG | 0.356391 | 1_3:-19409638 | Msa0108070:CDS |
| AACCCTTGCTCTTCCATAAA+CGG | 0.370236 | 1_3:+19408487 | None:intergenic |
| CCAGAAGGACCAGCAATATC+AGG | 0.385817 | 1_3:+19409685 | None:intergenic |
| TGGTCCTTCTGGTCATGATA+TGG | 0.387346 | 1_3:-19409674 | Msa0108070:CDS |
| GATACATGTAATATGAAGTT+AGG | 0.400116 | 1_3:-19406592 | Msa0108070:three_prime_UTR |
| AAATTAATTAACCTTATCAT+AGG | 0.400387 | 1_3:+19409597 | None:intergenic |
| GAAGGAAGAACAGTAGTTGA+TGG | 0.402925 | 1_3:+19406996 | None:intergenic |
| GCAAATGAAGGCTTCTCAAT+TGG | 0.409144 | 1_3:+19406948 | None:intergenic |
| AGTTGAGTTGAAAGAGCATT+GGG | 0.412413 | 1_3:-19406787 | Msa0108070:CDS |
| TGGACATTGTTAACAGCTCC+TGG | 0.413707 | 1_3:-19406749 | Msa0108070:CDS |
| CCAGTGGTTACTTCATTGTT+CGG | 0.415606 | 1_3:-19406849 | Msa0108070:CDS |
| CGATGTCATCCTGATATTGC+TGG | 0.415641 | 1_3:-19409694 | Msa0108070:CDS |
| GAAGACCATTGTATTCAGTT+TGG | 0.420412 | 1_3:-19408613 | Msa0108070:CDS |
| TTCTTTCCTTTAGCAAATGA+AGG | 0.426387 | 1_3:+19406936 | None:intergenic |
| TTCACGCACCTGAGAATACT+TGG | 0.427085 | 1_3:+19407988 | None:intergenic |
| ACATTCTTGATTCTCTTTGG+AGG | 0.428803 | 1_3:+19407237 | None:intergenic |
| ACAGAATTCAAAGGCTTCAC+TGG | 0.429274 | 1_3:-19408635 | Msa0108070:CDS |
| GAGAAGCCTTCATTTGCTAA+AGG | 0.441147 | 1_3:-19406942 | Msa0108070:CDS |
| TCGATTTCTATTTCCAATGT+TGG | 0.441877 | 1_3:+19406662 | None:intergenic |
| CCAATATTCCTCAGGATGAA+TGG | 0.445444 | 1_3:+19407022 | None:intergenic |
| TCAGGATGAATGGAATTTAA+GGG | 0.445690 | 1_3:+19407032 | None:intergenic |
| TCATAGGCAAAACGAGCAAA+TGG | 0.458278 | 1_3:+19409613 | None:intergenic |
| GCAGCTACATGGTATATGAT+TGG | 0.462602 | 1_3:-19406708 | Msa0108070:CDS |
| TGAAAATAGTCCAATTAGAT+GGG | 0.463058 | 1_3:-19406877 | Msa0108070:CDS |
| CAATTAGATCAATTTCCAAT+TGG | 0.464945 | 1_3:-19407202 | Msa0108070:CDS |
| AGCAAATGGATCCGAAAGAA+TGG | 0.472626 | 1_3:+19409627 | None:intergenic |
| AAGGATTGTTGTCGAATTTG+TGG | 0.475083 | 1_3:-19406685 | Msa0108070:CDS |
| TTGAATTGCCTCATCAATTG+TGG | 0.477513 | 1_3:+19408439 | None:intergenic |
| TGAATTGCCTCATCAATTGT+GGG | 0.486266 | 1_3:+19408440 | None:intergenic |
| GGTTACTTCATTGTTCGGTA+TGG | 0.486681 | 1_3:-19406844 | Msa0108070:CDS |
| ACTTACGAAATGCAGTTGAC+AGG | 0.489446 | 1_3:+19408410 | None:intergenic |
| GAACTCCAAAGCAGCAAGGT+TGG | 0.505248 | 1_3:+19408141 | None:intergenic |
| CTCAAACATATTTGTAGATG+TGG | 0.509300 | 1_3:-19408053 | Msa0108070:CDS |
| CAGTTGAGTTGAAAGAGCAT+TGG | 0.510120 | 1_3:-19406788 | Msa0108070:CDS |
| GTAGTAGTACTAGTTGAAGA+AGG | 0.518499 | 1_3:+19406978 | None:intergenic |
| GTTGATGAAATAAAATGTGT+TGG | 0.520242 | 1_3:-19408557 | Msa0108070:CDS |
| TGGTTGCCAATATAACCAAT+TGG | 0.524255 | 1_3:+19407187 | None:intergenic |
| AGTTTACTAAGATTTGGATC+AGG | 0.528096 | 1_3:+19407113 | None:intergenic |
| AGCAAGGGTTGTTTCTCAGT+GGG | 0.533941 | 1_3:-19408474 | Msa0108070:CDS |
| AAAAGCTTCCAAGTATTCTC+AGG | 0.534346 | 1_3:-19407996 | Msa0108070:intron |
| GATGGAGTCCAATATTCCTC+AGG | 0.534720 | 1_3:+19407014 | None:intergenic |
| GTAGGTGCAAGTCATACAGC+AGG | 0.546276 | 1_3:-19408085 | Msa0108070:CDS |
| GTCGAATTTGTGGCCAACAT+TGG | 0.554187 | 1_3:-19406675 | Msa0108070:CDS |
| CTCCTGGTTGCAATATATGT+TGG | 0.560075 | 1_3:-19406733 | Msa0108070:CDS |
| CTTAAATTCCATTCATCCTG+AGG | 0.562233 | 1_3:-19407030 | Msa0108070:CDS |
| CTACATGGTATATGATTGGA+AGG | 0.563912 | 1_3:-19406704 | Msa0108070:CDS |
| GCAGTTAGATTACATGAAGT+AGG | 0.569974 | 1_3:-19406819 | Msa0108070:CDS |
| AATCCGTTTATGGAAGAGCA+AGG | 0.576566 | 1_3:-19408490 | Msa0108070:CDS |
| ATATGTTGGTAGCAGCTACA+TGG | 0.578806 | 1_3:-19406719 | Msa0108070:CDS |
| ATCCGTTTATGGAAGAGCAA+GGG | 0.583858 | 1_3:-19408489 | Msa0108070:CDS |
| TGGCAACCAAATAGAGCAAG+TGG | 0.586789 | 1_3:-19407173 | Msa0108070:CDS |
| CAGGATGAATGGAATTTAAG+GGG | 0.589018 | 1_3:+19407033 | None:intergenic |
| CCATTGTATTCAGTTTGGTG+TGG | 0.590749 | 1_3:-19408608 | Msa0108070:CDS |
| ACATATTTGTAGATGTGGAG+AGG | 0.591397 | 1_3:-19408048 | Msa0108070:CDS |
| CCACGTGGCAATGTAAGAGT+AGG | 0.594070 | 1_3:-19408103 | Msa0108070:CDS |
| GAATAAGGTGTGGCAGCAAG+AGG | 0.595766 | 1_3:+19409961 | None:intergenic |
| CTTACGAAATGCAGTTGACA+GGG | 0.598627 | 1_3:+19408411 | None:intergenic |
| GCAAAGATCACAGAATTCAA+AGG | 0.599426 | 1_3:-19408644 | Msa0108070:CDS |
| AATTAGATGGGGATTGCCAG+TGG | 0.600248 | 1_3:-19406865 | Msa0108070:CDS |
| TAGAAATCGATAGAACTACA+AGG | 0.621083 | 1_3:-19406649 | Msa0108070:exon |
| CCGAACAATGAAGTAACCAC+TGG | 0.630205 | 1_3:+19406849 | None:intergenic |
| GAGCAAGGGTTGTTTCTCAG+TGG | 0.633189 | 1_3:-19408475 | Msa0108070:CDS |
| GAGTTGAAAGAGCATTGGGG+AGG | 0.639356 | 1_3:-19406783 | Msa0108070:CDS |
| TTCTGAACCCACAATTGATG+AGG | 0.640325 | 1_3:-19408447 | Msa0108070:CDS |
| GAAAATAGTCCAATTAGATG+GGG | 0.640775 | 1_3:-19406876 | Msa0108070:CDS |
| ATAGCCATATCATGACCAGA+AGG | 0.649543 | 1_3:+19409670 | None:intergenic |
| TCAAGAACTCCAAAGCAGCA+AGG | 0.655263 | 1_3:+19408137 | None:intergenic |
| AGAAATCGATAGAACTACAA+GGG | 0.665756 | 1_3:-19406648 | Msa0108070:exon |
| AGGATGAATGGAATTTAAGG+GGG | 0.665984 | 1_3:+19407034 | None:intergenic |
| TGATCAGTCACAGATTAAGA+CGG | 0.667093 | 1_3:-19409737 | Msa0108070:CDS |
| TACCAACATATATTGCAACC+AGG | 0.682835 | 1_3:+19406731 | None:intergenic |
| CCACACCAAACTGAATACAA+TGG | 0.683154 | 1_3:+19408608 | None:intergenic |
| ATACAAGTCAAAATCCAACA+TGG | 0.696805 | 1_3:+19409786 | None:intergenic |
| GTTGAGTTGAAAGAGCATTG+GGG | 0.697316 | 1_3:-19406786 | Msa0108070:CDS |
| TTGATGTCGAAGCAGCCACG+TGG | 0.734249 | 1_3:-19408118 | Msa0108070:CDS |
| CCTACTCTTACATTGCCACG+TGG | 0.735405 | 1_3:+19408103 | None:intergenic |
| TTGAGTTTGAGAATAAGGTG+TGG | 0.756744 | 1_3:+19409951 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAACAAAATAACATTA+TGG | - | chr1_3:19407613-19407632 | Msa0108070:intron | 10.0% |
| !! | AAATTAATTAACCTTATCAT+AGG | + | chr1_3:19406909-19406928 | None:intergenic | 15.0% |
| !! | CAATTATAAACTAAAAAGAA+AGG | + | chr1_3:19406941-19406960 | None:intergenic | 15.0% |
| !!! | TTCTTTTTAGTTTATAATTG+TGG | - | chr1_3:19406941-19406960 | Msa0108070:CDS | 15.0% |
| !!! | CAATTTATAGTTCTAAATTA+AGG | - | chr1_3:19407023-19407042 | Msa0108070:CDS | 15.0% |
| !!! | GTTTCTATTTTAAGATTATA+AGG | - | chr1_3:19407358-19407377 | Msa0108070:intron | 15.0% |
| !! | AAAAACAGAAATTAAATAAG+AGG | - | chr1_3:19407473-19407492 | Msa0108070:intron | 15.0% |
| !!! | ATTGAATTCTTATTTGTTTT+TGG | - | chr1_3:19407795-19407814 | Msa0108070:intron | 15.0% |
| !!! | AATATAATAGTTTGCACAAT+TGG | - | chr1_3:19407433-19407452 | Msa0108070:intron | 20.0% |
| !! | TTTGTATAATGATATCTGAT+TGG | + | chr1_3:19407590-19407609 | None:intergenic | 20.0% |
| !! | ACAAATAAGAATTCAATTAG+AGG | + | chr1_3:19407792-19407811 | None:intergenic | 20.0% |
| !!! | ATTCTTATTTGTTTTTGGTT+TGG | - | chr1_3:19407800-19407819 | Msa0108070:intron | 20.0% |
| !! | AATTATTCAATGCATATACA+AGG | + | chr1_3:19408274-19408293 | None:intergenic | 20.0% |
| !!! | ATTGATTTTAGTATGTTTGA+AGG | - | chr1_3:19408587-19408606 | Msa0108070:CDS | 20.0% |
| !!! | TTTTGGAAATTTGAAGGTTT+TGG | + | chr1_3:19406626-19406645 | None:intergenic | 25.0% |
| !!! | TAGAAAAACAAGACTTGTTT+TGG | + | chr1_3:19406643-19406662 | None:intergenic | 25.0% |
| !!! | GATTTTAGCAAAATCAATTC+TGG | + | chr1_3:19407170-19407189 | None:intergenic | 25.0% |
| !!! | ATCTCATAGGATTTTTTGTA+TGG | - | chr1_3:19407203-19407222 | Msa0108070:CDS | 25.0% |
| ! | CAGTAAAATACAAGTAAACA+CGG | + | chr1_3:19407249-19407268 | None:intergenic | 25.0% |
| !! | ACTTAACAAAAGCACAAATT+TGG | + | chr1_3:19407320-19407339 | None:intergenic | 25.0% |
| !! | GTTGATGAAATAAAATGTGT+TGG | - | chr1_3:19407946-19407965 | Msa0108070:intron | 25.0% |
| ! | TGTATAAACTATTCTGTACT+TGG | - | chr1_3:19408129-19408148 | Msa0108070:CDS | 25.0% |
| !! | CTTGTGAGTTACTTAAATTT+TGG | - | chr1_3:19408160-19408179 | Msa0108070:intron | 25.0% |
| !!! | TGAATTTTTGGATTCACTTT+TGG | - | chr1_3:19408534-19408553 | Msa0108070:CDS | 25.0% |
| !!! | GAATTTTTGGATTCACTTTT+GGG | - | chr1_3:19408535-19408554 | Msa0108070:CDS | 25.0% |
| ! | TCAAGTTAGAATCAACATTA+AGG | + | chr1_3:19408635-19408654 | None:intergenic | 25.0% |
| ! | TTGAGTTAAAAGTGAGTTTA+TGG | + | chr1_3:19408773-19408792 | None:intergenic | 25.0% |
| ! | TCATATAAGCTATATGTTAG+CGG | - | chr1_3:19408937-19408956 | Msa0108070:intron | 25.0% |
| !!! | ATTCATGCTTTGAAGATTAA+GGG | + | chr1_3:19409192-19409211 | None:intergenic | 25.0% |
| !!! | AATTCATGCTTTGAAGATTA+AGG | + | chr1_3:19409193-19409212 | None:intergenic | 25.0% |
| ! | TAATTCACAGTGAAATAATG+AGG | + | chr1_3:19409216-19409235 | None:intergenic | 25.0% |
| ! | CAATTAGATCAATTTCCAAT+TGG | - | chr1_3:19409301-19409320 | Msa0108070:intron | 25.0% |
| ! | CAATTTCCAATTGGTTATAT+TGG | - | chr1_3:19409310-19409329 | Msa0108070:intron | 25.0% |
| ! | TCTCTTAGTTTACTAAGATT+TGG | + | chr1_3:19409399-19409418 | None:intergenic | 25.0% |
| ! | ATGAAAATAGTCCAATTAGA+TGG | - | chr1_3:19409625-19409644 | Msa0108070:CDS | 25.0% |
| ! | TGAAAATAGTCCAATTAGAT+GGG | - | chr1_3:19409626-19409645 | Msa0108070:CDS | 25.0% |
| ! | GATACATGTAATATGAAGTT+AGG | - | chr1_3:19409911-19409930 | Msa0108070:CDS | 25.0% |
| ! | ATGGTTTGAGTTTGAGAATA+AGG | + | chr1_3:19406560-19406579 | None:intergenic | 30.0% |
| TGAAACAGTAGACATGTTTA+TGG | + | chr1_3:19406579-19406598 | None:intergenic | 30.0% | |
| !!! | GACTTGTTTTGGAAATTTGA+AGG | + | chr1_3:19406632-19406651 | None:intergenic | 30.0% |
| ATACAAGTCAAAATCCAACA+TGG | + | chr1_3:19406720-19406739 | None:intergenic | 30.0% | |
| !! | TTTGACTTGTATGATCTTCT+AGG | - | chr1_3:19406728-19406747 | Msa0108070:CDS | 30.0% |
| TGATGCTTATTCCATTCTTT+CGG | - | chr1_3:19406865-19406884 | Msa0108070:CDS | 30.0% | |
| TCTATTACTCATGTCATGTA+TGG | - | chr1_3:19406981-19407000 | Msa0108070:CDS | 30.0% | |
| !!! | GTTTTAAAATTCTATGTCGC+TGG | - | chr1_3:19407077-19407096 | Msa0108070:CDS | 30.0% |
| ! | TCGTAAGATCGTACAATTTT+AGG | - | chr1_3:19407122-19407141 | Msa0108070:CDS | 30.0% |
| ! | CAGATTAAAGCTGTAGTTTT+AGG | - | chr1_3:19407521-19407540 | Msa0108070:intron | 30.0% |
| !! | TCAGATGGATTGATTTAACA+AGG | - | chr1_3:19407672-19407691 | Msa0108070:intron | 30.0% |
| CTGCTTGTAACTAAGAATTA+AGG | - | chr1_3:19407753-19407772 | Msa0108070:intron | 30.0% | |
| GCTTATAGTATGACAAAATG+TGG | - | chr1_3:19407825-19407844 | Msa0108070:intron | 30.0% | |
| CTCAAACATATTTGTAGATG+TGG | - | chr1_3:19408450-19408469 | Msa0108070:CDS | 30.0% | |
| TAACTCAAACACTTTCACAT+TGG | - | chr1_3:19408785-19408804 | Msa0108070:intron | 30.0% | |
| AAGCCTAAGCATAAAAAAAG+TGG | + | chr1_3:19408812-19408831 | None:intergenic | 30.0% | |
| !!! | TTTTATGCTTAGGCTTTGTT+TGG | - | chr1_3:19408816-19408835 | Msa0108070:intron | 30.0% |
| TATAGTCTAACGAAATATCG+AGG | + | chr1_3:19409016-19409035 | None:intergenic | 30.0% | |
| AAGTTATCCTAAAGAGCTTA+TGG | - | chr1_3:19409048-19409067 | Msa0108070:intron | 30.0% | |
| CTTATTTCCATAAGCTCTTT+AGG | + | chr1_3:19409058-19409077 | None:intergenic | 30.0% | |
| ! | ACAAAAGAACATCTCTTTTC+AGG | - | chr1_3:19409236-19409255 | Msa0108070:intron | 30.0% |
| ! | TTTTTACCACTTGCTCTATT+TGG | + | chr1_3:19409339-19409358 | None:intergenic | 30.0% |
| AGTTTACTAAGATTTGGATC+AGG | + | chr1_3:19409393-19409412 | None:intergenic | 30.0% | |
| TCAGGATGAATGGAATTTAA+GGG | + | chr1_3:19409474-19409493 | None:intergenic | 30.0% | |
| TTCTTTCCTTTAGCAAATGA+AGG | + | chr1_3:19409570-19409589 | None:intergenic | 30.0% | |
| GAAAATAGTCCAATTAGATG+GGG | - | chr1_3:19409627-19409646 | Msa0108070:CDS | 30.0% | |
| TCGATTTCTATTTCCAATGT+TGG | + | chr1_3:19409844-19409863 | None:intergenic | 30.0% | |
| TAGAAATCGATAGAACTACA+AGG | - | chr1_3:19409854-19409873 | Msa0108070:CDS | 30.0% | |
| AGAAATCGATAGAACTACAA+GGG | - | chr1_3:19409855-19409874 | Msa0108070:CDS | 30.0% | |
| TTGAGTTTGAGAATAAGGTG+TGG | + | chr1_3:19406555-19406574 | None:intergenic | 35.0% | |
| !! | AAGTTTTTCAGCATCCATGT+TGG | - | chr1_3:19406703-19406722 | Msa0108070:CDS | 35.0% |
| TGATCAGTCACAGATTAAGA+CGG | - | chr1_3:19406766-19406785 | Msa0108070:CDS | 35.0% | |
| AAGGTATGCAACTTCAATTG+CGG | - | chr1_3:19407042-19407061 | Msa0108070:CDS | 35.0% | |
| ATGACTCAAATCCAAGACAT+CGG | - | chr1_3:19407706-19407725 | Msa0108070:intron | 35.0% | |
| TAATCTCTTAACCGATGTCT+TGG | + | chr1_3:19407720-19407739 | None:intergenic | 35.0% | |
| GCAAAGATCACAGAATTCAA+AGG | - | chr1_3:19407859-19407878 | Msa0108070:intron | 35.0% | |
| GAAGACCATTGTATTCAGTT+TGG | - | chr1_3:19407890-19407909 | Msa0108070:intron | 35.0% | |
| ! | CAGCTAACAAAGCACATTTT+AGG | + | chr1_3:19407975-19407994 | None:intergenic | 35.0% |
| TGAATTGCCTCATCAATTGT+GGG | + | chr1_3:19408066-19408085 | None:intergenic | 35.0% | |
| TTGAATTGCCTCATCAATTG+TGG | + | chr1_3:19408067-19408086 | None:intergenic | 35.0% | |
| ACATATTTGTAGATGTGGAG+AGG | - | chr1_3:19408455-19408474 | Msa0108070:CDS | 35.0% | |
| AAAAGCTTCCAAGTATTCTC+AGG | - | chr1_3:19408507-19408526 | Msa0108070:CDS | 35.0% | |
| TGAAGGCTCTCGATTAAAAT+TGG | - | chr1_3:19408604-19408623 | Msa0108070:CDS | 35.0% | |
| AAAACAAGTTCGAACTTCGA+AGG | + | chr1_3:19408681-19408700 | None:intergenic | 35.0% | |
| !!! | GGACCACTTTTTTTATGCTT+AGG | - | chr1_3:19408806-19408825 | Msa0108070:intron | 35.0% |
| CTAACTCATCCTTACAAAAC+TGG | + | chr1_3:19408992-19409011 | None:intergenic | 35.0% | |
| !! | CAGTTTTGTAAGGATGAGTT+AGG | - | chr1_3:19408990-19409009 | Msa0108070:intron | 35.0% |
| ! | TTGAAGATTAAGGGCTTGTT+TGG | + | chr1_3:19409183-19409202 | None:intergenic | 35.0% |
| ACATTCTTGATTCTCTTTGG+AGG | + | chr1_3:19409269-19409288 | None:intergenic | 35.0% | |
| CTGACATTCTTGATTCTCTT+TGG | + | chr1_3:19409272-19409291 | None:intergenic | 35.0% | |
| TGGTTGCCAATATAACCAAT+TGG | + | chr1_3:19409319-19409338 | None:intergenic | 35.0% | |
| ! | ATTTAAGGGGGCTTTATGTT+TGG | + | chr1_3:19409460-19409479 | None:intergenic | 35.0% |
| AGGATGAATGGAATTTAAGG+GGG | + | chr1_3:19409472-19409491 | None:intergenic | 35.0% | |
| CAGGATGAATGGAATTTAAG+GGG | + | chr1_3:19409473-19409492 | None:intergenic | 35.0% | |
| CTCAGGATGAATGGAATTTA+AGG | + | chr1_3:19409475-19409494 | None:intergenic | 35.0% | |
| CTTAAATTCCATTCATCCTG+AGG | - | chr1_3:19409473-19409492 | Msa0108070:intron | 35.0% | |
| GTAGTAGTACTAGTTGAAGA+AGG | + | chr1_3:19409528-19409547 | None:intergenic | 35.0% | |
| GCAGTTAGATTACATGAAGT+AGG | - | chr1_3:19409684-19409703 | Msa0108070:CDS | 35.0% | |
| !! | AGTTGAGTTGAAAGAGCATT+GGG | - | chr1_3:19409716-19409735 | Msa0108070:CDS | 35.0% |
| TACCAACATATATTGCAACC+AGG | + | chr1_3:19409775-19409794 | None:intergenic | 35.0% | |
| CTACATGGTATATGATTGGA+AGG | - | chr1_3:19409799-19409818 | Msa0108070:CDS | 35.0% | |
| AAGGATTGTTGTCGAATTTG+TGG | - | chr1_3:19409818-19409837 | Msa0108070:CDS | 35.0% | |
| !!! | GAAGGTTTTGGAGTGAAGAA+AGG | + | chr1_3:19406614-19406633 | None:intergenic | 40.0% |
| ATAGCCATATCATGACCAGA+AGG | + | chr1_3:19406836-19406855 | None:intergenic | 40.0% | |
| AGCAAATGGATCCGAAAGAA+TGG | + | chr1_3:19406879-19406898 | None:intergenic | 40.0% | |
| TCATAGGCAAAACGAGCAAA+TGG | + | chr1_3:19406893-19406912 | None:intergenic | 40.0% | |
| ! | TGCTCGTTTTGCCTATGATA+AGG | - | chr1_3:19406895-19406914 | Msa0108070:CDS | 40.0% |
| AATCAATTCTGGACGCACAA+GGG | + | chr1_3:19407159-19407178 | None:intergenic | 40.0% | |
| AAATCAATTCTGGACGCACA+AGG | + | chr1_3:19407160-19407179 | None:intergenic | 40.0% | |
| GTGAGATTGTACGATCTCAT+AGG | - | chr1_3:19407190-19407209 | Msa0108070:CDS | 40.0% | |
| TGTAGAAGAGTCTAGTCAGA+TGG | - | chr1_3:19407657-19407676 | Msa0108070:intron | 40.0% | |
| AGTATGACAAAATGTGGTGC+AGG | - | chr1_3:19407831-19407850 | Msa0108070:intron | 40.0% | |
| ACAGAATTCAAAGGCTTCAC+TGG | - | chr1_3:19407868-19407887 | Msa0108070:intron | 40.0% | |
| CCACACCAAACTGAATACAA+TGG | + | chr1_3:19407898-19407917 | None:intergenic | 40.0% | |
| ! | CCATTGTATTCAGTTTGGTG+TGG | - | chr1_3:19407895-19407914 | Msa0108070:intron | 40.0% |
| TTCGCGATAGAATCCGTTTA+TGG | - | chr1_3:19408003-19408022 | Msa0108070:CDS | 40.0% | |
| AATCCGTTTATGGAAGAGCA+AGG | - | chr1_3:19408013-19408032 | Msa0108070:CDS | 40.0% | |
| ATCCGTTTATGGAAGAGCAA+GGG | - | chr1_3:19408014-19408033 | Msa0108070:CDS | 40.0% | |
| AACCCTTGCTCTTCCATAAA+CGG | + | chr1_3:19408019-19408038 | None:intergenic | 40.0% | |
| TTCTGAACCCACAATTGATG+AGG | - | chr1_3:19408056-19408075 | Msa0108070:CDS | 40.0% | |
| CTTACGAAATGCAGTTGACA+GGG | + | chr1_3:19408095-19408114 | None:intergenic | 40.0% | |
| ACTTACGAAATGCAGTTGAC+AGG | + | chr1_3:19408096-19408115 | None:intergenic | 40.0% | |
| TGTCTATGCAACAGCAATTG+AGG | + | chr1_3:19408232-19408251 | None:intergenic | 40.0% | |
| ! | TTCTCAGGTGCGTGAATTTT+TGG | - | chr1_3:19408522-19408541 | Msa0108070:CDS | 40.0% |
| GCTATATGTTAGCGGAAAAG+AGG | - | chr1_3:19408945-19408964 | Msa0108070:intron | 40.0% | |
| ATATGTTAGCGGAAAAGAGG+AGG | - | chr1_3:19408948-19408967 | Msa0108070:intron | 40.0% | |
| !! | CCTTACAAAACTGGCTTGTA+CGG | + | chr1_3:19408983-19409002 | None:intergenic | 40.0% |
| CCAATATTCCTCAGGATGAA+TGG | + | chr1_3:19409484-19409503 | None:intergenic | 40.0% | |
| CCATTCATCCTGAGGAATAT+TGG | - | chr1_3:19409481-19409500 | Msa0108070:intron | 40.0% | |
| GAAGGAAGAACAGTAGTTGA+TGG | + | chr1_3:19409510-19409529 | None:intergenic | 40.0% | |
| GCAAATGAAGGCTTCTCAAT+TGG | + | chr1_3:19409558-19409577 | None:intergenic | 40.0% | |
| ! | GAGAAGCCTTCATTTGCTAA+AGG | - | chr1_3:19409561-19409580 | Msa0108070:intron | 40.0% |
| CCAGTGGTTACTTCATTGTT+CGG | - | chr1_3:19409654-19409673 | Msa0108070:CDS | 40.0% | |
| GGTTACTTCATTGTTCGGTA+TGG | - | chr1_3:19409659-19409678 | Msa0108070:CDS | 40.0% | |
| !! | CAGTTGAGTTGAAAGAGCAT+TGG | - | chr1_3:19409715-19409734 | Msa0108070:CDS | 40.0% |
| !! | GTTGAGTTGAAAGAGCATTG+GGG | - | chr1_3:19409717-19409736 | Msa0108070:CDS | 40.0% |
| CTCCTGGTTGCAATATATGT+TGG | - | chr1_3:19409770-19409789 | Msa0108070:CDS | 40.0% | |
| !! | ATATGTTGGTAGCAGCTACA+TGG | - | chr1_3:19409784-19409803 | Msa0108070:CDS | 40.0% |
| GCAGCTACATGGTATATGAT+TGG | - | chr1_3:19409795-19409814 | Msa0108070:CDS | 40.0% | |
| CGATGTCATCCTGATATTGC+TGG | - | chr1_3:19406809-19406828 | Msa0108070:CDS | 45.0% | |
| TGGTCCTTCTGGTCATGATA+TGG | - | chr1_3:19406829-19406848 | Msa0108070:CDS | 45.0% | |
| ! | ATTCTATGTCGCTGGTGTCA+AGG | - | chr1_3:19407085-19407104 | Msa0108070:CDS | 45.0% |
| ATCAATTCTGGACGCACAAG+GGG | + | chr1_3:19407158-19407177 | None:intergenic | 45.0% | |
| !! | AGCAAGGGTTGTTTCTCAGT+GGG | - | chr1_3:19408029-19408048 | Msa0108070:CDS | 45.0% |
| TCAAGAACTCCAAAGCAGCA+AGG | + | chr1_3:19408369-19408388 | None:intergenic | 45.0% | |
| TTCACGCACCTGAGAATACT+TGG | + | chr1_3:19408518-19408537 | None:intergenic | 45.0% | |
| !! | CCGTACAAGCCAGTTTTGTA+AGG | - | chr1_3:19408980-19408999 | Msa0108070:intron | 45.0% |
| TGGCAACCAAATAGAGCAAG+TGG | - | chr1_3:19409330-19409349 | Msa0108070:intron | 45.0% | |
| GATGGAGTCCAATATTCCTC+AGG | + | chr1_3:19409492-19409511 | None:intergenic | 45.0% | |
| ACTGGCAATCCCCATCTAAT+TGG | + | chr1_3:19409639-19409658 | None:intergenic | 45.0% | |
| AATTAGATGGGGATTGCCAG+TGG | - | chr1_3:19409638-19409657 | Msa0108070:CDS | 45.0% | |
| CCGAACAATGAAGTAACCAC+TGG | + | chr1_3:19409657-19409676 | None:intergenic | 45.0% | |
| TGGACATTGTTAACAGCTCC+TGG | - | chr1_3:19409754-19409773 | Msa0108070:CDS | 45.0% | |
| GTCGAATTTGTGGCCAACAT+TGG | - | chr1_3:19409828-19409847 | Msa0108070:CDS | 45.0% | |
| GAATAAGGTGTGGCAGCAAG+AGG | + | chr1_3:19406545-19406564 | None:intergenic | 50.0% | |
| CCAGAAGGACCAGCAATATC+AGG | + | chr1_3:19406821-19406840 | None:intergenic | 50.0% | |
| CCTGATATTGCTGGTCCTTC+TGG | - | chr1_3:19406818-19406837 | Msa0108070:CDS | 50.0% | |
| !! | GAGCAAGGGTTGTTTCTCAG+TGG | - | chr1_3:19408028-19408047 | Msa0108070:CDS | 50.0% |
| ! | GAGATCCAACCTTGCTGCTT+TGG | - | chr1_3:19408357-19408376 | Msa0108070:intron | 50.0% |
| GAACTCCAAAGCAGCAAGGT+TGG | + | chr1_3:19408365-19408384 | None:intergenic | 50.0% | |
| CCTACTCTTACATTGCCACG+TGG | + | chr1_3:19408403-19408422 | None:intergenic | 50.0% | |
| CCACGTGGCAATGTAAGAGT+AGG | - | chr1_3:19408400-19408419 | Msa0108070:intron | 50.0% | |
| GTAGGTGCAAGTCATACAGC+AGG | - | chr1_3:19408418-19408437 | Msa0108070:CDS | 50.0% | |
| !! | GAGTTGAAAGAGCATTGGGG+AGG | - | chr1_3:19409720-19409739 | Msa0108070:CDS | 50.0% |
| ! | TTGGGGAGGTTCTCTAGCTT+TGG | - | chr1_3:19409734-19409753 | Msa0108070:CDS | 50.0% |
| TTGATGTCGAAGCAGCCACG+TGG | - | chr1_3:19408385-19408404 | Msa0108070:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 19406523 | 19410002 | 19406523 | ID=Msa0108070;Name=Msa0108070 |
| chr1_3 | mRNA | 19406523 | 19410002 | 19406523 | ID=Msa0108070-mRNA-1;Parent=Msa0108070;Name=Msa0108070-mRNA-1;_AED=0.10;_eAED=0.10;_QI=7|1|1|1|1|1|4|136|477 |
| chr1_3 | exon | 19406523 | 19407267 | 19406523 | ID=Msa0108070-mRNA-1:exon:7017;Parent=Msa0108070-mRNA-1 |
| chr1_3 | exon | 19407997 | 19408177 | 19407997 | ID=Msa0108070-mRNA-1:exon:7016;Parent=Msa0108070-mRNA-1 |
| chr1_3 | exon | 19408416 | 19408672 | 19408416 | ID=Msa0108070-mRNA-1:exon:7015;Parent=Msa0108070-mRNA-1 |
| chr1_3 | exon | 19409609 | 19410002 | 19409609 | ID=Msa0108070-mRNA-1:exon:7014;Parent=Msa0108070-mRNA-1 |
| chr1_3 | five_prime_UTR | 19409996 | 19410002 | 19409996 | ID=Msa0108070-mRNA-1:five_prime_utr;Parent=Msa0108070-mRNA-1 |
| chr1_3 | CDS | 19409609 | 19409995 | 19409609 | ID=Msa0108070-mRNA-1:cds;Parent=Msa0108070-mRNA-1 |
| chr1_3 | CDS | 19408416 | 19408672 | 19408416 | ID=Msa0108070-mRNA-1:cds;Parent=Msa0108070-mRNA-1 |
| chr1_3 | CDS | 19407997 | 19408177 | 19407997 | ID=Msa0108070-mRNA-1:cds;Parent=Msa0108070-mRNA-1 |
| chr1_3 | CDS | 19406659 | 19407267 | 19406659 | ID=Msa0108070-mRNA-1:cds;Parent=Msa0108070-mRNA-1 |
| chr1_3 | three_prime_UTR | 19406523 | 19406658 | 19406523 | ID=Msa0108070-mRNA-1:three_prime_utr;Parent=Msa0108070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
